F084934

General Info

Members Datasets Scaffolds Average Seq Length
115 98 230 479

Family's Representative Sequence

Representative Sequence 3300044901|Ga0466960_0024257|Ga0466960_0024257_583_2187
Length 534
Sequence MDWKCPDHRPDTTPAYLAAGMSTSIDITTPSLTRGRWLDHWEPENATFWETTGKKIARKNLILSIFAENLGFSVWVLWTIIVINLANVGIVLSLPEQFWLTAVPNLIGSALRLPYTFAVPKFGGRLWTGISASLLLIPVTLAAVILPSGWLAHQGHDAQFWILLACAATAGVGGGNFSSSMANISFFYPERRKGFALGLNAAGGNLGVAITQLLVPLVIIVGVPSAAVKLPTHPVHLAYAGIMWMPLIVLAATCAWLYMDSISDARSDPKAYAMAVRQPQTWIMSILYIGTFGSFIGYSFALPLVIKNTFPEFLAQHPFIATYLAGLGFMGALIGSVARPFGGWLSDNLGGARVTLGCFLGMGAFTLLAIVGVNDHSFATFFAAYMVIFLFAGMGNGSTYRMIPSIFRALGTKEAEDKGLPVADTALSFKRQAAAVIGIAGSIGAFGGFLIQVVLRQASLSTVIEMSKATKTITDKAQLAAAKAHIAATHADWSIPALWVFLAAYVVFAAMTWFFYMRKSFATDKVPSLAYASV

Samples

Sample ID Description Type Environment
1 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
28 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
29 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
30 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
31 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
32 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
33 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
34 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
35 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
36 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
37 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
38 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
39 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
40 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
41 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
42 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
43 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
44 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
45 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
46 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
47 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
48 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
49 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
50 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
51 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
52 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
53 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
54 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
55 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
56 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
57 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
58 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
59 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
60 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
61 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
62 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
63 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
64 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
65 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
66 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
67 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
74 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
75 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
76 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
77 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
78 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
79 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
80 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
81 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
82 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
83 2671180195 Frankia sp. CcI49 Isolate Nodule
84 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
85 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
86 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
87 2773857922 Frankia sp. CcI49 Isolate Nodule
88 2773857933 Frankia sp. BMG5.30 Isolate Nodule
89 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
90 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
91 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
92 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
93 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
94 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
95 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
96 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
97 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
98 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.09
Metatranscriptomes 0
Isolates 13.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.48
Nodule 4.35
Rhizoplane 15.65
Rhizosphere 55.65
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466960_0024257 3300044901 Bacteria 2735
2 JGI25406J46586_10000263 3300003203 Bacteria 23459
3 Ga0070680_100091136 3300005336 Bacteria 2523
4 Ga0070682_100065853 3300005337 Bacteria 2304
5 Ga0070667_100004256 3300005367 Bacteria 12089
6 Ga0070708_100003404 3300005445 Bacteria 12455
7 Ga0070681_10109230 3300005458 Bacteria 2706
8 Ga0070684_100126330 3300005535 Bacteria 2304
9 Ga0070665_100001565 3300005548 Bacteria 26382
10 Ga0068855_100307136 3300005563 Bacteria 1756
11 Ga0068856_100198881 3300005614 Bacteria 2019
12 Ga0068859_100086003 3300005617 Bacteria 3190
13 Ga0081455_10000773 3300005937 Bacteria 41270
14 Ga0081455_10052593 3300005937 Bacteria 3485
15 Ga0081539_10000109 3300005985 Bacteria 193696
16 Ga0081539_10000125 3300005985 Bacteria 180646
17 Ga0081539_10000195 3300005985 Bacteria 141188
18 Ga0081539_10007480 3300005985 Bacteria 9935
19 Ga0075365_10006718 3300006038 Bacteria 6362
20 Ga0075364_10002319 3300006051 Bacteria 10671
21 Ga0075430_100018002 3300006846 Bacteria 6013
22 Ga0075431_100000150 3300006847 Bacteria 47470
23 Ga0097620_100086003 3300006931 Bacteria 3190
24 Ga0111539_10016723 3300009094 Bacteria 9090
25 Ga0114129_10000278 3300009147 Bacteria 58533
26 Ga0114129_10053414 3300009147 Bacteria 5666
27 Ga0105239_10187781 3300010375 Bacteria 2313
28 Ga0207660_10031092 3300025917 Bacteria 3674
29 Ga0207661_10225926 3300025944 Bacteria 1656
30 Ga0207658_10001006 3300025986 Bacteria 23090
31 Ga0268266_10000492 3300028379 Bacteria 56439
32 Ga0307515_10065184 3300028794 Bacteria 5077
33 Ga0307512_10005283 3300030522 Bacteria 13559
34 Ga0307513_10020180 3300031456 Bacteria 7906
35 Ga0307513_10025328 3300031456 Bacteria 6877
36 Ga0307409_100190977 3300031995 Bacteria 1823
37 Ga0395900_0006386 3300037418 Bacteria 12289
38 Ga0395900_0173036 3300037418 Bacteria 2197
39 Ga0395905_0010281 3300037471 Bacteria 9111
40 Ga0436364_0010416 3300037853 Bacteria 2777
41 Ga0436364_0789201 3300037853 Bacteria 8107
42 Ga0395901_0004443 3300038443 Bacteria 14145
43 Ga0436365_0769124 3300039437 Bacteria 15002
44 Ga0451793_0292862 3300041452 Bacteria 6812
45 Ga0451833_0184790 3300041491 Bacteria 6431
46 Ga0451837_0596408 3300041494 Bacteria 3393
47 Ga0466961_0020830 3300044693 Bacteria 4220
48 Ga0466970_0049749 3300044765 Bacteria 2235
49 Ga0466960_0000055 3300044901 Bacteria 37691
50 Ga0495603_0128911 3300046455 Bacteria 1474
51 Ga0495606_0000667 3300046507 Bacteria 53652
52 Ga0495668_0000842 3300046616 Bacteria 34776
53 Ga0495625_0004019 3300046660 Bacteria 14066
54 Ga0495683_0074663 3300047323 Bacteria 1661
55 Ga0495626_0000148 3300048091 Bacteria 86787
56 Ga0496100_0076636 3300048903 Bacteria 2246
57 Ga0496101_0056900 3300048904 Bacteria 2827
58 Ga0496102_0005421 3300048905 Bacteria 10826
59 Ga0496102_0036005 3300048905 Bacteria 4457
60 Ga0496102_0165016 3300048905 Bacteria 2084
61 Ga0496103_0051625 3300048906 Bacteria 2545
62 Ga0496104_0119182 3300048907 Bacteria 2534
63 Ga0496105_0005945 3300048908 Bacteria 9312
64 Ga0496105_0018617 3300048908 Bacteria 5589
65 Ga0496106_0051386 3300048909 Bacteria 3107
66 Ga0496107_0191796 3300048910 Bacteria 1518
67 Ga0496108_0030693 3300048911 Bacteria 4453
68 Ga0496109_0011471 3300048912 Bacteria 7621
69 Ga0496109_0031477 3300048912 Bacteria 4760
70 Ga0496109_0062090 3300048912 Bacteria 3416
71 Ga0496110_0125087 3300048913 Bacteria 2319
72 Ga0496111_0025306 3300048914 Bacteria 4188
73 Ga0496117_0000619 3300048920 Bacteria 57505
74 Ga0496118_0000766 3300048921 Bacteria 51540
75 Ga0496119_0006241 3300048922 Bacteria 11133
76 Ga0496119_0017939 3300048922 Bacteria 5295
77 Ga0496120_0001115 3300048923 Bacteria 34837
78 Ga0496121_0029305 3300048924 Bacteria 5095
79 Ga0496121_0128848 3300048924 Bacteria 1898
80 Ga0496122_0062381 3300048925 Bacteria 2729
81 Ga0496123_0029783 3300048926 Bacteria 4009
82 Ga0496124_0048175 3300048927 Bacteria 3643
83 Ga0501032_0134541 3300049569 Bacteria 1629
84 Ga0501033_0000068 3300049570 Bacteria 98461
85 Ga0501034_0038094 3300049571 Bacteria 4870
86 Ga0501036_0145295 3300049572 Bacteria 2000
87 Ga0501046_0065377 3300049580 Bacteria 2837
88 Ga0501047_0028853 3300049581 Bacteria 5353
89 Ga0501067_0001912 3300049583 Bacteria 11456
90 Ga0501067_0037864 3300049583 Bacteria 2678
91 Ga0501070_0048435 3300049586 Bacteria 3530
92 Ga0501073_0053019 3300049589 Bacteria 2839
93 Ga0501074_0104408 3300049590 Bacteria 2028
94 nmdc:mga06r32_174_c1 3300050510 Bacteria 49983
95 Ga0495612_0015115 3300053078 Bacteria 3095
96 Ga0500556_0000728 3300053104 Bacteria 19837
97 Ga0500616_0056454 3300053153 Bacteria 2049
98 Ga0501082_0030882 3300060353 Bacteria 4618
99 Ga0530510_0091167 3300061734 Bacteria 2224
100 2671839449 2671180195 Bacteria 9757215
101 2676474132 2675903058 Bacteria 6822861
102 2687579656 2687453129 Bacteria 4387428
103 2689991527 2687453743 Bacteria 8361025
104 2774857605 2773857922 Bacteria 9757215
105 2774901107 2773857933 Bacteria 5818019
106 2791913062 2791354901 Bacteria 8322202
107 2795796051 2795385472 Bacteria 6627535
108 2827629023 2827628540 Bacteria 6858585
109 2861522145 2861520306 Bacteria 8348283
110 2887485738 2887478801 Bacteria 8972725
111 2891328048 2891326441 Bacteria 6439512
112 2891397329 2891395885 Bacteria 9251614
113 2891557065 2891554331 Bacteria 8812224
114 8001785125 8001781756 Bacteria 9586736
115 8055160304 8055157932 Bacteria 6429399
116 Ga0466960_0024257
117 JGI25406J46586_10000263
118 Ga0070680_100091136
119 Ga0070682_100065853
120 Ga0070667_100004256
121 Ga0070708_100003404
122 Ga0070681_10109230
123 Ga0070684_100126330
124 Ga0070665_100001565
125 Ga0068855_100307136
126 Ga0068856_100198881
127 Ga0068859_100086003
128 Ga0081455_10000773
129 Ga0081455_10052593
130 Ga0081539_10000109
131 Ga0081539_10000125
132 Ga0081539_10000195
133 Ga0081539_10007480
134 Ga0075365_10006718
135 Ga0075364_10002319
136 Ga0075430_100018002
137 Ga0075431_100000150
138 Ga0097620_100086003
139 Ga0111539_10016723
140 Ga0114129_10000278
141 Ga0114129_10053414
142 Ga0105239_10187781
143 Ga0207660_10031092
144 Ga0207661_10225926
145 Ga0207658_10001006
146 Ga0268266_10000492
147 Ga0307515_10065184
148 Ga0307512_10005283
149 Ga0307513_10020180
150 Ga0307513_10025328
151 Ga0307409_100190977
152 Ga0395900_0006386
153 Ga0395900_0173036
154 Ga0395905_0010281
155 Ga0436364_0010416
156 Ga0436364_0789201
157 Ga0395901_0004443
158 Ga0436365_0769124
159 Ga0451793_0292862
160 Ga0451833_0184790
161 Ga0451837_0596408
162 Ga0466961_0020830
163 Ga0466970_0049749
164 Ga0466960_0000055
165 Ga0495603_0128911
166 Ga0495606_0000667
167 Ga0495668_0000842
168 Ga0495625_0004019
169 Ga0495683_0074663
170 Ga0495626_0000148
171 Ga0496100_0076636
172 Ga0496101_0056900
173 Ga0496102_0005421
174 Ga0496102_0036005
175 Ga0496102_0165016
176 Ga0496103_0051625
177 Ga0496104_0119182
178 Ga0496105_0005945
179 Ga0496105_0018617
180 Ga0496106_0051386
181 Ga0496107_0191796
182 Ga0496108_0030693
183 Ga0496109_0011471
184 Ga0496109_0031477
185 Ga0496109_0062090
186 Ga0496110_0125087
187 Ga0496111_0025306
188 Ga0496117_0000619
189 Ga0496118_0000766
190 Ga0496119_0006241
191 Ga0496119_0017939
192 Ga0496120_0001115
193 Ga0496121_0029305
194 Ga0496121_0128848
195 Ga0496122_0062381
196 Ga0496123_0029783
197 Ga0496124_0048175
198 Ga0501032_0134541
199 Ga0501033_0000068
200 Ga0501034_0038094
201 Ga0501036_0145295
202 Ga0501046_0065377
203 Ga0501047_0028853
204 Ga0501067_0001912
205 Ga0501067_0037864
206 Ga0501070_0048435
207 Ga0501073_0053019
208 Ga0501074_0104408
209 nmdc:mga06r32_174_c1
210 Ga0495612_0015115
211 Ga0500556_0000728
212 Ga0500616_0056454
213 Ga0501082_0030882
214 Ga0530510_0091167
215 2671839449
216 2676474132
217 2687579656
218 2689991527
219 2774857605
220 2774901107
221 2791913062
222 2795796051
223 2827629023
224 2861522145
225 2887485738
226 2891328048
227 2891397329
228 2891557065
229 8001785125
230 8055160304

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

61

452

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iu9-assembly2.cif.gz_A crystal structure of a membrane transporter 0.8623 23 483
4iu9-assembly2.cif.gz_A crystal structure of a membrane transporter 0.8581 23 483
4jre-assembly1.cif.gz_D crystal structure of nitrate/nitrite exchanger nark with nitrite bound 0.8578 23 483
4u4w-assembly2.cif.gz_B structure of a nitrate/nitrite antiporter nark in nitrate-bound occluded state 0.8559 20 483
4u4w-assembly1.cif.gz_A structure of a nitrate/nitrite antiporter nark in nitrate-bound occluded state 0.8544 20 483
ID Description Score Start End Superfamily
af_Q2FVN1_5_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.902 42 245 1.20.1250.20
af_Q2FVN1_5_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8925 42 245 1.20.1250.20
af_P9WJY7_2_188_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8868 42 246 1.20.1250.20
af_P95224_14_460_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8695 21 487 1.20.1250.20
af_P41036_15_224_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8665 40 246 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2W2HXU6-F1-model_v4 MFS transporter 0.9368 20 302 GO:0015112
GO:0016020
AF-A0A2W2HXU6-F1-model_v4 MFS transporter 0.9132 20 302 GO:0015112
GO:0016020
AF-A0A3D1IYF8-F1-model_v4 Nitrate/nitrite transporter 0.8897 20 283 GO:0015112
GO:0016020
AF-A0A3D1IYF8-F1-model_v4 Nitrate/nitrite transporter 0.8768 20 283 GO:0015112
GO:0016020
AF-A0A5D6WTC5-F1-model_v4 MFS transporter 0.8612 26 482 GO:0005886
GO:0015112

Map