F101326

General Info

Members Datasets Scaffolds Average Seq Length
119 78 238 420

Family's Representative Sequence

Representative Sequence 3300006880|Ga0075429_100159236|Ga0075429_1001592362
Length 489
Sequence VHLVRLFHVSGVWGQSRKRALPAQSSARAPYLTRQLPPLDSPHAFDVSVFAVRIIVQRGPPPVVALMRKPSLLVIFLTVFIDLVGFGIVLPLLPVYSRNFGASDLVVGFIMASFSLMQFLFAPAWGRLSDRIGRRPVLLVSTFGAALSYAVFAYGSTLGGTAALTILLASRIVAGICGANITVAQAYIADITPPSERSKKMGLIGMAFGLGFICGPLLGGYASTRLGLWGPGCVAAVICAANFLLALAVLPESRRADSSPVAPRPRLSQWTHVLRRPTIGLLVTIFFLATFCFTCFEMTLGLLVIDNFHLDLVRDAGTVAVLFAFCGIVSAFVQGGPIGKLVKKMGEPRLIAVSLLLVAISMIPMPFIHGNGPLSWGVLGTKAGWPWWQLLFVLAILAIGSGLTRPPLFGMLSILTPEHEQGETIGVAQSAGSLARIAGPIFAGALFHLHPTWPYVVCGIIALITAIIAWQRLCRSESVLLAAKAQGSF

Samples

Sample ID Description Type Environment
1 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
39 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
40 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
41 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
42 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
45 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
46 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
47 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
48 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
49 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
59 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
60 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
65 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
66 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
67 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
68 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
69 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
70 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
71 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
72 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
77 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
78 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 13.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075429_100159236 3300006880 Bacteria 1977
2 Ga0070658_10063449 3300005327 Bacteria 3012
3 Ga0070683_100206553 3300005329 Bacteria 1866
4 Ga0070690_100052295 3300005330 Bacteria 2611
5 Ga0070666_10061773 3300005335 Bacteria 2537
6 Ga0070689_100005428 3300005340 Bacteria 8701
7 Ga0070689_100009426 3300005340 Bacteria 6920
8 Ga0070689_100060406 3300005340 Bacteria 2947
9 Ga0070689_100076307 3300005340 Bacteria 2625
10 Ga0070714_100018261 3300005435 Bacteria 5694
11 Ga0070678_100214785 3300005456 Unclassified 1596
12 Ga0070681_10014244 3300005458 Bacteria 7914
13 Ga0068867_100211930 3300005459 Bacteria 1556
14 Ga0070685_10089419 3300005466 Bacteria 1861
15 Ga0070686_100005871 3300005544 Bacteria 6804
16 Ga0070704_100014754 3300005549 Bacteria 4887
17 Ga0068855_100062449 3300005563 Unclassified 4349
18 Ga0068857_100073616 3300005577 Bacteria 3044
19 Ga0068856_100000317 3300005614 Bacteria 52949
20 Ga0068856_100029872 3300005614 Bacteria 5326
21 Ga0068856_100154251 3300005614 Bacteria 2306
22 Ga0068859_100000015 3300005617 Bacteria 271458
23 Ga0068859_100054758 3300005617 Bacteria 4013
24 Ga0068864_100234587 3300005618 Bacteria 1698
25 Ga0068863_100054463 3300005841 Bacteria 3790
26 Ga0068863_100233853 3300005841 Bacteria 1773
27 Ga0068871_100040644 3300006358 Bacteria 3726
28 Ga0075428_100000173 3300006844 Bacteria 59939
29 Ga0097620_100000015 3300006931 Bacteria 271458
30 Ga0097620_100054758 3300006931 Bacteria 4013
31 Ga0075435_100071102 3300007076 Bacteria 2841
32 Ga0105240_10077257 3300009093 Bacteria 4102
33 Ga0111539_10053946 3300009094 Bacteria 4785
34 Ga0111539_10089478 3300009094 Bacteria 3617
35 Ga0111539_10132831 3300009094 Unclassified 2915
36 Ga0105242_10027504 3300009176 Unclassified 4517
37 Ga0105242_10119637 3300009176 Bacteria 2258
38 Ga0105238_10014822 3300009551 Bacteria 7886
39 Ga0105249_10318582 3300009553 Bacteria 1565
40 Ga0157374_10034091 3300013296 Bacteria 4648
41 Ga0157375_10000006 3300013308 Bacteria 384086
42 Ga0207694_10009533 3300025924 Bacteria 7323
43 Ga0207664_10011130 3300025929 Bacteria 6376
44 Ga0207670_10018574 3300025936 Bacteria 4231
45 Ga0207670_10027468 3300025936 Bacteria 3598
46 Ga0207661_10178971 3300025944 Bacteria 1851
47 Ga0207702_10001031 3300026078 Bacteria 28566
48 Ga0207702_10023846 3300026078 Bacteria 5075
49 Ga0207676_10168077 3300026095 Bacteria 1908
50 Ga0207674_10087577 3300026116 Bacteria 3107
51 Ga0207674_10303695 3300026116 Bacteria 1545
52 Ga0265337_1001005 3300028556 Bacteria 14706
53 Ga0265326_10006835 3300028558 Bacteria 3520
54 Ga0265334_10008705 3300028573 Bacteria 4309
55 Ga0265318_10033316 3300028577 Unclassified 1990
56 Ga0265336_10004303 3300028666 Bacteria 5410
57 Ga0265338_10000041 3300028800 Bacteria 230676
58 Ga0265338_10002809 3300028800 Bacteria 25418
59 Ga0265338_10011330 3300028800 Bacteria 10316
60 Ga0265338_10031110 3300028800 Bacteria 5237
61 Ga0265338_10034137 3300028800 Bacteria 4922
62 Ga0265338_10125295 3300028800 Bacteria 2039
63 Ga0265338_10183026 3300028800 Bacteria 1595
64 Ga0265324_10009372 3300029957 Bacteria 3827
65 Ga0265324_10017012 3300029957 Bacteria 2647
66 Ga0265324_10027911 3300029957 Bacteria 1992
67 Ga0265320_10000939 3300031240 Bacteria 21724
68 Ga0265325_10051692 3300031241 Unclassified 2112
69 Ga0265340_10002142 3300031247 Bacteria 11320
70 Ga0265340_10062646 3300031247 Bacteria 1776
71 Ga0265339_10030908 3300031249 Bacteria 3029
72 Ga0265327_10003831 3300031251 Bacteria 13892
73 Ga0265316_10084937 3300031344 Bacteria 2423
74 Ga0265316_10111975 3300031344 Bacteria 2066
75 Ga0265314_10028734 3300031711 Unclassified 4142
76 Ga0265314_10034589 3300031711 Bacteria 3691
77 Ga0373933_0032958 3300035724 Bacteria 3011
78 Ga0373937_0023848 3300036401 Bacteria 5516
79 Ga0395905_0043268 3300037471 Bacteria 4225
80 Ga0451577_0000289 3300042876 Bacteria 97928
81 Ga0451577_0011811 3300042876 Bacteria 8239
82 Ga0451577_0012622 3300042876 Bacteria 7927
83 Ga0451577_0235828 3300042876 Bacteria 1655
84 Ga0453684_0002261 3300044712 Bacteria 47581
85 Ga0453684_0008573 3300044712 Bacteria 18245
86 Ga0453684_0096060 3300044712 Bacteria 3642
87 Ga0451576_0070440 3300045051 Unclassified 3640
88 Ga0451576_0074766 3300045051 Bacteria 3525
89 Ga0451576_0126666 3300045051 Bacteria 2661
90 Ga0451576_0277084 3300045051 Bacteria 1754
91 Ga0495592_0000087 3300046454 Bacteria 81851
92 Ga0495592_0105580 3300046454 Bacteria 2001
93 Ga0495629_0156928 3300046459 Unclassified 1581
94 Ga0495664_0079789 3300046477 Unclassified 1961
95 Ga0495618_0001404 3300046514 Bacteria 16217
96 Ga0495628_0000056 3300046516 Bacteria 89432
97 Ga0495630_0000365 3300046517 Bacteria 35847
98 Ga0495630_0008902 3300046517 Bacteria 7207
99 Ga0495666_0010194 3300046526 Bacteria 4687
100 Ga0495666_0041693 3300046526 Bacteria 2222
101 Ga0495652_0123983 3300046529 Bacteria 2056
102 Ga0495652_0125085 3300046529 Unclassified 2044
103 Ga0495640_0061124 3300046533 Unclassified 2560
104 Ga0495586_0000240 3300046535 Bacteria 36564
105 Ga0495586_0001264 3300046535 Bacteria 14169
106 Ga0495586_0003385 3300046535 Bacteria 8552
107 Ga0495645_0036588 3300046543 Bacteria 3578
108 Ga0495658_0002913 3300046683 Bacteria 8592
109 Ga0495658_0097381 3300046683 Bacteria 1751
110 Ga0495658_0113764 3300046683 Unclassified 1630
111 Ga0495674_0039398 3300047319 Unclassified 4236
112 Ga0495676_0033153 3300047321 Unclassified 4352
113 Ga0501032_0048714 3300049569 Bacteria 2861
114 Ga0501043_0218963 3300049579 Unclassified 1473
115 Ga0501035_0114742 3300049822 Bacteria 2358
116 Ga0501044_0025644 3300049823 Bacteria 6249
117 nmdc:mga09592_154630_c1 3300050508 Bacteria 1980
118 nmdc:mga0qj67_143027_c1 3300050509 Bacteria 1939
119 nmdc:mga08y16_118074_c1 3300050511 Bacteria 2760
120 Ga0075429_100159236
121 Ga0070658_10063449
122 Ga0070683_100206553
123 Ga0070690_100052295
124 Ga0070666_10061773
125 Ga0070689_100005428
126 Ga0070689_100009426
127 Ga0070689_100060406
128 Ga0070689_100076307
129 Ga0070714_100018261
130 Ga0070678_100214785
131 Ga0070681_10014244
132 Ga0068867_100211930
133 Ga0070685_10089419
134 Ga0070686_100005871
135 Ga0070704_100014754
136 Ga0068855_100062449
137 Ga0068857_100073616
138 Ga0068856_100000317
139 Ga0068856_100029872
140 Ga0068856_100154251
141 Ga0068859_100000015
142 Ga0068859_100054758
143 Ga0068864_100234587
144 Ga0068863_100054463
145 Ga0068863_100233853
146 Ga0068871_100040644
147 Ga0075428_100000173
148 Ga0097620_100000015
149 Ga0097620_100054758
150 Ga0075435_100071102
151 Ga0105240_10077257
152 Ga0111539_10053946
153 Ga0111539_10089478
154 Ga0111539_10132831
155 Ga0105242_10027504
156 Ga0105242_10119637
157 Ga0105238_10014822
158 Ga0105249_10318582
159 Ga0157374_10034091
160 Ga0157375_10000006
161 Ga0207694_10009533
162 Ga0207664_10011130
163 Ga0207670_10018574
164 Ga0207670_10027468
165 Ga0207661_10178971
166 Ga0207702_10001031
167 Ga0207702_10023846
168 Ga0207676_10168077
169 Ga0207674_10087577
170 Ga0207674_10303695
171 Ga0265337_1001005
172 Ga0265326_10006835
173 Ga0265334_10008705
174 Ga0265318_10033316
175 Ga0265336_10004303
176 Ga0265338_10000041
177 Ga0265338_10002809
178 Ga0265338_10011330
179 Ga0265338_10031110
180 Ga0265338_10034137
181 Ga0265338_10125295
182 Ga0265338_10183026
183 Ga0265324_10009372
184 Ga0265324_10017012
185 Ga0265324_10027911
186 Ga0265320_10000939
187 Ga0265325_10051692
188 Ga0265340_10002142
189 Ga0265340_10062646
190 Ga0265339_10030908
191 Ga0265327_10003831
192 Ga0265316_10084937
193 Ga0265316_10111975
194 Ga0265314_10028734
195 Ga0265314_10034589
196 Ga0373933_0032958
197 Ga0373937_0023848
198 Ga0395905_0043268
199 Ga0451577_0000289
200 Ga0451577_0011811
201 Ga0451577_0012622
202 Ga0451577_0235828
203 Ga0453684_0002261
204 Ga0453684_0008573
205 Ga0453684_0096060
206 Ga0451576_0070440
207 Ga0451576_0074766
208 Ga0451576_0126666
209 Ga0451576_0277084
210 Ga0495592_0000087
211 Ga0495592_0105580
212 Ga0495629_0156928
213 Ga0495664_0079789
214 Ga0495618_0001404
215 Ga0495628_0000056
216 Ga0495630_0000365
217 Ga0495630_0008902
218 Ga0495666_0010194
219 Ga0495666_0041693
220 Ga0495652_0123983
221 Ga0495652_0125085
222 Ga0495640_0061124
223 Ga0495586_0000240
224 Ga0495586_0001264
225 Ga0495586_0003385
226 Ga0495645_0036588
227 Ga0495658_0002913
228 Ga0495658_0097381
229 Ga0495658_0113764
230 Ga0495674_0039398
231 Ga0495676_0033153
232 Ga0501032_0048714
233 Ga0501043_0218963
234 Ga0501035_0114742
235 Ga0501044_0025644
236 nmdc:mga09592_154630_c1
237 nmdc:mga0qj67_143027_c1
238 nmdc:mga08y16_118074_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12832

MFS_1_like

MFS_1 like family

44

229

0.9

PF07690

MFS_1

Major Facilitator Superfamily

75

385

0.89

PF07690

MFS_1

Major Facilitator Superfamily

374

486

0.89

PF00083

Sugar_tr

Sugar (and other) transporter

62

163

0.86

PF03825

Nuc_H_symport

Nucleoside H+ symporter

61

250

0.86

PF13347

MFS_2

MFS/sugar transport protein

82

413

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.8863 7 410
7lo7-assembly1.cif.gz_Z nora in complex with fab25 0.8655 1 412
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.858 7 410
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.8531 1 412
7lo7-assembly1.cif.gz_Z nora in complex with fab25 0.8431 1 412
ID Description Score Start End Superfamily
af_A0A0R0F726_79_268_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8968 7 189 1.20.1250.20
af_Q2G1N0_6_195_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.895 7 189 1.20.1250.20
af_A4I8Z5_294_489_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8906 7 185 1.20.1250.20
af_Q18797_15_402_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8895 7 412 1.20.1250.20
af_Q8BH31_42_222_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8893 10 174 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A6N6PV68-F1-model_v4 TCR/Tet family MFS transporter 0.9771 3 414 GO:0005886
GO:0022857
AF-A0A6N6PV68-F1-model_v4 TCR/Tet family MFS transporter 0.9609 3 414 GO:0005886
GO:0022857
AF-A0A1Q7YRC8-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9562 182 414 GO:0005886
GO:0022857
AF-A0A7Y4QI77-F1-model_v4 MFS transporter 0.9495 1 322 GO:0005886
GO:0022857
AF-A0A2V7GNX8-F1-model_v4 Tetracycline resistance MFS efflux pump 0.9465 7 376 GO:0005886
GO:0022857

Map