F098861

General Info

Members Datasets Scaffolds Average Seq Length
118 103 236 436

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0053589|Ga0496108_0053589_1810_3213
Length 467
Sequence MSSLAPFAIEYCVTRMMASRHQAPERPLIESGLFAVPSVSGDEMYSWVRDLFPVPRSLTGPGVRATLSYLGQLLPGLILHEVPSGTRAFDWAVPEEWSIHDAWVEDERGSRVIDFNKNNLHVVGYSHPLDRWLDLDDLQPHLYSLPDQPNAIPYITSYYARRWGFCITHEQREKLKPGQYRAVIKAELKAGVLNYGELILQGENDQEIFLSTYICHPSLGNNELSGPAVTTALARLLMALPQRRYTYRIIFIPETIGSLVYLSKNLDHLTRHVIAGFNITCIGDERCYSYLPSRSGDTLSDRVALHVLKHLAPNFKRYTWLDRGSDERQYCAPGVDLPIATIMRSKYGEYPEYHTSLDDLSVVTPSGLEGGFNALRRAIQCIEENCYPRVTVLGEPQLGRRGLYPTVSSKAPAHNVRQMMDLLTYADGTRDLIEIAEITGVPMWELSTVAHKLEAHALLERFGIWQH

Samples

Sample ID Description Type Environment
1 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
8 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
19 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
24 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
25 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
26 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
27 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
28 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
29 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
35 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
36 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
37 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
38 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
39 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
40 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
41 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
42 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
43 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
44 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
45 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
46 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
47 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
48 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
49 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
50 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
51 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
52 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
53 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
54 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
55 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
57 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
58 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
59 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
60 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
61 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
62 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
63 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
64 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
65 3300049689 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_A_4_drought Metagenome Rhizosphere
66 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
67 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
68 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
69 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
70 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
71 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
73 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
74 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
75 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
76 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
77 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
78 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
79 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
80 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
81 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
82 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
83 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
84 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
85 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
86 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
87 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
88 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
89 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
90 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
91 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
92 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
93 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
94 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
95 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
96 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
97 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
98 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
99 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
100 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
101 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
102 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
103 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.44
Metatranscriptomes 0
Isolates 13.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.12
Nodule 5.93
Rhizoplane 3.39
Rhizosphere 56.78
Stem 0
Stem Tuber 0
Unclassified 11.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496108_0053589 3300048911 Bacteria 3383
2 JGI25151J46595_10000250 3300003187 Bacteria 62876
3 JGI25153J46596_10000012 3300003215 Bacteria 308056
4 JGI25153J46596_10000330 3300003215 Bacteria 34317
5 rootL2_10024274 3300003322 Bacteria 8644
6 rootH1_10208289 3300003323 Bacteria 2558
7 JGI25160J50197_1000320 3300003354 Bacteria 33351
8 JGI25160J50197_1001162 3300003354 Bacteria 13436
9 JGI25161J50226_1001508 3300003374 Bacteria 6894
10 Ga0055543_1001411 3300004625 Bacteria 9551
11 Ga0065165_1000019 3300005262 Bacteria 271815
12 Ga0065165_1008587 3300005262 Bacteria 4748
13 Ga0070675_100012827 3300005354 Bacteria 6575
14 Ga0070713_100068199 3300005436 Bacteria 2997
15 Ga0070707_100107910 3300005468 Bacteria 2701
16 Ga0070672_100056171 3300005543 Bacteria 3086
17 Ga0070665_100190765 3300005548 Unclassified 2050
18 Ga0068851_10018954 3300005834 Unclassified 3322
19 Ga0068862_100259722 3300005844 Unclassified 1585
20 Ga0081538_10018743 3300005981 Bacteria 5179
21 Ga0075362_10018486 3300006177 Unclassified 2885
22 Ga0075369_10034837 3300006186 Unclassified 2138
23 Ga0075428_100241109 3300006844 Bacteria 1950
24 Ga0105240_10004422 3300009093 Bacteria 21430
25 Ga0111539_10000331 3300009094 Bacteria 57983
26 Ga0207425_1002769 3300025245 Bacteria 5956
27 Ga0209129_1000261 3300025258 Bacteria 53485
28 Ga0209025_1000407 3300025294 Bacteria 87041
29 Ga0209025_1004823 3300025294 Bacteria 11398
30 Ga0209564_1008768 3300025295 Unclassified 4931
31 Ga0209758_1000059 3300025297 Bacteria 328458
32 Ga0209758_1000336 3300025297 Bacteria 87439
33 Ga0209256_1001201 3300025299 Bacteria 29018
34 Ga0207426_1000063 3300025302 Bacteria 358920
35 Ga0207426_1000904 3300025302 Bacteria 29822
36 Ga0207695_10019490 3300025913 Bacteria 7811
37 Ga0207695_10146426 3300025913 Bacteria 2306
38 Ga0207694_10063114 3300025924 Unclassified 2885
39 Ga0207700_10225197 3300025928 Unclassified 1592
40 Ga0209371_1005400 3300027312 Bacteria 5094
41 Ga0207428_10000242 3300027907 Bacteria 74839
42 Ga0207428_10087840 3300027907 Unclassified 2418
43 Ga0268256_1003717 3300030500 Bacteria 6716
44 Ga0316180_1131895 3300030736 Bacteria 2073
45 Ga0265316_10007808 3300031344 Bacteria 10015
46 Ga0265316_10049453 3300031344 Unclassified 3312
47 Ga0265313_10016540 3300031595 Unclassified 4237
48 Ga0265314_10002811 3300031711 Bacteria 17377
49 Ga0307416_100035490 3300032002 Bacteria 3809
50 Ga0395900_0004834 3300037418 Bacteria 14191
51 Ga0451577_0005185 3300042876 Bacteria 13407
52 Ga0466965_0025415 3300044683 Bacteria 2866
53 Ga0453684_0003388 3300044712 Bacteria 36051
54 Ga0453684_0035250 3300044712 Bacteria 6921
55 Ga0466971_0015274 3300044719 Bacteria 3379
56 Ga0466970_0042263 3300044765 Bacteria 2424
57 Ga0466960_0023394 3300044901 Bacteria 2774
58 Ga0466958_0072035 3300045836 Bacteria 2116
59 Ga0495635_0050167 3300046663 Bacteria 2877
60 Ga0495672_0001827 3300047320 Bacteria 20370
61 Ga0496104_0000829 3300048907 Bacteria 26651
62 Ga0496109_0028321 3300048912 Bacteria 5009
63 Ga0496112_0035277 3300048915 Bacteria 4871
64 Ga0496125_0000432 3300048928 Bacteria 77024
65 Ga0496125_0001471 3300048928 Bacteria 34092
66 Ga0496125_0070812 3300048928 Bacteria 2728
67 Ga0501040_0005066 3300049576 Bacteria 8516
68 Ga0501070_0063056 3300049586 Bacteria 3070
69 Ga0501071_0072774 3300049587 Unclassified 2507
70 Ga0501071_0286017 3300049587 Bacteria 1248
71 Ga0501198_002173 3300049649 Bacteria 2621
72 Ga0501223_013163 3300049663 Bacteria 1648
73 Ga0501224_003281 3300049664 Bacteria 2251
74 Ga0501227_003418 3300049665 Bacteria 3441
75 Ga0501233_003248 3300049668 Bacteria 2918
76 Ga0501235_000104 3300049669 Bacteria 13528
77 Ga0501259_002151 3300049688 Bacteria 3232
78 Ga0501260_001412 3300049689 Bacteria 1976
79 Ga0501261_000926 3300049690 Bacteria 3627
80 Ga0501225_0007333 3300049705 Bacteria 3196
81 Ga0501080_0015990 3300049742 Bacteria 6923
82 Ga0501083_0003626 3300049744 Bacteria 10837
83 Ga0501266_002069 3300049763 Bacteria 2527
84 Ga0501035_0173782 3300049822 Bacteria 1860
85 Ga0501212_000972 3300049851 Bacteria 3059
86 nmdc:mga0k408_39319_c1 3300050493 Unclassified 2717
87 nmdc:mga05p37_38910_c1 3300050507 Bacteria 4605
88 nmdc:mga08y16_25227_c1 3300050511 Bacteria 6268
89 nmdc:mga08y16_35_c1 3300050511 Bacteria 157578
90 nmdc:mga0sz30_775_c1 3300050516 Bacteria 11645
91 Ga0495619_0049177 3300053085 Bacteria 2780
92 Ga0500643_000368 3300053087 Bacteria 35607
93 Ga0500641_0002536 3300053096 Bacteria 6446
94 Ga0500641_0024641 3300053096 Unclassified 2321
95 Ga0500595_006599 3300053119 Bacteria 4901
96 Ga0500658_0005387 3300053134 Bacteria 4758
97 Ga0500568_0007381 3300053139 Bacteria 5397
98 Ga0500588_0039620 3300053146 Bacteria 1411
99 Ga0500604_0000834 3300053151 Bacteria 8515
100 Ga0500616_0002184 3300053153 Bacteria 16870
101 Ga0501082_0003998 3300060353 Bacteria 12869
102 Ga0530510_0108587 3300061734 Bacteria 2031
103 2585265082 2582581306 Bacteria 6450535
104 2585385793 2582581865 Bacteria 6644329
105 2585539726 2585427528 Bacteria 6842387
106 2585837684 2585427593 Bacteria 7141551
107 2787506207 2786546548 Bacteria 4745694
108 2806067096 2802429636 Bacteria 7597525
109 2841855330 2841851746 Bacteria 7532261
110 2842233195 2842229732 Bacteria 7475766
111 2874148002 2874146452 Bacteria 7533118
112 2876414990 2876413966 Bacteria 6831344
113 2898911008 2898907183 Bacteria 4067722
114 2919494840 2919493220 Bacteria 4598500
115 2919547143 2919543075 Bacteria 4728703
116 3007872375 3007872151 Bacteria 5268868
117 8005576963 8005570704 Bacteria 6957481
118 8019656128 8019648815 Bacteria 10014479
119 Ga0496108_0053589
120 JGI25151J46595_10000250
121 JGI25153J46596_10000012
122 JGI25153J46596_10000330
123 rootL2_10024274
124 rootH1_10208289
125 JGI25160J50197_1000320
126 JGI25160J50197_1001162
127 JGI25161J50226_1001508
128 Ga0055543_1001411
129 Ga0065165_1000019
130 Ga0065165_1008587
131 Ga0070675_100012827
132 Ga0070713_100068199
133 Ga0070707_100107910
134 Ga0070672_100056171
135 Ga0070665_100190765
136 Ga0068851_10018954
137 Ga0068862_100259722
138 Ga0081538_10018743
139 Ga0075362_10018486
140 Ga0075369_10034837
141 Ga0075428_100241109
142 Ga0105240_10004422
143 Ga0111539_10000331
144 Ga0207425_1002769
145 Ga0209129_1000261
146 Ga0209025_1000407
147 Ga0209025_1004823
148 Ga0209564_1008768
149 Ga0209758_1000059
150 Ga0209758_1000336
151 Ga0209256_1001201
152 Ga0207426_1000063
153 Ga0207426_1000904
154 Ga0207695_10019490
155 Ga0207695_10146426
156 Ga0207694_10063114
157 Ga0207700_10225197
158 Ga0209371_1005400
159 Ga0207428_10000242
160 Ga0207428_10087840
161 Ga0268256_1003717
162 Ga0316180_1131895
163 Ga0265316_10007808
164 Ga0265316_10049453
165 Ga0265313_10016540
166 Ga0265314_10002811
167 Ga0307416_100035490
168 Ga0395900_0004834
169 Ga0451577_0005185
170 Ga0466965_0025415
171 Ga0453684_0003388
172 Ga0453684_0035250
173 Ga0466971_0015274
174 Ga0466970_0042263
175 Ga0466960_0023394
176 Ga0466958_0072035
177 Ga0495635_0050167
178 Ga0495672_0001827
179 Ga0496104_0000829
180 Ga0496109_0028321
181 Ga0496112_0035277
182 Ga0496125_0000432
183 Ga0496125_0001471
184 Ga0496125_0070812
185 Ga0501040_0005066
186 Ga0501070_0063056
187 Ga0501071_0072774
188 Ga0501071_0286017
189 Ga0501198_002173
190 Ga0501223_013163
191 Ga0501224_003281
192 Ga0501227_003418
193 Ga0501233_003248
194 Ga0501235_000104
195 Ga0501259_002151
196 Ga0501260_001412
197 Ga0501261_000926
198 Ga0501225_0007333
199 Ga0501080_0015990
200 Ga0501083_0003626
201 Ga0501266_002069
202 Ga0501035_0173782
203 Ga0501212_000972
204 nmdc:mga0k408_39319_c1
205 nmdc:mga05p37_38910_c1
206 nmdc:mga08y16_25227_c1
207 nmdc:mga08y16_35_c1
208 nmdc:mga0sz30_775_c1
209 Ga0495619_0049177
210 Ga0500643_000368
211 Ga0500641_0002536
212 Ga0500641_0024641
213 Ga0500595_006599
214 Ga0500658_0005387
215 Ga0500568_0007381
216 Ga0500588_0039620
217 Ga0500604_0000834
218 Ga0500616_0002184
219 Ga0501082_0003998
220 Ga0530510_0108587
221 2585265082
222 2585385793
223 2585539726
224 2585837684
225 2787506207
226 2806067096
227 2841855330
228 2842233195
229 2874148002
230 2876414990
231 2898911008
232 2919494840
233 2919547143
234 3007872375
235 8005576963
236 8019656128

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09940

DUF2172

Domain of unknown function (DUF2172)

96

187

0.99

PF16254

DUF4910

Domain of unknown function (DUF4910)

45

385

0.99

PF16221

HTH_47

winged helix-turn-helix

385

461

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3k9t-assembly1.cif.gz_A crystal structure of putative peptidase (np_348812.1) from clostridium acetobutylicum at 2.37 a resolution 0.9703 4 431
3k9t-assembly1.cif.gz_A crystal structure of putative peptidase (np_348812.1) from clostridium acetobutylicum at 2.37 a resolution 0.9478 4 431
6zeq-assembly1.cif.gz_A aspergillus oryzae leucine aminopeptidase a mature enzyme 0.7681 163 351
8fw5-assembly1.cif.gz_B chimeric hsgator1-spgtr-splam complex 0.7643 352 434
4isd-assembly1.cif.gz_D crystal structure of glutathione transferase homolog from burkholderia gl bgr1, target efi-501803, with bound glutathione 0.7521 255 288
ID Description Score Start End Superfamily
3k9tA02 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Domain of unknown function DUF2172 0.9817 63 158 3.50.30.90
3k9tA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9718 4 352 3.40.630.10
3k9tA02 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Domain of unknown function DUF2172 0.9616 63 158 3.50.30.90
3k9tA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9303 4 352 3.40.630.10
3k9tA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8635 355 429 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A382RD69-F1-model_v4 DUF4910 domain-containing protein 0.9927 9 241
AF-A0A0B2JXG1-F1-model_v4 Aminopeptidase 0.9903 9 304 GO:0004177
AF-A0A382RC66-F1-model_v4 DUF4910 domain-containing protein 0.9897 8 208
AF-A0A7U6FV13-F1-model_v4 deleted 0.9889 10 229
AF-A0A7X7A2Z8-F1-model_v4 DUF2172 domain-containing protein 0.9881 8 175

Map