F074694
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 113 | 79 | 226 | 226 |
Family's Representative Sequence
| Representative Sequence | 3300031852|Ga0307410_10107065|Ga0307410_101070652 |
| Length | 259 |
| Sequence | MADSQHPERQEERAPLERRARMHAALGEPVRLLIVDQLVLGDASPGELRALVDLPTNLLAHHLKVLDDAGLIRRVRSEGDRRRSYVQLALDDPAVAALIGAETLAPTAERVVFVCTHNSARSQLAAAAWARTSTVPTASAGTHPADRVHPRAVRVGRRHGLRLADAGTSHVGDVVRTGDLVVAVCDNAHEELPGTALPGLPRLHWSVADPAPADTDDAFETAYDQITERVERLAHAFQPRQPTQADHPARTPARRGATP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 2 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 3 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 7 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 11 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 12 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 13 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 14 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 15 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 17 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 18 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 19 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 27 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 28 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 29 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 30 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 31 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 32 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 33 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 34 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 35 | 3300031889 | Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO | Metagenome | Rhizosphere |
| 36 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 37 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 38 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 39 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 40 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 41 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 42 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 43 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 44 | 3300034957 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 | Metagenome | Rhizosphere |
| 45 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 46 | 3300041491 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG | Metagenome | Unclassified |
| 47 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 48 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 49 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 50 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 51 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 52 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 53 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 54 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 55 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 56 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 57 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 58 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 59 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 60 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 61 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 62 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 63 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 64 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 65 | 3300053159 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere | Metagenome | Endosphere |
| 66 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 67 | 2643221553 | Microbacterium sp. Root553 | Isolate | Unclassified |
| 68 | 2643221724 | Microbacterium sp. Root280D1 | Isolate | Unclassified |
| 69 | 2728369380 | Microbacterium sp. 1.5R | Isolate | Rhizosphere |
| 70 | 2747842429 | Microbacterium sp. WCS2014-259 | Isolate | Unclassified |
| 71 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 72 | 2808606306 | Microbacterium sp. SLBN-146 | Isolate | Unclassified |
| 73 | 2867302475 | Micromonospora globbae WPS1-2 | Isolate | Unclassified |
| 74 | 2946080515 | Microbacterium sp. W4I20 | Isolate | Rhizosphere |
| 75 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 76 | 8003830390 | Micromonospora parastrephiae STR1_7 | Isolate | Rhizosphere |
| 77 | 8003856774 | Micromonospora echinofusca MPMI6 | Isolate | Unclassified |
| 78 | 8055412473 | Micromonospora phytophila DSM 105363 | Isolate | Nodule |
| 79 | 8057345674 | Herbiconiux aconitum CPCC 205763 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.73 |
| Metatranscriptomes | 0 |
| Isolates | 13.27 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.42 |
| Nodule | 0.88 |
| Rhizoplane | 3.54 |
| Rhizosphere | 53.98 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0307410_10107065 | 3300031852 | Bacteria | 2016 |
| 2 | Ga0068869_100098632 | 3300005334 | Bacteria | 2207 |
| 3 | Ga0070668_100014607 | 3300005347 | Bacteria | 5870 |
| 4 | Ga0070668_100048604 | 3300005347 | Bacteria | 3263 |
| 5 | Ga0070669_100204266 | 3300005353 | Bacteria | 1556 |
| 6 | Ga0070667_100257948 | 3300005367 | Bacteria | 1560 |
| 7 | Ga0070679_100456150 | 3300005530 | Bacteria | 1223 |
| 8 | Ga0070684_100564856 | 3300005535 | Bacteria | 1056 |
| 9 | Ga0070684_100956655 | 3300005535 | Bacteria | 803 |
| 10 | Ga0070665_100396362 | 3300005548 | Bacteria | 1388 |
| 11 | Ga0070664_100245497 | 3300005564 | Bacteria | 1608 |
| 12 | Ga0070664_100605617 | 3300005564 | Bacteria | 1016 |
| 13 | Ga0068859_100559164 | 3300005617 | Bacteria | 1238 |
| 14 | Ga0068860_100088747 | 3300005843 | Bacteria | 2943 |
| 15 | Ga0081455_10000184 | 3300005937 | Bacteria | 78912 |
| 16 | Ga0075364_10007187 | 3300006051 | Bacteria | 6593 |
| 17 | Ga0075428_100005845 | 3300006844 | Bacteria | 13669 |
| 18 | Ga0075428_100006513 | 3300006844 | Bacteria | 12985 |
| 19 | Ga0075428_100741785 | 3300006844 | Bacteria | 1045 |
| 20 | Ga0097620_100559135 | 3300006931 | Bacteria | 1238 |
| 21 | Ga0157369_10479712 | 3300013105 | Bacteria | 1287 |
| 22 | Ga0157378_10673517 | 3300013297 | Bacteria | 1052 |
| 23 | Ga0163163_10271963 | 3300014325 | Bacteria | 1745 |
| 24 | Ga0157379_11143832 | 3300014968 | Bacteria | 747 |
| 25 | Ga0207689_10128149 | 3300025942 | Bacteria | 2087 |
| 26 | Ga0207679_10434011 | 3300025945 | Bacteria | 1162 |
| 27 | Ga0207668_10018859 | 3300025972 | Bacteria | 4348 |
| 28 | Ga0207668_10023933 | 3300025972 | Bacteria | 3935 |
| 29 | Ga0207658_10085970 | 3300025986 | Bacteria | 2424 |
| 30 | Ga0207658_10158774 | 3300025986 | Bacteria | 1851 |
| 31 | Ga0207674_10513512 | 3300026116 | Bacteria | 1157 |
| 32 | Ga0268264_10008042 | 3300028381 | Bacteria | 8769 |
| 33 | Ga0307517_10076456 | 3300028786 | Bacteria | 2923 |
| 34 | Ga0307517_10242892 | 3300028786 | Bacteria | 1066 |
| 35 | Ga0307515_10012837 | 3300028794 | Bacteria | 15720 |
| 36 | Ga0307515_10019880 | 3300028794 | Bacteria | 12037 |
| 37 | Ga0307515_10026760 | 3300028794 | Bacteria | 9904 |
| 38 | Ga0307512_10015741 | 3300030522 | Bacteria | 6999 |
| 39 | Ga0307513_10004690 | 3300031456 | Bacteria | 18180 |
| 40 | Ga0307513_10056886 | 3300031456 | Bacteria | 4172 |
| 41 | Ga0307513_10208517 | 3300031456 | Bacteria | 1788 |
| 42 | Ga0307509_10114918 | 3300031507 | Bacteria | 2685 |
| 43 | Ga0307508_10001897 | 3300031616 | Bacteria | 22951 |
| 44 | Ga0307508_10046939 | 3300031616 | Bacteria | 3855 |
| 45 | Ga0307516_10008204 | 3300031730 | Bacteria | 11860 |
| 46 | Ga0307516_10008925 | 3300031730 | Bacteria | 11247 |
| 47 | Ga0307516_10040915 | 3300031730 | Bacteria | 4609 |
| 48 | Ga0307516_10048870 | 3300031730 | Bacteria | 4161 |
| 49 | Ga0307516_10101857 | 3300031730 | Bacteria | 2687 |
| 50 | Ga0307516_10167694 | 3300031730 | Bacteria | 1939 |
| 51 | Ga0307516_10315699 | 3300031730 | Bacteria | 1235 |
| 52 | Ga0307516_10354247 | 3300031730 | Bacteria | 1133 |
| 53 | Ga0307405_10025709 | 3300031731 | Bacteria | 3384 |
| 54 | Ga0307405_10386573 | 3300031731 | Bacteria | 1091 |
| 55 | Ga0307413_10176084 | 3300031824 | Bacteria | 1520 |
| 56 | Ga0307413_10276550 | 3300031824 | Bacteria | 1260 |
| 57 | Ga0307413_10411300 | 3300031824 | Bacteria | 1063 |
| 58 | Ga0326468_10001212 | 3300031889 | Bacteria | 2336 |
| 59 | Ga0307406_10000335 | 3300031901 | Bacteria | 27323 |
| 60 | Ga0307406_10031907 | 3300031901 | Bacteria | 3211 |
| 61 | Ga0307406_10367123 | 3300031901 | Bacteria | 1130 |
| 62 | Ga0307412_10690728 | 3300031911 | Bacteria | 875 |
| 63 | Ga0307416_100008801 | 3300032002 | Bacteria | 6548 |
| 64 | Ga0307416_100903715 | 3300032002 | Bacteria | 983 |
| 65 | Ga0307414_10542670 | 3300032004 | Bacteria | 1035 |
| 66 | Ga0307414_10753978 | 3300032004 | Bacteria | 885 |
| 67 | Ga0307411_10282799 | 3300032005 | Bacteria | 1321 |
| 68 | Ga0307415_100063994 | 3300032126 | Bacteria | 2558 |
| 69 | Ga0307415_100185788 | 3300032126 | Bacteria | 1635 |
| 70 | Ga0307415_100253588 | 3300032126 | Bacteria | 1431 |
| 71 | Ga0307507_10413213 | 3300033179 | Bacteria | 761 |
| 72 | Ga0307510_10130510 | 3300033180 | Bacteria | 2188 |
| 73 | Ga0373938_0020659 | 3300034957 | Bacteria | 1328 |
| 74 | Ga0373942_0024616 | 3300035207 | Bacteria | 1545 |
| 75 | Ga0451833_1377908 | 3300041491 | Bacteria | 916 |
| 76 | Ga0451843_0836441 | 3300041509 | Bacteria | 882 |
| 77 | Ga0451853_3738673 | 3300041512 | Bacteria | 2264 |
| 78 | Ga0495590_0091943 | 3300046457 | Bacteria | 1074 |
| 79 | Ga0495632_0008726 | 3300046519 | Bacteria | 6181 |
| 80 | Ga0495632_0020851 | 3300046519 | Bacteria | 3541 |
| 81 | Ga0495649_0148508 | 3300046694 | Bacteria | 1232 |
| 82 | Ga0496100_0239105 | 3300048903 | Bacteria | 1339 |
| 83 | Ga0496104_0175571 | 3300048907 | Bacteria | 2053 |
| 84 | Ga0496112_0311941 | 3300048915 | Bacteria | 1518 |
| 85 | Ga0496112_0528656 | 3300048915 | Bacteria | 1114 |
| 86 | Ga0496117_0001146 | 3300048920 | Bacteria | 39905 |
| 87 | Ga0496117_0002323 | 3300048920 | Bacteria | 24334 |
| 88 | Ga0496118_0015662 | 3300048921 | Bacteria | 7004 |
| 89 | Ga0496122_0009305 | 3300048925 | Bacteria | 10386 |
| 90 | Ga0496123_0007144 | 3300048926 | Bacteria | 10610 |
| 91 | Ga0496125_0028125 | 3300048928 | Bacteria | 5083 |
| 92 | Ga0496126_0001944 | 3300048929 | Bacteria | 29387 |
| 93 | Ga0496126_0155381 | 3300048929 | Bacteria | 1958 |
| 94 | Ga0501068_0178076 | 3300049584 | Bacteria | 1344 |
| 95 | nmdc:mga00v17_17998_c1 | 3300050491 | Bacteria | 4009 |
| 96 | Ga0500644_0078742 | 3300053088 | Bacteria | 1207 |
| 97 | Ga0500652_039360 | 3300053131 | Bacteria | 1895 |
| 98 | Ga0500630_082809 | 3300053159 | Bacteria | 1498 |
| 99 | 2623589314 | 2622736626 | Bacteria | 7181580 |
| 100 | 2643784974 | 2643221553 | Bacteria | 3544260 |
| 101 | 2644680876 | 2643221724 | Bacteria | 3593515 |
| 102 | 2730230692 | 2728369380 | Bacteria | 3620317 |
| 103 | 2747955462 | 2747842429 | Bacteria | 3914386 |
| 104 | 2772645602 | 2772190715 | Bacteria | 6959372 |
| 105 | 2808630384 | 2808606306 | Bacteria | 3608896 |
| 106 | 2867306882 | 2867302475 | Bacteria | 7087181 |
| 107 | 2867308944 | 2867302475 | Bacteria | 7087181 |
| 108 | 2946083207 | 2946080515 | Bacteria | 4310960 |
| 109 | 2996225316 | 2996221748 | Bacteria | 6799777 |
| 110 | 8003830413 | 8003830390 | Bacteria | 6541657 |
| 111 | 8003859022 | 8003856774 | Bacteria | 7675274 |
| 112 | 8055416869 | 8055412473 | Bacteria | 6257500 |
| 113 | 8057346789 | 8057345674 | Bacteria | 4160394 |
| 114 | Ga0307410_10107065 | |||
| 115 | Ga0068869_100098632 | |||
| 116 | Ga0070668_100014607 | |||
| 117 | Ga0070668_100048604 | |||
| 118 | Ga0070669_100204266 | |||
| 119 | Ga0070667_100257948 | |||
| 120 | Ga0070679_100456150 | |||
| 121 | Ga0070684_100564856 | |||
| 122 | Ga0070684_100956655 | |||
| 123 | Ga0070665_100396362 | |||
| 124 | Ga0070664_100245497 | |||
| 125 | Ga0070664_100605617 | |||
| 126 | Ga0068859_100559164 | |||
| 127 | Ga0068860_100088747 | |||
| 128 | Ga0081455_10000184 | |||
| 129 | Ga0075364_10007187 | |||
| 130 | Ga0075428_100005845 | |||
| 131 | Ga0075428_100006513 | |||
| 132 | Ga0075428_100741785 | |||
| 133 | Ga0097620_100559135 | |||
| 134 | Ga0157369_10479712 | |||
| 135 | Ga0157378_10673517 | |||
| 136 | Ga0163163_10271963 | |||
| 137 | Ga0157379_11143832 | |||
| 138 | Ga0207689_10128149 | |||
| 139 | Ga0207679_10434011 | |||
| 140 | Ga0207668_10018859 | |||
| 141 | Ga0207668_10023933 | |||
| 142 | Ga0207658_10085970 | |||
| 143 | Ga0207658_10158774 | |||
| 144 | Ga0207674_10513512 | |||
| 145 | Ga0268264_10008042 | |||
| 146 | Ga0307517_10076456 | |||
| 147 | Ga0307517_10242892 | |||
| 148 | Ga0307515_10012837 | |||
| 149 | Ga0307515_10019880 | |||
| 150 | Ga0307515_10026760 | |||
| 151 | Ga0307512_10015741 | |||
| 152 | Ga0307513_10004690 | |||
| 153 | Ga0307513_10056886 | |||
| 154 | Ga0307513_10208517 | |||
| 155 | Ga0307509_10114918 | |||
| 156 | Ga0307508_10001897 | |||
| 157 | Ga0307508_10046939 | |||
| 158 | Ga0307516_10008204 | |||
| 159 | Ga0307516_10008925 | |||
| 160 | Ga0307516_10040915 | |||
| 161 | Ga0307516_10048870 | |||
| 162 | Ga0307516_10101857 | |||
| 163 | Ga0307516_10167694 | |||
| 164 | Ga0307516_10315699 | |||
| 165 | Ga0307516_10354247 | |||
| 166 | Ga0307405_10025709 | |||
| 167 | Ga0307405_10386573 | |||
| 168 | Ga0307413_10176084 | |||
| 169 | Ga0307413_10276550 | |||
| 170 | Ga0307413_10411300 | |||
| 171 | Ga0326468_10001212 | |||
| 172 | Ga0307406_10000335 | |||
| 173 | Ga0307406_10031907 | |||
| 174 | Ga0307406_10367123 | |||
| 175 | Ga0307412_10690728 | |||
| 176 | Ga0307416_100008801 | |||
| 177 | Ga0307416_100903715 | |||
| 178 | Ga0307414_10542670 | |||
| 179 | Ga0307414_10753978 | |||
| 180 | Ga0307411_10282799 | |||
| 181 | Ga0307415_100063994 | |||
| 182 | Ga0307415_100185788 | |||
| 183 | Ga0307415_100253588 | |||
| 184 | Ga0307507_10413213 | |||
| 185 | Ga0307510_10130510 | |||
| 186 | Ga0373938_0020659 | |||
| 187 | Ga0373942_0024616 | |||
| 188 | Ga0451833_1377908 | |||
| 189 | Ga0451843_0836441 | |||
| 190 | Ga0451853_3738673 | |||
| 191 | Ga0495590_0091943 | |||
| 192 | Ga0495632_0008726 | |||
| 193 | Ga0495632_0020851 | |||
| 194 | Ga0495649_0148508 | |||
| 195 | Ga0496100_0239105 | |||
| 196 | Ga0496104_0175571 | |||
| 197 | Ga0496112_0311941 | |||
| 198 | Ga0496112_0528656 | |||
| 199 | Ga0496117_0001146 | |||
| 200 | Ga0496117_0002323 | |||
| 201 | Ga0496118_0015662 | |||
| 202 | Ga0496122_0009305 | |||
| 203 | Ga0496123_0007144 | |||
| 204 | Ga0496125_0028125 | |||
| 205 | Ga0496126_0001944 | |||
| 206 | Ga0496126_0155381 | |||
| 207 | Ga0501068_0178076 | |||
| 208 | nmdc:mga00v17_17998_c1 | |||
| 209 | Ga0500644_0078742 | |||
| 210 | Ga0500652_039360 | |||
| 211 | Ga0500630_082809 | |||
| 212 | 2623589314 | |||
| 213 | 2643784974 | |||
| 214 | 2644680876 | |||
| 215 | 2730230692 | |||
| 216 | 2747955462 | |||
| 217 | 2772645602 | |||
| 218 | 2808630384 | |||
| 219 | 2867306882 | |||
| 220 | 2867308944 | |||
| 221 | 2946083207 | |||
| 222 | 2996225316 | |||
| 223 | 8003830413 | |||
| 224 | 8003859022 | |||
| 225 | 8055416869 | |||
| 226 | 8057346789 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5jlu-assembly1.cif.gz_A-2 | crystal structure of adhesin competence repressor (adcr) from streptococcus pyogenes | 0.9384 | 27 | 98 |
| 1r1u-assembly1.cif.gz_B | crystal structure of the metal-sensing transcriptional repressor czra from staphylococcus aureus in the apo-form | 0.9293 | 15 | 99 |
| 4ooi-assembly1.cif.gz_B | reduced hlyu from vibrio cholerae n16961 | 0.9273 | 13 | 98 |
| 5yhz-assembly1.cif.gz_A-2 | structure of lactococcus lactis zitr, e41a mutant | 0.9272 | 28 | 99 |
| 6cda-assembly1.cif.gz_A-2 | crystal structure of l34a czra in the zn(ii)bound state | 0.9174 | 11 | 99 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q58793_322_389_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9452 | 25 | 90 | 1.10.10.10 |
| af_Q69XJ1_51_114_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9419 | 42 | 86 | 1.10.10.10 |
| af_P32910_88_152_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9286 | 29 | 87 | 1.10.10.10 |
| af_Q57824_147_206_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9271 | 27 | 86 | 1.10.10.10 |
| af_Q57682_5_95_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9156 | 19 | 87 | 1.10.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7W9LM67-F1-model_v4 | Protein-tyrosine-phosphatase | 0.9774 | 107 | 231 |
GO:0046685
|
| AF-A0A7W0P1F4-F1-model_v4 | Winged helix-turn-helix transcriptional regulator | 0.9677 | 18 | 90 |
GO:0003700
|
| AF-A0A7X9L7X8-F1-model_v4 | ArsR family transcriptional regulator | 0.9673 | 107 | 232 |
GO:0046685
|
| AF-A0A2N9JD98-F1-model_v4 | ArsR family transcriptional regulator | 0.9609 | 15 | 231 |
GO:0003700
GO:0046685 |
| AF-A0A538FT30-F1-model_v4 | Winged helix-turn-helix transcriptional regulator | 0.9605 | 15 | 90 |
GO:0003700
|