F089491

General Info

Members Datasets Scaffolds Average Seq Length
116 103 232 385

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0000010|Ga0453684_0000010_406852_408132
Length 426
Sequence MKTFRQSSKAKPQPEAFLPYGRQQVDTTDQRAVAEVLASVWLTCGPKVEEFERALAKACGARHAVAVSNGTAALHVALLAAGVGSGQRVLTTPNTFVASANCAAYVGATPDFADIDPVTLNLSPASLEQRWRDDVRAVVAVDFAGYPCDMPAIAKLARRRGAAVIEDAAHALGTRFRVANRWHKVGGHPWADLTTLSFHPVKTITTGEGGAILTNDDKLAARCRQFRSHGIVRDTVAFQFDPDTLAPRVAGSPAVVAPWYYEMQALGFNYRITDIQCALGISQLAKLSAFIKRRQEVVDCYNKAFAKLSHVRRPVQARQPVAGFEQTRPSWHLYVLQLDFAALGWTRGAFMQALRARGIGSQVHYIPVHLQPFYRATYGYAPGLCPVAEAYYRCCLSLPLYGSMSDADIKRVVAVVTELIGQHGRM

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
32 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
33 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
51 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
52 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
58 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
63 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
64 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
69 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
70 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
71 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
74 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
75 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
76 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
77 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
78 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
79 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
80 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
81 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
82 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
83 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
84 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
85 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
89 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
90 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
91 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
92 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
93 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
96 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
97 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
98 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
99 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
100 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
101 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
102 2791355262 Rhizobium sp. M1 Isolate Nodule
103 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.28
Metatranscriptomes 0
Isolates 1.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.79
Nodule 0.86
Rhizoplane 2.59
Rhizosphere 73.28
Stem 0
Stem Tuber 0
Unclassified 8.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0000010 3300044712 Bacteria 1133422
2 JGI25165J46597_1000013 3300003214 Bacteria 402100
3 rootL2_10221198 3300003322 Bacteria 2054
4 Ga0070670_100031607 3300005331 Bacteria 4560
5 Ga0070670_100286285 3300005331 Bacteria 1439
6 Ga0070680_100131798 3300005336 Bacteria 2092
7 Ga0070673_100042269 3300005364 Bacteria 3513
8 Ga0070667_100148859 3300005367 Bacteria 2055
9 Ga0070708_100086582 3300005445 Bacteria 2846
10 Ga0070707_100008358 3300005468 Bacteria 9609
11 Ga0070699_100005470 3300005518 Bacteria 11134
12 Ga0070679_100000663 3300005530 Bacteria 29349
13 Ga0070697_100052913 3300005536 Bacteria 3300
14 Ga0070697_100191253 3300005536 Bacteria 1737
15 Ga0070665_100149084 3300005548 Bacteria 2342
16 Ga0081455_10048104 3300005937 Bacteria 3687
17 Ga0075368_10005024 3300006042 Bacteria 4523
18 Ga0075363_100054069 3300006048 Bacteria 2148
19 Ga0070712_100118126 3300006175 Bacteria 1991
20 Ga0075367_10021887 3300006178 Bacteria 3580
21 Ga0075366_10012433 3300006195 Bacteria 4828
22 Ga0097621_100003138 3300006237 Bacteria 11337
23 Ga0075434_100027814 3300006871 Bacteria 5552
24 Ga0105240_10458772 3300009093 Unclassified 1424
25 Ga0111539_10001136 3300009094 Bacteria 35188
26 Ga0105245_10041685 3300009098 Bacteria 4092
27 Ga0105242_10056103 3300009176 Bacteria 3223
28 Ga0157370_10004042 3300013104 Bacteria 17036
29 Ga0157372_10166659 3300013307 Bacteria 2548
30 Ga0157375_10174876 3300013308 Unclassified 2296
31 Ga0213873_10026780 3300021358 Unclassified 1402
32 Ga0213876_10044659 3300021384 Bacteria 2342
33 Ga0213875_10005956 3300021388 Bacteria 6468
34 Ga0207427_104040 3300025231 Bacteria 2666
35 Ga0209233_1000013 3300025261 Bacteria 1013785
36 Ga0207707_10001813 3300025912 Bacteria 19610
37 Ga0207660_10092031 3300025917 Bacteria 2250
38 Ga0207652_10237299 3300025921 Bacteria 1643
39 Ga0207646_10008874 3300025922 Bacteria 10014
40 Ga0207650_10038559 3300025925 Bacteria 3490
41 Ga0207650_10247651 3300025925 Bacteria 1442
42 Ga0207700_10010946 3300025928 Bacteria 5758
43 Ga0207664_10266520 3300025929 Bacteria 1499
44 Ga0207686_10046263 3300025934 Bacteria 2682
45 Ga0207691_10239169 3300025940 Unclassified 1570
46 Ga0207667_10206030 3300025949 Unclassified 2016
47 Ga0207658_10129400 3300025986 Bacteria 2026
48 Ga0207675_100107825 3300026118 Bacteria 2626
49 Ga0209813_10031939 3300027866 Unclassified 1557
50 Ga0207428_10029735 3300027907 Bacteria 4523
51 Ga0268266_10119136 3300028379 Bacteria 2347
52 Ga0265338_10000110 3300028800 Bacteria 152188
53 Ga0265338_10002887 3300028800 Bacteria 25044
54 Ga0265332_10023273 3300031238 Bacteria 2732
55 Ga0265325_10000044 3300031241 Bacteria 89107
56 Ga0265325_10001437 3300031241 Bacteria 16759
57 Ga0265340_10049508 3300031247 Bacteria 2041
58 Ga0265339_10002932 3300031249 Bacteria 12064
59 Ga0265339_10010584 3300031249 Bacteria 5722
60 Ga0265331_10072175 3300031250 Bacteria 1613
61 Ga0265327_10002460 3300031251 Bacteria 19506
62 Ga0265316_10035162 3300031344 Bacteria 4063
63 Ga0265313_10012668 3300031595 Bacteria 5125
64 Ga0265342_10000309 3300031712 Bacteria 55309
65 Ga0307413_10051936 3300031824 Bacteria 2473
66 Ga0307410_10157569 3300031852 Bacteria 1698
67 Ga0307406_10063385 3300031901 Bacteria 2394
68 Ga0307411_10074549 3300032005 Bacteria 2313
69 Ga0395899_0000718 3300037312 Bacteria 33160
70 Ga0395900_0159928 3300037418 Bacteria 2298
71 Ga0395898_0001907 3300037466 Bacteria 26561
72 Ga0395898_0196109 3300037466 Bacteria 1929
73 Ga0395905_0009331 3300037471 Bacteria 9597
74 Ga0436364_0667106 3300037853 Bacteria 14641
75 Ga0436364_1384904 3300037853 Bacteria 1312
76 Ga0395901_0006365 3300038443 Bacteria 11965
77 Ga0400490_31751 3300038726 Bacteria 15309
78 Ga0400488_20474 3300038741 Unclassified 2102
79 Ga0400483_108347 3300039062 Bacteria 1678
80 Ga0436365_0968646 3300039437 Bacteria 4661
81 Ga0436362_0161259 3300039453 Bacteria 3856
82 Ga0439460_0010486 3300042461 Bacteria 2373
83 Ga0451577_0004996 3300042876 Bacteria 13747
84 Ga0466963_0003435 3300044694 Bacteria 9068
85 Ga0453684_0015448 3300044712 Bacteria 12072
86 Ga0453684_0016566 3300044712 Bacteria 11508
87 Ga0466957_0084326 3300044842 Bacteria 1983
88 Ga0466960_0000033 3300044901 Bacteria 46153
89 Ga0451576_0002084 3300045051 Bacteria 31236
90 Ga0495650_0000398 3300046471 Bacteria 72672
91 Ga0495580_0012098 3300046472 Bacteria 6641
92 Ga0495645_0000560 3300046543 Bacteria 25580
93 Ga0496112_0005272 3300048915 Bacteria 11145
94 Ga0496112_0020881 3300048915 Bacteria 6216
95 Ga0496113_0050146 3300048916 Bacteria 3111
96 Ga0496125_0057217 3300048928 Bacteria 3160
97 Ga0501034_0006316 3300049571 Bacteria 12758
98 Ga0501067_0037867 3300049583 Bacteria 2678
99 Ga0501076_0307783 3300049592 Bacteria 1299
100 Ga0501077_0144364 3300049593 Bacteria 1510
101 Ga0501083_0010682 3300049744 Bacteria 6459
102 nmdc:mga00v17_45407_c1 3300050491 Bacteria 2654
103 nmdc:mga0k408_32798_c1 3300050493 Bacteria 2967
104 nmdc:mga04h51_6153_c1 3300050495 Unclassified 3096
105 nmdc:mga05p37_504348_c1 3300050507 Bacteria 1388
106 nmdc:mga08y16_2308_c1 3300050511 Bacteria 19531
107 nmdc:mga0n895_17619_c1 3300050512 Bacteria 6588
108 nmdc:mga0n895_46116_c1 3300050512 Bacteria 2897
109 nmdc:mga08x19_232598_c1 3300050514 Bacteria 1269
110 Ga0500641_0007984 3300053096 Unclassified 3773
111 Ga0500568_0000040 3300053139 Bacteria 130557
112 Ga0500568_0000081 3300053139 Bacteria 92418
113 Ga0500616_0004910 3300053153 Bacteria 9296
114 Ga0500620_060975 3300053155 Unclassified 1284
115 2793337688 2791355262 Bacteria 6774204
116 8054002240 8054002106 Bacteria 7987183
117 Ga0453684_0000010
118 JGI25165J46597_1000013
119 rootL2_10221198
120 Ga0070670_100031607
121 Ga0070670_100286285
122 Ga0070680_100131798
123 Ga0070673_100042269
124 Ga0070667_100148859
125 Ga0070708_100086582
126 Ga0070707_100008358
127 Ga0070699_100005470
128 Ga0070679_100000663
129 Ga0070697_100052913
130 Ga0070697_100191253
131 Ga0070665_100149084
132 Ga0081455_10048104
133 Ga0075368_10005024
134 Ga0075363_100054069
135 Ga0070712_100118126
136 Ga0075367_10021887
137 Ga0075366_10012433
138 Ga0097621_100003138
139 Ga0075434_100027814
140 Ga0105240_10458772
141 Ga0111539_10001136
142 Ga0105245_10041685
143 Ga0105242_10056103
144 Ga0157370_10004042
145 Ga0157372_10166659
146 Ga0157375_10174876
147 Ga0213873_10026780
148 Ga0213876_10044659
149 Ga0213875_10005956
150 Ga0207427_104040
151 Ga0209233_1000013
152 Ga0207707_10001813
153 Ga0207660_10092031
154 Ga0207652_10237299
155 Ga0207646_10008874
156 Ga0207650_10038559
157 Ga0207650_10247651
158 Ga0207700_10010946
159 Ga0207664_10266520
160 Ga0207686_10046263
161 Ga0207691_10239169
162 Ga0207667_10206030
163 Ga0207658_10129400
164 Ga0207675_100107825
165 Ga0209813_10031939
166 Ga0207428_10029735
167 Ga0268266_10119136
168 Ga0265338_10000110
169 Ga0265338_10002887
170 Ga0265332_10023273
171 Ga0265325_10000044
172 Ga0265325_10001437
173 Ga0265340_10049508
174 Ga0265339_10002932
175 Ga0265339_10010584
176 Ga0265331_10072175
177 Ga0265327_10002460
178 Ga0265316_10035162
179 Ga0265313_10012668
180 Ga0265342_10000309
181 Ga0307413_10051936
182 Ga0307410_10157569
183 Ga0307406_10063385
184 Ga0307411_10074549
185 Ga0395899_0000718
186 Ga0395900_0159928
187 Ga0395898_0001907
188 Ga0395898_0196109
189 Ga0395905_0009331
190 Ga0436364_0667106
191 Ga0436364_1384904
192 Ga0395901_0006365
193 Ga0400490_31751
194 Ga0400488_20474
195 Ga0400483_108347
196 Ga0436365_0968646
197 Ga0436362_0161259
198 Ga0439460_0010486
199 Ga0451577_0004996
200 Ga0466963_0003435
201 Ga0453684_0015448
202 Ga0453684_0016566
203 Ga0466957_0084326
204 Ga0466960_0000033
205 Ga0451576_0002084
206 Ga0495650_0000398
207 Ga0495580_0012098
208 Ga0495645_0000560
209 Ga0496112_0005272
210 Ga0496112_0020881
211 Ga0496113_0050146
212 Ga0496125_0057217
213 Ga0501034_0006316
214 Ga0501067_0037867
215 Ga0501076_0307783
216 Ga0501077_0144364
217 Ga0501083_0010682
218 nmdc:mga00v17_45407_c1
219 nmdc:mga0k408_32798_c1
220 nmdc:mga04h51_6153_c1
221 nmdc:mga05p37_504348_c1
222 nmdc:mga08y16_2308_c1
223 nmdc:mga0n895_17619_c1
224 nmdc:mga0n895_46116_c1
225 nmdc:mga08x19_232598_c1
226 Ga0500641_0007984
227 Ga0500568_0000040
228 Ga0500568_0000081
229 Ga0500616_0004910
230 Ga0500620_060975
231 2793337688
232 8054002240

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

23

417

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1mdo-assembly1.cif.gz_A crystal structure of arnb aminotransferase with pyridomine 5' phosphate 0.9637 2 377
5uid-assembly2.cif.gz_D the crystal structure of an aminotransferase tlmj from streptoalloteichus hindustanus 0.9601 1 379
5uid-assembly2.cif.gz_C the crystal structure of an aminotransferase tlmj from streptoalloteichus hindustanus 0.9581 1 379
8su6-assembly1.cif.gz_B crystal structure of arnb transferase from klebsiella aerogenes (lattice translocation disorder, p1 form2) 0.955 2 375
4oca-assembly1.cif.gz_A-2 cryatal structure of arnb k188a complexted with plp and udp-ara4n 0.9535 2 376
ID Description Score Start End Superfamily
1mdxA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9623 1 250 3.40.640.10
4lc3B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9548 1 250 3.40.640.10
1mdxA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9505 1 250 3.40.640.10
af_L0T6V0_4_199_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9497 1 194 3.40.640.10
4wfpA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9494 1 250 3.40.640.10
ID Description Score Start End GO Terms
AF-X1B8Q7-F1-model_v4 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.9893 1 129 GO:0000271
GO:0008483
GO:0030170
AF-A0A2J0LSW6-F1-model_v4 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.9868 1 188 GO:0000271
GO:0008483
GO:0030170
AF-X1L0T4-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9849 36 159 GO:0000271
GO:0008483
GO:0030170
AF-X0VYK0-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9845 14 152 GO:0000271
GO:0008483
GO:0030170
AF-A0A846NWR9-F1-model_v4 deleted 0.9823 1 149

Map