F093335

General Info

Members Datasets Scaffolds Average Seq Length
117 88 234 460

Family's Representative Sequence

Representative Sequence 3300028556|Ga0265337_1002343|Ga0265337_10023434
Length 506
Sequence MVPRQLIRLGATASVGVVLAACGSSAPADVSTPTAGVSAIPAPAHTSSARLLDWPEFGLNPQRSGVSELSTGITAANVGHLARRTVKLAGTVDSSPIYLHGASVDGATHNTIVVTTTYGKTIAIDADSGRILWTFTPPGYSRWAGSSQITTTSPLADPNRRFVYAASPNGLIHKLSLASGSEAAGGSWPVPITRDPTHEKLAAALNIDGGDLLATTGGYYGDAPPYQGHVVAIDRASGRISKVFNTLCANRHEILAPSTCSASDSAILSRGGPVVEPRNGRILIDTGNGPWNGTTNFGDSALELTFPTLALRQSFTPTNQAQLNSGDTDLGSSAPALLGHDRIVLAGKDGILRVLALSRLDGHPPTGARTRVHPLGGEIQRLSIPGGGELFSAPAVWQRRGHTTMFVADEGGTAAYVLRAGRLYRAWENSTPGTSPVMAGGLLYVYDLSGGGINIYKPASPRPVAKLPGASGHWNSPIVVDSHVVEPEGNANDHQLSGTLDIFSAS

Samples

Sample ID Description Type Environment
1 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
4 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
17 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
21 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
22 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
33 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
34 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
37 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
38 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
41 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
42 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
43 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
44 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
45 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
46 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
47 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
48 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
49 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
50 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
51 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
52 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
53 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
54 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
55 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
56 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
57 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
58 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
59 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
60 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
61 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
62 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
63 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
64 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
65 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
66 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
67 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
68 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
69 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
70 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
71 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
72 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
73 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
74 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
77 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
78 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
79 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
80 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
81 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
82 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
83 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
84 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
85 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
86 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
87 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
88 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.15
Metatranscriptomes 0.85
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12.82
Rhizosphere 86.32
Stem 0
Stem Tuber 0
Unclassified 7.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265337_1002343 3300028556 Bacteria 8774
2 Ga0070683_100037492 3300005329 Bacteria 4438
3 Ga0070713_100070978 3300005436 Unclassified 2942
4 Ga0070701_10056034 3300005438 Bacteria 2061
5 Ga0070705_100017276 3300005440 Bacteria 3765
6 Ga0070706_100018813 3300005467 Bacteria 6369
7 Ga0070707_100034333 3300005468 Bacteria 4838
8 Ga0070698_100018767 3300005471 Bacteria 7280
9 Ga0070699_100030395 3300005518 Bacteria 4663
10 Ga0070696_100159368 3300005546 Unclassified 1662
11 Ga0068855_100026276 3300005563 Bacteria 6965
12 Ga0070664_100078241 3300005564 Bacteria 2845
13 Ga0070664_100140311 3300005564 Bacteria 2128
14 Ga0068856_100000644 3300005614 Bacteria 37832
15 Ga0081539_10004480 3300005985 Bacteria 15384
16 Ga0075433_10000289 3300006852 Bacteria 30082
17 Ga0075434_100000777 3300006871 Bacteria 25288
18 Ga0075435_100008811 3300007076 Bacteria 7266
19 Ga0075435_100085295 3300007076 Bacteria 2599
20 Ga0105240_10084422 3300009093 Bacteria 3894
21 Ga0105242_10208838 3300009176 Unclassified 1739
22 Ga0157371_10001930 3300013102 Bacteria 20700
23 Ga0157370_10037225 3300013104 Bacteria 4717
24 Ga0157369_10034975 3300013105 Bacteria 5509
25 Ga0157369_10059088 3300013105 Bacteria 4136
26 Ga0157372_10118395 3300013307 Bacteria 3039
27 Ga0206356_10747886 3300020070 Unclassified 1862
28 Ga0207699_10049670 3300025906 Bacteria 2470
29 Ga0207684_10145683 3300025910 Bacteria 2037
30 Ga0207695_10064275 3300025913 Bacteria 3779
31 Ga0207693_10077331 3300025915 Bacteria 2606
32 Ga0207646_10022063 3300025922 Bacteria 5873
33 Ga0207664_10050126 3300025929 Bacteria 3291
34 Ga0207664_10088239 3300025929 Bacteria 2537
35 Ga0207702_10000554 3300026078 Bacteria 41627
36 Ga0265319_1000965 3300028563 Bacteria 18066
37 Ga0265319_1003680 3300028563 Bacteria 7893
38 Ga0265319_1011427 3300028563 Bacteria 3637
39 Ga0265319_1028357 3300028563 Unclassified 1974
40 Ga0265318_10000526 3300028577 Bacteria 27497
41 Ga0265318_10001896 3300028577 Bacteria 11719
42 Ga0265318_10020782 3300028577 Unclassified 2644
43 Ga0265336_10000002 3300028666 Bacteria 830172
44 Ga0265338_10000001 3300028800 Bacteria 1177449
45 Ga0265324_10006681 3300029957 Bacteria 4767
46 Ga0265340_10000001 3300031247 Bacteria 1647668
47 Ga0265339_10024370 3300031249 Bacteria 3487
48 Ga0265327_10003356 3300031251 Bacteria 15435
49 Ga0265327_10036168 3300031251 Bacteria 2718
50 Ga0265316_10009105 3300031344 Bacteria 9145
51 Ga0307409_100022844 3300031995 Bacteria 4319
52 Ga0307416_100001328 3300032002 Bacteria 13333
53 Ga0307415_100000030 3300032126 Bacteria 60633
54 Ga0373935_0014062 3300035692 Bacteria 4834
55 Ga0373947_0040311 3300035725 Bacteria 2781
56 Ga0395899_0005245 3300037312 Bacteria 10074
57 Ga0395900_0025017 3300037418 Bacteria 6110
58 Ga0395900_0035913 3300037418 Bacteria 5107
59 Ga0395900_0082914 3300037418 Bacteria 3294
60 Ga0395898_0006895 3300037466 Bacteria 12085
61 Ga0395898_0059055 3300037466 Bacteria 3733
62 Ga0395898_0088636 3300037466 Bacteria 2978
63 Ga0395901_0002192 3300038443 Bacteria 19936
64 Ga0395901_0017105 3300038443 Bacteria 7393
65 Ga0395901_0030218 3300038443 Bacteria 5582
66 Ga0436360_0172847 3300039438 Bacteria 1808
67 Ga0436362_0937017 3300039453 Bacteria 6117
68 Ga0466963_0039704 3300044694 Bacteria 3083
69 Ga0466957_0000179 3300044842 Bacteria 28505
70 Ga0466958_0012367 3300045836 Bacteria 4834
71 Ga0466958_0020633 3300045836 Bacteria 3845
72 Ga0495653_0012531 3300046463 Bacteria 6922
73 Ga0495664_0000022 3300046477 Bacteria 134123
74 Ga0495618_0000035 3300046514 Bacteria 102739
75 Ga0495628_0102897 3300046516 Bacteria 2203
76 Ga0495630_0004782 3300046517 Bacteria 9498
77 Ga0495630_0025932 3300046517 Bacteria 4337
78 Ga0495652_0074757 3300046529 Bacteria 2817
79 Ga0495645_0000772 3300046543 Bacteria 21920
80 Ga0495657_0000027 3300046675 Bacteria 131421
81 Ga0495600_0083377 3300046809 Bacteria 2086
82 Ga0495581_0094066 3300047315 Unclassified 1740
83 Ga0495604_0000387 3300047317 Bacteria 39791
84 Ga0495684_0006295 3300047471 Bacteria 9224
85 Ga0495684_0067500 3300047471 Bacteria 2720
86 Ga0496100_0004249 3300048903 Bacteria 7571
87 Ga0496102_0000040 3300048905 Bacteria 196737
88 Ga0496102_0086260 3300048905 Bacteria 2899
89 Ga0496103_0000067 3300048906 Bacteria 125906
90 Ga0496106_0058413 3300048909 Bacteria 2920
91 Ga0496107_0007135 3300048910 Bacteria 7698
92 Ga0496108_0095113 3300048911 Unclassified 2536
93 Ga0496109_0025012 3300048912 Bacteria 5316
94 Ga0496109_0070954 3300048912 Unclassified 3197
95 Ga0496111_0180208 3300048914 Bacteria 1570
96 Ga0496112_0012013 3300048915 Bacteria 7942
97 Ga0496112_0048109 3300048915 Bacteria 4182
98 Ga0496115_0000052 3300048918 Bacteria 107262
99 Ga0496115_0000057 3300048918 Bacteria 103176
100 Ga0496115_0003332 3300048918 Bacteria 11521
101 Ga0496124_0064511 3300048927 Bacteria 3057
102 Ga0501067_0000400 3300049583 Bacteria 23694
103 Ga0501067_0018137 3300049583 Bacteria 3897
104 Ga0501068_0001184 3300049584 Bacteria 13874
105 Ga0501069_0000074 3300049585 Bacteria 49633
106 Ga0501069_0014242 3300049585 Bacteria 4247
107 Ga0501070_0079866 3300049586 Bacteria 2707
108 Ga0501072_0098332 3300049588 Bacteria 2326
109 nmdc:mga0n895_4114_c1 3300050512 Bacteria 11852
110 nmdc:mga0rr50_138429_c1 3300050513 Bacteria 1956
111 nmdc:mga0rr50_303914_c1 3300050513 Bacteria 1335
112 nmdc:mga0rr50_34552_c1 3300050513 Bacteria 3621
113 nmdc:mga0a205_4904_c1 3300050515 Bacteria 12032
114 Ga0495601_0007586 3300053077 Bacteria 6370
115 Ga0495601_0059197 3300053077 Bacteria 2429
116 Ga0501084_0031235 3300054114 Bacteria 4454
117 Ga0530510_0004945 3300061734 Bacteria 9203
118 Ga0265337_1002343
119 Ga0070683_100037492
120 Ga0070713_100070978
121 Ga0070701_10056034
122 Ga0070705_100017276
123 Ga0070706_100018813
124 Ga0070707_100034333
125 Ga0070698_100018767
126 Ga0070699_100030395
127 Ga0070696_100159368
128 Ga0068855_100026276
129 Ga0070664_100078241
130 Ga0070664_100140311
131 Ga0068856_100000644
132 Ga0081539_10004480
133 Ga0075433_10000289
134 Ga0075434_100000777
135 Ga0075435_100008811
136 Ga0075435_100085295
137 Ga0105240_10084422
138 Ga0105242_10208838
139 Ga0157371_10001930
140 Ga0157370_10037225
141 Ga0157369_10034975
142 Ga0157369_10059088
143 Ga0157372_10118395
144 Ga0206356_10747886
145 Ga0207699_10049670
146 Ga0207684_10145683
147 Ga0207695_10064275
148 Ga0207693_10077331
149 Ga0207646_10022063
150 Ga0207664_10050126
151 Ga0207664_10088239
152 Ga0207702_10000554
153 Ga0265319_1000965
154 Ga0265319_1003680
155 Ga0265319_1011427
156 Ga0265319_1028357
157 Ga0265318_10000526
158 Ga0265318_10001896
159 Ga0265318_10020782
160 Ga0265336_10000002
161 Ga0265338_10000001
162 Ga0265324_10006681
163 Ga0265340_10000001
164 Ga0265339_10024370
165 Ga0265327_10003356
166 Ga0265327_10036168
167 Ga0265316_10009105
168 Ga0307409_100022844
169 Ga0307416_100001328
170 Ga0307415_100000030
171 Ga0373935_0014062
172 Ga0373947_0040311
173 Ga0395899_0005245
174 Ga0395900_0025017
175 Ga0395900_0035913
176 Ga0395900_0082914
177 Ga0395898_0006895
178 Ga0395898_0059055
179 Ga0395898_0088636
180 Ga0395901_0002192
181 Ga0395901_0017105
182 Ga0395901_0030218
183 Ga0436360_0172847
184 Ga0436362_0937017
185 Ga0466963_0039704
186 Ga0466957_0000179
187 Ga0466958_0012367
188 Ga0466958_0020633
189 Ga0495653_0012531
190 Ga0495664_0000022
191 Ga0495618_0000035
192 Ga0495628_0102897
193 Ga0495630_0004782
194 Ga0495630_0025932
195 Ga0495652_0074757
196 Ga0495645_0000772
197 Ga0495657_0000027
198 Ga0495600_0083377
199 Ga0495581_0094066
200 Ga0495604_0000387
201 Ga0495684_0006295
202 Ga0495684_0067500
203 Ga0496100_0004249
204 Ga0496102_0000040
205 Ga0496102_0086260
206 Ga0496103_0000067
207 Ga0496106_0058413
208 Ga0496107_0007135
209 Ga0496108_0095113
210 Ga0496109_0025012
211 Ga0496109_0070954
212 Ga0496111_0180208
213 Ga0496112_0012013
214 Ga0496112_0048109
215 Ga0496115_0000052
216 Ga0496115_0000057
217 Ga0496115_0003332
218 Ga0496124_0064511
219 Ga0501067_0000400
220 Ga0501067_0018137
221 Ga0501068_0001184
222 Ga0501069_0000074
223 Ga0501069_0014242
224 Ga0501070_0079866
225 Ga0501072_0098332
226 nmdc:mga0n895_4114_c1
227 nmdc:mga0rr50_138429_c1
228 nmdc:mga0rr50_303914_c1
229 nmdc:mga0rr50_34552_c1
230 nmdc:mga0a205_4904_c1
231 Ga0495601_0007586
232 Ga0495601_0059197
233 Ga0501084_0031235
234 Ga0530510_0004945

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01011

PQQ

PQQ enzyme repeat

110

147

0.9

PF13360

PQQ_2

PQQ-like domain

74

244

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yms-assembly1.cif.gz_B structure and assembly of a b-propeller with nine blades and a new conserved repetitive sequence motif 0.8373 108 174
2yms-assembly1.cif.gz_D structure and assembly of a b-propeller with nine blades and a new conserved repetitive sequence motif 0.8304 91 174
7dxn-assembly2.cif.gz_B-2 plant growth-promoting factor yxal from bacillus velezensis 0.7733 47 500
2yms-assembly1.cif.gz_D structure and assembly of a b-propeller with nine blades and a new conserved repetitive sequence motif 0.771 91 174
6g6n-assembly3.cif.gz_C crystal structure of the computationally designed tako8 protein in c2 0.7581 80 500
ID Description Score Start End Superfamily
af_Q9VLL0_923_1012_2.40.10.480 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.8465 80 164 2.40.10.480
af_Q5AH90_892_1045_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.833 385 425 2.30.29.30
af_A0A0R4IBY0_470_547_2.40.10.480 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.8185 108 174 2.40.10.480
af_Q0V845_128_258_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7684 108 174 2.130.10.10
af_A0A1D6QGK2_13_173_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7535 262 458 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A522MHX9-F1-model_v4 Bacterial repeat domain-containing protein 0.951 39 500
AF-A0A2W6AGY7-F1-model_v4 PQQ-like beta-propeller repeat protein 0.9489 106 501
AF-A0A838DMZ8-F1-model_v4 PQQ-binding-like beta-propeller repeat protein 0.9428 26 500
AF-A0A2W6AKY7-F1-model_v4 PQQ-like beta-propeller repeat protein 0.9422 63 500 GO:0016020
AF-A0A521IEV3-F1-model_v4 Fibronectin type-III domain-containing protein 0.9417 49 500 GO:0016020

Map