F099368

General Info

Members Datasets Scaffolds Average Seq Length
118 101 115 282

Family's Representative Sequence

Representative Sequence 3300055283|Ga0500661_004407|Ga0500661_004407_508_1512
Length 334
Sequence MEGCVLTLLCRRLQRAVVQGQRVYPSGWTGISRDMMRERLRRAKMNTEGQRGAGSTMIDCHTHLWKAEDWSEEMEREATIARGAPAMIEISEEEHWEAMKGVDRAIVFGFHARHLGLVVPNERVRSYVAKHPEKLIGFACLDPHEPDYLDEMEKVFLKDGFRGLKLAPIYQNYHPMDPRMQPVYSFCEKHGIPILIHQGTTFPRRAPLKYSLPIQIEDVALEYPKLKIVIAHMGHPWTADTVVLIRKQPNVFSDISALYYRPWQFYNALMLAQEYGAGHKLLFGTDYPFTTVEDTVNALQNINDITGTSGLPRIAEKLTEGIIKRDTLALLEIN

Samples

Sample ID Description Type Environment
1 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
2 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
3 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
36 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
47 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
48 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
54 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
55 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
56 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
57 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
58 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
59 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
62 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
63 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
64 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
65 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
69 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
72 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
73 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
74 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
75 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
76 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
77 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
78 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
79 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
84 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
85 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
86 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
89 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
90 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
91 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
92 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
93 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
94 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
95 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
96 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
97 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
98 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
99 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
100 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
101 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.46
Metatranscriptomes 0
Isolates 2.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.17
Nodule 0
Rhizoplane 2.54
Rhizosphere 78.81
Stem 0
Stem Tuber 0
Unclassified 8.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10080152 3300003316 Unclassified 3548
2 rootH2_10162954 3300003320 Bacteria 3349
3 rootL2_10218178 3300003322 Bacteria 12405
4 Ga0070683_100313735 3300005329 Unclassified 1492
5 Ga0070689_100423808 3300005340 Unclassified 1128
6 Ga0070675_100022573 3300005354 Bacteria 5029
7 Ga0070705_100017715 3300005440 Bacteria 3722
8 Ga0070694_100054464 3300005444 Bacteria 2710
9 Ga0070698_100052313 3300005471 Bacteria 4155
10 Ga0070699_100059562 3300005518 Bacteria 3307
11 Ga0070686_100418813 3300005544 Unclassified 1023
12 Ga0070686_100492850 3300005544 Bacteria 949
13 Ga0070695_100075015 3300005545 Bacteria 2224
14 Ga0070665_100000402 3300005548 Bacteria 63283
15 Ga0070665_100000729 3300005548 Bacteria 43811
16 Ga0070665_100166967 3300005548 Unclassified 2203
17 Ga0070704_100013647 3300005549 Bacteria 5051
18 Ga0070704_100243482 3300005549 Unclassified 1473
19 Ga0068857_100383916 3300005577 Bacteria 1305
20 Ga0068859_100122327 3300005617 Bacteria 2669
21 Ga0081455_10233565 3300005937 Unclassified 1355
22 Ga0075366_10038524 3300006195 Bacteria 2823
23 Ga0075428_100214957 3300006844 Unclassified 2077
24 Ga0075430_100026744 3300006846 Bacteria 4907
25 Ga0075433_10107524 3300006852 Unclassified 2473
26 Ga0097620_100122336 3300006931 Bacteria 2669
27 Ga0105245_10383755 3300009098 Unclassified 1400
28 Ga0114129_11016999 3300009147 Bacteria 1043
29 Ga0105243_10010293 3300009148 Bacteria 7103
30 Ga0105248_10055364 3300009177 Bacteria 4449
31 Ga0105248_10130701 3300009177 Bacteria 2833
32 Ga0105249_10286519 3300009553 Bacteria 1647
33 Ga0157374_10001916 3300013296 Bacteria 17440
34 Ga0157375_10094762 3300013308 Bacteria 3055
35 Ga0163163_10839498 3300014325 Unclassified 982
36 Ga0157380_10505880 3300014326 Bacteria 1175
37 Ga0157377_10053559 3300014745 Bacteria 2282
38 Ga0209566_100103 3300025225 Bacteria 130803
39 Ga0207695_10512637 3300025913 Unclassified 1081
40 Ga0207659_10041800 3300025926 Bacteria 3212
41 Ga0207664_10359870 3300025929 Unclassified 1289
42 Ga0207709_10007116 3300025935 Bacteria 6246
43 Ga0207658_10481309 3300025986 Bacteria 1103
44 Ga0207641_10574369 3300026088 Unclassified 1102
45 Ga0207676_10413336 3300026095 Bacteria 1264
46 Ga0207674_10050543 3300026116 Bacteria 4247
47 Ga0268266_10000210 3300028379 Bacteria 101178
48 Ga0268266_10000405 3300028379 Bacteria 65558
49 Ga0268266_10046286 3300028379 Unclassified 3725
50 Ga0307408_100044783 3300031548 Bacteria 3156
51 Ga0316577_10155440 3300031733 Unclassified 1289
52 Ga0307410_10093166 3300031852 Bacteria 2143
53 Ga0307410_10118492 3300031852 Bacteria 1927
54 Ga0307409_100144160 3300031995 Bacteria 2057
55 Ga0307414_10127517 3300032004 Bacteria 1969
56 Ga0307411_10405491 3300032005 Unclassified 1128
57 Ga0307415_100004756 3300032126 Bacteria 7107
58 Ga0316583_10056976 3300032133 Unclassified 1373
59 Ga0307510_10030949 3300033180 Bacteria 6057
60 Ga0307510_10053991 3300033180 Bacteria 4216
61 Ga0373926_0019741 3300035083 Bacteria 2325
62 Ga0373939_0142854 3300035114 Unclassified 864
63 Ga0373927_0008922 3300035695 Bacteria 6734
64 Ga0373937_0097730 3300036401 Bacteria 2724
65 Ga0373925_0005976 3300037068 Bacteria 9013
66 Ga0395898_0001504 3300037466 Bacteria 32204
67 Ga0395901_0010682 3300038443 Bacteria 9309
68 Ga0436365_1390931 3300039437 Bacteria 2091
69 Ga0466965_0006496 3300044683 Bacteria 5315
70 Ga0466963_0301584 3300044694 Unclassified 1127
71 Ga0466960_0002105 3300044901 Bacteria 7418
72 Ga0451576_0173207 3300045051 Unclassified 2253
73 Ga0466967_0086513 3300045976 Bacteria 2840
74 Ga0495592_0180171 3300046454 Unclassified 1440
75 Ga0495618_0089104 3300046514 Bacteria 1973
76 Ga0495630_0060848 3300046517 Unclassified 2835
77 Ga0495630_0135554 3300046517 Unclassified 1871
78 Ga0495643_0000156 3300046522 Bacteria 111487
79 Ga0495625_0000074 3300046660 Bacteria 164813
80 Ga0495625_0006448 3300046660 Bacteria 10441
81 Ga0495672_0013716 3300047320 Bacteria 5576
82 Ga0496104_0245212 3300048907 Bacteria 1704
83 Ga0496104_0636162 3300048907 Bacteria 976
84 Ga0496105_0036558 3300048908 Unclassified 4046
85 Ga0496124_0103261 3300048927 Bacteria 2306
86 Ga0496126_0000425 3300048929 Bacteria 84939
87 Ga0495682_0033753 3300049460 Unclassified 1888
88 Ga0501034_0003978 3300049571 Bacteria 16604
89 Ga0501040_0133976 3300049576 Bacteria 1743
90 Ga0501047_0095924 3300049581 Bacteria 2844
91 Ga0501070_0001671 3300049586 Bacteria 19655
92 Ga0501073_0012969 3300049589 Bacteria 6075
93 Ga0501074_0001694 3300049590 Bacteria 15014
94 Ga0501074_0012400 3300049590 Bacteria 6196
95 Ga0501076_0250545 3300049592 Bacteria 1449
96 Ga0501079_0185651 3300049741 Bacteria 1623
97 Ga0501080_0038523 3300049742 Bacteria 4462
98 Ga0501081_0078963 3300049743 Bacteria 2301
99 Ga0501044_0172790 3300049823 Bacteria 2131
100 Ga0501044_0374845 3300049823 Bacteria 1339
101 nmdc:mga0qj67_71839_c1 3300050509 Bacteria 2762
102 Ga0495612_0016035 3300053078 Bacteria 3002
103 Ga0495619_0006414 3300053085 Bacteria 7454
104 Ga0495619_0095990 3300053085 Bacteria 2012
105 Ga0500651_0000004 3300053093 Bacteria 389879
106 Ga0500555_004889 3300053103 Unclassified 3801
107 Ga0500556_0001006 3300053104 Bacteria 14879
108 Ga0500595_000041 3300053119 Bacteria 95721
109 Ga0500568_0011257 3300053139 Bacteria 4165
110 Ga0500616_0019120 3300053153 Bacteria 3864
111 Ga0500616_0020729 3300053153 Bacteria 3691
112 Ga0500645_000454 3300053730 Bacteria 28118
113 Ga0501084_0077582 3300054114 Bacteria 2785
114 Ga0500661_004407 3300055283 Bacteria 2636
115 Ga0500661_004970 3300055283 Bacteria 2492

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0172790 Ga0501044_0172790_1402_2085 226
2 3300035114 Ga0373939_0142854 Ga0373939_0142854_32_745 236
3 3300048907 Ga0496104_0636162 Ga0496104_0636162_222_959 245
4 3300049576 Ga0501040_0133976 Ga0501040_0133976_58_882 269
5 3300049592 Ga0501076_0250545 Ga0501076_0250545_604_1428 269
6 3300049741 Ga0501079_0185651 Ga0501079_0185651_385_1209 269
7 3300049743 Ga0501081_0078963 Ga0501081_0078963_387_1211 269
8 3300054114 Ga0501084_0077582 Ga0501084_0077582_1307_2131 269
9 iso_pu_bacteria 2920107658 2920110148 272
10 iso_pu_bacteria 2684623219 2687239665 275
11 3300049571 Ga0501034_0003978 Ga0501034_0003978_5881_6720 276
12 3300049586 Ga0501070_0001671 Ga0501070_0001671_16022_16861 276
13 3300049589 Ga0501073_0012969 Ga0501073_0012969_469_1308 276
14 3300049590 Ga0501074_0001694 Ga0501074_0001694_155_994 276
15 3300049742 Ga0501080_0038523 Ga0501080_0038523_155_994 276
16 3300049823 Ga0501044_0374845 Ga0501044_0374845_152_1036 276
17 3300025225 Ga0209566_100103 Ga0209566_100103101 277
18 3300048927 Ga0496124_0103261 Ga0496124_0103261_155_991 277
19 3300003320 rootH2_10162954 rootH2_101629542 278
20 3300005329 Ga0070683_100313735 Ga0070683_1003137351 278
21 3300005440 Ga0070705_100017715 Ga0070705_1000177153 278
22 3300005444 Ga0070694_100054464 Ga0070694_1000544642 278
23 3300005471 Ga0070698_100052313 Ga0070698_1000523135 278
24 3300005518 Ga0070699_100059562 Ga0070699_1000595622 278
25 3300005545 Ga0070695_100075015 Ga0070695_1000750152 278
26 3300005548 Ga0070665_100000402 Ga0070665_10000040228 278
27 3300005548 Ga0070665_100000729 Ga0070665_10000072911 278
28 3300005549 Ga0070704_100013647 Ga0070704_1000136473 278
29 3300006844 Ga0075428_100214957 Ga0075428_1002149571 278
30 3300009148 Ga0105243_10010293 Ga0105243_100102933 278
31 3300025935 Ga0207709_10007116 Ga0207709_100071165 278
32 3300028379 Ga0268266_10000210 Ga0268266_1000021030 278
33 3300028379 Ga0268266_10000405 Ga0268266_1000040532 278
34 3300031733 Ga0316577_10155440 Ga0316577_101554402 278
35 3300032005 Ga0307411_10405491 Ga0307411_104054912 278
36 3300032126 Ga0307415_100004756 Ga0307415_1000047565 278
37 3300032133 Ga0316583_10056976 Ga0316583_100569762 278
38 3300033180 Ga0307510_10053991 Ga0307510_100539914 278
39 3300037466 Ga0395898_0001504 Ga0395898_0001504_29646_30536 278
40 3300038443 Ga0395901_0010682 Ga0395901_0010682_6736_7626 278
41 3300039437 Ga0436365_1390931 Ga0436365_1390931_475_1314 278
42 3300044901 Ga0466960_0002105 Ga0466960_0002105_2707_3546 278
43 3300045976 Ga0466967_0086513 Ga0466967_0086513_1746_2594 278
44 3300046660 Ga0495625_0000074 Ga0495625_0000074_90524_91363 278
45 3300048929 Ga0496126_0000425 Ga0496126_0000425_34485_35339 278
46 3300049590 Ga0501074_0012400 Ga0501074_0012400_4381_5232 278
47 3300053093 Ga0500651_0000004 Ga0500651_0000004_253667_254503 278
48 3300053103 Ga0500555_004889 Ga0500555_004889_381_1223 278
49 3300053104 Ga0500556_0001006 Ga0500556_0001006_11521_12366 278
50 3300053153 Ga0500616_0019120 Ga0500616_0019120_174_1016 278
51 3300053153 Ga0500616_0020729 Ga0500616_0020729_1575_2420 278
52 3300053730 Ga0500645_000454 Ga0500645_000454_6441_7283 278
53 3300055283 Ga0500661_004970 Ga0500661_004970_1376_2215 278
54 iso_pu_bacteria 2643221676 2644426363 278
55 3300003316 rootH1_10080152 rootH1_100801523 279
56 3300003322 rootL2_10218178 rootL2_1021817810 279
57 3300005340 Ga0070689_100423808 Ga0070689_1004238082 279
58 3300005354 Ga0070675_100022573 Ga0070675_1000225733 279
59 3300005544 Ga0070686_100418813 Ga0070686_1004188131 279
60 3300005544 Ga0070686_100492850 Ga0070686_1004928501 279
61 3300005548 Ga0070665_100166967 Ga0070665_1001669672 279
62 3300005549 Ga0070704_100243482 Ga0070704_1002434821 279
63 3300005577 Ga0068857_100383916 Ga0068857_1003839162 279
64 3300005617 Ga0068859_100122327 Ga0068859_1001223271 279
65 3300005937 Ga0081455_10233565 Ga0081455_102335651 279
66 3300006195 Ga0075366_10038524 Ga0075366_100385243 279
67 3300006846 Ga0075430_100026744 Ga0075430_1000267442 279
68 3300006852 Ga0075433_10107524 Ga0075433_101075242 279
69 3300006931 Ga0097620_100122336 Ga0097620_1001223361 279
70 3300009098 Ga0105245_10383755 Ga0105245_103837552 279
71 3300009147 Ga0114129_11016999 Ga0114129_110169991 279
72 3300009177 Ga0105248_10055364 Ga0105248_100553643 279
73 3300009177 Ga0105248_10130701 Ga0105248_101307012 279
74 3300009553 Ga0105249_10286519 Ga0105249_102865191 279
75 3300013296 Ga0157374_10001916 Ga0157374_100019163 279
76 3300013308 Ga0157375_10094762 Ga0157375_100947622 279
77 3300014325 Ga0163163_10839498 Ga0163163_108394981 279
78 3300014326 Ga0157380_10505880 Ga0157380_105058802 279
79 3300014745 Ga0157377_10053559 Ga0157377_100535591 279
80 3300025913 Ga0207695_10512637 Ga0207695_105126372 279
81 3300025926 Ga0207659_10041800 Ga0207659_100418003 279
82 3300025929 Ga0207664_10359870 Ga0207664_103598702 279
83 3300025986 Ga0207658_10481309 Ga0207658_104813091 279
84 3300026088 Ga0207641_10574369 Ga0207641_105743691 279
85 3300026095 Ga0207676_10413336 Ga0207676_104133362 279
86 3300026116 Ga0207674_10050543 Ga0207674_100505434 279
87 3300028379 Ga0268266_10046286 Ga0268266_100462863 279
88 3300031548 Ga0307408_100044783 Ga0307408_1000447834 279
89 3300031852 Ga0307410_10093166 Ga0307410_100931662 279
90 3300031852 Ga0307410_10118492 Ga0307410_101184922 279
91 3300031995 Ga0307409_100144160 Ga0307409_1001441602 279
92 3300032004 Ga0307414_10127517 Ga0307414_101275172 279
93 3300033180 Ga0307510_10030949 Ga0307510_100309492 279
94 3300035083 Ga0373926_0019741 Ga0373926_0019741_895_1740 279
95 3300035695 Ga0373927_0008922 Ga0373927_0008922_204_1049 279
96 3300036401 Ga0373937_0097730 Ga0373937_0097730_827_1717 279
97 3300037068 Ga0373925_0005976 Ga0373925_0005976_6157_7002 279
98 3300044683 Ga0466965_0006496 Ga0466965_0006496_2368_3300 279
99 3300044694 Ga0466963_0301584 Ga0466963_0301584_241_1083 279
100 3300045051 Ga0451576_0173207 Ga0451576_0173207_805_1671 279
101 3300046454 Ga0495592_0180171 Ga0495592_0180171_403_1254 279
102 3300046514 Ga0495618_0089104 Ga0495618_0089104_486_1337 279
103 3300046517 Ga0495630_0060848 Ga0495630_0060848_1824_2675 279
104 3300046517 Ga0495630_0135554 Ga0495630_0135554_720_1571 279
105 3300046522 Ga0495643_0000156 Ga0495643_0000156_8792_9637 279
106 3300046660 Ga0495625_0006448 Ga0495625_0006448_467_1309 279
107 3300047320 Ga0495672_0013716 Ga0495672_0013716_4508_5353 279
108 3300048907 Ga0496104_0245212 Ga0496104_0245212_298_1143 279
109 3300048908 Ga0496105_0036558 Ga0496105_0036558_1193_2038 279
110 3300049460 Ga0495682_0033753 Ga0495682_0033753_1005_1847 279
111 3300049581 Ga0501047_0095924 Ga0501047_0095924_1139_1987 279
112 3300050509 nmdc:mga0qj67_71839_c1 nmdc:mga0qj67_71839_c1_336_1181 279
113 3300053078 Ga0495612_0016035 Ga0495612_0016035_1641_2492 279
114 3300053085 Ga0495619_0006414 Ga0495619_0006414_2152_3081 279
115 3300053085 Ga0495619_0095990 Ga0495619_0095990_194_1039 279
116 3300053119 Ga0500595_000041 Ga0500595_000041_38805_39647 279
117 3300053139 Ga0500568_0011257 Ga0500568_0011257_2947_3792 279
118 3300055283 Ga0500661_004407 Ga0500661_004407_508_1512 279

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04909

Amidohydro_2

Amidohydrolase

58

323

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3irs-assembly1.cif.gz_B crystal structure of uncharacterized tim-barrel protein bb4693 from bordetella bronchiseptica 0.7392 2 277
4i6k-assembly1.cif.gz_A crystal structure of probable 2-pyrone-4,6-dicarboxylic acid hydrolase abaye1769 (target efi-505029) from acinetobacter baumannii with citric acid bound 0.7272 2 278
3irs-assembly1.cif.gz_B crystal structure of uncharacterized tim-barrel protein bb4693 from bordetella bronchiseptica 0.7271 2 277
3cjp-assembly1.cif.gz_B crystal structure of an uncharacterized amidohydrolase cac3332 from clostridium acetobutylicum 0.7227 1 278
4i6k-assembly1.cif.gz_A crystal structure of probable 2-pyrone-4,6-dicarboxylic acid hydrolase abaye1769 (target efi-505029) from acinetobacter baumannii with citric acid bound 0.7208 2 278
ID Description Score Start End Superfamily
af_I6Y3Q7_2_272_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8422 3 279 3.20.20.140
af_I6Y3Q7_2_272_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8337 3 279 3.20.20.140
af_Q50662_37_305_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8247 23 278 3.20.20.140
af_Q50662_37_305_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.7761 23 278 3.20.20.140
3k4wC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.758 2 277 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A524J035-F1-model_v4 Amidohydrolase 0.9891 138 279 GO:0016787
AF-A0A7X0STV1-F1-model_v4 Amidohydrolase family protein 0.9844 187 278 GO:0016787
AF-A0A382YI50-F1-model_v4 Amidohydrolase-related domain-containing protein 0.984 97 233 GO:0005737
GO:0016787
GO:0016831
GO:0019748
AF-A0A524IXK0-F1-model_v4 Amidohydrolase 0.9829 94 279 GO:0016787
GO:0016831
AF-A0A524J035-F1-model_v4 Amidohydrolase 0.9823 138 279 GO:0016787

Feature Viewer

pLDDT pTM Quality
95.74 0.93 High
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Predicted Structure (AlphaFold2)

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