F098461

General Info

Members Datasets Scaffolds Average Seq Length
118 38 118 509

Family's Representative Sequence

Representative Sequence 3300044673|Ga0453683_0022363|Ga0453683_0022363_1931_3442
Length 503
Sequence MTIVLDGSSLTIEKLVAIARHGEQVELAPAALERIKVCRAMLEDKLAKKEIMYGTNTGIGEFSEHLLSDEEVREFQRYLVYNHAAGIGDPAPVEYVRGALAGRINVHAHGNSGCRPEITLTLVEMLNKGVTPVVCQKGSVGACGDLAPMAQAALLLLGEGEAWLGGERLPGKEAMARAGISIPGLHARDGLAAINGSNLLTAMSAIHIYDMERFIKQAEIAAAMSIEALLGNLKPYNAKLHELRGFKGAIQSAENLRKLVAGSDLTTGKMKTKVQDAYSMRSTPQVIGAVAYAHSQVEIELNGVGDNPIFVPEENLTLTGANFQGSPVSLPMDMAGVAITMVCVLSERRLNRLTNPALSVGLPDFLAHNPGFYSGLMLSQYTADHLIVEQRILSAPASIQSIPAAADQEDFVSMGMNTAIKNGQILDNAFGVLGIEFMAAAQALDFREFQPGKGTQCAREVIRKHVEHLHVDRPLYNDHNTMKALVKSGEILEEVEKVVGELG

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
4 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
5 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
6 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
7 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
8 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
9 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
10 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
11 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
12 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
13 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
14 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
15 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
16 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
17 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
18 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
19 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
20 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
21 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
22 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
23 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
24 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
25 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
26 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
27 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
28 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
29 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
30 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
31 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
32 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
33 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
34 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
35 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
36 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
37 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
38 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.15
Stem 0
Stem Tuber 0
Unclassified 0.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100019883 3300005471 Bacteria 7043
2 Ga0081539_10008711 3300005985 Bacteria 8722
3 Ga0081539_10033712 3300005985 Bacteria 3112
4 Ga0075429_100008149 3300006880 Bacteria 9110
5 Ga0075429_100016656 3300006880 Bacteria 6365
6 Ga0114129_10060099 3300009147 Bacteria 5314
7 Ga0114129_10064165 3300009147 Bacteria 5125
8 Ga0114129_10079621 3300009147 Bacteria 4555
9 Ga0105246_10038734 3300011119 Bacteria 3207
10 Ga0265319_1018280 3300028563 Bacteria 2643
11 Ga0265318_10004060 3300028577 Bacteria 7182
12 Ga0265318_10015361 3300028577 Bacteria 3188
13 Ga0265318_10027996 3300028577 Unclassified 2209
14 Ga0265324_10009683 3300029957 Bacteria 3750
15 Ga0265320_10002966 3300031240 Bacteria 11599
16 Ga0265320_10019073 3300031240 Bacteria 3759
17 Ga0265325_10008330 3300031241 Bacteria 6123
18 Ga0265329_10005064 3300031242 Bacteria 5380
19 Ga0265340_10019960 3300031247 Bacteria 3448
20 Ga0265339_10021522 3300031249 Bacteria 3750
21 Ga0265339_10026041 3300031249 Bacteria 3353
22 Ga0265331_10021821 3300031250 Bacteria 3272
23 Ga0265327_10000370 3300031251 Bacteria 84921
24 Ga0265316_10002845 3300031344 Bacteria 17709
25 Ga0265316_10008472 3300031344 Bacteria 9536
26 Ga0265316_10017546 3300031344 Bacteria 6181
27 Ga0265316_10036532 3300031344 Bacteria 3972
28 Ga0265313_10032729 3300031595 Bacteria 2650
29 Ga0316579_10001193 3300031691 Bacteria 9298
30 Ga0316579_10001638 3300031691 Bacteria 8216
31 Ga0265314_10038475 3300031711 Bacteria 3455
32 Ga0265314_10046978 3300031711 Bacteria 3042
33 Ga0265342_10102553 3300031712 Unclassified 1628
34 Ga0316576_10003698 3300031727 Bacteria 9028
35 Ga0316576_10017622 3300031727 Bacteria 4857
36 Ga0316576_10026908 3300031727 Bacteria 4040
37 Ga0316576_10038901 3300031727 Unclassified 3413
38 Ga0316576_10078671 3300031727 Bacteria 2444
39 Ga0316576_10090991 3300031727 Bacteria 2273
40 Ga0316578_10000021 3300031728 Bacteria 31275
41 Ga0316578_10020536 3300031728 Bacteria 3652
42 Ga0316578_10048569 3300031728 Bacteria 2478
43 Ga0316577_10004548 3300031733 Bacteria 7175
44 Ga0316577_10011153 3300031733 Bacteria 4863
45 Ga0316577_10014771 3300031733 Bacteria 4291
46 Ga0316577_10014895 3300031733 Bacteria 4275
47 Ga0316577_10051233 3300031733 Bacteria 2303
48 Ga0316577_10057993 3300031733 Bacteria 2162
49 Ga0316577_10064474 3300031733 Bacteria 2045
50 Ga0316583_10001076 3300032133 Bacteria 8866
51 Ga0316583_10015939 3300032133 Bacteria 2707
52 Ga0316574_0003005 3300035398 Bacteria 8597
53 Ga0316574_0013391 3300035398 Archaea 4714
54 Ga0316574_0045001 3300035398 Bacteria 2732
55 Ga0316574_0102921 3300035398 Bacteria 1828
56 Ga0316574_0145402 3300035398 Bacteria 1528
57 Ga0316582_0001575 3300036647 Bacteria 10154
58 Ga0316582_0010331 3300036647 Bacteria 5108
59 Ga0316582_0016625 3300036647 Bacteria 4235
60 Ga0316582_0098096 3300036647 Bacteria 1937
61 Ga0316582_0109818 3300036647 Bacteria 1834
62 Ga0316584_0000589 3300036712 Bacteria 19657
63 Ga0316584_0000603 3300036712 Bacteria 19507
64 Ga0316584_0017029 3300036712 Bacteria 5218
65 Ga0316584_0026399 3300036712 Bacteria 4270
66 Ga0316584_0042912 3300036712 Bacteria 3372
67 Ga0316584_0054835 3300036712 Bacteria 2984
68 Ga0316584_0056478 3300036712 Bacteria 2939
69 Ga0316584_0143994 3300036712 Bacteria 1776
70 Ga0316581_0002014 3300037588 Bacteria 4764
71 Ga0395901_0059284 3300038443 Bacteria 3982
72 Ga0400490_22699 3300038726 Bacteria 3286
73 Ga0451577_0001287 3300042876 Bacteria 34501
74 Ga0451577_0001314 3300042876 Bacteria 33976
75 Ga0451577_0011148 3300042876 Bacteria 8527
76 Ga0451577_0018268 3300042876 Bacteria 6462
77 Ga0451577_0020020 3300042876 Bacteria 6145
78 Ga0451577_0023427 3300042876 Bacteria 5631
79 Ga0451577_0028387 3300042876 Bacteria 5060
80 Ga0451577_0032194 3300042876 Bacteria 4725
81 Ga0453683_0000751 3300044673 Bacteria 32744
82 Ga0453683_0011573 3300044673 Bacteria 5812
83 Ga0453683_0022363 3300044673 Bacteria 4034
84 Ga0453683_0027047 3300044673 Unclassified 3641
85 Ga0453683_0028191 3300044673 Unclassified 3556
86 Ga0453684_0000012 3300044712 Bacteria 1062512
87 Ga0453684_0000441 3300044712 Bacteria 169068
88 Ga0453684_0001339 3300044712 Bacteria 72274
89 Ga0453684_0003187 3300044712 Bacteria 37593
90 Ga0453684_0003273 3300044712 Bacteria 36992
91 Ga0453684_0003603 3300044712 Bacteria 34550
92 Ga0453684_0004470 3300044712 Bacteria 29452
93 Ga0453684_0012460 3300044712 Bacteria 14013
94 Ga0453684_0015484 3300044712 Bacteria 12051
95 Ga0453684_0015973 3300044712 Bacteria 11800
96 Ga0453684_0021585 3300044712 Bacteria 9607
97 Ga0453684_0023598 3300044712 Bacteria 9045
98 Ga0453684_0029192 3300044712 Bacteria 7843
99 Ga0453684_0033976 3300044712 Bacteria 7092
100 Ga0453684_0038388 3300044712 Bacteria 6548
101 Ga0453684_0050875 3300044712 Bacteria 5441
102 Ga0453684_0053575 3300044712 Bacteria 5265
103 Ga0453684_0067456 3300044712 Bacteria 4549
104 Ga0453684_0148842 3300044712 Bacteria 2785
105 Ga0453684_0213367 3300044712 Unclassified 2242
106 Ga0453684_0267359 3300044712 Bacteria 1956
107 Ga0453684_0397579 3300044712 Bacteria 1544
108 Ga0451576_0000115 3300045051 Bacteria 208342
109 Ga0451576_0006862 3300045051 Bacteria 13804
110 Ga0451576_0028348 3300045051 Bacteria 5999
111 Ga0451576_0078375 3300045051 Unclassified 3439
112 Ga0451576_0115521 3300045051 Bacteria 2794
113 Ga0451576_0132231 3300045051 Bacteria 2601
114 Ga0501081_0019016 3300049743 Bacteria 4569
115 nmdc:mga05p37_46947_c1 3300050507 Bacteria 5311
116 nmdc:mga05p37_94582_c1 3300050507 Bacteria 3682
117 nmdc:mga09592_4623_c1 3300050508 Bacteria 11149
118 Ga0530510_0062801 3300061734 Bacteria 2689

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0397579 Ga0453684_0397579_241_1530 429
2 3300035398 Ga0316574_0145402 Ga0316574_0145402_10_1380 456
3 3300036647 Ga0316582_0016625 Ga0316582_0016625_2814_4217 467
4 3300044673 Ga0453683_0022363 Ga0453683_0022363_1931_3442 503
5 3300038443 Ga0395901_0059284 Ga0395901_0059284_174_1691 505
6 3300044712 Ga0453684_0003603 Ga0453684_0003603_909_2441 505
7 3300044712 Ga0453684_0038388 Ga0453684_0038388_2557_4089 505
8 3300035398 Ga0316574_0013391 Ga0316574_0013391_2324_3844 506
9 3300005985 Ga0081539_10008711 Ga0081539_100087116 507
10 3300005985 Ga0081539_10033712 Ga0081539_100337122 507
11 3300006880 Ga0075429_100008149 Ga0075429_1000081495 507
12 3300006880 Ga0075429_100016656 Ga0075429_1000166562 507
13 3300009147 Ga0114129_10060099 Ga0114129_100600994 507
14 3300009147 Ga0114129_10064165 Ga0114129_100641652 507
15 3300009147 Ga0114129_10079621 Ga0114129_100796212 507
16 3300011119 Ga0105246_10038734 Ga0105246_100387342 507
17 3300028563 Ga0265319_1018280 Ga0265319_10182801 507
18 3300028577 Ga0265318_10004060 Ga0265318_100040603 507
19 3300028577 Ga0265318_10015361 Ga0265318_100153612 507
20 3300028577 Ga0265318_10027996 Ga0265318_100279961 507
21 3300029957 Ga0265324_10009683 Ga0265324_100096831 507
22 3300031240 Ga0265320_10002966 Ga0265320_100029668 507
23 3300031240 Ga0265320_10019073 Ga0265320_100190732 507
24 3300031241 Ga0265325_10008330 Ga0265325_100083307 507
25 3300031242 Ga0265329_10005064 Ga0265329_100050642 507
26 3300031247 Ga0265340_10019960 Ga0265340_100199602 507
27 3300031249 Ga0265339_10021522 Ga0265339_100215222 507
28 3300031249 Ga0265339_10026041 Ga0265339_100260413 507
29 3300031250 Ga0265331_10021821 Ga0265331_100218213 507
30 3300031251 Ga0265327_10000370 Ga0265327_1000037089 507
31 3300031344 Ga0265316_10002845 Ga0265316_100028459 507
32 3300031344 Ga0265316_10008472 Ga0265316_100084722 507
33 3300031344 Ga0265316_10017546 Ga0265316_100175464 507
34 3300031344 Ga0265316_10036532 Ga0265316_100365323 507
35 3300031595 Ga0265313_10032729 Ga0265313_100327293 507
36 3300031691 Ga0316579_10001193 Ga0316579_100011937 507
37 3300031691 Ga0316579_10001638 Ga0316579_100016383 507
38 3300031711 Ga0265314_10038475 Ga0265314_100384753 507
39 3300031711 Ga0265314_10046978 Ga0265314_100469782 507
40 3300031712 Ga0265342_10102553 Ga0265342_101025531 507
41 3300031727 Ga0316576_10003698 Ga0316576_100036981 507
42 3300031727 Ga0316576_10017622 Ga0316576_100176222 507
43 3300031727 Ga0316576_10026908 Ga0316576_100269081 507
44 3300031727 Ga0316576_10078671 Ga0316576_100786711 507
45 3300031727 Ga0316576_10090991 Ga0316576_100909912 507
46 3300031728 Ga0316578_10000021 Ga0316578_1000002135 507
47 3300031728 Ga0316578_10020536 Ga0316578_100205362 507
48 3300031728 Ga0316578_10048569 Ga0316578_100485692 507
49 3300031733 Ga0316577_10004548 Ga0316577_100045483 507
50 3300031733 Ga0316577_10011153 Ga0316577_100111531 507
51 3300031733 Ga0316577_10014771 Ga0316577_100147713 507
52 3300031733 Ga0316577_10014895 Ga0316577_100148952 507
53 3300031733 Ga0316577_10051233 Ga0316577_100512332 507
54 3300031733 Ga0316577_10057993 Ga0316577_100579932 507
55 3300031733 Ga0316577_10064474 Ga0316577_100644741 507
56 3300032133 Ga0316583_10001076 Ga0316583_100010762 507
57 3300032133 Ga0316583_10015939 Ga0316583_100159393 507
58 3300035398 Ga0316574_0003005 Ga0316574_0003005_2627_4150 507
59 3300035398 Ga0316574_0045001 Ga0316574_0045001_1021_2595 507
60 3300035398 Ga0316574_0102921 Ga0316574_0102921_25_1548 507
61 3300036647 Ga0316582_0001575 Ga0316582_0001575_6980_8503 507
62 3300036647 Ga0316582_0010331 Ga0316582_0010331_290_1876 507
63 3300036647 Ga0316582_0098096 Ga0316582_0098096_170_1693 507
64 3300036647 Ga0316582_0109818 Ga0316582_0109818_263_1786 507
65 3300036712 Ga0316584_0000589 Ga0316584_0000589_16126_17712 507
66 3300036712 Ga0316584_0000603 Ga0316584_0000603_13131_14654 507
67 3300036712 Ga0316584_0017029 Ga0316584_0017029_2632_4167 507
68 3300036712 Ga0316584_0026399 Ga0316584_0026399_639_2162 507
69 3300036712 Ga0316584_0042912 Ga0316584_0042912_1227_2756 507
70 3300036712 Ga0316584_0054835 Ga0316584_0054835_436_1959 507
71 3300036712 Ga0316584_0056478 Ga0316584_0056478_1267_2790 507
72 3300036712 Ga0316584_0143994 Ga0316584_0143994_191_1714 507
73 3300037588 Ga0316581_0002014 Ga0316581_0002014_354_1877 507
74 3300038726 Ga0400490_22699 Ga0400490_22699_190_1713 507
75 3300042876 Ga0451577_0001287 Ga0451577_0001287_11320_12843 507
76 3300042876 Ga0451577_0001314 Ga0451577_0001314_22645_24168 507
77 3300042876 Ga0451577_0011148 Ga0451577_0011148_5991_7514 507
78 3300042876 Ga0451577_0018268 Ga0451577_0018268_3690_5213 507
79 3300042876 Ga0451577_0020020 Ga0451577_0020020_4098_5621 507
80 3300042876 Ga0451577_0023427 Ga0451577_0023427_3131_4654 507
81 3300042876 Ga0451577_0028387 Ga0451577_0028387_1950_3473 507
82 3300042876 Ga0451577_0032194 Ga0451577_0032194_2633_4162 507
83 3300044673 Ga0453683_0000751 Ga0453683_0000751_22837_24360 507
84 3300044673 Ga0453683_0011573 Ga0453683_0011573_1277_2800 507
85 3300044673 Ga0453683_0027047 Ga0453683_0027047_1947_3488 507
86 3300044673 Ga0453683_0028191 Ga0453683_0028191_1092_2615 507
87 3300044712 Ga0453684_0000012 Ga0453684_0000012_743551_745074 507
88 3300044712 Ga0453684_0000441 Ga0453684_0000441_123826_125355 507
89 3300044712 Ga0453684_0001339 Ga0453684_0001339_57944_59467 507
90 3300044712 Ga0453684_0003187 Ga0453684_0003187_4922_6445 507
91 3300044712 Ga0453684_0003273 Ga0453684_0003273_15998_17521 507
92 3300044712 Ga0453684_0004470 Ga0453684_0004470_21995_23527 507
93 3300044712 Ga0453684_0012460 Ga0453684_0012460_931_2454 507
94 3300044712 Ga0453684_0015484 Ga0453684_0015484_2016_3539 507
95 3300044712 Ga0453684_0015973 Ga0453684_0015973_5906_7429 507
96 3300044712 Ga0453684_0021585 Ga0453684_0021585_6020_7543 507
97 3300044712 Ga0453684_0023598 Ga0453684_0023598_3352_4875 507
98 3300044712 Ga0453684_0029192 Ga0453684_0029192_1025_2548 507
99 3300044712 Ga0453684_0033976 Ga0453684_0033976_2085_3608 507
100 3300044712 Ga0453684_0050875 Ga0453684_0050875_2248_3771 507
101 3300044712 Ga0453684_0053575 Ga0453684_0053575_2873_4396 507
102 3300044712 Ga0453684_0067456 Ga0453684_0067456_2545_4083 507
103 3300044712 Ga0453684_0148842 Ga0453684_0148842_927_2450 507
104 3300044712 Ga0453684_0213367 Ga0453684_0213367_272_1795 507
105 3300044712 Ga0453684_0267359 Ga0453684_0267359_55_1578 507
106 3300045051 Ga0451576_0000115 Ga0451576_0000115_139176_140699 507
107 3300045051 Ga0451576_0006862 Ga0451576_0006862_12238_13761 507
108 3300045051 Ga0451576_0028348 Ga0451576_0028348_250_1773 507
109 3300045051 Ga0451576_0078375 Ga0451576_0078375_174_1697 507
110 3300045051 Ga0451576_0115521 Ga0451576_0115521_28_1551 507
111 3300045051 Ga0451576_0132231 Ga0451576_0132231_82_1605 507
112 3300049743 Ga0501081_0019016 Ga0501081_0019016_123_1646 507
113 3300050507 nmdc:mga05p37_46947_c1 nmdc:mga05p37_46947_c1_3347_4870 507
114 3300050507 nmdc:mga05p37_94582_c1 nmdc:mga05p37_94582_c1_22_1545 507
115 3300050508 nmdc:mga09592_4623_c1 nmdc:mga09592_4623_c1_4837_6360 507
116 3300061734 Ga0530510_0062801 Ga0530510_0062801_579_2207 507
117 3300005471 Ga0070698_100019883 Ga0070698_1000198834 513
118 3300031727 Ga0316576_10038901 Ga0316576_100389011 513

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00221

Lyase_aromatic

Aromatic amino acid lyase

10

464

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gkj-assembly1.cif.gz_A histidine ammonia-lyase (hal) mutant y280f from pseudomonas putida 0.9414 1 503
1b8f-assembly1.cif.gz_A histidine ammonia-lyase (hal) from pseudomonas putida 0.9413 1 503
1eb4-assembly1.cif.gz_A histidine ammonia-lyase (hal) mutant f329a from pseudomonas putida 0.9411 1 503
6v6h-assembly1.cif.gz_C crystal structure of histidine ammonia-lyase from trypanosoma cruzi 0.9359 1 507
6v6h-assembly1.cif.gz_A crystal structure of histidine ammonia-lyase from trypanosoma cruzi 0.9358 1 507
ID Description Score Start End Superfamily
1eb4A02 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9214 206 503 1.20.200.10
1b8fA01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9207 1 202 1.10.275.10
af_Q4E133_201_513_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9172 206 507 1.20.200.10
1b8fA01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9162 1 202 1.10.275.10
3unvB01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9096 3 202 1.10.275.10
ID Description Score Start End GO Terms
AF-A0A661ZGN5-F1-model_v4 Phenylalanine ammonia-lyase 0.9626 3 513 GO:0016841
AF-A0A381YNY4-F1-model_v4 Phenylalanine ammonia-lyase 0.962 1 513 GO:0016829
AF-A0A3B9YJP2-F1-model_v4 Phenylalanine ammonia-lyase 0.9605 81 513 GO:0016841
AF-A0A661ZGN5-F1-model_v4 Phenylalanine ammonia-lyase 0.9571 3 513 GO:0016841
AF-A0A661BA16-F1-model_v4 Phenylalanine ammonia-lyase 0.9521 1 406 GO:0016841

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pLDDT pTM Quality
86.92 0.91 High
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Predicted Structure (AlphaFold2)

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