F099518
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 118 | 91 | 236 | 420 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2981284811|2981285255 |
| Length | 465 |
| Sequence | FSFSIIACWIKKSMAFLSKFDKIVEVFILLTKTAKGCIVLNQSKFIGVHERPPLLQSLPLSLQHLFAMFGATVLVPFLFDVDPATILLMNGIGTLLYLWICKGKIPAYLGSSFAFLSPVFAVLGAGLPYEAALGGFIVSGIIFSLVALLIRAVGTRWLDIVFPPAAMGAIVTVIGLELVPVAAEMAGFIKPATATEWSPDPKAIIVSSVTLIITIVGSVVFRGFLKIIPILVGIVCGYILAYFMGFVKFGAVMEADVLALPTFYYPQFSITAIMIIAPAALVVIAEHIGHLIVTGNIVGKDLSKDPGLDRSLFGNGISTILSGFVGSTPNTTYGENIGVLAISRVYSTWVIGGAAIIAIILSFFGKLTELIKTIPVPVMGGVCLLLFGVIATSGVRMLVETKVDYSKASNLILTSIVLVIGVSGATLTIGSFSLKGMALATVLAIIISLFFKLLEQLNLMNEPRK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 2 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 3 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 4 | 3300003841 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 5 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 6 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 7 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 8 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 9 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 10 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 11 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 12 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 13 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 14 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 15 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 17 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 18 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 19 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 20 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 21 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 22 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 23 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 24 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 25 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 26 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 27 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 28 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 29 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 30 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 31 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 32 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 33 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 34 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 35 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 36 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 37 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 38 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 39 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 40 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 41 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 42 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 43 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 44 | 3300049127 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 45 | 2981284811 | Paenibacillus sp. PvR052 | Isolate | Rhizosphere |
| 46 | 2512564039 | Paenibacillus mucilaginosus 3016 | Isolate | Rhizosphere |
| 47 | 2524023129 | Paenibacillus pinihumi DSM 23905 | Isolate | Rhizosphere |
| 48 | 2554235469 | Sporolactobacillus laevolacticus DSM 442 | Isolate | Rhizosphere |
| 49 | 2585428059 | Paenibacillus chondroitinus OK414 | Isolate | Rhizosphere |
| 50 | 2593339131 | Bacillus sp. UNCCL81 | Isolate | Unclassified |
| 51 | 2593339198 | Paenibacillus sp. UNCCL117 | Isolate | Unclassified |
| 52 | 2643221676 | Paenibacillus sp. Root444D2 | Isolate | Unclassified |
| 53 | 2671180694 | Paenibacillus sp. A3 | Isolate | Unclassified |
| 54 | 2711768088 | Sporolactobacillus terrae DSM 11697 | Isolate | Rhizosphere |
| 55 | 2738543017 | Bacillus sp. OV186 | Isolate | Unclassified |
| 56 | 2757320391 | Bacillus sp. NFR08 | Isolate | Rhizoplane |
| 57 | 2775507177 | Bacillus sp. AFS055030 | Isolate | Unclassified |
| 58 | 2775507192 | Bacillus sp. AFS041924 | Isolate | Unclassified |
| 59 | 2791355222 | Paenibacillus oryzae 1DrF-4 | Isolate | Unclassified |
| 60 | 2818991459 | Paenibacillus sp. 597 | Isolate | Unclassified |
| 61 | 2857586860 | Bacillus sp. R-71935 | Isolate | Unclassified |
| 62 | 2857604169 | Domibacillus sp. R-71921 | Isolate | Unclassified |
| 63 | 2857609550 | Domibacillus sp. R-71929 | Isolate | Unclassified |
| 64 | 2864997549 | Paenibacillus sp. R-72005 | Isolate | Unclassified |
| 65 | 2865002811 | Paenibacillus sp. R-74131 | Isolate | Unclassified |
| 66 | 2881644220 | Siminovitchia terrae LMG 29736 | Isolate | Rhizosphere |
| 67 | 2888578766 | Paenibacillus lycopersici 12200R-189 | Isolate | Rhizosphere |
| 68 | 2889049205 | Paenibacillus rhizovicinus 14171R-81 | Isolate | Rhizosphere |
| 69 | 2889295896 | Paenibacillus sp. PvR098 | Isolate | Rhizosphere |
| 70 | 2904113452 | Paenibacillus paridis py1325 | Isolate | Unclassified |
| 71 | 2904755435 | Paenibacillus aceris KACC 19194 | Isolate | Rhizosphere |
| 72 | 2919425241 | Bacillus sp. 3255 | Isolate | Rhizosphere |
| 73 | 2925326138 | Paenibacillus hemerocallicola KCTC 33185 | Isolate | Unclassified |
| 74 | 2936340661 | Gottfriedia acidiceleris 1-17 | Isolate | Rhizosphere |
| 75 | 2980125574 | Paenibacillus sp. tmac-D7 | Isolate | Unclassified |
| 76 | 2981289755 | Paenibacillus sp. PvR148 | Isolate | Rhizosphere |
| 77 | 2981980479 | Paenibacillus sp. PvR018 | Isolate | Rhizosphere |
| 78 | 2981985349 | Paenibacillus sp. PvR053 | Isolate | Rhizosphere |
| 79 | 3001267043 | Bacillus sp. FJAT-49870 | Isolate | Rhizosphere |
| 80 | 3001272096 | Lederbergia citrisecunda FJAT-49732 | Isolate | Rhizosphere |
| 81 | 3006969106 | Bacillus sp. FJAT-50079 | Isolate | Rhizosphere |
| 82 | 3006984091 | Lederbergia citrea FJAT-49754 | Isolate | Rhizosphere |
| 83 | 3006988479 | Bacillus sp. FJAT-49711 | Isolate | Rhizosphere |
| 84 | 8002317523 | Cohnella sp. GbtcB17 | Isolate | Unclassified |
| 85 | 8007375930 | Clostridium sp. YIM B02565 | Isolate | Unclassified |
| 86 | 8046991243 | Cohnella rhizosphaerae DSM 28161 | Isolate | Rhizosphere |
| 87 | 8054795415 | Paenibacillus periandrae PM10 | Isolate | Nodule |
| 88 | 8055632911 | Paenibacillus radicibacter N1-5-1-14 | Isolate | Unclassified |
| 89 | 8057473075 | Paenibacillus endoradicis T3-5-0-4 | Isolate | Unclassified |
| 90 | 8057733483 | Paenibacillus apiarius MW-14 | Isolate | Rhizosphere |
| 91 | 8057977335 | Paenibacillus oenotherae DT7-4 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 59.32 |
| Metatranscriptomes | 0.85 |
| Isolates | 39.83 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 15.25 |
| Nodule | 4.24 |
| Rhizoplane | 0.85 |
| Rhizosphere | 39.83 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25151J46595_10001022 | 3300003187 | Bacteria | 21009 |
| 2 | JGI25151J46595_10010155 | 3300003187 | Bacteria | 4396 |
| 3 | JGI25151J46595_10012287 | 3300003187 | Bacteria | 3901 |
| 4 | Ga0055538_1000249 | 3300003751 | Bacteria | 28921 |
| 5 | Ga0055532_1000004 | 3300003758 | Bacteria | 471824 |
| 6 | Ga0055541_1000228 | 3300003841 | Bacteria | 21445 |
| 7 | Ga0079104_1000112 | 3300006946 | Bacteria | 116581 |
| 8 | Ga0079104_1006071 | 3300006946 | Bacteria | 4669 |
| 9 | Ga0105250_10000011 | 3300009092 | Bacteria | 276144 |
| 10 | Ga0157373_10000739 | 3300013100 | Bacteria | 25327 |
| 11 | Ga0209784_100097 | 3300025224 | Bacteria | 104918 |
| 12 | Ga0209566_100049 | 3300025225 | Bacteria | 240746 |
| 13 | Ga0209566_100133 | 3300025225 | Bacteria | 91857 |
| 14 | Ga0209566_100921 | 3300025225 | Bacteria | 13720 |
| 15 | Ga0209147_100010 | 3300025229 | Bacteria | 741391 |
| 16 | Ga0209258_102212 | 3300025242 | Bacteria | 5290 |
| 17 | Ga0209675_1016460 | 3300025291 | Bacteria | 2153 |
| 18 | Ga0209676_1000925 | 3300025292 | Bacteria | 36280 |
| 19 | Ga0209025_1000673 | 3300025294 | Bacteria | 58896 |
| 20 | Ga0209025_1003189 | 3300025294 | Bacteria | 15907 |
| 21 | Ga0209025_1005537 | 3300025294 | Bacteria | 10248 |
| 22 | Ga0209025_1014972 | 3300025294 | Bacteria | 4720 |
| 23 | Ga0207696_1000026 | 3300025711 | Bacteria | 418166 |
| 24 | Ga0209281_1000153 | 3300027111 | Bacteria | 166921 |
| 25 | Ga0209281_1000198 | 3300027111 | Bacteria | 136459 |
| 26 | Ga0265336_10002047 | 3300028666 | Bacteria | 8587 |
| 27 | Ga0373951_0002205 | 3300035091 | Bacteria | 4953 |
| 28 | Ga0439439_0000128 | 3300041406 | Bacteria | 10645 |
| 29 | Ga0439433_0016959 | 3300041999 | Bacteria | 1615 |
| 30 | Ga0439449_0001797 | 3300042007 | Bacteria | 8440 |
| 31 | Ga0439462_0032809 | 3300042015 | Bacteria | 1376 |
| 32 | Ga0451577_0026199 | 3300042876 | Bacteria | 5280 |
| 33 | Ga0451577_0076216 | 3300042876 | Bacteria | 2990 |
| 34 | Ga0466969_0005896 | 3300044656 | Bacteria | 6513 |
| 35 | Ga0453683_0018753 | 3300044673 | Bacteria | 4439 |
| 36 | Ga0453683_0072472 | 3300044673 | Bacteria | 2156 |
| 37 | Ga0466961_0049080 | 3300044693 | Bacteria | 2698 |
| 38 | Ga0453684_0026261 | 3300044712 | Bacteria | 8423 |
| 39 | Ga0466968_0040075 | 3300044735 | Bacteria | 1974 |
| 40 | Ga0466959_0001172 | 3300045049 | Bacteria | 15783 |
| 41 | Ga0451576_0016097 | 3300045051 | Bacteria | 8262 |
| 42 | Ga0451576_0068223 | 3300045051 | Bacteria | 3701 |
| 43 | Ga0451576_0117040 | 3300045051 | Bacteria | 2774 |
| 44 | Ga0495590_0013026 | 3300046457 | Bacteria | 3067 |
| 45 | Ga0495672_0041335 | 3300047320 | Bacteria | 2789 |
| 46 | Ga0496116_0009862 | 3300048919 | Bacteria | 8082 |
| 47 | Ga0496116_0027070 | 3300048919 | Bacteria | 4178 |
| 48 | Ga0496116_0036173 | 3300048919 | Bacteria | 3459 |
| 49 | Ga0496116_0052904 | 3300048919 | Bacteria | 2686 |
| 50 | Ga0496117_0027738 | 3300048920 | Bacteria | 4403 |
| 51 | Ga0496118_0041573 | 3300048921 | Bacteria | 3637 |
| 52 | Ga0496119_0001668 | 3300048922 | Bacteria | 25943 |
| 53 | Ga0496119_0003044 | 3300048922 | Bacteria | 17743 |
| 54 | Ga0496120_0000059 | 3300048923 | Bacteria | 176517 |
| 55 | Ga0496121_0058138 | 3300048924 | Bacteria | 3199 |
| 56 | Ga0496122_0014499 | 3300048925 | Bacteria | 7610 |
| 57 | Ga0496122_0029141 | 3300048925 | Bacteria | 4664 |
| 58 | Ga0496122_0036573 | 3300048925 | Bacteria | 3966 |
| 59 | Ga0496122_0104833 | 3300048925 | Bacteria | 1877 |
| 60 | Ga0496123_0009325 | 3300048926 | Bacteria | 8855 |
| 61 | Ga0496123_0048590 | 3300048926 | Bacteria | 2853 |
| 62 | Ga0496124_0001207 | 3300048927 | Bacteria | 40038 |
| 63 | Ga0496124_0002039 | 3300048927 | Bacteria | 27457 |
| 64 | Ga0496125_0000528 | 3300048928 | Bacteria | 65874 |
| 65 | Ga0496125_0001602 | 3300048928 | Bacteria | 31984 |
| 66 | Ga0496125_0003519 | 3300048928 | Bacteria | 18899 |
| 67 | Ga0496125_0023484 | 3300048928 | Bacteria | 5690 |
| 68 | Ga0496126_0000030 | 3300048929 | Bacteria | 386461 |
| 69 | Ga0496126_0013701 | 3300048929 | Bacteria | 8230 |
| 70 | Ga0496126_0014357 | 3300048929 | Bacteria | 8009 |
| 71 | Ga0501306_004183 | 3300049127 | Bacteria | 1603 |
| 72 | 2981285255 | 2981284811 | Bacteria | 4641497 |
| 73 | 2512735144 | 2512564039 | Bacteria | 8739048 |
| 74 | 2524189050 | 2524023129 | Bacteria | 6762600 |
| 75 | 2556065948 | 2554235469 | Bacteria | 3590176 |
| 76 | 2587737636 | 2585428059 | Bacteria | 8696589 |
| 77 | 2595089118 | 2593339131 | Bacteria | 5116855 |
| 78 | 2595315204 | 2593339198 | Bacteria | 7267884 |
| 79 | 2644423287 | 2643221676 | Bacteria | 8119172 |
| 80 | 2673821437 | 2671180694 | Bacteria | 7506943 |
| 81 | 2712199839 | 2711768088 | Bacteria | 3195027 |
| 82 | 2739268652 | 2738543017 | Bacteria | 4271950 |
| 83 | 2757564860 | 2757320391 | Bacteria | 4746095 |
| 84 | 2777763030 | 2775507177 | Bacteria | 4384303 |
| 85 | 2777836900 | 2775507192 | Bacteria | 4622234 |
| 86 | 2793181589 | 2791355222 | Bacteria | 5898266 |
| 87 | 2819670799 | 2818991459 | Bacteria | 8736032 |
| 88 | 2857587596 | 2857586860 | Bacteria | 4354574 |
| 89 | 2857607416 | 2857604169 | Bacteria | 5111450 |
| 90 | 2857610117 | 2857609550 | Bacteria | 3753890 |
| 91 | 2864999202 | 2864997549 | Bacteria | 5139696 |
| 92 | 2865004460 | 2865002811 | Bacteria | 6333767 |
| 93 | 2881647905 | 2881644220 | Bacteria | 5302661 |
| 94 | 2888583935 | 2888578766 | Bacteria | 6743310 |
| 95 | 2889053620 | 2889049205 | Bacteria | 7524325 |
| 96 | 2889296782 | 2889295896 | Bacteria | 4704906 |
| 97 | 2904116871 | 2904113452 | Bacteria | 7796941 |
| 98 | 2904755981 | 2904755435 | Bacteria | 7986759 |
| 99 | 2919429100 | 2919425241 | Bacteria | 8055701 |
| 100 | 2925330743 | 2925326138 | Bacteria | 9652120 |
| 101 | 2936343945 | 2936340661 | Bacteria | 5139038 |
| 102 | 2980125980 | 2980125574 | Bacteria | 5567337 |
| 103 | 2981290200 | 2981289755 | Bacteria | 4641509 |
| 104 | 2981981169 | 2981980479 | Bacteria | 4641628 |
| 105 | 2981986058 | 2981985349 | Bacteria | 4641497 |
| 106 | 3001269864 | 3001267043 | Bacteria | 4823521 |
| 107 | 3001275200 | 3001272096 | Bacteria | 4729684 |
| 108 | 3006969630 | 3006969106 | Bacteria | 4739423 |
| 109 | 3006986381 | 3006984091 | Bacteria | 4207523 |
| 110 | 3006990637 | 3006988479 | Bacteria | 4767936 |
| 111 | 8002322811 | 8002317523 | Bacteria | 8051857 |
| 112 | 8007377063 | 8007375930 | Bacteria | 4080554 |
| 113 | 8046999003 | 8046991243 | Bacteria | 8497463 |
| 114 | 8054804068 | 8054795415 | Bacteria | 9785225 |
| 115 | 8055634843 | 8055632911 | Bacteria | 5283357 |
| 116 | 8057474783 | 8057473075 | Bacteria | 5892720 |
| 117 | 8057737343 | 8057733483 | Bacteria | 6578323 |
| 118 | 8057977750 | 8057977335 | Bacteria | 5694872 |
| 119 | JGI25151J46595_10001022 | |||
| 120 | JGI25151J46595_10010155 | |||
| 121 | JGI25151J46595_10012287 | |||
| 122 | Ga0055538_1000249 | |||
| 123 | Ga0055532_1000004 | |||
| 124 | Ga0055541_1000228 | |||
| 125 | Ga0079104_1000112 | |||
| 126 | Ga0079104_1006071 | |||
| 127 | Ga0105250_10000011 | |||
| 128 | Ga0157373_10000739 | |||
| 129 | Ga0209784_100097 | |||
| 130 | Ga0209566_100049 | |||
| 131 | Ga0209566_100133 | |||
| 132 | Ga0209566_100921 | |||
| 133 | Ga0209147_100010 | |||
| 134 | Ga0209258_102212 | |||
| 135 | Ga0209675_1016460 | |||
| 136 | Ga0209676_1000925 | |||
| 137 | Ga0209025_1000673 | |||
| 138 | Ga0209025_1003189 | |||
| 139 | Ga0209025_1005537 | |||
| 140 | Ga0209025_1014972 | |||
| 141 | Ga0207696_1000026 | |||
| 142 | Ga0209281_1000153 | |||
| 143 | Ga0209281_1000198 | |||
| 144 | Ga0265336_10002047 | |||
| 145 | Ga0373951_0002205 | |||
| 146 | Ga0439439_0000128 | |||
| 147 | Ga0439433_0016959 | |||
| 148 | Ga0439449_0001797 | |||
| 149 | Ga0439462_0032809 | |||
| 150 | Ga0451577_0026199 | |||
| 151 | Ga0451577_0076216 | |||
| 152 | Ga0466969_0005896 | |||
| 153 | Ga0453683_0018753 | |||
| 154 | Ga0453683_0072472 | |||
| 155 | Ga0466961_0049080 | |||
| 156 | Ga0453684_0026261 | |||
| 157 | Ga0466968_0040075 | |||
| 158 | Ga0466959_0001172 | |||
| 159 | Ga0451576_0016097 | |||
| 160 | Ga0451576_0068223 | |||
| 161 | Ga0451576_0117040 | |||
| 162 | Ga0495590_0013026 | |||
| 163 | Ga0495672_0041335 | |||
| 164 | Ga0496116_0009862 | |||
| 165 | Ga0496116_0027070 | |||
| 166 | Ga0496116_0036173 | |||
| 167 | Ga0496116_0052904 | |||
| 168 | Ga0496117_0027738 | |||
| 169 | Ga0496118_0041573 | |||
| 170 | Ga0496119_0001668 | |||
| 171 | Ga0496119_0003044 | |||
| 172 | Ga0496120_0000059 | |||
| 173 | Ga0496121_0058138 | |||
| 174 | Ga0496122_0014499 | |||
| 175 | Ga0496122_0029141 | |||
| 176 | Ga0496122_0036573 | |||
| 177 | Ga0496122_0104833 | |||
| 178 | Ga0496123_0009325 | |||
| 179 | Ga0496123_0048590 | |||
| 180 | Ga0496124_0001207 | |||
| 181 | Ga0496124_0002039 | |||
| 182 | Ga0496125_0000528 | |||
| 183 | Ga0496125_0001602 | |||
| 184 | Ga0496125_0003519 | |||
| 185 | Ga0496125_0023484 | |||
| 186 | Ga0496126_0000030 | |||
| 187 | Ga0496126_0013701 | |||
| 188 | Ga0496126_0014357 | |||
| 189 | Ga0501306_004183 | |||
| 190 | 2981285255 | |||
| 191 | 2512735144 | |||
| 192 | 2524189050 | |||
| 193 | 2556065948 | |||
| 194 | 2587737636 | |||
| 195 | 2595089118 | |||
| 196 | 2595315204 | |||
| 197 | 2644423287 | |||
| 198 | 2673821437 | |||
| 199 | 2712199839 | |||
| 200 | 2739268652 | |||
| 201 | 2757564860 | |||
| 202 | 2777763030 | |||
| 203 | 2777836900 | |||
| 204 | 2793181589 | |||
| 205 | 2819670799 | |||
| 206 | 2857587596 | |||
| 207 | 2857607416 | |||
| 208 | 2857610117 | |||
| 209 | 2864999202 | |||
| 210 | 2865004460 | |||
| 211 | 2881647905 | |||
| 212 | 2888583935 | |||
| 213 | 2889053620 | |||
| 214 | 2889296782 | |||
| 215 | 2904116871 | |||
| 216 | 2904755981 | |||
| 217 | 2919429100 | |||
| 218 | 2925330743 | |||
| 219 | 2936343945 | |||
| 220 | 2980125980 | |||
| 221 | 2981290200 | |||
| 222 | 2981981169 | |||
| 223 | 2981986058 | |||
| 224 | 3001269864 | |||
| 225 | 3001275200 | |||
| 226 | 3006969630 | |||
| 227 | 3006986381 | |||
| 228 | 3006990637 | |||
| 229 | 8002322811 | |||
| 230 | 8007377063 | |||
| 231 | 8046999003 | |||
| 232 | 8054804068 | |||
| 233 | 8055634843 | |||
| 234 | 8057474783 | |||
| 235 | 8057737343 | |||
| 236 | 8057977750 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5xls-assembly1.cif.gz_A-2 | crystal structure of uraa in occluded conformation | 0.9352 | 8 | 413 |
| 5xls-assembly1.cif.gz_A-2 | crystal structure of uraa in occluded conformation | 0.9154 | 8 | 413 |
| 5i6c-assembly1.cif.gz_A | the structure of the eukaryotic purine/h+ symporter, uapa, in complex with xanthine | 0.8117 | 8 | 415 |
| 3qe7-assembly1.cif.gz_A | crystal structure of uracil transporter--uraa | 0.8096 | 8 | 413 |
| 5i6c-assembly1.cif.gz_B | the structure of the eukaryotic purine/h+ symporter, uapa, in complex with xanthine | 0.8055 | 8 | 415 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q5A1D7_182_536_1.20.1730.10 | Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter | 0.7998 | 117 | 416 | 1.20.1730.10 |
| af_Q57772_21_432_1.20.1740.10 | Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I | 0.7611 | 16 | 414 | 1.20.1740.10 |
| af_Q57772_21_432_1.20.1740.10 | Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I | 0.7114 | 16 | 414 | 1.20.1740.10 |
| af_Q5A1D7_182_536_1.20.1730.10 | Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter | 0.6854 | 117 | 416 | 1.20.1730.10 |
| af_P76103_4_381_1.20.1740.10 | Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I | 0.6828 | 14 | 413 | 1.20.1740.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-S7STZ6-F1-model_v4 | Uracil permease | 0.9495 | 51 | 415 |
GO:0005886
GO:0042907 |
| AF-A0A0Q1IK32-F1-model_v4 | Uracil permease | 0.9454 | 5 | 415 |
GO:0005886
GO:0042907 |
| AF-A0A317Z9F8-F1-model_v4 | Uracil permease | 0.9422 | 72 | 284 |
GO:0005886
GO:0042907 |
| AF-A0A7Z9D4H1-F1-model_v4 | deleted | 0.94 | 124 | 422 |
|
| AF-A0A7V4NFH1-F1-model_v4 | Uracil permease | 0.9371 | 129 | 418 |
GO:0005886
GO:0042907 |