F106460

General Info

Members Datasets Scaffolds Average Seq Length
120 97 106 706

Family's Representative Sequence

Representative Sequence 3300028794|Ga0307515_10021613|Ga0307515_1002161310
Length 844
Sequence MTAPAIQLPERIDSFPTHVIDGYQVRAGRPMPFGPSLVSGGVNFSVFSSSAAAVSLVLFRHGEREPLAELPFPDEFRIGAVWAMTVFGLDHEAIDYGYRVTGPATPGPADRFDPSKILADPYAKAMTGRDVWGVEPDWTDPYPYRSRVALCDFDWEGDQPLRLPAEDLVIYELHVRGFTRDLSAGVSHPGTYAGLIEKIPYLKSLGVNCVELMPIFEFDEFENSRLNPQTGEQLLNYWGYSTVGFFAPKAGYAATGRFGMQVDEFKNLVKELHSAGIEVMLDVVFNHTAEGNENGPTINFRGLDNATYYMLTPEGYYYNFSGTGNTFNCNNPVVRDYVLSCLRYWASEFHIDGFRFDLAAILDRGQDGTPLQNPPLLESLSHDPVLRDCVLVAEAWDAGGLYQVGSFPNYQRWSEWNGKYRDTLRRFLKGDSGTIGELATRLVGSPDLYSDRGAASSINFITCHDGFTLADMVAYDGKHNDANGEDNRDGNNDNDSWNCGAEGTTDDVEVQALRQRQIKNAMLLLLTSQGIPMILAGDEVGRSQAGNNNAYCHDSPLTWFDWSLVESNTGLLRFVRDCIAFRMAHPVLRDRRHPIGADLLGTGYGDPSWHGAMAWSPDWGSESRLLGMLRAGAGADGAQDYVYVLTNAGWEPQEVELPVLPEGVHWHVFADTCAPEPRDVNHPGAEPVLNQGWLNVGPRSVVVLVGRTTVAELEAVWTADDAAPHDGGADTFQAEEATMSFSTNLAKGGRSAVITLTGELDALAAPALREEVERAATGPLEQLVLDMSDVSYLSSAGLRTLVFARQKMADDVRIVLVGANDAVARTIRLVGFQYSVEFSDRLPD

Samples

Sample ID Description Type Environment
1 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
2 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
3 2831426010 Nostoc sp. 106C Isolate Unclassified
4 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
5 2849660919 Nostoc sp. T09 Isolate Unclassified
6 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
7 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
8 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
9 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
10 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
11 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
12 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
13 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
49 3300031592 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA4 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
50 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
51 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
52 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
54 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
59 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
60 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
61 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
66 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
71 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
72 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
73 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
74 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
75 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
76 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
87 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
88 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
89 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
91 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
92 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
95 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
96 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
97 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 86.67
Metatranscriptomes 1.67
Isolates 11.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.83
Nodule 0
Rhizoplane 2.5
Rhizosphere 77.5
Stem 0
Stem Tuber 0
Unclassified 19.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000015 3300002155 Bacteria 29623
2 JGI24033J26618_1000052 3300002155 Bacteria 16979
3 rootH2_10008825 3300003320 Bacteria 45669
4 rootL2_10034954 3300003322 Bacteria 3774
5 rootH1_10000016 3300003323 Bacteria 58210
6 JGI25407J50210_10003407 3300003373 Bacteria 3799
7 Ga0070676_10022476 3300005328 Bacteria 3536
8 Ga0070661_100000483 3300005344 Bacteria 30431
9 Ga0070661_100000544 3300005344 Bacteria 28886
10 Ga0070714_100000166 3300005435 Bacteria 53159
11 Ga0070698_100076249 3300005471 Bacteria 3355
12 Ga0070672_100050582 3300005543 Bacteria 3237
13 Ga0068856_100005893 3300005614 Bacteria 12077
14 Ga0081455_10000706 3300005937 Bacteria 43303
15 Ga0081455_10003917 3300005937 Bacteria 16949
16 Ga0081538_10001561 3300005981 Bacteria 23482
17 Ga0081538_10003605 3300005981 Bacteria 14543
18 Ga0081538_10004659 3300005981 Bacteria 12577
19 Ga0075430_100026550 3300006846 Bacteria 4925
20 Ga0075431_100002304 3300006847 Bacteria 18330
21 Ga0075431_100006471 3300006847 Bacteria 11634
22 Ga0075431_100100382 3300006847 Bacteria 2986
23 Ga0075429_100069040 3300006880 Bacteria 3076
24 Ga0114129_10002009 3300009147 Bacteria 27863
25 Ga0114129_10009541 3300009147 Bacteria 13844
26 Ga0114129_10054602 3300009147 Bacteria 5601
27 Ga0105241_10019094 3300009174 Bacteria 5056
28 Ga0157369_10000571 3300013105 Bacteria 48582
29 Ga0157374_10013224 3300013296 Bacteria 7199
30 Ga0157375_10068426 3300013308 Bacteria 3553
31 Ga0157379_10016867 3300014968 Bacteria 6428
32 Ga0157376_10059725 3300014969 Bacteria 3198
33 Ga0213875_10002235 3300021388 Bacteria 11758
34 Ga0207697_10009981 3300025315 Bacteria 4078
35 Ga0207645_10011242 3300025907 Bacteria 6122
36 Ga0207649_10000210 3300025920 Bacteria 48571
37 Ga0207649_10000227 3300025920 Bacteria 45931
38 Ga0207659_10027596 3300025926 Bacteria 3847
39 Ga0207700_10023005 3300025928 Bacteria 4287
40 Ga0207664_10000391 3300025929 Bacteria 31550
41 Ga0207706_10011025 3300025933 Bacteria 8240
42 Ga0207691_10053433 3300025940 Bacteria 3688
43 Ga0207702_10002874 3300026078 Bacteria 16108
44 Ga0207702_10016890 3300026078 Bacteria 6040
45 Ga0207676_10005741 3300026095 Bacteria 8777
46 Ga0207683_10074993 3300026121 Bacteria 2994
47 Ga0307515_10021613 3300028794 Bacteria 11395
48 Ga0310117_100004 3300031592 Bacteria 8480
49 Ga0307409_100001451 3300031995 Bacteria 11655
50 Ga0316583_10005485 3300032133 Bacteria 4549
51 Ga0316588_1000537 3300033528 Bacteria 5274
52 Ga0316574_0000466 3300035398 Bacteria 16350
53 Ga0316584_0057845 3300036712 Bacteria 2903
54 Ga0395899_0000022 3300037312 Bacteria 378509
55 Ga0395898_0000012 3300037466 Bacteria 480882
56 Ga0436364_0584502 3300037853 Bacteria 4171
57 Ga0436364_0966519 3300037853 Bacteria 9733
58 Ga0436364_1401376 3300037853 Bacteria 69007
59 Ga0400484_40003 3300038725 Bacteria 5262
60 Ga0400486_27965 3300038742 Bacteria 3840
61 Ga0400489_58113 3300039093 Bacteria 26827
62 Ga0436365_1125831 3300039437 Bacteria 4809
63 Ga0451577_0000121 3300042876 Bacteria 172135
64 Ga0466969_0005273 3300044656 Bacteria 6885
65 Ga0466969_0012313 3300044656 Bacteria 4512
66 Ga0466965_0015087 3300044683 Bacteria 3666
67 Ga0466966_0000281 3300044684 Bacteria 33346
68 Ga0453684_0000001 3300044712 Bacteria 2623166
69 Ga0453684_0000227 3300044712 Bacteria 244655
70 Ga0453684_0000361 3300044712 Bacteria 188097
71 Ga0453684_0000511 3300044712 Bacteria 150804
72 Ga0466957_0006755 3300044842 Bacteria 6481
73 Ga0466959_0001173 3300045049 Bacteria 15781
74 Ga0451576_0006851 3300045051 Bacteria 13819
75 Ga0495580_0006768 3300046472 Bacteria 9294
76 Ga0495665_0014061 3300046531 Bacteria 4321
77 Ga0496101_0057776 3300048904 Bacteria 2807
78 Ga0496102_0001050 3300048905 Bacteria 25557
79 Ga0496115_0018027 3300048918 Bacteria 5410
80 Ga0496125_0000017 3300048928 Bacteria 508217
81 Ga0501031_0000426 3300049568 Bacteria 24258
82 Ga0501032_0000268 3300049569 Bacteria 43730
83 Ga0501033_0000003 3300049570 Bacteria 586973
84 Ga0501033_0000008 3300049570 Bacteria 274368
85 Ga0501034_0003107 3300049571 Bacteria 19142
86 Ga0501034_0012689 3300049571 Bacteria 8694
87 Ga0501036_0054714 3300049572 Bacteria 3381
88 Ga0501037_0000002 3300049573 Bacteria 292291
89 Ga0501038_0000301 3300049574 Bacteria 42026
90 Ga0501039_0002868 3300049575 Bacteria 12896
91 Ga0501043_0000716 3300049579 Bacteria 29389
92 Ga0501047_0011028 3300049581 Bacteria 8549
93 Ga0501047_0043580 3300049581 Bacteria 4335
94 Ga0501070_0002556 3300049586 Bacteria 15928
95 Ga0501071_0066349 3300049587 Bacteria 2623
96 Ga0501083_0001814 3300049744 Bacteria 14628
97 Ga0501083_0006364 3300049744 Bacteria 8370
98 Ga0501035_0000007 3300049822 Bacteria 359281
99 Ga0501044_0002200 3300049823 Bacteria 22359
100 Ga0501044_0082308 3300049823 Bacteria 3257
101 nmdc:mga05p37_182045_c1 3300050507 Bacteria 2556
102 nmdc:mga09592_64079_c1 3300050508 Bacteria 3111
103 nmdc:mga06r32_15016_c1 3300050510 Bacteria 7029
104 Ga0500645_008633 3300053730 Bacteria 3463
105 Ga0466962_0000010 3300061719 Bacteria 130694
106 Ga0466962_0013941 3300061719 Bacteria 3872

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300021388 Ga0213875_10002235 Ga0213875_100022352 665
2 3300037853 Ga0436364_1401376 Ga0436364_1401376_59950_62073 665
3 iso_pu_bacteria 2912723979 2912724430 665
4 3300005981 Ga0081538_10004659 Ga0081538_100046594 672
5 3300045051 Ga0451576_0006851 Ga0451576_0006851_6944_9112 672
6 3300003373 JGI25407J50210_10003407 JGI25407J50210_100034073 675
7 3300005981 Ga0081538_10003605 Ga0081538_1000360512 675
8 3300037853 Ga0436364_0584502 Ga0436364_0584502_1253_3397 675
9 3300005328 Ga0070676_10022476 Ga0070676_100224762 677
10 3300005543 Ga0070672_100050582 Ga0070672_1000505822 677
11 3300014969 Ga0157376_10059725 Ga0157376_100597252 677
12 3300025315 Ga0207697_10009981 Ga0207697_100099814 677
13 3300025907 Ga0207645_10011242 Ga0207645_100112426 677
14 3300025926 Ga0207659_10027596 Ga0207659_100275963 677
15 3300025933 Ga0207706_10011025 Ga0207706_100110256 677
16 3300025940 Ga0207691_10053433 Ga0207691_100534331 677
17 3300026095 Ga0207676_10005741 Ga0207676_100057419 677
18 3300026121 Ga0207683_10074993 Ga0207683_100749932 677
19 3300049587 Ga0501071_0066349 Ga0501071_0066349_415_2520 677
20 iso_pu_bacteria 2873314349 2873316264 678
21 3300005937 Ga0081455_10003917 Ga0081455_1000391712 679
22 3300006847 Ga0075431_100100382 Ga0075431_1001003823 679
23 3300048918 Ga0496115_0018027 Ga0496115_0018027_3047_5191 680
24 3300036712 Ga0316584_0057845 Ga0316584_0057845_626_2740 681
25 3300042876 Ga0451577_0000121 Ga0451577_0000121_81564_83741 681
26 3300044712 Ga0453684_0000227 Ga0453684_0000227_122549_124726 681
27 3300049571 Ga0501034_0012689 Ga0501034_0012689_653_2779 681
28 3300049581 Ga0501047_0011028 Ga0501047_0011028_762_2888 681
29 3300049823 Ga0501044_0082308 Ga0501044_0082308_128_2254 681
30 iso_pu_bacteria 3006493962 3006496090 681
31 3300031592 Ga0310117_100004 Ga0310117_1000044 682
32 3300038742 Ga0400486_27965 Ga0400486_27965_21_2135 682
33 3300044712 Ga0453684_0000361 Ga0453684_0000361_5778_7943 682
34 3300044712 Ga0453684_0000511 Ga0453684_0000511_127828_130011 682
35 3300049581 Ga0501047_0043580 Ga0501047_0043580_870_2996 682
36 3300035398 Ga0316574_0000466 Ga0316574_0000466_4065_6239 683
37 3300037853 Ga0436364_0966519 Ga0436364_0966519_2523_4634 683
38 3300039437 Ga0436365_1125831 Ga0436365_1125831_600_2711 683
39 3300048928 Ga0496125_0000017 Ga0496125_0000017_154822_156873 683
40 3300044712 Ga0453684_0000001 Ga0453684_0000001_514104_516224 684
41 3300044656 Ga0466969_0012313 Ga0466969_0012313_2154_4286 685
42 3300044684 Ga0466966_0000281 Ga0466966_0000281_26563_28695 685
43 3300045049 Ga0466959_0001173 Ga0466959_0001173_9842_11974 685
44 3300061719 Ga0466962_0013941 Ga0466962_0013941_69_2201 685
45 3300006846 Ga0075430_100026550 Ga0075430_1000265504 686
46 3300006847 Ga0075431_100006471 Ga0075431_1000064716 686
47 3300009147 Ga0114129_10002009 Ga0114129_1000200924 686
48 3300031995 Ga0307409_100001451 Ga0307409_1000014516 686
49 3300050510 nmdc:mga06r32_15016_c1 nmdc:mga06r32_15016_c1_649_2751 686
50 3300009174 Ga0105241_10019094 Ga0105241_100190946 687
51 3300005937 Ga0081455_10000706 Ga0081455_1000070618 688
52 3300006847 Ga0075431_100002304 Ga0075431_1000023044 688
53 3300006880 Ga0075429_100069040 Ga0075429_1000690402 688
54 3300009147 Ga0114129_10009541 Ga0114129_1000954114 688
55 3300009147 Ga0114129_10054602 Ga0114129_100546023 688
56 3300050507 nmdc:mga05p37_182045_c1 nmdc:mga05p37_182045_c1_231_2366 688
57 3300050508 nmdc:mga09592_64079_c1 nmdc:mga09592_64079_c1_462_2597 688
58 3300044656 Ga0466969_0005273 Ga0466969_0005273_3662_5830 689
59 iso_pu_bacteria 2891395885 2891400066 690
60 3300025928 Ga0207700_10023005 Ga0207700_100230054 691
61 3300049744 Ga0501083_0001814 Ga0501083_0001814_10792_12912 692
62 3300032133 Ga0316583_10005485 Ga0316583_100054853 693
63 3300049744 Ga0501083_0006364 Ga0501083_0006364_578_2698 693
64 iso_pu_bacteria 8055066027 8055068751 693
65 iso_pu_bacteria 3002998708 3003008093 696
66 3300005435 Ga0070714_100000166 Ga0070714_10000016626 697
67 3300025929 Ga0207664_10000391 Ga0207664_100003916 697
68 3300005981 Ga0081538_10001561 Ga0081538_1000156118 699
69 iso_pu_bacteria 8055172936 8055175624 699
70 iso_pu_bacteria 2786546548 2787506041 700
71 iso_pu_bacteria 2935390628 2935393632 700
72 iso_pu_bacteria 3006486233 3006491877 700
73 3300005471 Ga0070698_100076249 Ga0070698_1000762493 701
74 3300013105 Ga0157369_10000571 Ga0157369_1000057114 702
75 3300028794 Ga0307515_10021613 Ga0307515_1002161310 702
76 iso_pu_bacteria 2786546940 2788437154 702
77 3300003320 rootH2_10008825 rootH2_1000882522 703
78 3300003322 rootL2_10034954 rootL2_100349542 703
79 3300014968 Ga0157379_10016867 Ga0157379_100168679 703
80 3300033528 Ga0316588_1000537 Ga0316588_10005375 703
81 3300044683 Ga0466965_0015087 Ga0466965_0015087_649_2763 703
82 3300046472 Ga0495580_0006768 Ga0495580_0006768_6545_8686 703
83 3300046531 Ga0495665_0014061 Ga0495665_0014061_1996_4137 703
84 3300048904 Ga0496101_0057776 Ga0496101_0057776_182_2299 703
85 3300048905 Ga0496102_0001050 Ga0496102_0001050_17919_20036 703
86 3300049574 Ga0501038_0000301 Ga0501038_0000301_38230_40395 703
87 3300061719 Ga0466962_0000010 Ga0466962_0000010_48817_50931 703
88 3300005614 Ga0068856_100005893 Ga0068856_10000589310 704
89 3300026078 Ga0207702_10002874 Ga0207702_100028742 704
90 3300037312 Ga0395899_0000022 Ga0395899_0000022_136311_138428 704
91 3300037466 Ga0395898_0000012 Ga0395898_0000012_435906_438023 704
92 3300038725 Ga0400484_40003 Ga0400484_40003_2709_4823 704
93 3300003323 rootH1_10000016 rootH1_1000001615 705
94 3300026078 Ga0207702_10016890 Ga0207702_100168903 705
95 3300044842 Ga0466957_0006755 Ga0466957_0006755_2335_4455 705
96 3300049568 Ga0501031_0000426 Ga0501031_0000426_9904_12030 705
97 3300049570 Ga0501033_0000008 Ga0501033_0000008_9071_11197 705
98 3300049572 Ga0501036_0054714 Ga0501036_0054714_881_3007 705
99 3300049573 Ga0501037_0000002 Ga0501037_0000002_61247_63373 705
100 3300049575 Ga0501039_0002868 Ga0501039_0002868_5126_7252 705
101 3300049579 Ga0501043_0000716 Ga0501043_0000716_4133_6259 705
102 3300049586 Ga0501070_0002556 Ga0501070_0002556_3350_5476 705
103 3300049822 Ga0501035_0000007 Ga0501035_0000007_314029_316155 705
104 3300049823 Ga0501044_0002200 Ga0501044_0002200_7397_9523 705
105 3300053730 Ga0500645_008633 Ga0500645_008633_65_2185 705
106 iso_pu_bacteria 2831426010 2831426111 706
107 iso_pu_bacteria 2848694841 2848698945 706
108 iso_pu_bacteria 2849660919 2849661967 706
109 3300039093 Ga0400489_58113 Ga0400489_58113_9448_11637 707
110 3300049571 Ga0501034_0003107 Ga0501034_0003107_8450_10594 707
111 3300002155 JGI24033J26618_1000052 JGI24033J26618_10000529 708
112 3300005344 Ga0070661_100000544 Ga0070661_1000005445 708
113 3300013296 Ga0157374_10013224 Ga0157374_100132245 708
114 3300013308 Ga0157375_10068426 Ga0157375_100684262 708
115 3300025920 Ga0207649_10000227 Ga0207649_100002275 708
116 3300049569 Ga0501032_0000268 Ga0501032_0000268_5349_7517 708
117 3300049570 Ga0501033_0000003 Ga0501033_0000003_474835_477003 708
118 3300002155 JGI24033J26618_1000015 JGI24033J26618_100001517 709
119 3300005344 Ga0070661_100000483 Ga0070661_10000048316 709
120 3300025920 Ga0207649_10000210 Ga0207649_1000021015 709

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13466

STAS_2

STAS domain

754

833

0.96

PF01740

STAS

STAS domain

743

844

0.93

PF02922

CBM_48

Carbohydrate-binding module 48 (Isoamylase N-terminal domain)

32

123

0.89

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

190

301

0.87

PF21156

ISOA1-3_C

Isoamylase 1-3, C-terminal

608

691

0.85

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

291

548

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j7r-assembly1.cif.gz_B crystal structure of chlamydomonas reinhardtii isoamylase 1 (isa1) 0.9128 11 709
4okd-assembly1.cif.gz_B crystal structure of chlamydomonas reinhardtii isoamylase 1 (isa1) in complex with maltoheptaose 0.907 17 709
7u3a-assembly1.cif.gz_A structure of the streptomyces venezuelae glgx-c-di-gmp complex 0.9057 18 707
7u3b-assembly1.cif.gz_C structure of s. venezuelae glgx bound to c-di-gmp and acarbose (ph 8.5) 0.9053 18 707
7u3b-assembly1.cif.gz_H structure of s. venezuelae glgx bound to c-di-gmp and acarbose (ph 8.5) 0.9018 18 709
ID Description Score Start End Superfamily
af_A0A1D6PXQ9_198_442_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9523 144 359 3.20.20.80
af_D0TZF0_227_692_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9413 144 589 3.20.20.80
2vuyA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9258 147 588 3.20.20.80
2wskA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9178 146 591 3.20.20.80
2vuyA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9177 147 588 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A656TR94-F1-model_v4 deleted 0.9875 4 347
AF-A0A6D0J2D2-F1-model_v4 deleted 0.9856 228 357
AF-A0A6P0XL81-F1-model_v4 Glycogen debranching protein GlgX 0.9812 19 707 GO:0004133
GO:0005980
GO:0019156
AF-A0A429TEE7-F1-model_v4 deleted 0.98 3 407
AF-A0A6P0XL81-F1-model_v4 Glycogen debranching protein GlgX 0.9798 19 707 GO:0004133
GO:0005980
GO:0019156

Feature Viewer

pLDDT pTM Quality
90.67 0.92 High
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Predicted Structure (AlphaFold2)

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