F065288

General Info

Members Datasets Scaffolds Average Seq Length
111 82 91 606

Family's Representative Sequence

Representative Sequence 3300041460|Ga0451802_0799475|Ga0451802_0799475_17_2011
Length 664
Sequence MRLWNARSGRKRSDPLEFGGWTRLMPLIAATLLENPMRKTLIACALVLALGACDRAAAPDTAATGNAPAATVSQADIAAETERLNQWFEKKYEEQLRFSPLQLTFQGRKELYDQLDDMSEKSQIDQVAWQKASVEEMEKTFDYAKLSDEGKFSYDLWKLQYEDANAGLPFLADGYSFDQMNGAQSFLPTVLISFHKVDEESDYTAYVSRLKATARAFDQLLERARKSAGQGIRPPKFAYEGVIDQSRKVIAGAPFSAGKDSAIWADAQAKADALVKSGKIDAARAAALKEDARKALLEQFKPAYERVIAWCEEDLPKAAVDATGVGVTHPNGKAYYEYRLRLMTTTDMTAEQIHALGLKEVERIKGEMTALKDKFGFKGDLNAFFAFIDSDPQFNFPNTDAGRQAYIDEATRVIANIKKELPNYFGLLPKADLVVKRVEAFREQDGAAQHYYPGTPDGSRPGVYYAHLSDMSAMPKPELEVIAYHEGLPGHHMQISIAQELTGVPKFRTQAGFTAYQEGWGLYSEWLAKEMPNTYQDPYSEFGRLSSEMWRAIRLVVDTGLHAKGWTEEQAIKYFDDNSAVPLAAIRSEVRRYLIMPGQATAYKIGMIRIQELRRKAETELGDKFDIKGFHDTVLGGGALPLTLLEKRVTQWIASRKEETAAAK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
3 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
4 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
5 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
6 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
7 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
8 2690315857 Rheinheimera sp. EpRS3 Isolate Unclassified
9 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
10 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
11 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
12 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
13 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
14 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
15 2919513703 Luteimonas sp. 3794 Isolate Unclassified
16 2919534386 Rheinheimera pacifica 3879 Isolate Unclassified
17 2919675420 Luteimonas terrae 4099 Isolate Unclassified
18 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
19 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
20 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
21 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
22 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
25 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
35 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
39 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
45 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
46 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
47 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
48 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
49 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
50 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
51 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
52 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
53 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
54 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
55 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
56 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
57 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
58 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
59 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
60 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
61 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
62 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
68 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
69 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
70 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
71 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
72 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
73 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
74 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
77 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
78 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
79 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
80 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
81 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
82 8054357960 Idiomarina rhizosphaerae M1R2S28 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.98
Metatranscriptomes 0
Isolates 18.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.83
Nodule 0
Rhizoplane 2.7
Rhizosphere 53.15
Stem 0
Stem Tuber 0
Unclassified 15.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1192991 2162886007 Bacteria 10770
2 Ga0055536_1000566 3300003781 Bacteria 25281
3 Ga0055536_1003518 3300003781 Bacteria 8388
4 Ga0055530_10000310 3300003791 Bacteria 44225
5 Ga0055530_10001108 3300003791 Bacteria 21067
6 Ga0055531_10000676 3300003794 Bacteria 29096
7 Ga0055531_10002945 3300003794 Bacteria 11076
8 Ga0065165_1000896 3300005262 Bacteria 38454
9 Ga0065704_10000437 3300005289 Bacteria 43348
10 Ga0070677_10028951 3300005333 Bacteria 2097
11 Ga0070668_100061566 3300005347 Bacteria 2907
12 Ga0070674_100027868 3300005356 Bacteria 3705
13 Ga0070685_10012289 3300005466 Bacteria 4496
14 Ga0070665_100039698 3300005548 Bacteria 4733
15 Ga0081455_10000831 3300005937 Bacteria 39753
16 Ga0075364_10000276 3300006051 Bacteria 25091
17 Ga0075364_10033770 3300006051 Bacteria 3296
18 Ga0105240_10006581 3300009093 Bacteria 17057
19 Ga0105240_10031021 3300009093 Bacteria 6937
20 Ga0105238_10004900 3300009551 Bacteria 13243
21 Ga0105238_10036867 3300009551 Bacteria 4972
22 Ga0209026_1000812 3300025250 Bacteria 16772
23 Ga0209675_1000025 3300025291 Bacteria 294102
24 Ga0209676_1000086 3300025292 Bacteria 264155
25 Ga0209676_1000155 3300025292 Bacteria 165151
26 Ga0209676_1001500 3300025292 Bacteria 21339
27 Ga0209676_1020498 3300025292 Bacteria 2244
28 Ga0209025_1021667 3300025294 Bacteria 3450
29 Ga0209025_1028101 3300025294 Bacteria 2768
30 Ga0209758_1002376 3300025297 Bacteria 19372
31 Ga0209050_1000104 3300025298 Bacteria 228921
32 Ga0209050_1000245 3300025298 Bacteria 116929
33 Ga0209050_1006009 3300025298 Bacteria 7358
34 Ga0209257_1000145 3300025304 Bacteria 195152
35 Ga0209257_1000750 3300025304 Bacteria 49020
36 Ga0209257_1000860 3300025304 Bacteria 43237
37 Ga0209257_1000995 3300025304 Bacteria 38407
38 Ga0209257_1001181 3300025304 Bacteria 33006
39 Ga0207695_10021349 3300025913 Bacteria 7388
40 Ga0207694_10008306 3300025924 Bacteria 7848
41 Ga0207694_10058259 3300025924 Bacteria 3004
42 Ga0207686_10075954 3300025934 Bacteria 2177
43 Ga0307511_10002013 3300030521 Bacteria 21324
44 Ga0314311_1222767 3300030733 Bacteria 2395
45 Ga0307513_10006101 3300031456 Bacteria 15818
46 Ga0307414_10000412 3300032004 Bacteria 23093
47 Ga0307414_10000953 3300032004 Bacteria 14764
48 Ga0373936_0004648 3300035113 Bacteria 5193
49 Ga0373937_0026684 3300036401 Bacteria 5219
50 Ga0373937_0125750 3300036401 Bacteria 2391
51 Ga0400483_069055 3300039062 Unclassified 2596
52 Ga0439465_0006673 3300041413 Bacteria 3666
53 Ga0451802_0799475 3300041460 Bacteria 2650
54 Ga0439449_0000015 3300042007 Bacteria 49208
55 Ga0439449_0013766 3300042007 Bacteria 3044
56 Ga0495663_0000450 3300046525 Bacteria 15064
57 Ga0495645_0049868 3300046543 Bacteria 3048
58 Ga0495668_0000015 3300046616 Bacteria 441932
59 Ga0495686_0000023 3300047472 Bacteria 400457
60 Ga0495686_0009084 3300047472 Bacteria 7207
61 Ga0496114_0030548 3300048917 Bacteria 4433
62 Ga0496115_0001100 3300048918 Bacteria 19549
63 Ga0496123_0048943 3300048926 Bacteria 2839
64 Ga0496126_0069129 3300048929 Bacteria 3151
65 Ga0501032_0001946 3300049569 Bacteria 16249
66 Ga0501034_0012220 3300049571 Bacteria 8877
67 Ga0501034_0138395 3300049571 Bacteria 2415
68 Ga0501037_0006277 3300049573 Bacteria 8691
69 Ga0501038_0000868 3300049574 Bacteria 26760
70 Ga0501043_0080606 3300049579 Bacteria 2558
71 Ga0501067_0000100 3300049583 Bacteria 49264
72 Ga0501068_0005686 3300049584 Bacteria 6827
73 Ga0501068_0011029 3300049584 Bacteria 5086
74 Ga0501069_0021404 3300049585 Bacteria 3509
75 Ga0501070_0074477 3300049586 Bacteria 2810
76 Ga0501070_0122936 3300049586 Bacteria 2145
77 Ga0501073_0000208 3300049589 Bacteria 38819
78 Ga0501074_0000149 3300049590 Bacteria 36207
79 Ga0501077_0000918 3300049593 Bacteria 17737
80 Ga0501080_0002333 3300049742 Bacteria 16550
81 Ga0501080_0003256 3300049742 Bacteria 14330
82 Ga0501080_0179180 3300049742 Bacteria 1951
83 Ga0501044_0010912 3300049823 Bacteria 9861
84 nmdc:mga00v17_13862_c1 3300050491 Bacteria 4485
85 nmdc:mga00v17_308_c1 3300050491 Bacteria 28036
86 nmdc:mga00v17_40109_c1 3300050491 Bacteria 2808
87 nmdc:mga00v17_60273_c1 3300050491 Bacteria 2330
88 Ga0495601_0003819 3300053077 Bacteria 8667
89 Ga0500568_0008339 3300053139 Bacteria 5006
90 Ga0500627_0000003 3300053158 Bacteria 178186
91 Ga0500645_006563 3300053730 Bacteria 4132

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049585 Ga0501069_0021404 Ga0501069_0021404_1121_2809 503
2 3300049586 Ga0501070_0074477 Ga0501070_0074477_348_2150 549
3 3300049590 Ga0501074_0000149 Ga0501074_0000149_2105_3907 551
4 3300049742 Ga0501080_0002333 Ga0501080_0002333_8714_10516 551
5 3300049573 Ga0501037_0006277 Ga0501037_0006277_5046_6890 553
6 3300049742 Ga0501080_0179180 Ga0501080_0179180_51_1895 553
7 3300003781 Ga0055536_1000566 Ga0055536_100056612 562
8 3300025292 Ga0209676_1000155 Ga0209676_100015586 562
9 3300025298 Ga0209050_1006009 Ga0209050_10060094 562
10 3300046543 Ga0495645_0049868 Ga0495645_0049868_39_1880 574
11 3300048918 Ga0496115_0001100 Ga0496115_0001100_908_2749 575
12 3300025304 Ga0209257_1000750 Ga0209257_100075033 579
13 3300053730 Ga0500645_006563 Ga0500645_006563_317_2143 580
14 3300009093 Ga0105240_10006581 Ga0105240_100065815 581
15 3300009551 Ga0105238_10036867 Ga0105238_100368673 583
16 3300006051 Ga0075364_10033770 Ga0075364_100337702 587
17 3300050491 nmdc:mga00v17_13862_c1 nmdc:mga00v17_13862_c1_2230_4086 588
18 3300050491 nmdc:mga00v17_60273_c1 nmdc:mga00v17_60273_c1_213_2087 588
19 3300025292 Ga0209676_1020498 Ga0209676_10204981 591
20 3300049571 Ga0501034_0138395 Ga0501034_0138395_137_1984 591
21 3300050491 nmdc:mga00v17_308_c1 nmdc:mga00v17_308_c1_18560_20410 591
22 3300025294 Ga0209025_1028101 Ga0209025_10281012 592
23 3300025304 Ga0209257_1001181 Ga0209257_100118122 592
24 3300047472 Ga0495686_0009084 Ga0495686_0009084_3973_5811 592
25 3300049574 Ga0501038_0000868 Ga0501038_0000868_16435_18333 593
26 3300006051 Ga0075364_10000276 Ga0075364_1000027620 594
27 3300025291 Ga0209675_1000025 Ga0209675_1000025156 595
28 3300025294 Ga0209025_1021667 Ga0209025_10216672 595
29 3300049586 Ga0501070_0122936 Ga0501070_0122936_190_2013 595
30 3300053158 Ga0500627_0000003 Ga0500627_0000003_155520_157310 596
31 3300005937 Ga0081455_10000831 Ga0081455_1000083132 598
32 3300036401 Ga0373937_0026684 Ga0373937_0026684_1447_3357 599
33 iso_pu_bacteria 2582581279 2585147178 600
34 iso_pu_bacteria 2643221563 2643835839 600
35 iso_pu_bacteria 2643221608 2644056765 600
36 3300003791 Ga0055530_10000310 Ga0055530_1000031023 601
37 3300003794 Ga0055531_10002945 Ga0055531_100029452 601
38 3300025292 Ga0209676_1001500 Ga0209676_100150014 601
39 3300025298 Ga0209050_1000104 Ga0209050_100010414 601
40 3300025304 Ga0209257_1000860 Ga0209257_100086039 601
41 3300030521 Ga0307511_10002013 Ga0307511_100020139 601
42 3300046616 Ga0495668_0000015 Ga0495668_0000015_211931_213766 601
43 3300049571 Ga0501034_0012220 Ga0501034_0012220_6134_8008 601
44 3300050491 nmdc:mga00v17_40109_c1 nmdc:mga00v17_40109_c1_466_2373 601
45 3300053139 Ga0500568_0008339 Ga0500568_0008339_83_1900 601
46 3300009093 Ga0105240_10031021 Ga0105240_100310212 602
47 3300025913 Ga0207695_10021349 Ga0207695_100213492 602
48 3300025924 Ga0207694_10008306 Ga0207694_100083062 602
49 3300036401 Ga0373937_0125750 Ga0373937_0125750_381_2261 602
50 iso_pu_bacteria 2643221560 2643822916 602
51 3300025250 Ga0209026_1000812 Ga0209026_10008126 603
52 3300025934 Ga0207686_10075954 Ga0207686_100759541 603
53 3300005333 Ga0070677_10028951 Ga0070677_100289512 604
54 3300005356 Ga0070674_100027868 Ga0070674_1000278682 604
55 3300035113 Ga0373936_0004648 Ga0373936_0004648_1002_2840 605
56 3300003791 Ga0055530_10001108 Ga0055530_1000110812 606
57 3300003794 Ga0055531_10000676 Ga0055531_1000067619 606
58 3300005262 Ga0065165_1000896 Ga0065165_100089629 606
59 3300005548 Ga0070665_100039698 Ga0070665_1000396985 606
60 3300025297 Ga0209758_1002376 Ga0209758_100237610 606
61 3300025298 Ga0209050_1000245 Ga0209050_1000245113 606
62 3300025304 Ga0209257_1000995 Ga0209257_100099513 606
63 3300047472 Ga0495686_0000023 Ga0495686_0000023_290641_292503 607
64 iso_pu_bacteria 2896253425 2896256062 607
65 3300005466 Ga0070685_10012289 Ga0070685_100122892 608
66 3300049569 Ga0501032_0001946 Ga0501032_0001946_6410_8236 608
67 3300049579 Ga0501043_0080606 Ga0501043_0080606_80_1906 608
68 3300049583 Ga0501067_0000100 Ga0501067_0000100_6195_8021 608
69 3300049584 Ga0501068_0011029 Ga0501068_0011029_363_2189 608
70 3300049589 Ga0501073_0000208 Ga0501073_0000208_6219_8045 608
71 3300049593 Ga0501077_0000918 Ga0501077_0000918_6195_8021 608
72 3300049742 Ga0501080_0003256 Ga0501080_0003256_8284_10110 608
73 3300049823 Ga0501044_0010912 Ga0501044_0010912_1863_3689 608
74 3300048917 Ga0496114_0030548 Ga0496114_0030548_1798_3675 610
75 3300048929 Ga0496126_0069129 Ga0496126_0069129_325_2202 610
76 iso_pu_bacteria 2690315857 2691332935 610
77 iso_pu_bacteria 2919534386 2919535889 610
78 3300003781 Ga0055536_1003518 Ga0055536_10035185 611
79 3300025292 Ga0209676_1000086 Ga0209676_1000086115 611
80 3300025304 Ga0209257_1000145 Ga0209257_100014551 611
81 3300025924 Ga0207694_10058259 Ga0207694_100582592 611
82 3300049584 Ga0501068_0005686 Ga0501068_0005686_3591_5450 612
83 iso_pu_bacteria 2919513703 2919514701 613
84 iso_pu_bacteria 2919675420 2919676746 613
85 3300030733 Ga0314311_1222767 Ga0314311_12227671 614
86 iso_pu_bacteria 2894414249 2894417421 614
87 iso_pu_bacteria 2919688452 2919690595 614
88 iso_pu_bacteria 8054357960 8054359069 614
89 3300009551 Ga0105238_10004900 Ga0105238_1000490011 615
90 3300039062 Ga0400483_069055 Ga0400483_069055_401_2269 615
91 3300053077 Ga0495601_0003819 Ga0495601_0003819_2102_3997 616
92 3300005347 Ga0070668_100061566 Ga0070668_1000615663 617
93 iso_pu_bacteria 8002869464 8002871948 619
94 iso_pu_bacteria 2643221579 2643907847 620
95 iso_pu_bacteria 2895498888 2895503364 620
96 iso_pu_bacteria 2895511927 2895513199 620
97 iso_pu_bacteria 2895522137 2895523194 620
98 iso_pu_bacteria 2895525241 2895527096 620
99 iso_pu_bacteria 2923516293 2923518524 620
100 iso_pu_bacteria 2643221581 2643915945 621
101 3300032004 Ga0307414_10000412 Ga0307414_1000041221 622
102 3300032004 Ga0307414_10000953 Ga0307414_100009535 622
103 3300042007 Ga0439449_0013766 Ga0439449_0013766_602_2479 623
104 3300046525 Ga0495663_0000450 Ga0495663_0000450_2022_3935 623
105 2162886007 SwRhRL2b_contig_1192991 SwRhRL2b_0892.00005490 625
106 3300005289 Ga0065704_10000437 Ga0065704_1000043731 625
107 3300031456 Ga0307513_10006101 Ga0307513_100061017 625
108 3300041413 Ga0439465_0006673 Ga0439465_0006673_1237_3114 625
109 3300041460 Ga0451802_0799475 Ga0451802_0799475_17_2011 625
110 3300042007 Ga0439449_0000015 Ga0439449_0000015_1695_3572 625
111 3300048926 Ga0496123_0048943 Ga0496123_0048943_456_2342 625

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05960

DUF885

Bacterial protein of unknown function (DUF885)

100

649

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.9102 43 618
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.9056 43 618
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.8952 43 618
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.8908 43 618
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.8247 47 612
ID Description Score Start End Superfamily
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.9305 70 611 1.10.1370.30
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.897 70 611 1.10.1370.30
5jsnD00 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.4261 151 279 1.10.132.20
5jsnD00 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.4161 151 279 1.10.132.20
af_Q4CSJ0_1_138_1.25.40.90 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.4136 148 308 1.25.40.90
ID Description Score Start End GO Terms
AF-A0A8B6CFV5-F1-model_v4 DUF885 domain-containing protein 0.9956 506 621
AF-A0A4Q5XHJ5-F1-model_v4 DUF885 domain-containing protein 0.994 344 622
AF-A0A4Q5WPC8-F1-model_v4 DUF885 domain-containing protein 0.9939 381 622
AF-A0A2V8EC10-F1-model_v4 DUF885 domain-containing protein 0.9924 62 618
AF-A0A2D9SQ33-F1-model_v4 DUF885 domain-containing protein 0.9916 37 620

Feature Viewer

pLDDT pTM Quality
91.41 0.88 High
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Predicted Structure (AlphaFold2)

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