F113292

General Info

Members Datasets Scaffolds Average Seq Length
122 95 122 154

Family's Representative Sequence

Representative Sequence 3300005444|Ga0070694_100932407|Ga0070694_1009324071
Length 175
Sequence VTRHSPAVGQPPVTIEGMTEAMIDKLRAIGLRLDRSGTFWHDGTAVTHPRLRRALLRWLDVRADGRDIVRLDDRRYAYVEIEDAHLRARSAHWVGDRCFVLWDDDRESELDYGSMRQAADHALYVRIGDRLRGRIAGPAYHAVAEHIVETPETLEAPAGFALTAAGQSWPIVDAA

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
26 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
27 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
39 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
40 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
41 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
42 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
43 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
44 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
45 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
46 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
47 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
48 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
49 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
50 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
51 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
52 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
53 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
54 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
59 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
60 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
61 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
62 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
63 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
64 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
70 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
71 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
72 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
73 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
74 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
77 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
78 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
79 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
80 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
81 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
82 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
83 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
84 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
85 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
86 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
87 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
88 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
89 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
90 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
91 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
92 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
93 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
94 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
95 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.85
Nodule 0
Rhizoplane 0.82
Rhizosphere 68.03
Stem 0
Stem Tuber 0
Unclassified 12.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100195211 3300005329 Bacteria 1922
2 Ga0070670_101231637 3300005331 Unclassified 684
3 Ga0068869_100028220 3300005334 Bacteria 3920
4 Ga0068869_101700045 3300005334 Unclassified 563
5 Ga0070682_100436645 3300005337 Bacteria 999
6 Ga0068868_100283452 3300005338 Bacteria 1403
7 Ga0070689_100002190 3300005340 Bacteria 12667
8 Ga0070689_100114441 3300005340 Bacteria 2149
9 Ga0070687_100052431 3300005343 Bacteria 2117
10 Ga0070687_100180368 3300005343 Bacteria 1264
11 Ga0070687_100258262 3300005343 Bacteria 1086
12 Ga0070688_100400955 3300005365 Bacteria 1015
13 Ga0070667_101093557 3300005367 Unclassified 745
14 Ga0070705_100434388 3300005440 Bacteria 981
15 Ga0070694_100138524 3300005444 Bacteria 1765
16 Ga0070694_100932407 3300005444 Bacteria 718
17 Ga0070708_100325396 3300005445 Unclassified 1448
18 Ga0070681_10217332 3300005458 Bacteria 1827
19 Ga0070698_100001491 3300005471 Bacteria 25994
20 Ga0070679_100070107 3300005530 Bacteria 3497
21 Ga0068856_100181714 3300005614 Bacteria 2116
22 Ga0068861_100234776 3300005719 Bacteria 1557
23 Ga0068858_101372078 3300005842 Bacteria 696
24 Ga0070717_10008272 3300006028 Bacteria 7765
25 Ga0070717_10028906 3300006028 Bacteria 4442
26 Ga0075429_100090704 3300006880 Unclassified 2665
27 Ga0097620_100697252 3300006931 Unclassified 1106
28 Ga0105240_11567145 3300009093 Unclassified 690
29 Ga0105242_10570803 3300009176 Bacteria 1088
30 Ga0105249_10099491 3300009553 Bacteria 2733
31 Ga0105249_10881202 3300009553 Bacteria 961
32 Ga0157376_11026638 3300014969 Unclassified 848
33 Ga0163161_11221325 3300017792 Archaea 651
34 Ga0207705_10326373 3300025909 Bacteria 1180
35 Ga0207693_10809438 3300025915 Bacteria 722
36 Ga0207662_10077403 3300025918 Bacteria 2023
37 Ga0207662_10176376 3300025918 Bacteria 1373
38 Ga0207650_11020393 3300025925 Bacteria 704
39 Ga0207670_10035567 3300025936 Bacteria 3231
40 Ga0207670_10656361 3300025936 Bacteria 865
41 Ga0207704_10559801 3300025938 Bacteria 930
42 Ga0207689_10030016 3300025942 Bacteria 4533
43 Ga0207689_10069296 3300025942 Bacteria 2898
44 Ga0207712_10039245 3300025961 Bacteria 3243
45 Ga0207658_11046121 3300025986 Unclassified 745
46 Ga0207674_10054649 3300026116 Bacteria 4065
47 Ga0207675_100203081 3300026118 Bacteria 1904
48 Ga0307517_10209066 3300028786 Bacteria 1205
49 Ga0307515_10066444 3300028794 Bacteria 4996
50 Ga0265338_10204520 3300028800 Unclassified 1486
51 Ga0265338_10331396 3300028800 Bacteria 1099
52 Ga0265320_10273753 3300031240 Bacteria 748
53 Ga0307513_10012221 3300031456 Bacteria 10616
54 Ga0307513_10076323 3300031456 Bacteria 3476
55 Ga0307509_10000116 3300031507 Bacteria 116150
56 Ga0307509_10003127 3300031507 Bacteria 25689
57 Ga0307509_10030083 3300031507 Bacteria 6012
58 Ga0307509_10109884 3300031507 Bacteria 2765
59 Ga0307509_10306799 3300031507 Bacteria 1332
60 Ga0307508_10076266 3300031616 Bacteria 2930
61 Ga0307508_10202604 3300031616 Bacteria 1585
62 Ga0265314_10121013 3300031711 Bacteria 1648
63 Ga0307516_10093770 3300031730 Bacteria 2827
64 Ga0307406_10717176 3300031901 Bacteria 836
65 Ga0307415_100136530 3300032126 Bacteria 1866
66 Ga0307415_100152138 3300032126 Bacteria 1782
67 Ga0307507_10318518 3300033179 Bacteria 938
68 Ga0373936_0000027 3300035113 Bacteria 119134
69 Ga0373939_0065559 3300035114 Bacteria 1169
70 Ga0373956_0457464 3300035119 Bacteria 609
71 Ga0373961_0000216 3300035241 Bacteria 27259
72 Ga0395899_0232809 3300037312 Bacteria 1271
73 Ga0395900_0271135 3300037418 Bacteria 1692
74 Ga0395900_0549759 3300037418 Bacteria 1099
75 Ga0395905_0085688 3300037471 Bacteria 2952
76 Ga0436365_0703977 3300039437 Bacteria 1030
77 Ga0436365_1809062 3300039437 Bacteria 631
78 Ga0436362_1136693 3300039453 Bacteria 757
79 Ga0451793_0490290 3300041452 Unclassified 682
80 Ga0495650_0107437 3300046471 Bacteria 1040
81 Ga0495649_0199398 3300046694 Bacteria 1040
82 Ga0495686_0010287 3300047472 Bacteria 6663
83 Ga0495686_0416606 3300047472 Archaea 718
84 Ga0501296_057402 3300049519 Unclassified 582
85 Ga0501033_0569823 3300049570 Unclassified 779
86 Ga0501034_0504671 3300049571 Bacteria 1123
87 Ga0501036_0169477 3300049572 Bacteria 1840
88 Ga0501046_0350994 3300049580 Bacteria 1071
89 Ga0501047_0156252 3300049581 Bacteria 2154
90 Ga0501047_0458585 3300049581 Bacteria 1103
91 Ga0501070_0305717 3300049586 Bacteria 1295
92 Ga0501071_0500804 3300049587 Bacteria 932
93 Ga0501073_0671188 3300049589 Bacteria 715
94 Ga0501074_0464511 3300049590 Bacteria 897
95 Ga0501259_059584 3300049688 Unclassified 795
96 Ga0501267_018556 3300049764 Bacteria 754
97 Ga0501044_0033440 3300049823 Bacteria 5404
98 nmdc:mga09592_23686_c1 3300050508 Bacteria 5071
99 nmdc:mga0n895_678680_c1 3300050512 Bacteria 1027
100 Ga0500583_0319637 3300053092 Bacteria 757
101 Ga0500566_0014574 3300053094 Bacteria 4619
102 Ga0500566_0027521 3300053094 Bacteria 3328
103 Ga0500566_0117746 3300053094 Unclassified 1436
104 Ga0500640_004811 3300053095 Bacteria 4954
105 Ga0500554_035463 3300053102 Bacteria 1500
106 Ga0500562_115733 3300053108 Unclassified 730
107 Ga0500572_017318 3300053111 Unclassified 1850
108 Ga0500595_000057 3300053119 Bacteria 82395
109 Ga0500597_010465 3300053120 Bacteria 3313
110 Ga0500597_371717 3300053120 Bacteria 551
111 Ga0500607_218819 3300053121 Bacteria 796
112 Ga0500614_001080 3300053123 Bacteria 6756
113 Ga0500642_0039074 3300053130 Bacteria 2038
114 Ga0500642_0183622 3300053130 Bacteria 977
115 Ga0500559_0309372 3300053136 Bacteria 741
116 Ga0500585_059457 3300053144 Unclassified 1373
117 Ga0500588_0181961 3300053146 Unclassified 773
118 Ga0500603_056927 3300053150 Unclassified 1084
119 Ga0500622_0130622 3300053156 Bacteria 1208
120 Ga0500639_129515 3300053163 Bacteria 1198
121 Ga0500636_0239498 3300053177 Bacteria 933
122 Ga0500636_0350731 3300053177 Unclassified 704

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025938 Ga0207704_10559801 Ga0207704_105598011 125
2 3300025936 Ga0207670_10656361 Ga0207670_106563612 126
3 3300005842 Ga0068858_101372078 Ga0068858_1013720781 133
4 3300025961 Ga0207712_10039245 Ga0207712_100392453 133
5 3300053130 Ga0500642_0183622 Ga0500642_0183622_97_585 134
6 3300035241 Ga0373961_0000216 Ga0373961_0000216_4328_4867 135
7 3300017792 Ga0163161_11221325 Ga0163161_112213252 141
8 3300005458 Ga0070681_10217332 Ga0070681_102173322 142
9 3300005530 Ga0070679_100070107 Ga0070679_1000701074 142
10 3300026116 Ga0207674_10054649 Ga0207674_100546493 142
11 3300005338 Ga0068868_100283452 Ga0068868_1002834521 143
12 3300009553 Ga0105249_10099491 Ga0105249_100994912 143
13 3300031901 Ga0307406_10717176 Ga0307406_107171762 143
14 3300032126 Ga0307415_100136530 Ga0307415_1001365302 143
15 3300032126 Ga0307415_100152138 Ga0307415_1001521383 143
16 3300039437 Ga0436365_0703977 Ga0436365_0703977_12_446 143
17 3300047472 Ga0495686_0416606 Ga0495686_0416606_183_635 143
18 3300053146 Ga0500588_0181961 Ga0500588_0181961_34_522 145
19 3300005343 Ga0070687_100180368 Ga0070687_1001803682 146
20 3300005367 Ga0070667_101093557 Ga0070667_1010935571 146
21 3300006028 Ga0070717_10008272 Ga0070717_100082726 146
22 3300014969 Ga0157376_11026638 Ga0157376_110266381 146
23 3300025918 Ga0207662_10176376 Ga0207662_101763762 146
24 3300025986 Ga0207658_11046121 Ga0207658_110461211 146
25 3300006028 Ga0070717_10028906 Ga0070717_100289064 147
26 3300028794 Ga0307515_10066444 Ga0307515_100664445 147
27 3300028786 Ga0307517_10209066 Ga0307517_102090662 148
28 3300053092 Ga0500583_0319637 Ga0500583_0319637_273_737 148
29 3300053108 Ga0500562_115733 Ga0500562_115733_236_700 148
30 3300053156 Ga0500622_0130622 Ga0500622_0130622_24_488 148
31 3300031507 Ga0307509_10000116 Ga0307509_1000011651 150
32 3300031730 Ga0307516_10093770 Ga0307516_100937702 150
33 3300035113 Ga0373936_0000027 Ga0373936_0000027_113650_114105 150
34 3300053094 Ga0500566_0014574 Ga0500566_0014574_3614_4072 150
35 3300053094 Ga0500566_0027521 Ga0500566_0027521_2353_2808 150
36 3300053095 Ga0500640_004811 Ga0500640_004811_2516_2971 150
37 3300053102 Ga0500554_035463 Ga0500554_035463_476_931 150
38 3300053111 Ga0500572_017318 Ga0500572_017318_1216_1671 150
39 3300053119 Ga0500595_000057 Ga0500595_000057_38629_39084 150
40 3300053120 Ga0500597_371717 Ga0500597_371717_65_523 150
41 3300053121 Ga0500607_218819 Ga0500607_218819_44_499 150
42 3300053123 Ga0500614_001080 Ga0500614_001080_3989_4444 150
43 3300053130 Ga0500642_0039074 Ga0500642_0039074_522_977 150
44 3300053136 Ga0500559_0309372 Ga0500559_0309372_244_699 150
45 3300053144 Ga0500585_059457 Ga0500585_059457_376_834 150
46 3300053150 Ga0500603_056927 Ga0500603_056927_535_993 150
47 3300053163 Ga0500639_129515 Ga0500639_129515_131_589 150
48 3300053177 Ga0500636_0239498 Ga0500636_0239498_279_734 150
49 3300009176 Ga0105242_10570803 Ga0105242_105708032 151
50 3300025909 Ga0207705_10326373 Ga0207705_103263732 151
51 3300028800 Ga0265338_10204520 Ga0265338_102045201 151
52 3300031507 Ga0307509_10306799 Ga0307509_103067992 151
53 3300031616 Ga0307508_10202604 Ga0307508_102026042 151
54 3300047472 Ga0495686_0010287 Ga0495686_0010287_3417_3962 151
55 3300005337 Ga0070682_100436645 Ga0070682_1004366452 152
56 3300005343 Ga0070687_100052431 Ga0070687_1000524313 152
57 3300005614 Ga0068856_100181714 Ga0068856_1001817144 152
58 3300006880 Ga0075429_100090704 Ga0075429_1000907043 152
59 3300009093 Ga0105240_11567145 Ga0105240_115671452 152
60 3300028800 Ga0265338_10331396 Ga0265338_103313961 152
61 3300031240 Ga0265320_10273753 Ga0265320_102737532 152
62 3300031456 Ga0307513_10012221 Ga0307513_100122218 152
63 3300031507 Ga0307509_10003127 Ga0307509_1000312724 152
64 3300031711 Ga0265314_10121013 Ga0265314_101210132 152
65 3300039437 Ga0436365_1809062 Ga0436365_1809062_143_607 152
66 3300039453 Ga0436362_1136693 Ga0436362_1136693_54_515 152
67 3300041452 Ga0451793_0490290 Ga0451793_0490290_165_638 152
68 3300046471 Ga0495650_0107437 Ga0495650_0107437_114_575 152
69 3300046694 Ga0495649_0199398 Ga0495649_0199398_496_1008 152
70 3300049764 Ga0501267_018556 Ga0501267_018556_23_493 152
71 3300050508 nmdc:mga09592_23686_c1 nmdc:mga09592_23686_c1_735_1202 152
72 3300005329 Ga0070683_100195211 Ga0070683_1001952113 153
73 3300005331 Ga0070670_101231637 Ga0070670_1012316372 153
74 3300005334 Ga0068869_100028220 Ga0068869_1000282202 153
75 3300005334 Ga0068869_101700045 Ga0068869_1017000451 153
76 3300005340 Ga0070689_100002190 Ga0070689_1000021901 153
77 3300005340 Ga0070689_100114441 Ga0070689_1001144414 153
78 3300005343 Ga0070687_100258262 Ga0070687_1002582621 153
79 3300005365 Ga0070688_100400955 Ga0070688_1004009552 153
80 3300005440 Ga0070705_100434388 Ga0070705_1004343882 153
81 3300005444 Ga0070694_100138524 Ga0070694_1001385243 153
82 3300005444 Ga0070694_100932407 Ga0070694_1009324071 153
83 3300005445 Ga0070708_100325396 Ga0070708_1003253963 153
84 3300005471 Ga0070698_100001491 Ga0070698_10000149119 153
85 3300005719 Ga0068861_100234776 Ga0068861_1002347763 153
86 3300006931 Ga0097620_100697252 Ga0097620_1006972521 153
87 3300009553 Ga0105249_10881202 Ga0105249_108812022 153
88 3300025915 Ga0207693_10809438 Ga0207693_108094382 153
89 3300025918 Ga0207662_10077403 Ga0207662_100774032 153
90 3300025925 Ga0207650_11020393 Ga0207650_110203932 153
91 3300025936 Ga0207670_10035567 Ga0207670_100355673 153
92 3300025942 Ga0207689_10030016 Ga0207689_100300165 153
93 3300025942 Ga0207689_10069296 Ga0207689_100692962 153
94 3300026118 Ga0207675_100203081 Ga0207675_1002030812 153
95 3300031456 Ga0307513_10076323 Ga0307513_100763233 153
96 3300031507 Ga0307509_10030083 Ga0307509_100300835 153
97 3300031507 Ga0307509_10109884 Ga0307509_101098842 153
98 3300031616 Ga0307508_10076266 Ga0307508_100762663 153
99 3300033179 Ga0307507_10318518 Ga0307507_103185181 153
100 3300035114 Ga0373939_0065559 Ga0373939_0065559_318_797 153
101 3300035119 Ga0373956_0457464 Ga0373956_0457464_99_584 153
102 3300037312 Ga0395899_0232809 Ga0395899_0232809_437_901 153
103 3300037418 Ga0395900_0271135 Ga0395900_0271135_726_1190 153
104 3300037418 Ga0395900_0549759 Ga0395900_0549759_417_881 153
105 3300037471 Ga0395905_0085688 Ga0395905_0085688_1353_1817 153
106 3300049519 Ga0501296_057402 Ga0501296_057402_21_485 153
107 3300049570 Ga0501033_0569823 Ga0501033_0569823_38_502 153
108 3300049571 Ga0501034_0504671 Ga0501034_0504671_510_974 153
109 3300049572 Ga0501036_0169477 Ga0501036_0169477_730_1194 153
110 3300049580 Ga0501046_0350994 Ga0501046_0350994_486_950 153
111 3300049581 Ga0501047_0156252 Ga0501047_0156252_974_1438 153
112 3300049581 Ga0501047_0458585 Ga0501047_0458585_622_1086 153
113 3300049586 Ga0501070_0305717 Ga0501070_0305717_375_839 153
114 3300049587 Ga0501071_0500804 Ga0501071_0500804_211_675 153
115 3300049589 Ga0501073_0671188 Ga0501073_0671188_117_581 153
116 3300049590 Ga0501074_0464511 Ga0501074_0464511_150_614 153
117 3300049688 Ga0501259_059584 Ga0501259_059584_188_652 153
118 3300049823 Ga0501044_0033440 Ga0501044_0033440_140_604 153
119 3300050512 nmdc:mga0n895_678680_c1 nmdc:mga0n895_678680_c1_464_943 153
120 3300053094 Ga0500566_0117746 Ga0500566_0117746_85_717 153
121 3300053120 Ga0500597_010465 Ga0500597_010465_547_1035 153
122 3300053177 Ga0500636_0350731 Ga0500636_0350731_175_663 153

Structural Annotation

Top 5 Hits

ID Description Score Start End
2re3-assembly1.cif.gz_A crystal structure of a duf1285 family protein (spo_0140) from silicibacter pomeroyi dss-3 at 2.50 a resolution 0.8325 14 151
3n6w-assembly1.cif.gz_A-2 crystal structure of human gamma-butyrobetaine hydroxylase 0.7949 73 94
2ra9-assembly1.cif.gz_A crystal structure of a duf1285 family protein (sbal_2486) from shewanella baltica os155 at 1.40 a resolution 0.793 12 130
5xgv-assembly1.cif.gz_B-2 the structure of diels-alderase pyre3 in the biosynthetic pathway of pyrroindomycins 0.7551 64 94
2re3-assembly1.cif.gz_A crystal structure of a duf1285 family protein (spo_0140) from silicibacter pomeroyi dss-3 at 2.50 a resolution 0.7549 14 151
ID Description Score Start End Superfamily
2re3B01 Alpha Beta;Roll;duf1285 like fold;duf1285 like domain 0.8368 17 68 3.10.540.10
af_P54039_121_180_2.40.50.740 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Ribosomal protein S4, central domain 0.806 71 96 2.40.50.740
af_Q91ZW6_43_137_3.30.2020.30 Alpha Beta;2-Layer Sandwich;NE0471 N-terminal domain-like; 0.8014 71 96 3.30.2020.30
af_A0A1D6NEU5_50_369_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7928 73 94 2.130.10.10
2ra9A01 Alpha Beta;Roll;duf1285 like fold;duf1285 like domain 0.7862 12 67 3.10.540.10
ID Description Score Start End GO Terms
AF-A0A7W0ZW00-F1-model_v4 DUF1285 domain-containing protein 0.9249 1 153
AF-A0A3M2DMC9-F1-model_v4 DUF1285 domain-containing protein 0.923 6 152
AF-A0A150PRB1-F1-model_v4 Uncharacterized protein 0.9228 71 151
AF-A0A7W0ZW00-F1-model_v4 DUF1285 domain-containing protein 0.9189 1 153
AF-A0A534RNQ7-F1-model_v4 DUF1285 domain-containing protein 0.9128 12 69

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pLDDT pTM Quality
91.3 0.82 High
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Predicted Structure (AlphaFold2)

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