F108097

General Info

Members Datasets Scaffolds Average Seq Length
120 106 240 430

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862507626|2862510029
Length 484
Sequence LPSTEPGTEHSGVPRGPGRDLCAAGAAVLLVTTAVLVGRHIQGTSRTLFADWPPLLASWNPHLGPGTPAAVLVAIATVAYGPVLAARLPWRALLPLTWGTATAWTCSLALVDGWQRGIAGRLTTPHEYLQVIDRFHDIPAALRGFTRHILLGSPDHWPAHIAGHPPAATLTFVLLDRIGLRGGGWAGMWCITVGATACVAVLVAVRALAGERLARGAAPFVVLAPAAVWMGTSADAYFAAVAAWAVALLALAVTGRSPWWAGASGLLFGLACYLSYGLTLVALIAAAVMVLGRHGIRGRPALLVPLLAGLAVVPTAFTLAGFDWWEAYRLLVTRYHQGVGGIRPYGYWVWANLACTVLVTGLATAAGLRRTGAVLLRRRRGGTGQAAEARLALLVSAALIALLIADLSGMSKAETERIWLPFTLWLLPACAFLTLPRASGSSPKFSTLLEQGGPPRAGGPPVRAWLTAQALLALLLNHLLLTRW

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
10 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
11 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
12 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
13 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
14 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
20 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
21 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
22 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
23 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
24 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
25 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
26 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
27 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
28 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
29 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
30 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
31 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
32 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
33 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
34 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
35 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
36 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
37 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
38 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
39 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
40 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
41 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
42 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
43 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
44 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
45 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
46 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
47 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
48 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
49 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
50 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
51 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
52 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
53 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
54 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
55 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
56 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
57 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
58 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
59 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
60 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
61 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
62 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
63 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
64 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
65 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
69 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
70 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
71 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
72 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
73 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
74 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
75 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
76 2643221714 Streptomyces sp. Root264 Isolate Unclassified
77 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
78 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
79 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
80 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
81 2808606448 Streptomyces sp. 193411 Isolate Unclassified
82 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
83 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
84 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
85 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
86 2862574272 Streptomyces sp. AcE210 Isolate Nodule
87 2867369537 Streptomyces sp. Z26 Isolate Unclassified
88 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
89 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
90 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
91 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
92 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
93 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
94 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
95 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
96 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
97 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
98 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
99 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
100 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
101 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
102 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
103 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
104 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
105 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
106 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 69.17
Metatranscriptomes 1.67
Isolates 29.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.67
Nodule 0.83
Rhizoplane 0.83
Rhizosphere 69.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10002893 3300003316 Bacteria 1883
2 rootH2_10223963 3300003320 Bacteria 1791
3 rootH1_10055193 3300003323 Bacteria 1881
4 JGI25160J50197_1000478 3300003354 Bacteria 24322
5 JGI25160J50197_1006216 3300003354 Bacteria 4859
6 JGI25160J50197_1012281 3300003354 Bacteria 2983
7 Ga0006562J51391_1132570 3300003578 Bacteria 3322
8 Ga0006562J51391_1132571 3300003578 Bacteria 2730
9 Ga0070668_100087199 3300005347 Bacteria 2456
10 Ga0070667_100121955 3300005367 Bacteria 2268
11 Ga0068856_100084798 3300005614 Bacteria 3147
12 Ga0068860_100087050 3300005843 Bacteria 2974
13 Ga0075367_10002689 3300006178 Bacteria 8195
14 Ga0182007_10008349 3300015262 Bacteria 4260
15 Ga0183367_1008 3300015688 Bacteria 490626
16 Ga0207426_1000249 3300025302 Bacteria 118553
17 Ga0207426_1000488 3300025302 Bacteria 59803
18 Ga0207426_1006445 3300025302 Bacteria 5111
19 Ga0207647_10013905 3300025904 Bacteria 5571
20 Ga0207668_10082210 3300025972 Bacteria 2339
21 Ga0207658_10062000 3300025986 Bacteria 2797
22 Ga0207703_10024656 3300026035 Bacteria 4732
23 Ga0207675_100140120 3300026118 Bacteria 2297
24 Ga0209371_1011473 3300027312 Bacteria 2630
25 Ga0268256_1012452 3300030500 Bacteria 2630
26 Ga0307511_10069733 3300030521 Bacteria 2581
27 Ga0307512_10003845 3300030522 Bacteria 16903
28 Ga0307513_10113257 3300031456 Bacteria 2701
29 Ga0373962_0000686 3300035242 Bacteria 7655
30 Ga0316584_0041287 3300036712 Bacteria 3438
31 Ga0395898_0002281 3300037466 Bacteria 23136
32 Ga0439436_0004055 3300041404 Bacteria 4490
33 Ga0439433_0000977 3300041999 Bacteria 5761
34 Ga0466969_0008522 3300044656 Bacteria 5441
35 Ga0466972_0015538 3300044658 Bacteria 3805
36 Ga0466965_0002798 3300044683 Bacteria 7508
37 Ga0466966_0013180 3300044684 Bacteria 5474
38 Ga0466961_0002255 3300044693 Bacteria 11980
39 Ga0466963_0014851 3300044694 Bacteria 4810
40 Ga0466971_0009725 3300044719 Bacteria 4197
41 Ga0466968_0000802 3300044735 Bacteria 10947
42 Ga0466970_0001882 3300044765 Bacteria 10152
43 Ga0466957_0003068 3300044842 Bacteria 9085
44 Ga0466959_0002168 3300045049 Bacteria 12475
45 Ga0466958_0035017 3300045836 Bacteria 2998
46 Ga0466967_0001280 3300045976 Bacteria 14297
47 Ga0466967_0001960 3300045976 Bacteria 12458
48 Ga0466967_0003500 3300045976 Bacteria 10261
49 Ga0495592_0020103 3300046454 Bacteria 5077
50 Ga0495603_0001102 3300046455 Bacteria 15668
51 Ga0495629_0018770 3300046459 Bacteria 4943
52 Ga0495638_0064917 3300046460 Bacteria 2248
53 Ga0495651_0006493 3300046462 Bacteria 8938
54 Ga0495594_0000560 3300046499 Bacteria 19051
55 Ga0495618_0104170 3300046514 Bacteria 1816
56 Ga0495628_0062513 3300046516 Bacteria 2918
57 Ga0495640_0008377 3300046533 Bacteria 8110
58 Ga0495622_0010411 3300046557 Bacteria 4296
59 Ga0495611_0012201 3300046648 Bacteria 3653
60 Ga0495635_0034521 3300046663 Bacteria 3508
61 Ga0495588_0004082 3300046674 Bacteria 6426
62 Ga0495613_0019325 3300046689 Bacteria 5079
63 Ga0495589_0008626 3300046794 Bacteria 5315
64 Ga0495589_0010656 3300046794 Bacteria 4781
65 Ga0495604_0020228 3300047317 Bacteria 5319
66 Ga0495636_0011410 3300047318 Bacteria 3516
67 Ga0495680_0015291 3300047322 Bacteria 6623
68 Ga0495687_055027 3300047443 Bacteria 1666
69 Ga0495686_0032225 3300047472 Bacteria 3393
70 Ga0495602_0104727 3300048088 Bacteria 2314
71 Ga0496119_0000470 3300048922 Bacteria 54985
72 Ga0496120_0002961 3300048923 Bacteria 16169
73 Ga0501038_0017676 3300049574 Bacteria 6445
74 Ga0501038_0039347 3300049574 Bacteria 4136
75 Ga0501043_0052537 3300049579 Bacteria 3200
76 Ga0501047_0000068 3300049581 Bacteria 129241
77 Ga0501047_0008481 3300049581 Bacteria 9697
78 Ga0501047_0047313 3300049581 Bacteria 4156
79 Ga0501047_0135949 3300049581 Bacteria 2338
80 Ga0501080_0268792 3300049742 Bacteria 1552
81 Ga0501044_0009835 3300049823 Bacteria 10396
82 Ga0501044_0016398 3300049823 Bacteria 7954
83 Ga0501044_0053977 3300049823 Bacteria 4132
84 nmdc:mga06z11_3470_c1 3300050494 Bacteria 6104
85 Ga0466962_0005041 3300061719 Bacteria 6351
86 2862510029 2862507626 Bacteria 9425308
87 2585300512 2582581312 Bacteria 7308206
88 2585307292 2582581313 Bacteria 10042643
89 2644441107 2643221678 Bacteria 9540101
90 2644627232 2643221714 Bacteria 9015452
91 2784589182 2784132148 Bacteria 8627943
92 2785372459 2784746768 Bacteria 10036182
93 2793978471 2791355406 Bacteria 11364898
94 2808846625 2808606359 Bacteria 9866990
95 2809232791 2808606448 Bacteria 8656184
96 2812355076 2811994879 Bacteria 9313447
97 2812477969 2811994917 Bacteria 7761064
98 2852638605 2852635781 Bacteria 8251373
99 2862286306 2862281513 Bacteria 9621493
100 2862580560 2862574272 Bacteria 10567477
101 2867375084 2867369537 Bacteria 6501581
102 2877678204 2877676314 Bacteria 9512378
103 2919468899 2919468124 Bacteria 9133025
104 2946070825 2946064051 Bacteria 8957905
105 2946079760 2946072368 Bacteria 8999607
106 2947228413 2947224130 Bacteria 9938529
107 2954383326 2954380949 Bacteria 10050426
108 2966605037 2966598605 Bacteria 7676064
109 2990046560 2990044586 Bacteria 6603797
110 2990090507 2990088156 Bacteria 6657676
111 2997602103 2997600082 Bacteria 9896405
112 3006430826 3006425503 Bacteria 6491253
113 3006497243 3006493962 Bacteria 8825450
114 8023626110 8023623736 Bacteria 8593882
115 8025417887 8025413630 Bacteria 7014048
116 8047895524 8047893842 Bacteria 11723082
117 8048128449 8048127548 Bacteria 11053136
118 8048363430 8048356638 Bacteria 11044339
119 8048372549 8048369669 Bacteria 11666822
120 8048381483 8048379754 Bacteria 11877923
121 rootH1_10002893
122 rootH2_10223963
123 rootH1_10055193
124 JGI25160J50197_1000478
125 JGI25160J50197_1006216
126 JGI25160J50197_1012281
127 Ga0006562J51391_1132570
128 Ga0006562J51391_1132571
129 Ga0070668_100087199
130 Ga0070667_100121955
131 Ga0068856_100084798
132 Ga0068860_100087050
133 Ga0075367_10002689
134 Ga0182007_10008349
135 Ga0183367_1008
136 Ga0207426_1000249
137 Ga0207426_1000488
138 Ga0207426_1006445
139 Ga0207647_10013905
140 Ga0207668_10082210
141 Ga0207658_10062000
142 Ga0207703_10024656
143 Ga0207675_100140120
144 Ga0209371_1011473
145 Ga0268256_1012452
146 Ga0307511_10069733
147 Ga0307512_10003845
148 Ga0307513_10113257
149 Ga0373962_0000686
150 Ga0316584_0041287
151 Ga0395898_0002281
152 Ga0439436_0004055
153 Ga0439433_0000977
154 Ga0466969_0008522
155 Ga0466972_0015538
156 Ga0466965_0002798
157 Ga0466966_0013180
158 Ga0466961_0002255
159 Ga0466963_0014851
160 Ga0466971_0009725
161 Ga0466968_0000802
162 Ga0466970_0001882
163 Ga0466957_0003068
164 Ga0466959_0002168
165 Ga0466958_0035017
166 Ga0466967_0001280
167 Ga0466967_0001960
168 Ga0466967_0003500
169 Ga0495592_0020103
170 Ga0495603_0001102
171 Ga0495629_0018770
172 Ga0495638_0064917
173 Ga0495651_0006493
174 Ga0495594_0000560
175 Ga0495618_0104170
176 Ga0495628_0062513
177 Ga0495640_0008377
178 Ga0495622_0010411
179 Ga0495611_0012201
180 Ga0495635_0034521
181 Ga0495588_0004082
182 Ga0495613_0019325
183 Ga0495589_0008626
184 Ga0495589_0010656
185 Ga0495604_0020228
186 Ga0495636_0011410
187 Ga0495680_0015291
188 Ga0495687_055027
189 Ga0495686_0032225
190 Ga0495602_0104727
191 Ga0496119_0000470
192 Ga0496120_0002961
193 Ga0501038_0017676
194 Ga0501038_0039347
195 Ga0501043_0052537
196 Ga0501047_0000068
197 Ga0501047_0008481
198 Ga0501047_0047313
199 Ga0501047_0135949
200 Ga0501080_0268792
201 Ga0501044_0009835
202 Ga0501044_0016398
203 Ga0501044_0053977
204 nmdc:mga06z11_3470_c1
205 Ga0466962_0005041
206 2862510029
207 2585300512
208 2585307292
209 2644441107
210 2644627232
211 2784589182
212 2785372459
213 2793978471
214 2808846625
215 2809232791
216 2812355076
217 2812477969
218 2852638605
219 2862286306
220 2862580560
221 2867375084
222 2877678204
223 2919468899
224 2946070825
225 2946079760
226 2947228413
227 2954383326
228 2966605037
229 2990046560
230 2990090507
231 2997602103
232 3006430826
233 3006497243
234 8023626110
235 8025417887
236 8047895524
237 8048128449
238 8048363430
239 8048372549
240 8048381483

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ezm-assembly1.cif.gz_A crystal structure of arnt from cupriavidus metallidurans in the apo state 0.587 152 424
5gmy-assembly1.cif.gz_A crystal structure of the archaeoglobus fulgidus oligosaccharyltransferase (o29867_arcfu) tethered with an acceptor peptide containing the nvt sequon via a disulfide bond 0.5691 83 413
6ftg-assembly1.cif.gz_5 subtomogram average of ost-containing ribosome-translocon complexes from canine rough microsomal membranes 0.5583 75 412
8agb-assembly1.cif.gz_A structure of yeast oligosaccharylransferase complex with lipid-linked oligosaccharide bound 0.5481 79 412
8b6l-assembly1.cif.gz_I subtomogram average of the human sec61-trap-osta-translocon 0.5474 80 412
ID Description Score Start End Superfamily
af_O06152_111_270_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.729 155 300 1.20.1250.20
af_O06152_111_270_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6726 155 300 1.20.1250.20
af_O81320_4_142_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.2857 314 412 1.20.140.40
af_A0A1D6LGX2_21_454_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.261 55 388 1.25.10.10
af_A4HXR3_7_845_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.2316 76 386 1.25.10.10
ID Description Score Start End GO Terms
AF-A0A7K2FEA3-F1-model_v4 Integral membrane protein 0.9713 65 381 GO:0016020
AF-R4LBZ8-F1-model_v4 Integral membrane protein 0.9703 5 363 GO:0016020
AF-A0A6B3DKX1-F1-model_v4 deleted 0.966 2 371
AF-A0A7K2FEA3-F1-model_v4 Integral membrane protein 0.9623 65 381 GO:0016020
AF-A0A6B1N7K3-F1-model_v4 deleted 0.9593 11 439

Map