F102342

General Info

Members Datasets Scaffolds Average Seq Length
119 96 238 496

Family's Representative Sequence

Representative Sequence 3300031911|Ga0307412_10026193|Ga0307412_100261933
Length 540
Sequence MSGPQTLPAAVRAASDAYADRAAVVDGPVTLTFAELHEQVRTVARAYAALGVAPGDRVCIWAPNSWEWEVAALAVSYAGGTLVPLNTRYKGHEVVDVLARTRATLVVVADGFLGRSQTDELVDAAAEAGADELGSEADVVQGLPSVRAVVRLGDGDRSGTTSWSELSGLAESVPAADIEARADDISPDDIADIMFTSGTTGRSKGVMSAHRQTVAAAAVWAATGEVTQADRYLLVNPYFHSFGYKAGIVVSVLTGCTAYPQATFDVAEALRLIEQERISVLPGAPAIFHSLFQAPELAGTDLSSLRLAVTGAASVPVTLVERMQTELSFDTVLTAFGMTECVVATMCRPGDPDELVASTCGPAVEGLELAITDPETGETKPPGEEGELRLRGPMVMLGYLDDPEATAEAIDGDGWLHTGDIGVIDEAGYLRITDRLKDMYISGGFNVYPAEVEQTLARLEGVVESAVVGVPDERLGEVGKAFVVTDPGGADRTLTHEDVIAFAKERLANFKVPRDVEFVRFLPRNLAGKVLKNELREADQ

Samples

Sample ID Description Type Environment
1 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
2 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
5 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
6 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
7 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
8 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
11 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
12 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
13 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
14 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
22 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
37 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
38 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
39 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
40 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
41 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
42 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
43 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
44 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
45 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
46 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
47 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
48 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
49 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
50 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
51 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
52 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
53 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
54 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
57 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
58 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
59 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
61 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
62 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
63 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
64 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
65 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
66 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
67 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
68 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
69 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
70 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
71 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
72 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
73 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
74 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
75 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
76 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
77 2554235231 Pseudomonas putida MTCC 5279 Isolate Unclassified
78 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
79 2643221576 Nocardioides sp. Root614 Isolate Unclassified
80 2643221590 Nocardioides sp. Root682 Isolate Unclassified
81 2643221604 Nocardioides sp. Root190 Isolate Unclassified
82 2643221615 Nocardioides sp. Root224 Isolate Unclassified
83 2643221617 Nocardioides sp. Root79 Isolate Unclassified
84 2643221620 Nocardioides sp. Root240 Isolate Unclassified
85 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
86 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
87 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
88 2738541305 Nocardioides sp. CF167 Isolate Unclassified
89 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
90 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
91 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
92 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
93 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
94 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
95 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
96 2922554459 Rhodococcus sp. 66b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.19
Metatranscriptomes 0
Isolates 16.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.17
Nodule 0
Rhizoplane 0
Rhizosphere 63.03
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307412_10026193 3300031911 Bacteria 3622
2 Ga0070660_100020170 3300005339 Bacteria 4895
3 Ga0070714_100000644 3300005435 Bacteria 24750
4 Ga0070662_100072758 3300005457 Bacteria 2539
5 Ga0068855_100024311 3300005563 Bacteria 7252
6 Ga0070664_100100440 3300005564 Bacteria 2515
7 Ga0068852_100124361 3300005616 Bacteria 2366
8 Ga0068860_100000410 3300005843 Bacteria 55852
9 Ga0081455_10001381 3300005937 Bacteria 30015
10 Ga0075365_10023504 3300006038 Bacteria 3878
11 Ga0075365_10027088 3300006038 Bacteria 3643
12 Ga0075363_100000514 3300006048 Bacteria 12426
13 Ga0075363_100003886 3300006048 Bacteria 6447
14 Ga0075363_100012165 3300006048 Bacteria 4140
15 Ga0075364_10059351 3300006051 Bacteria 2507
16 Ga0075369_10003678 3300006186 Bacteria 5603
17 Ga0075370_10006594 3300006353 Bacteria 5849
18 Ga0075370_10021689 3300006353 Bacteria 3520
19 Ga0075428_100012018 3300006844 Bacteria 9632
20 Ga0075430_100005908 3300006846 Bacteria 10336
21 Ga0075429_100025329 3300006880 Bacteria 5149
22 Ga0105245_10017313 3300009098 Bacteria 6288
23 Ga0114129_10038376 3300009147 Bacteria 6757
24 Ga0105239_10070568 3300010375 Bacteria 3838
25 Ga0157380_10058671 3300014326 Bacteria 3069
26 Ga0209050_1001468 3300025298 Bacteria 25215
27 Ga0207647_10007775 3300025904 Bacteria 7716
28 Ga0207647_10021513 3300025904 Bacteria 4304
29 Ga0207657_10028487 3300025919 Bacteria 5094
30 Ga0207687_10009115 3300025927 Bacteria 6488
31 Ga0207664_10000547 3300025929 Bacteria 26587
32 Ga0207690_10031560 3300025932 Bacteria 3392
33 Ga0207706_10119183 3300025933 Bacteria 2320
34 Ga0207679_10038378 3300025945 Bacteria 3412
35 Ga0207667_10076376 3300025949 Bacteria 3476
36 Ga0207667_10210590 3300025949 Bacteria 1992
37 Ga0207702_10022621 3300026078 Bacteria 5213
38 Ga0207675_100202261 3300026118 Bacteria 1908
39 Ga0207698_10127126 3300026142 Bacteria 2170
40 Ga0268266_10300321 3300028379 Bacteria 1498
41 Ga0268264_10000155 3300028381 Bacteria 156029
42 Ga0316181_1115848 3300030744 Bacteria 1708
43 Ga0307405_10000504 3300031731 Bacteria 14716
44 Ga0307415_100061626 3300032126 Bacteria 2598
45 Ga0436364_1154837 3300037853 Bacteria 10969
46 Ga0395901_0103941 3300038443 Bacteria 2981
47 Ga0439465_0013185 3300041413 Bacteria 2580
48 Ga0439432_028834 3300042006 Bacteria 1806
49 Ga0439452_002276 3300042010 Bacteria 7168
50 Ga0439456_000016 3300042013 Bacteria 65025
51 Ga0466969_0034379 3300044656 Bacteria 2568
52 Ga0466972_0078964 3300044658 Bacteria 1567
53 Ga0466965_0005745 3300044683 Bacteria 5600
54 Ga0466965_0026595 3300044683 Bacteria 2805
55 Ga0466966_0013780 3300044684 Bacteria 5349
56 Ga0466961_0016964 3300044693 Bacteria 4678
57 Ga0466961_0024797 3300044693 Bacteria 3858
58 Ga0466963_0006045 3300044694 Bacteria 7132
59 Ga0466963_0022036 3300044694 Bacteria 4029
60 Ga0466970_0001885 3300044765 Bacteria 10139
61 Ga0466970_0018162 3300044765 Bacteria 3639
62 Ga0466957_0004509 3300044842 Bacteria 7772
63 Ga0466957_0007356 3300044842 Bacteria 6226
64 Ga0466959_0035345 3300045049 Bacteria 3697
65 Ga0466959_0088493 3300045049 Bacteria 2226
66 Ga0466958_0005171 3300045836 Bacteria 6981
67 Ga0466958_0012799 3300045836 Bacteria 4760
68 Ga0466958_0027219 3300045836 Bacteria 3384
69 Ga0466967_0005273 3300045976 Bacteria 8916
70 Ga0466967_0022351 3300045976 Bacteria 5158
71 Ga0466967_0063472 3300045976 Bacteria 3282
72 Ga0466967_0136682 3300045976 Bacteria 2280
73 Ga0495683_0012047 3300047323 Bacteria 4545
74 Ga0496124_0087247 3300048927 Bacteria 2552
75 Ga0496125_0075359 3300048928 Bacteria 2611
76 Ga0501036_0085256 3300049572 Bacteria 2670
77 Ga0501068_0009232 3300049584 Bacteria 5512
78 Ga0501071_0202300 3300049587 Bacteria 1492
79 Ga0501079_0087094 3300049741 Bacteria 2418
80 Ga0501079_0106781 3300049741 Bacteria 2173
81 Ga0501079_0176076 3300049741 Bacteria 1668
82 nmdc:mga03n38_14656_c1 3300050490 Bacteria 3010
83 nmdc:mga03n38_3118_c1 3300050490 Bacteria 5271
84 nmdc:mga00v17_94652_c1 3300050491 Bacteria 1880
85 nmdc:mga0yw44_139487_c1 3300050492 Bacteria 1575
86 nmdc:mga0yw44_664_c1 3300050492 Bacteria 12540
87 nmdc:mga0yw44_88671_c1 3300050492 Bacteria 1951
88 nmdc:mga04h51_867_c1 3300050495 Bacteria 6973
89 nmdc:mga07m45_25053_c1 3300050496 Bacteria 3270
90 nmdc:mga07m45_7627_c1 3300050496 Bacteria 5535
91 nmdc:mga05p37_15295_c1 3300050507 Bacteria 9217
92 nmdc:mga09592_9509_c1 3300050508 Bacteria 7901
93 Ga0500644_0000067 3300053088 Bacteria 61703
94 Ga0500641_0007977 3300053096 Bacteria 3774
95 Ga0500556_0002557 3300053104 Bacteria 5751
96 Ga0500593_002084 3300053117 Bacteria 7257
97 Ga0500573_0002076 3300053140 Bacteria 9854
98 Ga0466962_0028002 3300061719 Bacteria 2701
99 Ga0530510_0012397 3300061734 Bacteria 5989
100 2555249010 2554235231 Bacteria 5215788
101 2566996023 2565956761 Bacteria 6601618
102 2643891713 2643221576 Bacteria 5214352
103 2643960761 2643221590 Bacteria 5214697
104 2644035722 2643221604 Bacteria 5014917
105 2644089250 2643221615 Bacteria 5487866
106 2644101563 2643221617 Bacteria 5139111
107 2644115626 2643221620 Bacteria 5134593
108 2644319095 2643221657 Bacteria 5490246
109 2645721754 2643221961 Bacteria 3919167
110 2645724293 2643221962 Bacteria 3874254
111 2738868179 2738541305 Bacteria 4910150
112 2738893286 2738541308 Bacteria 7020677
113 2739362938 2738543034 Bacteria 6084756
114 2855387034 2855386786 Bacteria 4752232
115 2866618460 2866612099 Bacteria 7543886
116 2882806941 2882806704 Bacteria 3007728
117 2904540658 2904535858 Bacteria 6308016
118 2919717995 2919713450 Bacteria 7431245
119 2922554749 2922554459 Bacteria 6683962
120 Ga0307412_10026193
121 Ga0070660_100020170
122 Ga0070714_100000644
123 Ga0070662_100072758
124 Ga0068855_100024311
125 Ga0070664_100100440
126 Ga0068852_100124361
127 Ga0068860_100000410
128 Ga0081455_10001381
129 Ga0075365_10023504
130 Ga0075365_10027088
131 Ga0075363_100000514
132 Ga0075363_100003886
133 Ga0075363_100012165
134 Ga0075364_10059351
135 Ga0075369_10003678
136 Ga0075370_10006594
137 Ga0075370_10021689
138 Ga0075428_100012018
139 Ga0075430_100005908
140 Ga0075429_100025329
141 Ga0105245_10017313
142 Ga0114129_10038376
143 Ga0105239_10070568
144 Ga0157380_10058671
145 Ga0209050_1001468
146 Ga0207647_10007775
147 Ga0207647_10021513
148 Ga0207657_10028487
149 Ga0207687_10009115
150 Ga0207664_10000547
151 Ga0207690_10031560
152 Ga0207706_10119183
153 Ga0207679_10038378
154 Ga0207667_10076376
155 Ga0207667_10210590
156 Ga0207702_10022621
157 Ga0207675_100202261
158 Ga0207698_10127126
159 Ga0268266_10300321
160 Ga0268264_10000155
161 Ga0316181_1115848
162 Ga0307405_10000504
163 Ga0307415_100061626
164 Ga0436364_1154837
165 Ga0395901_0103941
166 Ga0439465_0013185
167 Ga0439432_028834
168 Ga0439452_002276
169 Ga0439456_000016
170 Ga0466969_0034379
171 Ga0466972_0078964
172 Ga0466965_0005745
173 Ga0466965_0026595
174 Ga0466966_0013780
175 Ga0466961_0016964
176 Ga0466961_0024797
177 Ga0466963_0006045
178 Ga0466963_0022036
179 Ga0466970_0001885
180 Ga0466970_0018162
181 Ga0466957_0004509
182 Ga0466957_0007356
183 Ga0466959_0035345
184 Ga0466959_0088493
185 Ga0466958_0005171
186 Ga0466958_0012799
187 Ga0466958_0027219
188 Ga0466967_0005273
189 Ga0466967_0022351
190 Ga0466967_0063472
191 Ga0466967_0136682
192 Ga0495683_0012047
193 Ga0496124_0087247
194 Ga0496125_0075359
195 Ga0501036_0085256
196 Ga0501068_0009232
197 Ga0501071_0202300
198 Ga0501079_0087094
199 Ga0501079_0106781
200 Ga0501079_0176076
201 nmdc:mga03n38_14656_c1
202 nmdc:mga03n38_3118_c1
203 nmdc:mga00v17_94652_c1
204 nmdc:mga0yw44_139487_c1
205 nmdc:mga0yw44_664_c1
206 nmdc:mga0yw44_88671_c1
207 nmdc:mga04h51_867_c1
208 nmdc:mga07m45_25053_c1
209 nmdc:mga07m45_7627_c1
210 nmdc:mga05p37_15295_c1
211 nmdc:mga09592_9509_c1
212 Ga0500644_0000067
213 Ga0500641_0007977
214 Ga0500556_0002557
215 Ga0500593_002084
216 Ga0500573_0002076
217 Ga0466962_0028002
218 Ga0530510_0012397
219 2555249010
220 2566996023
221 2643891713
222 2643960761
223 2644035722
224 2644089250
225 2644101563
226 2644115626
227 2644319095
228 2645721754
229 2645724293
230 2738868179
231 2738893286
232 2739362938
233 2855387034
234 2866618460
235 2882806941
236 2904540658
237 2919717995
238 2922554749

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

451

529

0.94

PF00501

AMP-binding

AMP-binding enzyme

11

400

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x8f-assembly1.cif.gz_A ternary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with amp and its product analogue osb-ncoa at 1.76 angstrom 0.9097 4 505
5x8g-assembly2.cif.gz_D binary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with its product analogue osb-ncoa at 1.90 angstrom 0.9071 4 505
4u5y-assembly1.cif.gz_D crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.9048 419 504
5wm6-assembly1.cif.gz_A crystal structure of cahj in complex with benzoyl adenylate 0.9031 7 504
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.9017 5 406
ID Description Score Start End Superfamily
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9874 408 504 3.30.300.30
af_Q9SS00_444_572_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9764 408 504 3.30.300.30
af_K7VHQ0_441_545_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9751 408 504 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9736 409 502 3.30.300.30
af_Q9VXZ8_496_596_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9702 409 504 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A7K0MYV2-F1-model_v4 Fatty acid--CoA ligase family protein 0.9798 408 504 GO:0006631
GO:0031956
AF-A0A2K3LEK0-F1-model_v4 4-coumarate-CoA ligase 7-like protein 0.9692 417 502 GO:0016405
AF-A0A2E4XRB8-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9657 409 504 GO:0006631
GO:0031956
AF-J1ZYK7-F1-model_v4 4-coumarate:CoA ligase 0.9596 419 504 GO:0016405
AF-A0A3D5MRC7-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9567 405 504 GO:0016405

Map