F066212
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 111 | 26 | 110 | 453 |
Family's Representative Sequence
| Representative Sequence | 3300049776|Ga0501280_000440|Ga0501280_000440_2845_4251 |
| Length | 468 |
| Sequence | MSTAHVLLVDDEAVAREGLATALRRDGLDVTTADNGDAALALLRQNDYEVLLTDVKMPGMDGLELLRRAREAWPAMEVLVVTGFATTESAVEAMRTGAFYYVSKPFRLGEVRKLVREAADKAQLRAENQRLRQLVEHAADERIITRDEGMRAILDIARGVAPTDCNVLIVGETGTGKELLARHVHAHSRRASGPFVAINCGALNEELLANELFGHEKGAYTGAQQSRGGLVEAAQGGTLFLDEVTEMSAAMQVKLLRLLQEREYLRVGGTEPVRADVRFLAATNREPRAAVEAGQFRQDIYFRLNVVTLQLPPLRDRRDDIPLLAQQFVRRAAQAMGKKVTAIAPPAMQKLCAYDYPGNVRELENIIERGVALAGGTMLAEEDLPPGLGTPAGHAAGRGGNEVRTLEAVERNHILDVLAGVGGNRALAARLLGIDRVSLWRKLRRYEEQGLIEADEADGALRVRDVPA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2523533628 | Maridesulfovibrio zosterae DSM 11974 | Isolate | Rhizosphere |
| 2 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 3 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 4 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 5 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 6 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 7 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 8 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 9 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 10 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 11 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 12 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 13 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 14 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 15 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 16 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 17 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 18 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 19 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 20 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 21 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 22 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 23 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 24 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 25 | 3300049776 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought | Metagenome | Rhizosphere |
| 26 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.3 |
| Metatranscriptomes | 1.8 |
| Isolates | 0.9 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 50.45 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 49.55 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0316579_10021982 | 3300031691 | Bacteria | 2849 |
| 2 | Ga0316579_10035044 | 3300031691 | Bacteria | 2312 |
| 3 | Ga0316576_10001424 | 3300031727 | Bacteria | 12814 |
| 4 | Ga0316576_10001972 | 3300031727 | Bacteria | 11473 |
| 5 | Ga0316578_10050315 | 3300031728 | Bacteria | 2438 |
| 6 | Ga0316578_10084981 | 3300031728 | Bacteria | 1886 |
| 7 | Ga0316577_10008840 | 3300031733 | Bacteria | 5404 |
| 8 | Ga0316593_10014137 | 3300032168 | Bacteria | 2375 |
| 9 | Ga0316593_10033974 | 3300032168 | Bacteria | 1672 |
| 10 | Ga0316574_0048625 | 3300035398 | Bacteria | 2635 |
| 11 | Ga0316574_0075226 | 3300035398 | Bacteria | 2138 |
| 12 | Ga0316582_0092884 | 3300036647 | Bacteria | 1989 |
| 13 | Ga0316584_0030952 | 3300036712 | Bacteria | 3956 |
| 14 | Ga0316584_0045543 | 3300036712 | Bacteria | 3275 |
| 15 | Ga0316584_0211537 | 3300036712 | Bacteria | 1427 |
| 16 | Ga0400484_08082 | 3300038725 | Bacteria | 14574 |
| 17 | Ga0400484_13017 | 3300038725 | Bacteria | 4006 |
| 18 | Ga0400484_18694 | 3300038725 | Bacteria | 5983 |
| 19 | Ga0400484_26363 | 3300038725 | Bacteria | 17653 |
| 20 | Ga0400484_35563 | 3300038725 | Bacteria | 15880 |
| 21 | Ga0400484_43841 | 3300038725 | Bacteria | 3701 |
| 22 | Ga0400490_02909 | 3300038726 | Bacteria | 25573 |
| 23 | Ga0400490_20592 | 3300038726 | Bacteria | 6304 |
| 24 | Ga0400490_28539 | 3300038726 | Bacteria | 19290 |
| 25 | Ga0400490_36327 | 3300038726 | Bacteria | 27463 |
| 26 | Ga0400490_49686 | 3300038726 | Bacteria | 13302 |
| 27 | Ga0400490_51996 | 3300038726 | Bacteria | 58086 |
| 28 | Ga0400490_55741 | 3300038726 | Bacteria | 49915 |
| 29 | Ga0400490_55983 | 3300038726 | Bacteria | 22854 |
| 30 | Ga0400491_06669 | 3300038727 | Bacteria | 1813 |
| 31 | Ga0400485_09825 | 3300038735 | Bacteria | 56959 |
| 32 | Ga0400485_13341 | 3300038735 | Bacteria | 4295 |
| 33 | Ga0400488_02705 | 3300038741 | Bacteria | 3287 |
| 34 | Ga0400488_13882 | 3300038741 | Bacteria | 2943 |
| 35 | Ga0400488_21101 | 3300038741 | Bacteria | 3055 |
| 36 | Ga0400488_23425 | 3300038741 | Bacteria | 4157 |
| 37 | Ga0400488_34921 | 3300038741 | Bacteria | 1717 |
| 38 | Ga0400488_38930 | 3300038741 | Bacteria | 9976 |
| 39 | Ga0400488_39067 | 3300038741 | Bacteria | 2821 |
| 40 | Ga0400488_43847 | 3300038741 | Bacteria | 14232 |
| 41 | Ga0400488_44468 | 3300038741 | Bacteria | 9097 |
| 42 | Ga0400486_06134 | 3300038742 | Bacteria | 91302 |
| 43 | Ga0400486_11886 | 3300038742 | Bacteria | 4001 |
| 44 | Ga0400486_12823 | 3300038742 | Bacteria | 2674 |
| 45 | Ga0400486_16183 | 3300038742 | Bacteria | 4839 |
| 46 | Ga0400483_045878 | 3300039062 | Bacteria | 3021 |
| 47 | Ga0400483_054258 | 3300039062 | Bacteria | 7309 |
| 48 | Ga0400483_055958 | 3300039062 | Bacteria | 11386 |
| 49 | Ga0400483_056290 | 3300039062 | Bacteria | 5032 |
| 50 | Ga0400483_072429 | 3300039062 | Bacteria | 26834 |
| 51 | Ga0400483_082837 | 3300039062 | Bacteria | 1425 |
| 52 | Ga0400483_099421 | 3300039062 | Bacteria | 18441 |
| 53 | Ga0400483_127048 | 3300039062 | Bacteria | 5671 |
| 54 | Ga0400483_132768 | 3300039062 | Bacteria | 4853 |
| 55 | Ga0400483_168517 | 3300039062 | Bacteria | 7079 |
| 56 | Ga0400483_179810 | 3300039062 | Bacteria | 1759 |
| 57 | Ga0400483_193944 | 3300039062 | Bacteria | 8440 |
| 58 | Ga0400483_226452 | 3300039062 | Bacteria | 11873 |
| 59 | Ga0400483_228446 | 3300039062 | Bacteria | 67516 |
| 60 | Ga0400483_238786 | 3300039062 | Bacteria | 9913 |
| 61 | Ga0400489_57499 | 3300039093 | Bacteria | 5014 |
| 62 | Ga0400489_77337 | 3300039093 | Bacteria | 9854 |
| 63 | Ga0400489_91097 | 3300039093 | Bacteria | 1964 |
| 64 | Ga0400487_00602 | 3300039110 | Bacteria | 24280 |
| 65 | Ga0400487_04121 | 3300039110 | Bacteria | 52000 |
| 66 | Ga0400487_04799 | 3300039110 | Bacteria | 24963 |
| 67 | Ga0400487_06390 | 3300039110 | Bacteria | 8188 |
| 68 | Ga0400487_21160 | 3300039110 | Bacteria | 31997 |
| 69 | Ga0400487_46577 | 3300039110 | Bacteria | 2349 |
| 70 | Ga0400487_62120 | 3300039110 | Bacteria | 3300 |
| 71 | Ga0451577_0000002 | 3300042876 | Bacteria | 1731375 |
| 72 | Ga0451577_0000138 | 3300042876 | Bacteria | 161887 |
| 73 | Ga0451577_0004010 | 3300042876 | Bacteria | 15834 |
| 74 | Ga0451577_0004774 | 3300042876 | Bacteria | 14179 |
| 75 | Ga0451577_0010548 | 3300042876 | Bacteria | 8812 |
| 76 | Ga0451577_0025156 | 3300042876 | Bacteria | 5404 |
| 77 | Ga0451577_0188688 | 3300042876 | Bacteria | 1859 |
| 78 | Ga0451577_0208743 | 3300042876 | Bacteria | 1764 |
| 79 | Ga0453683_0000013 | 3300044673 | Bacteria | 371932 |
| 80 | Ga0453683_0000602 | 3300044673 | Bacteria | 39576 |
| 81 | Ga0453683_0101993 | 3300044673 | Bacteria | 1802 |
| 82 | Ga0453684_0000002 | 3300044712 | Bacteria | 1731375 |
| 83 | Ga0453684_0000195 | 3300044712 | Bacteria | 265496 |
| 84 | Ga0453684_0000466 | 3300044712 | Bacteria | 161109 |
| 85 | Ga0453684_0000975 | 3300044712 | Bacteria | 94109 |
| 86 | Ga0453684_0001071 | 3300044712 | Bacteria | 87144 |
| 87 | Ga0453684_0002214 | 3300044712 | Bacteria | 48332 |
| 88 | Ga0453684_0002435 | 3300044712 | Bacteria | 45259 |
| 89 | Ga0453684_0008835 | 3300044712 | Bacteria | 17867 |
| 90 | Ga0453684_0012176 | 3300044712 | Bacteria | 14264 |
| 91 | Ga0453684_0018631 | 3300044712 | Bacteria | 10639 |
| 92 | Ga0453684_0020690 | 3300044712 | Bacteria | 9901 |
| 93 | Ga0453684_0024770 | 3300044712 | Bacteria | 8747 |
| 94 | Ga0453684_0039854 | 3300044712 | Bacteria | 6391 |
| 95 | Ga0453684_0332717 | 3300044712 | Bacteria | 1717 |
| 96 | Ga0453684_0398474 | 3300044712 | Bacteria | 1542 |
| 97 | Ga0451576_0000037 | 3300045051 | Bacteria | 372173 |
| 98 | Ga0451576_0000816 | 3300045051 | Bacteria | 60979 |
| 99 | Ga0451576_0003040 | 3300045051 | Bacteria | 23640 |
| 100 | Ga0451576_0004022 | 3300045051 | Bacteria | 19552 |
| 101 | Ga0451576_0009149 | 3300045051 | Bacteria | 11511 |
| 102 | Ga0451576_0017519 | 3300045051 | Bacteria | 7874 |
| 103 | Ga0451576_0024130 | 3300045051 | Bacteria | 6571 |
| 104 | Ga0451576_0049834 | 3300045051 | Bacteria | 4395 |
| 105 | Ga0451576_0055040 | 3300045051 | Bacteria | 4164 |
| 106 | Ga0451576_0065390 | 3300045051 | Bacteria | 3787 |
| 107 | Ga0501036_0083385 | 3300049572 | Bacteria | 2702 |
| 108 | Ga0501076_0046214 | 3300049592 | Bacteria | 3440 |
| 109 | Ga0501280_000440 | 3300049776 | Bacteria | 9938 |
| 110 | Ga0501082_0048756 | 3300060353 | Bacteria | 3651 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300036712 | Ga0316584_0211537 | Ga0316584_0211537_217_1410 | 391 |
| 2 | 3300044712 | Ga0453684_0398474 | Ga0453684_0398474_15_1199 | 394 |
| 3 | 3300042876 | Ga0451577_0004774 | Ga0451577_0004774_10614_11906 | 408 |
| 4 | 3300044712 | Ga0453684_0020690 | Ga0453684_0020690_2275_3567 | 408 |
| 5 | 3300045051 | Ga0451576_0017519 | Ga0451576_0017519_4920_6212 | 408 |
| 6 | 3300044712 | Ga0453684_0001071 | Ga0453684_0001071_14237_15592 | 409 |
| 7 | 3300045051 | Ga0451576_0065390 | Ga0451576_0065390_1714_3087 | 429 |
| 8 | 3300045051 | Ga0451576_0024130 | Ga0451576_0024130_2571_3953 | 442 |
| 9 | iso_pu_bacteria | 2523533628 | 2524003149 | 443 |
| 10 | 3300038727 | Ga0400491_06669 | Ga0400491_06669_82_1419 | 445 |
| 11 | 3300045051 | Ga0451576_0055040 | Ga0451576_0055040_2117_3466 | 445 |
| 12 | 3300039062 | Ga0400483_082837 | Ga0400483_082837_13_1392 | 446 |
| 13 | 3300042876 | Ga0451577_0208743 | Ga0451577_0208743_197_1633 | 446 |
| 14 | 3300038726 | Ga0400490_51996 | Ga0400490_51996_3635_4984 | 447 |
| 15 | 3300044712 | Ga0453684_0000195 | Ga0453684_0000195_174612_175970 | 448 |
| 16 | 3300045051 | Ga0451576_0003040 | Ga0451576_0003040_4360_5718 | 448 |
| 17 | 3300039093 | Ga0400489_57499 | Ga0400489_57499_155_1510 | 449 |
| 18 | 3300044712 | Ga0453684_0002214 | Ga0453684_0002214_9797_11155 | 449 |
| 19 | 3300044712 | Ga0453684_0002435 | Ga0453684_0002435_4410_5795 | 449 |
| 20 | 3300044712 | Ga0453684_0039854 | Ga0453684_0039854_1620_2972 | 449 |
| 21 | 3300044712 | Ga0453684_0332717 | Ga0453684_0332717_267_1619 | 449 |
| 22 | 3300032168 | Ga0316593_10014137 | Ga0316593_100141371 | 450 |
| 23 | 3300038725 | Ga0400484_08082 | Ga0400484_08082_11044_12411 | 450 |
| 24 | 3300038725 | Ga0400484_26363 | Ga0400484_26363_6644_8011 | 450 |
| 25 | 3300038725 | Ga0400484_43841 | Ga0400484_43841_2083_3450 | 450 |
| 26 | 3300038726 | Ga0400490_28539 | Ga0400490_28539_4517_5884 | 450 |
| 27 | 3300038741 | Ga0400488_21101 | Ga0400488_21101_343_1710 | 450 |
| 28 | 3300042876 | Ga0451577_0000138 | Ga0451577_0000138_64402_65757 | 450 |
| 29 | 3300042876 | Ga0451577_0004010 | Ga0451577_0004010_2399_3757 | 450 |
| 30 | 3300042876 | Ga0451577_0010548 | Ga0451577_0010548_6673_8037 | 450 |
| 31 | 3300044673 | Ga0453683_0101993 | Ga0453683_0101993_382_1746 | 450 |
| 32 | 3300044712 | Ga0453684_0000466 | Ga0453684_0000466_95353_96708 | 450 |
| 33 | 3300044712 | Ga0453684_0012176 | Ga0453684_0012176_7882_9240 | 450 |
| 34 | 3300044712 | Ga0453684_0018631 | Ga0453684_0018631_3770_5128 | 450 |
| 35 | 3300044712 | Ga0453684_0024770 | Ga0453684_0024770_5979_7343 | 450 |
| 36 | 3300045051 | Ga0451576_0000816 | Ga0451576_0000816_57271_58626 | 450 |
| 37 | 3300045051 | Ga0451576_0004022 | Ga0451576_0004022_8246_9610 | 450 |
| 38 | 3300031691 | Ga0316579_10035044 | Ga0316579_100350442 | 451 |
| 39 | 3300031727 | Ga0316576_10001424 | Ga0316576_100014244 | 451 |
| 40 | 3300031728 | Ga0316578_10050315 | Ga0316578_100503152 | 451 |
| 41 | 3300031728 | Ga0316578_10084981 | Ga0316578_100849812 | 451 |
| 42 | 3300038741 | Ga0400488_39067 | Ga0400488_39067_1094_2476 | 451 |
| 43 | 3300039110 | Ga0400487_00602 | Ga0400487_00602_7630_9006 | 451 |
| 44 | 3300042876 | Ga0451577_0000002 | Ga0451577_0000002_1603682_1605040 | 451 |
| 45 | 3300044673 | Ga0453683_0000013 | Ga0453683_0000013_244239_245597 | 451 |
| 46 | 3300044673 | Ga0453683_0000602 | Ga0453683_0000602_9409_10770 | 451 |
| 47 | 3300044712 | Ga0453684_0000002 | Ga0453684_0000002_126336_127694 | 451 |
| 48 | 3300045051 | Ga0451576_0000037 | Ga0451576_0000037_244480_245838 | 451 |
| 49 | 3300039062 | Ga0400483_228446 | Ga0400483_228446_26454_27833 | 452 |
| 50 | 3300042876 | Ga0451577_0025156 | Ga0451577_0025156_3927_5288 | 452 |
| 51 | 3300042876 | Ga0451577_0188688 | Ga0451577_0188688_459_1826 | 452 |
| 52 | 3300044712 | Ga0453684_0000975 | Ga0453684_0000975_25668_27029 | 452 |
| 53 | 3300044712 | Ga0453684_0008835 | Ga0453684_0008835_2089_3450 | 452 |
| 54 | 3300045051 | Ga0451576_0009149 | Ga0451576_0009149_4818_6188 | 452 |
| 55 | 3300045051 | Ga0451576_0049834 | Ga0451576_0049834_1508_2866 | 452 |
| 56 | 3300049572 | Ga0501036_0083385 | Ga0501036_0083385_581_1960 | 452 |
| 57 | 3300049592 | Ga0501076_0046214 | Ga0501076_0046214_1651_3030 | 452 |
| 58 | 3300049776 | Ga0501280_000440 | Ga0501280_000440_2845_4251 | 452 |
| 59 | 3300060353 | Ga0501082_0048756 | Ga0501082_0048756_227_1606 | 452 |
| 60 | 3300031691 | Ga0316579_10021982 | Ga0316579_100219822 | 453 |
| 61 | 3300031727 | Ga0316576_10001972 | Ga0316576_100019727 | 453 |
| 62 | 3300031733 | Ga0316577_10008840 | Ga0316577_100088405 | 453 |
| 63 | 3300032168 | Ga0316593_10033974 | Ga0316593_100339741 | 453 |
| 64 | 3300035398 | Ga0316574_0048625 | Ga0316574_0048625_132_1505 | 453 |
| 65 | 3300035398 | Ga0316574_0075226 | Ga0316574_0075226_577_1938 | 453 |
| 66 | 3300036647 | Ga0316582_0092884 | Ga0316582_0092884_464_1825 | 453 |
| 67 | 3300036712 | Ga0316584_0030952 | Ga0316584_0030952_742_2103 | 453 |
| 68 | 3300036712 | Ga0316584_0045543 | Ga0316584_0045543_908_2281 | 453 |
| 69 | 3300038725 | Ga0400484_13017 | Ga0400484_13017_1810_3207 | 453 |
| 70 | 3300038725 | Ga0400484_18694 | Ga0400484_18694_4101_5483 | 453 |
| 71 | 3300038725 | Ga0400484_35563 | Ga0400484_35563_9998_11392 | 453 |
| 72 | 3300038726 | Ga0400490_02909 | Ga0400490_02909_19744_21138 | 453 |
| 73 | 3300038726 | Ga0400490_20592 | Ga0400490_20592_3036_4412 | 453 |
| 74 | 3300038726 | Ga0400490_36327 | Ga0400490_36327_14078_15460 | 453 |
| 75 | 3300038726 | Ga0400490_49686 | Ga0400490_49686_9223_10587 | 453 |
| 76 | 3300038726 | Ga0400490_55741 | Ga0400490_55741_6012_7406 | 453 |
| 77 | 3300038726 | Ga0400490_55983 | Ga0400490_55983_18877_20271 | 453 |
| 78 | 3300038735 | Ga0400485_09825 | Ga0400485_09825_17401_18765 | 453 |
| 79 | 3300038735 | Ga0400485_13341 | Ga0400485_13341_1628_3028 | 453 |
| 80 | 3300038741 | Ga0400488_02705 | Ga0400488_02705_1220_2608 | 453 |
| 81 | 3300038741 | Ga0400488_13882 | Ga0400488_13882_690_2072 | 453 |
| 82 | 3300038741 | Ga0400488_23425 | Ga0400488_23425_1034_2401 | 453 |
| 83 | 3300038741 | Ga0400488_34921 | Ga0400488_34921_319_1701 | 453 |
| 84 | 3300038741 | Ga0400488_38930 | Ga0400488_38930_1551_2915 | 453 |
| 85 | 3300038741 | Ga0400488_43847 | Ga0400488_43847_2344_3726 | 453 |
| 86 | 3300038741 | Ga0400488_44468 | Ga0400488_44468_1872_3266 | 453 |
| 87 | 3300038742 | Ga0400486_06134 | Ga0400486_06134_72679_74043 | 453 |
| 88 | 3300038742 | Ga0400486_11886 | Ga0400486_11886_2464_3840 | 453 |
| 89 | 3300038742 | Ga0400486_12823 | Ga0400486_12823_611_1978 | 453 |
| 90 | 3300038742 | Ga0400486_16183 | Ga0400486_16183_3193_4593 | 453 |
| 91 | 3300039062 | Ga0400483_045878 | Ga0400483_045878_1265_2656 | 453 |
| 92 | 3300039062 | Ga0400483_054258 | Ga0400483_054258_176_1558 | 453 |
| 93 | 3300039062 | Ga0400483_055958 | Ga0400483_055958_5692_7068 | 453 |
| 94 | 3300039062 | Ga0400483_056290 | Ga0400483_056290_669_2036 | 453 |
| 95 | 3300039062 | Ga0400483_072429 | Ga0400483_072429_16850_18226 | 453 |
| 96 | 3300039062 | Ga0400483_099421 | Ga0400483_099421_6397_7779 | 453 |
| 97 | 3300039062 | Ga0400483_127048 | Ga0400483_127048_2812_4191 | 453 |
| 98 | 3300039062 | Ga0400483_132768 | Ga0400483_132768_677_2074 | 453 |
| 99 | 3300039062 | Ga0400483_168517 | Ga0400483_168517_1770_3170 | 453 |
| 100 | 3300039062 | Ga0400483_179810 | Ga0400483_179810_45_1433 | 453 |
| 101 | 3300039062 | Ga0400483_193944 | Ga0400483_193944_3685_5076 | 453 |
| 102 | 3300039062 | Ga0400483_226452 | Ga0400483_226452_10299_11681 | 453 |
| 103 | 3300039062 | Ga0400483_238786 | Ga0400483_238786_789_2165 | 453 |
| 104 | 3300039093 | Ga0400489_77337 | Ga0400489_77337_1974_3374 | 453 |
| 105 | 3300039093 | Ga0400489_91097 | Ga0400489_91097_150_1514 | 453 |
| 106 | 3300039110 | Ga0400487_04121 | Ga0400487_04121_37251_38615 | 453 |
| 107 | 3300039110 | Ga0400487_04799 | Ga0400487_04799_9105_10499 | 453 |
| 108 | 3300039110 | Ga0400487_06390 | Ga0400487_06390_2245_3627 | 453 |
| 109 | 3300039110 | Ga0400487_21160 | Ga0400487_21160_28829_30193 | 453 |
| 110 | 3300039110 | Ga0400487_46577 | Ga0400487_46577_755_2137 | 453 |
| 111 | 3300039110 | Ga0400487_62120 | Ga0400487_62120_1624_3024 | 453 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4bs1-assembly1.cif.gz_A-1 | mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition | 0.9753 | 318 | 385 |
| 1zy2-assembly1.cif.gz_B | crystal structure of the phosphorylated receiver domain of the transcription regulator ntrc1 from aquifex aeolicus | 0.969 | 5 | 127 |
| 7w9h-assembly1.cif.gz_A | crystal structure of the receiver domain of the transcription regulator fler from pseudomonas aeruginosa | 0.9638 | 3 | 117 |
| 8fk2-assembly1.cif.gz_B | the n-terminal vicr from streptococcus mutans | 0.9627 | 3 | 121 |
| 6luf-assembly4.cif.gz_D | trans-acting mutant y290a of the central aaa+ domain of the flagellar regulatory protein flrc | 0.9618 | 144 | 386 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q06065_316_382_1.10.8.60 | Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; | 1 | 315 | 381 | 1.10.8.60 |
| af_Q06065_316_382_1.10.8.60 | Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; | 0.9855 | 315 | 381 | 1.10.8.60 |
| 5m7nA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9849 | 143 | 312 | 3.40.50.300 |
| 4l5eA00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9838 | 405 | 448 | 1.10.10.60 |
| af_P07604_193_369_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.983 | 143 | 314 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A5C6DIN4-F1-model_v4 | Transcriptional regulatory protein tctD | 0.9766 | 1 | 76 |
GO:0000160
|
| AF-A0A845MF59-F1-model_v4 | Response regulator | 0.9726 | 3 | 117 |
GO:0000160
|
| AF-A0A3C1A3X5-F1-model_v4 | DNA-binding response regulator | 0.9718 | 5 | 118 |
GO:0000156
GO:0000976 GO:0005829 GO:0006355 GO:0032993 |
| AF-A0A415TIR1-F1-model_v4 | deleted | 0.9712 | 3 | 122 |
|
| AF-L2EI12-F1-model_v4 | deleted | 0.9696 | 3 | 123 |
|
Predicted Structure (AlphaFold2)
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