F078551

General Info

Members Datasets Scaffolds Average Seq Length
114 99 102 319

Family's Representative Sequence

Representative Sequence 3300009176|Ga0105242_10002644|Ga0105242_1000264411
Length 350
Sequence MKIVFAGTPDFARVALERLLAAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALEHGIAVAQPRSLRLDGKYPDEAAAAREALLAAGADAMVVAAYGLILPQWVLDLMSAARPPEGARTAGSVGAHGLGCLNIHASLLPRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMLLTERLPIAAQDTTATLHDRLAALGGRMIVEALELAACGGLRPEPQPAEGVTYAHKIEKAESAIDWTLPAEAIGRRIRAFDPFPGASTPAQGEVVKLWSCEIDSTQPPLDARPGQILAIDPAGIAVACGQGALRLTVLQRAGGKRLPAADFLRGFPLAPGQMLGAAAEAAAASPERA

Samples

Sample ID Description Type Environment
1 2547132374 Acidovorax radicis N35 Isolate Unclassified
2 2643221609 Acidovorax sp. Root217 Isolate Unclassified
3 2643221611 Acidovorax sp. Root219 Isolate Unclassified
4 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
5 2643221660 Methylibium sp. Root1272 Isolate Unclassified
6 2643221717 Acidovorax sp. Root267 Isolate Unclassified
7 2721755523 Delftia sp. HK171 Isolate Unclassified
8 2816332133 Acidovorax radicis 2721A Isolate Unclassified
9 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
10 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
11 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
12 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
13 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
29 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
30 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
34 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
50 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
53 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
54 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
55 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
56 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
60 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
61 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
62 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
65 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
73 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
74 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
75 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
76 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
77 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
78 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
81 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
82 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
83 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
86 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
87 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
88 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
91 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
92 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
97 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
98 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
99 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.47
Metatranscriptomes 0
Isolates 10.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.16
Nodule 3.51
Rhizoplane 0.88
Rhizosphere 64.04
Stem 0
Stem Tuber 0
Unclassified 18.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055525_1000054 3300003759 Bacteria 216523
2 Ga0055524_1000140 3300003775 Bacteria 85990
3 Ga0055540_1000133 3300003792 Bacteria 75104
4 Ga0065165_1000766 3300005262 Bacteria 43430
5 Ga0070658_10151019 3300005327 Bacteria 1945
6 Ga0070661_100001690 3300005344 Bacteria 15286
7 Ga0070674_100111447 3300005356 Bacteria 2010
8 Ga0070673_100281844 3300005364 Bacteria 1458
9 Ga0070667_100362663 3300005367 Bacteria 1314
10 Ga0070678_100302402 3300005456 Bacteria 1360
11 Ga0070662_100307677 3300005457 Bacteria 1289
12 Ga0070665_100008383 3300005548 Bacteria 10455
13 Ga0070665_100048081 3300005548 Bacteria 4283
14 Ga0070664_100000867 3300005564 Bacteria 23390
15 Ga0068863_100137365 3300005841 Bacteria 2335
16 Ga0075364_10103738 3300006051 Bacteria 1894
17 Ga0075370_10108045 3300006353 Bacteria 1614
18 Ga0079104_1000053 3300006946 Bacteria 168604
19 Ga0079104_1000226 3300006946 Bacteria 77894
20 Ga0105250_10000883 3300009092 Bacteria 17721
21 Ga0105243_10006749 3300009148 Bacteria 8854
22 Ga0105242_10002644 3300009176 Bacteria 14036
23 Ga0213872_10000045 3300021361 Bacteria 112229
24 Ga0213872_10109275 3300021361 Bacteria 1229
25 Ga0209563_100075 3300025230 Bacteria 216575
26 Ga0209675_1015152 3300025291 Bacteria 2306
27 Ga0209050_1001950 3300025298 Bacteria 19526
28 Ga0209050_1024766 3300025298 Bacteria 2064
29 Ga0209256_1000045 3300025299 Bacteria 325506
30 Ga0209051_1000004 3300025303 Bacteria 1155596
31 Ga0209257_1000315 3300025304 Bacteria 102293
32 Ga0207696_1000950 3300025711 Bacteria 17699
33 Ga0207649_10000614 3300025920 Bacteria 24092
34 Ga0207687_10011347 3300025927 Bacteria 5823
35 Ga0207686_10001330 3300025934 Bacteria 14081
36 Ga0207709_10000151 3300025935 Bacteria 94184
37 Ga0207679_10000077 3300025945 Bacteria 86432
38 Ga0207651_10247018 3300025960 Bacteria 1458
39 Ga0207641_10049883 3300026088 Bacteria 3539
40 Ga0207683_10291877 3300026121 Bacteria 1491
41 Ga0209281_1000002 3300027111 Bacteria 1924012
42 Ga0209281_1000147 3300027111 Bacteria 168586
43 Ga0209968_1000851 3300027526 Bacteria 4731
44 Ga0209966_1000117 3300027695 Bacteria 35145
45 Ga0307515_10000096 3300028794 Bacteria 206366
46 Ga0307515_10010282 3300028794 Bacteria 17966
47 Ga0307515_10033375 3300028794 Bacteria 8477
48 Ga0307515_10087418 3300028794 Bacteria 3956
49 Ga0307515_10107502 3300028794 Bacteria 3297
50 Ga0265332_10000006 3300031238 Bacteria 327963
51 Ga0265328_10006292 3300031239 Bacteria 5043
52 Ga0265328_10017501 3300031239 Bacteria 2775
53 Ga0265329_10012048 3300031242 Bacteria 3123
54 Ga0265331_10020278 3300031250 Bacteria 3417
55 Ga0265327_10000080 3300031251 Bacteria 206086
56 Ga0307408_100000072 3300031548 Bacteria 115918
57 Ga0307508_10000142 3300031616 Bacteria 85288
58 Ga0307514_10007646 3300031649 Bacteria 9300
59 Ga0265314_10000882 3300031711 Bacteria 35754
60 Ga0265342_10158206 3300031712 Bacteria 1254
61 Ga0307406_10000122 3300031901 Bacteria 45936
62 Ga0373949_0025329 3300035090 Bacteria 1384
63 Ga0373931_0074763 3300035691 Bacteria 1856
64 Ga0395899_0011048 3300037312 Bacteria 6916
65 Ga0395899_0347362 3300037312 Bacteria 993
66 Ga0395900_0080997 3300037418 Bacteria 3336
67 Ga0395905_0034752 3300037471 Bacteria 4734
68 Ga0395905_0113862 3300037471 Bacteria 2541
69 Ga0395901_0049147 3300038443 Bacteria 4382
70 Ga0395901_0428278 3300038443 Bacteria 1356
71 Ga0436361_0524686 3300039447 Bacteria 114368
72 Ga0436363_0499709 3300039450 Bacteria 1836
73 Ga0439453_0012571 3300041408 Bacteria 1427
74 Ga0450923_004612 3300042125 Bacteria 2169
75 Ga0439464_0003490 3300042439 Bacteria 3970
76 Ga0450918_000057 3300042531 Bacteria 22722
77 Ga0466969_0000018 3300044656 Bacteria 102911
78 Ga0466966_0007237 3300044684 Bacteria 7357
79 Ga0466966_0025945 3300044684 Bacteria 3827
80 Ga0466961_0025018 3300044693 Bacteria 3842
81 Ga0453684_0458422 3300044712 Bacteria 1418
82 Ga0466971_0089344 3300044719 Bacteria 1410
83 Ga0451576_0260343 3300045051 Bacteria 1813
84 Ga0495607_0043335 3300046501 Bacteria 2662
85 Ga0495610_0068693 3300046512 Bacteria 1660
86 Ga0495630_0212693 3300046517 Bacteria 1476
87 Ga0495632_0017040 3300046519 Bacteria 4023
88 Ga0495597_0000250 3300046542 Bacteria 49080
89 Ga0495633_0007309 3300046558 Bacteria 6374
90 Ga0495625_0000827 3300046660 Bacteria 42621
91 Ga0495625_0275221 3300046660 Bacteria 1085
92 Ga0496114_0014146 3300048917 Bacteria 6399
93 Ga0496122_0119532 3300048925 Bacteria 1703
94 Ga0496123_0039564 3300048926 Bacteria 3296
95 Ga0496125_0006417 3300048928 Bacteria 12714
96 Ga0501047_0139785 3300049581 Bacteria 2301
97 Ga0501074_0026400 3300049590 Bacteria 4212
98 Ga0501080_0032791 3300049742 Bacteria 4845
99 Ga0501083_0061962 3300049744 Bacteria 2497
100 nmdc:mga0qj67_83096_c1 3300050509 Bacteria 2567
101 Ga0500645_050079 3300053730 Bacteria 1220
102 Ga0500587_000508 3300053739 Bacteria 4703

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046512 Ga0495610_0068693 Ga0495610_0068693_820_1638 255
2 3300050509 nmdc:mga0qj67_83096_c1 nmdc:mga0qj67_83096_c1_1659_2498 262
3 3300005364 Ga0070673_100281844 Ga0070673_1002818442 275
4 3300025960 Ga0207651_10247018 Ga0207651_102470181 275
5 3300046558 Ga0495633_0007309 Ga0495633_0007309_1010_1993 286
6 3300053730 Ga0500645_050079 Ga0500645_050079_110_1096 288
7 3300028794 Ga0307515_10000096 Ga0307515_10000096106 289
8 3300049590 Ga0501074_0026400 Ga0501074_0026400_247_1182 294
9 3300049742 Ga0501080_0032791 Ga0501080_0032791_3585_4520 294
10 3300049744 Ga0501083_0061962 Ga0501083_0061962_132_1067 294
11 3300006946 Ga0079104_1000226 Ga0079104_100022638 295
12 3300027111 Ga0209281_1000002 Ga0209281_1000002190 295
13 iso_pu_bacteria 2643221644 2644247725 297
14 iso_pu_bacteria 2643221717 2644646971 297
15 iso_pu_bacteria 2547132374 2548500480 298
16 iso_pu_bacteria 2643221609 2644058277 298
17 iso_pu_bacteria 2643221611 2644073329 298
18 iso_pu_bacteria 2643221660 2644339806 298
19 iso_pu_bacteria 2721755523 2722886338 298
20 iso_pu_bacteria 2816332133 2816469814 298
21 iso_pu_bacteria 2919704043 2919706007 298
22 iso_pu_bacteria 2928115317 2928119997 298
23 iso_pu_bacteria 2932422444 2932422503 298
24 iso_pu_bacteria 2974320154 2974321297 298
25 3300021361 Ga0213872_10000045 Ga0213872_1000004562 300
26 3300039447 Ga0436361_0524686 Ga0436361_0524686_98911_99825 300
27 3300003775 Ga0055524_1000140 Ga0055524_100014044 301
28 3300003792 Ga0055540_1000133 Ga0055540_100013332 301
29 3300005344 Ga0070661_100001690 Ga0070661_10000169011 301
30 3300005457 Ga0070662_100307677 Ga0070662_1003076771 301
31 3300005564 Ga0070664_100000867 Ga0070664_10000086715 301
32 3300006946 Ga0079104_1000053 Ga0079104_100005346 301
33 3300025291 Ga0209675_1015152 Ga0209675_10151522 301
34 3300025298 Ga0209050_1001950 Ga0209050_10019506 301
35 3300025298 Ga0209050_1024766 Ga0209050_10247662 301
36 3300025299 Ga0209256_1000045 Ga0209256_1000045205 301
37 3300025303 Ga0209051_1000004 Ga0209051_1000004999 301
38 3300025304 Ga0209257_1000315 Ga0209257_100031574 301
39 3300025920 Ga0207649_10000614 Ga0207649_1000061419 301
40 3300025945 Ga0207679_10000077 Ga0207679_100000779 301
41 3300027111 Ga0209281_1000147 Ga0209281_100014746 301
42 3300031548 Ga0307408_100000072 Ga0307408_10000007265 301
43 3300031901 Ga0307406_10000122 Ga0307406_1000012210 301
44 3300042125 Ga0450923_004612 Ga0450923_004612_862_1896 301
45 3300042531 Ga0450918_000057 Ga0450918_000057_21199_22152 301
46 3300048917 Ga0496114_0014146 Ga0496114_0014146_3216_4169 301
47 3300003759 Ga0055525_1000054 Ga0055525_1000054101 302
48 3300005262 Ga0065165_1000766 Ga0065165_100076615 302
49 3300005327 Ga0070658_10151019 Ga0070658_101510192 302
50 3300005356 Ga0070674_100111447 Ga0070674_1001114473 302
51 3300005367 Ga0070667_100362663 Ga0070667_1003626632 302
52 3300005456 Ga0070678_100302402 Ga0070678_1003024022 302
53 3300005548 Ga0070665_100008383 Ga0070665_1000083834 302
54 3300005548 Ga0070665_100048081 Ga0070665_1000480815 302
55 3300005841 Ga0068863_100137365 Ga0068863_1001373653 302
56 3300006051 Ga0075364_10103738 Ga0075364_101037382 302
57 3300006353 Ga0075370_10108045 Ga0075370_101080451 302
58 3300009092 Ga0105250_10000883 Ga0105250_1000088311 302
59 3300009148 Ga0105243_10006749 Ga0105243_100067496 302
60 3300009176 Ga0105242_10002644 Ga0105242_1000264411 302
61 3300021361 Ga0213872_10109275 Ga0213872_101092752 302
62 3300025230 Ga0209563_100075 Ga0209563_10007595 302
63 3300025711 Ga0207696_1000950 Ga0207696_10009508 302
64 3300025927 Ga0207687_10011347 Ga0207687_100113474 302
65 3300025934 Ga0207686_10001330 Ga0207686_100013307 302
66 3300025935 Ga0207709_10000151 Ga0207709_1000015159 302
67 3300026088 Ga0207641_10049883 Ga0207641_100498833 302
68 3300026121 Ga0207683_10291877 Ga0207683_102918772 302
69 3300027526 Ga0209968_1000851 Ga0209968_10008514 302
70 3300027695 Ga0209966_1000117 Ga0209966_100011715 302
71 3300028794 Ga0307515_10010282 Ga0307515_1001028212 302
72 3300028794 Ga0307515_10033375 Ga0307515_100333753 302
73 3300028794 Ga0307515_10087418 Ga0307515_100874183 302
74 3300028794 Ga0307515_10107502 Ga0307515_101075023 302
75 3300031238 Ga0265332_10000006 Ga0265332_10000006106 302
76 3300031239 Ga0265328_10006292 Ga0265328_100062923 302
77 3300031239 Ga0265328_10017501 Ga0265328_100175013 302
78 3300031242 Ga0265329_10012048 Ga0265329_100120484 302
79 3300031250 Ga0265331_10020278 Ga0265331_100202783 302
80 3300031251 Ga0265327_10000080 Ga0265327_1000008070 302
81 3300031616 Ga0307508_10000142 Ga0307508_1000014278 302
82 3300031649 Ga0307514_10007646 Ga0307514_100076464 302
83 3300031711 Ga0265314_10000882 Ga0265314_1000088211 302
84 3300031712 Ga0265342_10158206 Ga0265342_101582061 302
85 3300035090 Ga0373949_0025329 Ga0373949_0025329_52_1011 302
86 3300035691 Ga0373931_0074763 Ga0373931_0074763_155_1114 302
87 3300037312 Ga0395899_0011048 Ga0395899_0011048_943_1908 302
88 3300037312 Ga0395899_0347362 Ga0395899_0347362_21_980 302
89 3300037418 Ga0395900_0080997 Ga0395900_0080997_68_1027 302
90 3300037471 Ga0395905_0034752 Ga0395905_0034752_2446_3402 302
91 3300037471 Ga0395905_0113862 Ga0395905_0113862_602_1561 302
92 3300038443 Ga0395901_0049147 Ga0395901_0049147_2310_3269 302
93 3300038443 Ga0395901_0428278 Ga0395901_0428278_205_1173 302
94 3300039450 Ga0436363_0499709 Ga0436363_0499709_784_1752 302
95 3300041408 Ga0439453_0012571 Ga0439453_0012571_59_1018 302
96 3300042439 Ga0439464_0003490 Ga0439464_0003490_671_1630 302
97 3300044656 Ga0466969_0000018 Ga0466969_0000018_35570_36517 302
98 3300044684 Ga0466966_0007237 Ga0466966_0007237_1900_2865 302
99 3300044684 Ga0466966_0025945 Ga0466966_0025945_581_1528 302
100 3300044693 Ga0466961_0025018 Ga0466961_0025018_2171_3118 302
101 3300044712 Ga0453684_0458422 Ga0453684_0458422_59_1054 302
102 3300044719 Ga0466971_0089344 Ga0466971_0089344_100_1047 302
103 3300045051 Ga0451576_0260343 Ga0451576_0260343_24_1019 302
104 3300046501 Ga0495607_0043335 Ga0495607_0043335_1408_2367 302
105 3300046517 Ga0495630_0212693 Ga0495630_0212693_356_1315 302
106 3300046519 Ga0495632_0017040 Ga0495632_0017040_167_1126 302
107 3300046542 Ga0495597_0000250 Ga0495597_0000250_39658_40629 302
108 3300046660 Ga0495625_0000827 Ga0495625_0000827_29703_30662 302
109 3300046660 Ga0495625_0275221 Ga0495625_0275221_95_1054 302
110 3300048925 Ga0496122_0119532 Ga0496122_0119532_102_1079 302
111 3300048926 Ga0496123_0039564 Ga0496123_0039564_1684_2661 302
112 3300048928 Ga0496125_0006417 Ga0496125_0006417_3161_4138 302
113 3300049581 Ga0501047_0139785 Ga0501047_0139785_621_1580 302
114 3300053739 Ga0500587_000508 Ga0500587_000508_3426_4385 302

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02911

Formyl_trans_C

Formyl transferase, C-terminal domain

229

329

0.97

PF00551

Formyl_trans_N

Formyl transferase

119

206

0.96

PF00551

Formyl_trans_N

Formyl transferase

1

110

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.8984 1 294
3r8x-assembly1.cif.gz_A crystal structure of methionyl-trna formyltransferase from yersinia pestis complexed with l-methionine 0.8944 2 295
3tqq-assembly1.cif.gz_A structure of the methionyl-trna formyltransferase (fmt) from coxiella burnetii 0.8894 2 296
3q0i-assembly1.cif.gz_A methionyl-trna formyltransferase from vibrio cholerae 0.8864 1 296
5uai-assembly1.cif.gz_A crystal structure of methionyl-trna formyltransferase from pseudomonas aeruginosa 0.8793 2 294
ID Description Score Start End Superfamily
5uaiB02 Alpha Beta;Roll;Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2;Formyl transferase, C-terminal domain 0.959 214 294 3.10.25.10
3tqqA02 Alpha Beta;Roll;Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2;Formyl transferase, C-terminal domain 0.9001 214 296 3.10.25.10
3rfoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.8918 2 209 3.40.50.170
3rfoC02 Alpha Beta;Roll;Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2;Formyl transferase, C-terminal domain 0.8789 214 302 3.10.25.10
3q0iA02 Alpha Beta;Roll;Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2;Formyl transferase, C-terminal domain 0.8769 214 296 3.10.25.10
ID Description Score Start End GO Terms
AF-A0A7W1RME3-F1-model_v4 deleted 0.9442 1 169
AF-A0A328UYP5-F1-model_v4 deleted 0.9412 1 184
AF-A0A7S2JMX6-F1-model_v4 Formyl transferase N-terminal domain-containing protein 0.9403 86 189 GO:0004479
GO:0005739
AF-A0A3M1CS93-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9401 1 143 GO:0004479
GO:0005829
AF-A0A7W1RME3-F1-model_v4 deleted 0.933 1 169

Feature Viewer

pLDDT pTM Quality
89.94 0.86 High
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Predicted Structure (AlphaFold2)

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