F080966

General Info

Members Datasets Scaffolds Average Seq Length
114 93 101 183

Family's Representative Sequence

Representative Sequence 3300053119|Ga0500595_000828|Ga0500595_000828_4693_5307
Length 204
Sequence MQPNSLPEWALRQIRPAQGKRMTDRPDIETLSTRVVYENRWMRVREDAIRYRDGSTGIYGVVMKSNYVLVVPLDSDGKLHLVEQYRYPIGIRSWEFPQGAWEGKPDADPLELARGELREETGLDAAEIIHAGNLYQACGYATQSYNIYLARNLRRAEAKLEATEQDLITRTFDSAEVLDMVQQGIIKDASTVAALGLLKLKGLL

Samples

Sample ID Description Type Environment
1 2508501039 Frankia saprophytica CN3 Isolate Nodule
2 2508501050 Microvirga lupini Lut6 Isolate Nodule
3 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
4 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
5 2643221607 Rhizobium sp. Root73 Isolate Unclassified
6 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
7 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
8 2687453737 Frankia sp. BMG5.36 Isolate Nodule
9 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
10 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
30 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
31 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
32 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
38 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
39 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
40 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
41 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
42 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
43 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
44 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
45 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
46 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
47 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
48 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
49 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
50 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
51 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
52 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
53 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
54 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
55 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
56 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
57 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
58 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
59 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
60 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
61 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
62 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
63 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
64 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
65 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
66 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
71 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
72 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
73 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
74 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
77 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
78 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
79 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
80 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
81 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
82 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
83 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
84 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
85 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
86 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
87 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
88 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
89 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
90 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
91 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
92 8002784119 Frankia sp. AgB1.9 Isolate Nodule
93 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.6
Metatranscriptomes 0
Isolates 11.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.05
Nodule 6.14
Rhizoplane 2.63
Rhizosphere 50.88
Stem 0
Stem Tuber 0
Unclassified 19.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10000088 3300003215 Bacteria 110970
2 JGI25153J46596_10000117 3300003215 Bacteria 89953
3 rootH1_10144457 3300003316 Bacteria 1529
4 rootL2_10029905 3300003322 Unclassified 1177
5 Ga0070682_100166897 3300005337 Unclassified 1526
6 Ga0070709_10212187 3300005434 Bacteria 1377
7 Ga0070714_100420674 3300005435 Bacteria 1266
8 Ga0070713_100209364 3300005436 Bacteria 1764
9 Ga0070679_100551792 3300005530 Bacteria 1096
10 Ga0070684_100307566 3300005535 Bacteria 1455
11 Ga0068859_100000154 3300005617 Bacteria 65719
12 Ga0068863_100000396 3300005841 Bacteria 44275
13 Ga0068862_100000021 3300005844 Bacteria 218035
14 Ga0070712_100209898 3300006175 Unclassified 1535
15 Ga0075431_100223415 3300006847 Unclassified 1921
16 Ga0097620_100000154 3300006931 Bacteria 65719
17 Ga0075435_100424427 3300007076 Bacteria 1145
18 Ga0105238_10007598 3300009551 Bacteria 10862
19 Ga0105238_11434907 3300009551 Bacteria 718
20 Ga0163163_10001861 3300014325 Bacteria 17812
21 Ga0182008_10064576 3300014497 Bacteria 1802
22 Ga0209758_1000061 3300025297 Bacteria 320172
23 Ga0209758_1041992 3300025297 Bacteria 1701
24 Ga0207426_1012800 3300025302 Bacteria 3137
25 Ga0209257_1045624 3300025304 Bacteria 1271
26 Ga0209257_1053838 3300025304 Bacteria 1123
27 Ga0207693_10114854 3300025915 Bacteria 2113
28 Ga0207694_10289646 3300025924 Bacteria 1346
29 Ga0207694_10844152 3300025924 Bacteria 774
30 Ga0207641_10807782 3300026088 Bacteria 928
31 Ga0268265_10000034 3300028380 Bacteria 218695
32 Ga0307515_10002234 3300028794 Bacteria 42472
33 Ga0265340_10042547 3300031247 Bacteria 2230
34 Ga0265331_10021759 3300031250 Bacteria 3277
35 Ga0265316_10369688 3300031344 Bacteria 1036
36 Ga0307513_10058649 3300031456 Bacteria 4089
37 Ga0307513_10130098 3300031456 Bacteria 2465
38 Ga0307513_10223164 3300031456 Bacteria 1703
39 Ga0307509_10255549 3300031507 Unclassified 1532
40 Ga0265313_10001011 3300031595 Bacteria 27495
41 Ga0307514_10001030 3300031649 Bacteria 40201
42 Ga0307516_10468657 3300031730 Unclassified 915
43 Ga0373927_0190713 3300035695 Bacteria 1345
44 Ga0373925_0052085 3300037068 Bacteria 3058
45 Ga0436362_1028197 3300039453 Unclassified 654
46 Ga0451807_0874796 3300041486 Bacteria 1173
47 Ga0466960_0102430 3300044901 Bacteria 1476
48 Ga0451576_0215160 3300045051 Unclassified 2007
49 Ga0495580_0068893 3300046472 Bacteria 2473
50 Ga0495583_0257252 3300046506 Unclassified 699
51 Ga0495632_0022126 3300046519 Bacteria 3413
52 Ga0495648_0222444 3300046524 Bacteria 930
53 Ga0495609_0020621 3300046538 Bacteria 3044
54 Ga0495668_0003630 3300046616 Bacteria 11427
55 Ga0495683_0040393 3300047323 Bacteria 2357
56 Ga0496102_0162024 3300048905 Bacteria 2104
57 Ga0496116_0000165 3300048919 Bacteria 133688
58 Ga0496117_0000105 3300048920 Bacteria 188970
59 Ga0496117_0004187 3300048920 Bacteria 16111
60 Ga0496118_0000168 3300048921 Bacteria 118938
61 Ga0496118_0002891 3300048921 Bacteria 22356
62 Ga0496119_0002802 3300048922 Bacteria 18691
63 Ga0496121_0071571 3300048924 Bacteria 2788
64 Ga0496123_0125955 3300048926 Unclassified 1430
65 Ga0501034_0058348 3300049571 Bacteria 3879
66 Ga0501034_0602664 3300049571 Bacteria 1004
67 Ga0501036_1290426 3300049572 Bacteria 594
68 Ga0501038_0022235 3300049574 Bacteria 5684
69 Ga0501038_0511722 3300049574 Bacteria 917
70 Ga0501043_0056424 3300049579 Bacteria 3085
71 Ga0501043_0273214 3300049579 Bacteria 1297
72 Ga0501070_0004830 3300049586 Bacteria 11514
73 Ga0501073_0014513 3300049589 Bacteria 5726
74 Ga0501073_0079378 3300049589 Bacteria 2284
75 Ga0501073_0108171 3300049589 Bacteria 1929
76 Ga0501079_0779098 3300049741 Bacteria 753
77 Ga0501080_0054601 3300049742 Bacteria 3720
78 Ga0501080_0233101 3300049742 Bacteria 1682
79 Ga0501035_0683515 3300049822 Bacteria 829
80 Ga0501044_0225322 3300049823 Bacteria 1824
81 Ga0501044_0984880 3300049823 Bacteria 715
82 Ga0501045_0125224 3300049824 Unclassified 1909
83 Ga0500578_0135314 3300053086 Bacteria 1543
84 Ga0500641_0003858 3300053096 Bacteria 5301
85 Ga0500555_002050 3300053103 Bacteria 5928
86 Ga0500556_0018508 3300053104 Bacteria 2200
87 Ga0500595_000828 3300053119 Bacteria 17702
88 Ga0500642_0000892 3300053130 Bacteria 8700
89 Ga0500642_0001377 3300053130 Bacteria 6965
90 Ga0500655_037620 3300053133 Archaea 944
91 Ga0500658_0102830 3300053134 Unclassified 1249
92 Ga0500577_0148330 3300053142 Unclassified 993
93 Ga0500604_0004217 3300053151 Bacteria 3822
94 Ga0500604_0068496 3300053151 Archaea 1127
95 Ga0500604_0070631 3300053151 Unclassified 1113
96 Ga0500616_0059675 3300053153 Unclassified 1980
97 Ga0500616_0329679 3300053153 Bacteria 626
98 Ga0500622_0064238 3300053156 Bacteria 1867
99 Ga0500656_041945 3300053732 Archaea 643
100 Ga0501084_0378318 3300054114 Unclassified 1197
101 Ga0501082_0727264 3300060353 Bacteria 869

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039453 Ga0436362_1028197 Ga0436362_1028197_140_634 154
2 iso_pu_bacteria 2508501114 2509074431 158
3 iso_pu_bacteria 2687453737 2689963396 158
4 3300044901 Ga0466960_0102430 Ga0466960_0102430_737_1273 162
5 3300046506 Ga0495583_0257252 Ga0495583_0257252_186_674 162
6 3300046524 Ga0495648_0222444 Ga0495648_0222444_43_531 162
7 3300046538 Ga0495609_0020621 Ga0495609_0020621_1455_1943 162
8 3300048924 Ga0496121_0071571 Ga0496121_0071571_664_1206 162
9 3300053153 Ga0500616_0329679 Ga0500616_0329679_19_567 162
10 3300053151 Ga0500604_0070631 Ga0500604_0070631_354_905 165
11 3300053156 Ga0500622_0064238 Ga0500622_0064238_1064_1612 169
12 3300005434 Ga0070709_10212187 Ga0070709_102121872 173
13 3300005435 Ga0070714_100420674 Ga0070714_1004206742 173
14 3300049571 Ga0501034_0058348 Ga0501034_0058348_1165_1701 174
15 iso_pu_bacteria 8002784119 8002788679 174
16 iso_pu_bacteria 2508501114 2509078428 175
17 iso_pu_bacteria 2508501050 2508728433 176
18 3300005841 Ga0068863_100000396 Ga0068863_10000039610 178
19 3300048905 Ga0496102_0162024 Ga0496102_0162024_724_1314 178
20 3300048919 Ga0496116_0000165 Ga0496116_0000165_32267_32857 178
21 3300048920 Ga0496117_0004187 Ga0496117_0004187_1726_2316 178
22 3300048921 Ga0496118_0002891 Ga0496118_0002891_7688_8278 178
23 3300048922 Ga0496119_0002802 Ga0496119_0002802_12114_12704 178
24 iso_pu_bacteria 2508501039 2508678305 178
25 iso_pu_bacteria 8005695170 8005699443 178
26 iso_pu_bacteria 2599185156 2599335623 179
27 iso_pu_bacteria 2835312727 2835315030 179
28 iso_pu_bacteria 2842922631 2842927847 179
29 3300003316 rootH1_10144457 rootH1_101444573 180
30 3300005337 Ga0070682_100166897 Ga0070682_1001668972 180
31 3300007076 Ga0075435_100424427 Ga0075435_1004244272 180
32 3300014497 Ga0182008_10064576 Ga0182008_100645762 180
33 3300025304 Ga0209257_1045624 Ga0209257_10456242 180
34 3300028794 Ga0307515_10002234 Ga0307515_1000223445 180
35 3300031456 Ga0307513_10058649 Ga0307513_100586494 180
36 3300031507 Ga0307509_10255549 Ga0307509_102555492 180
37 3300031649 Ga0307514_10001030 Ga0307514_100010301 180
38 3300035695 Ga0373927_0190713 Ga0373927_0190713_299_841 180
39 3300049824 Ga0501045_0125224 Ga0501045_0125224_631_1191 180
40 iso_pu_bacteria 2643221607 2644047114 180
41 iso_pu_bacteria 2643221636 2644203447 180
42 iso_pu_bacteria 2643221686 2644479903 180
43 3300049589 Ga0501073_0014513 Ga0501073_0014513_4434_4979 181
44 3300005436 Ga0070713_100209364 Ga0070713_1002093642 182
45 3300005617 Ga0068859_100000154 Ga0068859_10000015443 182
46 3300005844 Ga0068862_100000021 Ga0068862_100000021101 182
47 3300006931 Ga0097620_100000154 Ga0097620_10000015420 182
48 3300014325 Ga0163163_10001861 Ga0163163_100018613 182
49 3300025302 Ga0207426_1012800 Ga0207426_10128002 182
50 3300028380 Ga0268265_10000034 Ga0268265_1000003492 182
51 3300031456 Ga0307513_10223164 Ga0307513_102231642 182
52 3300031730 Ga0307516_10468657 Ga0307516_104686572 182
53 3300041486 Ga0451807_0874796 Ga0451807_0874796_71_622 182
54 3300045051 Ga0451576_0215160 Ga0451576_0215160_593_1147 182
55 3300046519 Ga0495632_0022126 Ga0495632_0022126_158_712 182
56 3300046616 Ga0495668_0003630 Ga0495668_0003630_4960_5514 182
57 3300047323 Ga0495683_0040393 Ga0495683_0040393_779_1333 182
58 3300048920 Ga0496117_0000105 Ga0496117_0000105_19092_19676 182
59 3300048921 Ga0496118_0000168 Ga0496118_0000168_79674_80258 182
60 3300048926 Ga0496123_0125955 Ga0496123_0125955_774_1328 182
61 3300049571 Ga0501034_0602664 Ga0501034_0602664_207_755 182
62 3300049572 Ga0501036_1290426 Ga0501036_1290426_21_569 182
63 3300049574 Ga0501038_0511722 Ga0501038_0511722_322_870 182
64 3300049579 Ga0501043_0273214 Ga0501043_0273214_196_744 182
65 3300049589 Ga0501073_0108171 Ga0501073_0108171_447_995 182
66 3300049741 Ga0501079_0779098 Ga0501079_0779098_36_584 182
67 3300049742 Ga0501080_0233101 Ga0501080_0233101_169_717 182
68 3300049823 Ga0501044_0984880 Ga0501044_0984880_53_601 182
69 3300053153 Ga0500616_0059675 Ga0500616_0059675_22_576 182
70 3300054114 Ga0501084_0378318 Ga0501084_0378318_188_736 182
71 3300003215 JGI25153J46596_10000088 JGI25153J46596_1000008838 183
72 3300003215 JGI25153J46596_10000117 JGI25153J46596_1000011714 183
73 3300003322 rootL2_10029905 rootL2_100299051 183
74 3300005530 Ga0070679_100551792 Ga0070679_1005517921 183
75 3300005535 Ga0070684_100307566 Ga0070684_1003075661 183
76 3300006175 Ga0070712_100209898 Ga0070712_1002098982 183
77 3300006847 Ga0075431_100223415 Ga0075431_1002234153 183
78 3300009551 Ga0105238_10007598 Ga0105238_100075984 183
79 3300009551 Ga0105238_11434907 Ga0105238_114349071 183
80 3300025297 Ga0209758_1000061 Ga0209758_1000061101 183
81 3300025297 Ga0209758_1041992 Ga0209758_10419923 183
82 3300025304 Ga0209257_1053838 Ga0209257_10538382 183
83 3300025915 Ga0207693_10114854 Ga0207693_101148542 183
84 3300025924 Ga0207694_10289646 Ga0207694_102896462 183
85 3300025924 Ga0207694_10844152 Ga0207694_108441522 183
86 3300026088 Ga0207641_10807782 Ga0207641_108077821 183
87 3300031247 Ga0265340_10042547 Ga0265340_100425472 183
88 3300031250 Ga0265331_10021759 Ga0265331_100217592 183
89 3300031344 Ga0265316_10369688 Ga0265316_103696881 183
90 3300031456 Ga0307513_10130098 Ga0307513_101300982 183
91 3300031595 Ga0265313_10001011 Ga0265313_1000101134 183
92 3300037068 Ga0373925_0052085 Ga0373925_0052085_1933_2502 183
93 3300046472 Ga0495580_0068893 Ga0495580_0068893_861_1430 183
94 3300049574 Ga0501038_0022235 Ga0501038_0022235_4428_4979 183
95 3300049579 Ga0501043_0056424 Ga0501043_0056424_1881_2432 183
96 3300049586 Ga0501070_0004830 Ga0501070_0004830_8051_8602 183
97 3300049589 Ga0501073_0079378 Ga0501073_0079378_602_1153 183
98 3300049742 Ga0501080_0054601 Ga0501080_0054601_1215_1766 183
99 3300049822 Ga0501035_0683515 Ga0501035_0683515_101_652 183
100 3300049823 Ga0501044_0225322 Ga0501044_0225322_1030_1581 183
101 3300053086 Ga0500578_0135314 Ga0500578_0135314_507_1061 183
102 3300053096 Ga0500641_0003858 Ga0500641_0003858_4511_5062 183
103 3300053103 Ga0500555_002050 Ga0500555_002050_2324_2875 183
104 3300053104 Ga0500556_0018508 Ga0500556_0018508_814_1365 183
105 3300053119 Ga0500595_000828 Ga0500595_000828_4693_5307 183
106 3300053130 Ga0500642_0000892 Ga0500642_0000892_857_1408 183
107 3300053130 Ga0500642_0001377 Ga0500642_0001377_6027_6578 183
108 3300053133 Ga0500655_037620 Ga0500655_037620_375_926 183
109 3300053134 Ga0500658_0102830 Ga0500658_0102830_414_965 183
110 3300053142 Ga0500577_0148330 Ga0500577_0148330_308_859 183
111 3300053151 Ga0500604_0004217 Ga0500604_0004217_1408_1959 183
112 3300053151 Ga0500604_0068496 Ga0500604_0068496_529_1080 183
113 3300053732 Ga0500656_041945 Ga0500656_041945_41_592 183
114 3300060353 Ga0501082_0727264 Ga0501082_0727264_293_844 183

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00293

NUDIX

NUDIX domain

63

185

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
1mqw-assembly1.cif.gz_A-2 structure of the mt-adprase in complex with three mn2+ ions and ampcpr, a nudix enzyme 0.9409 6 182
1mk1-assembly1.cif.gz_A structure of the mt-adprase in complex with adpr, a nudix enzyme 0.9332 8 182
5i8u-assembly2.cif.gz_A crystal structure of the rv1700 (mt adprase) e142q mutant 0.9288 6 182
5c7q-assembly1.cif.gz_B crystal structure of the bdellovibrio bacteriovorus nucleoside diphosphate sugar hydrolase 0.9212 4 181
5i8u-assembly4.cif.gz_E crystal structure of the rv1700 (mt adprase) e142q mutant 0.9145 8 182
ID Description Score Start End Superfamily
af_Q2FY72_1_175_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.9459 4 179 3.90.79.10
af_Q2FY72_1_175_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.9304 4 179 3.90.79.10
5c8lB00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.9133 7 181 3.90.79.10
5i8uB00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8875 8 182 3.90.79.10
5c8lB00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.884 7 181 3.90.79.10
ID Description Score Start End GO Terms
AF-A0A839UVE4-F1-model_v4 GDP-mannose pyrophosphatase (GDP-mannose hydrolase) (GDPMK) 0.9916 7 183 GO:0005829
GO:0006753
GO:0019693
AF-A0A511B7V6-F1-model_v4 GDP-mannose pyrophosphatase (GDP-mannose hydrolase) (GDPMK) 0.9902 6 183 GO:0005829
GO:0006753
GO:0019693
AF-A0A4R6H301-F1-model_v4 deleted 0.9894 1 182
AF-G6XJY5-F1-model_v4 GDP-mannose pyrophosphatase (GDP-mannose hydrolase) (GDPMK) 0.9889 6 183 GO:0005829
GO:0006753
GO:0019693
GO:0047631
AF-A4BGV3-F1-model_v4 GDP-mannose pyrophosphatase (GDP-mannose hydrolase) (GDPMK) 0.9884 7 183 GO:0003824
GO:0005829
GO:0006753
GO:0019693

Feature Viewer

pLDDT pTM Quality
94.37 0.88 High
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Predicted Structure (AlphaFold2)

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