F061560
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 110 | 90 | 220 | 296 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2721755702|2723640613 |
| Length | 316 |
| Sequence | TDLARTLAVVIDEGTFDAAARRLRLTPSAVSQRIKALEQQLGRVLVVRSKPARATEAGAAVVRLARQLALLEHDTLAAFGLGGDDHGGDDGRDAGRPRPVTLPLAVNADSLATWFLPALARVADRHPVVFDLHRDDQDFTAGLLESGTVMGAVTSQADPVAGCLVRPLGTMRYEAVATPAFAARWHLPERTESFADAPIVEFDRRDDLQRQYLAARGVDPVAPPRHFVPASADFAAAIKLGLGWGLLPGFQSADDLAAGTLVPLGGPPVDVPLHWQQWNLRSPLLDAVADELAVEAATALRAAAPAATPAPPRAMC |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 2 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 7 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 8 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 9 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 10 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 11 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 12 | 3300013250 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 | Metagenome | Rhizosphere |
| 13 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 14 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 15 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 17 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 18 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 19 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 20 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 21 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 22 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 23 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 24 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 25 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 26 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 27 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 28 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 29 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 30 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 31 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 32 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 33 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 34 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 35 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 36 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 37 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 38 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 39 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 40 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 41 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 42 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 43 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 44 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 45 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 46 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 47 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 48 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 49 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 50 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 51 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 52 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 53 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 54 | 2721755702 | Agromyces sp. AR33 | Isolate | Rhizosphere |
| 55 | 2643221549 | Agromyces sp. Root1464 | Isolate | Unclassified |
| 56 | 2643221566 | Microbacterium sp. Root166 | Isolate | Unclassified |
| 57 | 2643221572 | Leifsonia sp. Root60 | Isolate | Unclassified |
| 58 | 2643221575 | Microbacterium sp. Root61 | Isolate | Unclassified |
| 59 | 2643221597 | Microbacterium sp. Root180 | Isolate | Unclassified |
| 60 | 2643221619 | Agromyces sp. Root81 | Isolate | Unclassified |
| 61 | 2643221669 | Leifsonia sp. Root1293 | Isolate | Unclassified |
| 62 | 2757320536 | Microbacterium sp. NFIX05 | Isolate | Unclassified |
| 63 | 2773857758 | Microbacterium chocolatum 1320 | Isolate | Unclassified |
| 64 | 2808606306 | Microbacterium sp. SLBN-146 | Isolate | Unclassified |
| 65 | 2808606368 | Microbacterium sp. SLBN-1 | Isolate | Unclassified |
| 66 | 2808606372 | Agromyces sp. 23-23 | Isolate | Unclassified |
| 67 | 2808606447 | Microbacterium sp. HAR-UPW-R2A-48 | Isolate | Unclassified |
| 68 | 2811994872 | Microbacterium sp. MU4Y-5-1 | Isolate | Unclassified |
| 69 | 2821268502 | Microbacterium sp. YT0620BN | Isolate | Unclassified |
| 70 | 2833709550 | Microbacterium sp. 3290 | Isolate | Rhizosphere |
| 71 | 2852632344 | Microbacterium sp. AK009 | Isolate | Rhizosphere |
| 72 | 2857720070 | Microbacterium sp. R-72113 | Isolate | Unclassified |
| 73 | 2857737099 | Lysinimonas sp. R-73066 | Isolate | Unclassified |
| 74 | 2895660088 | Leifsonia flava SYP-B2174 | Isolate | Rhizosphere |
| 75 | 2904509784 | Microbacterium sp. 1676 | Isolate | Rhizosphere |
| 76 | 2908678064 | Microbacterium sp. 1518 | Isolate | Rhizosphere |
| 77 | 2919069694 | Microbacterium sp. 1154 | Isolate | Unclassified |
| 78 | 2919443155 | Agromyces sp. 3263 | Isolate | Rhizosphere |
| 79 | 2928090899 | Microbacterium sp. 1262 | Isolate | Rhizosphere |
| 80 | 2935409751 | Agromyces sp. PvR057 | Isolate | Rhizosphere |
| 81 | 2946033335 | Microbacterium sp. W4I4 | Isolate | Rhizosphere |
| 82 | 2974294766 | Microbacterium proteolyticum SORGH_AS 209 | Isolate | Unclassified |
| 83 | 2974324384 | Microbacterium sp. SORGH_AS 344 | Isolate | Unclassified |
| 84 | 2977228692 | Microbacterium sp. SORGH_AS 421 | Isolate | Unclassified |
| 85 | 2977236895 | Microbacterium testaceum SORGH_AS 426 | Isolate | Unclassified |
| 86 | 2977264416 | Microbacterium testaceum SORGH_AS 594 | Isolate | Unclassified |
| 87 | 2984542743 | Microbacterium sp. SORGH_AS454 | Isolate | Aerial Root |
| 88 | 2984580707 | Microbacterium paludicola SORGH_AS919 | Isolate | Aerial Root |
| 89 | 8016254467 | Microbacterium sp. SLBN-111 (version 3) | Isolate | Rhizosphere |
| 90 | 8046352972 | Agromyces mangrovi NBRC 112812 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 66.36 |
| Metatranscriptomes | 0 |
| Isolates | 33.64 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.82 |
| Bulb | 0 |
| Endosphere | 9.09 |
| Nodule | 0 |
| Rhizoplane | 4.55 |
| Rhizosphere | 45.45 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootL2_10226776 | 3300003322 | Bacteria | 1077 |
| 2 | Ga0070675_100104267 | 3300005354 | Bacteria | 2392 |
| 3 | Ga0070667_100117741 | 3300005367 | Bacteria | 2308 |
| 4 | Ga0070679_100172996 | 3300005530 | Bacteria | 2132 |
| 5 | Ga0070702_100293033 | 3300005615 | Bacteria | 1122 |
| 6 | Ga0068861_100032705 | 3300005719 | Bacteria | 3832 |
| 7 | Ga0075365_10048323 | 3300006038 | Bacteria | 2800 |
| 8 | Ga0075364_10051386 | 3300006051 | Bacteria | 2692 |
| 9 | Ga0075364_10285128 | 3300006051 | Bacteria | 1124 |
| 10 | Ga0075369_10005334 | 3300006186 | Bacteria | 4795 |
| 11 | Ga0075370_10034026 | 3300006353 | Bacteria | 2856 |
| 12 | Ga0105244_10017766 | 3300009036 | Bacteria | 4009 |
| 13 | Ga0105244_10036008 | 3300009036 | Bacteria | 2596 |
| 14 | Ga0105244_10036028 | 3300009036 | Bacteria | 2595 |
| 15 | Ga0171462_1004 | 3300013250 | Bacteria | 678877 |
| 16 | Ga0157380_10005530 | 3300014326 | Bacteria | 8833 |
| 17 | Ga0207655_1009073 | 3300025728 | Bacteria | 6225 |
| 18 | Ga0207655_1032107 | 3300025728 | Bacteria | 2405 |
| 19 | Ga0207655_1059872 | 3300025728 | Bacteria | 1479 |
| 20 | Ga0207647_10111773 | 3300025904 | Bacteria | 1615 |
| 21 | Ga0207690_10278370 | 3300025932 | Bacteria | 1302 |
| 22 | Ga0207675_100014701 | 3300026118 | Bacteria | 7301 |
| 23 | Ga0307515_10160061 | 3300028794 | Bacteria | 2302 |
| 24 | Ga0307408_100108426 | 3300031548 | Bacteria | 2129 |
| 25 | Ga0307406_10000933 | 3300031901 | Bacteria | 16331 |
| 26 | Ga0307406_10014825 | 3300031901 | Bacteria | 4493 |
| 27 | Ga0307412_10308507 | 3300031911 | Bacteria | 1254 |
| 28 | Ga0307409_100267651 | 3300031995 | Bacteria | 1572 |
| 29 | Ga0307416_100984530 | 3300032002 | Bacteria | 946 |
| 30 | Ga0307414_10268415 | 3300032004 | Bacteria | 1428 |
| 31 | Ga0395901_0028515 | 3300038443 | Bacteria | 5741 |
| 32 | Ga0466965_0020240 | 3300044683 | Bacteria | 3196 |
| 33 | Ga0466960_0008091 | 3300044901 | Bacteria | 4296 |
| 34 | Ga0496100_0217486 | 3300048903 | Bacteria | 1401 |
| 35 | Ga0496104_0060527 | 3300048907 | Bacteria | 3587 |
| 36 | Ga0496113_0027079 | 3300048916 | Bacteria | 4106 |
| 37 | Ga0496114_0386915 | 3300048917 | Bacteria | 1238 |
| 38 | Ga0496115_0066686 | 3300048918 | Bacteria | 2909 |
| 39 | Ga0496117_0000061 | 3300048920 | Bacteria | 258454 |
| 40 | Ga0496119_0005875 | 3300048922 | Bacteria | 11582 |
| 41 | Ga0496119_0007162 | 3300048922 | Bacteria | 10113 |
| 42 | Ga0496119_0055547 | 3300048922 | Bacteria | 2405 |
| 43 | Ga0496119_0060634 | 3300048922 | Bacteria | 2263 |
| 44 | Ga0496120_0005083 | 3300048923 | Bacteria | 10645 |
| 45 | Ga0496120_0011218 | 3300048923 | Bacteria | 6180 |
| 46 | Ga0496122_0014603 | 3300048925 | Bacteria | 7580 |
| 47 | Ga0496122_0019489 | 3300048925 | Bacteria | 6193 |
| 48 | Ga0496123_0023311 | 3300048926 | Bacteria | 4739 |
| 49 | Ga0496123_0061083 | 3300048926 | Bacteria | 2425 |
| 50 | Ga0496124_0024606 | 3300048927 | Bacteria | 5470 |
| 51 | Ga0496124_0051990 | 3300048927 | Bacteria | 3483 |
| 52 | Ga0496124_0395552 | 3300048927 | Bacteria | 961 |
| 53 | Ga0496125_0000360 | 3300048928 | Bacteria | 86040 |
| 54 | Ga0496126_0005975 | 3300048929 | Bacteria | 13688 |
| 55 | Ga0496126_0048645 | 3300048929 | Bacteria | 3873 |
| 56 | Ga0496126_0353282 | 3300048929 | Bacteria | 1202 |
| 57 | Ga0501034_0006171 | 3300049571 | Bacteria | 12919 |
| 58 | Ga0501034_0009759 | 3300049571 | Bacteria | 10038 |
| 59 | Ga0501034_0037241 | 3300049571 | Bacteria | 4925 |
| 60 | Ga0501038_0042700 | 3300049574 | Bacteria | 3948 |
| 61 | Ga0501038_0050653 | 3300049574 | Bacteria | 3587 |
| 62 | Ga0501039_0177700 | 3300049575 | Bacteria | 1674 |
| 63 | Ga0501070_0002299 | 3300049586 | Bacteria | 16771 |
| 64 | Ga0501070_0003038 | 3300049586 | Bacteria | 14613 |
| 65 | Ga0501072_0090453 | 3300049588 | Bacteria | 2429 |
| 66 | Ga0501073_0000490 | 3300049589 | Bacteria | 27598 |
| 67 | Ga0501080_0185844 | 3300049742 | Bacteria | 1911 |
| 68 | Ga0501044_0315899 | 3300049823 | Bacteria | 1488 |
| 69 | nmdc:mga00v17_81384_c1 | 3300050491 | Bacteria | 2022 |
| 70 | nmdc:mga0yw44_73304_c1 | 3300050492 | Bacteria | 2130 |
| 71 | nmdc:mga06z11_65262_c1 | 3300050494 | Bacteria | 1910 |
| 72 | nmdc:mga0sz30_928_c2 | 3300050516 | Bacteria | 9558 |
| 73 | Ga0500568_0003817 | 3300053139 | Bacteria | 8229 |
| 74 | 2723640613 | 2721755702 | Bacteria | 4373124 |
| 75 | 2643766634 | 2643221549 | Bacteria | 4042819 |
| 76 | 2643846484 | 2643221566 | Bacteria | 3460379 |
| 77 | 2643877514 | 2643221572 | Bacteria | 3614809 |
| 78 | 2643886489 | 2643221575 | Bacteria | 4022601 |
| 79 | 2643996602 | 2643221597 | Bacteria | 3347721 |
| 80 | 2644113898 | 2643221619 | Bacteria | 4158469 |
| 81 | 2644384569 | 2643221669 | Bacteria | 3611286 |
| 82 | 2758227016 | 2757320536 | Bacteria | 3629334 |
| 83 | 2774381050 | 2773857758 | Bacteria | 3592392 |
| 84 | 2808630257 | 2808606306 | Bacteria | 3608896 |
| 85 | 2808883594 | 2808606368 | Bacteria | 3174172 |
| 86 | 2808903775 | 2808606372 | Bacteria | 4649509 |
| 87 | 2809228208 | 2808606447 | Bacteria | 3572005 |
| 88 | 2812324275 | 2811994872 | Bacteria | 4121241 |
| 89 | 2821270938 | 2821268502 | Bacteria | 3750023 |
| 90 | 2833711936 | 2833709550 | Bacteria | 4008291 |
| 91 | 2852634919 | 2852632344 | Bacteria | 3463163 |
| 92 | 2857722435 | 2857720070 | Bacteria | 3189373 |
| 93 | 2857740145 | 2857737099 | Bacteria | 3104305 |
| 94 | 2895662350 | 2895660088 | Bacteria | 3782833 |
| 95 | 2904511066 | 2904509784 | Bacteria | 3520416 |
| 96 | 2908680184 | 2908678064 | Bacteria | 3482747 |
| 97 | 2919072385 | 2919069694 | Bacteria | 3622919 |
| 98 | 2919444157 | 2919443155 | Bacteria | 4072969 |
| 99 | 2928092654 | 2928090899 | Bacteria | 3158267 |
| 100 | 2935410106 | 2935409751 | Bacteria | 4179611 |
| 101 | 2946036636 | 2946033335 | Bacteria | 3835514 |
| 102 | 2974296378 | 2974294766 | Bacteria | 3767688 |
| 103 | 2974327387 | 2974324384 | Bacteria | 3750535 |
| 104 | 2977229006 | 2977228692 | Bacteria | 3450105 |
| 105 | 2977237793 | 2977236895 | Bacteria | 3569373 |
| 106 | 2977267673 | 2977264416 | Bacteria | 3750737 |
| 107 | 2984544424 | 2984542743 | Bacteria | 3569378 |
| 108 | 2984583809 | 2984580707 | Bacteria | 3351387 |
| 109 | 8016256606 | 8016254467 | Bacteria | 3797036 |
| 110 | 8046355086 | 8046352972 | Bacteria | 3613806 |
| 111 | rootL2_10226776 | |||
| 112 | Ga0070675_100104267 | |||
| 113 | Ga0070667_100117741 | |||
| 114 | Ga0070679_100172996 | |||
| 115 | Ga0070702_100293033 | |||
| 116 | Ga0068861_100032705 | |||
| 117 | Ga0075365_10048323 | |||
| 118 | Ga0075364_10051386 | |||
| 119 | Ga0075364_10285128 | |||
| 120 | Ga0075369_10005334 | |||
| 121 | Ga0075370_10034026 | |||
| 122 | Ga0105244_10017766 | |||
| 123 | Ga0105244_10036008 | |||
| 124 | Ga0105244_10036028 | |||
| 125 | Ga0171462_1004 | |||
| 126 | Ga0157380_10005530 | |||
| 127 | Ga0207655_1009073 | |||
| 128 | Ga0207655_1032107 | |||
| 129 | Ga0207655_1059872 | |||
| 130 | Ga0207647_10111773 | |||
| 131 | Ga0207690_10278370 | |||
| 132 | Ga0207675_100014701 | |||
| 133 | Ga0307515_10160061 | |||
| 134 | Ga0307408_100108426 | |||
| 135 | Ga0307406_10000933 | |||
| 136 | Ga0307406_10014825 | |||
| 137 | Ga0307412_10308507 | |||
| 138 | Ga0307409_100267651 | |||
| 139 | Ga0307416_100984530 | |||
| 140 | Ga0307414_10268415 | |||
| 141 | Ga0395901_0028515 | |||
| 142 | Ga0466965_0020240 | |||
| 143 | Ga0466960_0008091 | |||
| 144 | Ga0496100_0217486 | |||
| 145 | Ga0496104_0060527 | |||
| 146 | Ga0496113_0027079 | |||
| 147 | Ga0496114_0386915 | |||
| 148 | Ga0496115_0066686 | |||
| 149 | Ga0496117_0000061 | |||
| 150 | Ga0496119_0005875 | |||
| 151 | Ga0496119_0007162 | |||
| 152 | Ga0496119_0055547 | |||
| 153 | Ga0496119_0060634 | |||
| 154 | Ga0496120_0005083 | |||
| 155 | Ga0496120_0011218 | |||
| 156 | Ga0496122_0014603 | |||
| 157 | Ga0496122_0019489 | |||
| 158 | Ga0496123_0023311 | |||
| 159 | Ga0496123_0061083 | |||
| 160 | Ga0496124_0024606 | |||
| 161 | Ga0496124_0051990 | |||
| 162 | Ga0496124_0395552 | |||
| 163 | Ga0496125_0000360 | |||
| 164 | Ga0496126_0005975 | |||
| 165 | Ga0496126_0048645 | |||
| 166 | Ga0496126_0353282 | |||
| 167 | Ga0501034_0006171 | |||
| 168 | Ga0501034_0009759 | |||
| 169 | Ga0501034_0037241 | |||
| 170 | Ga0501038_0042700 | |||
| 171 | Ga0501038_0050653 | |||
| 172 | Ga0501039_0177700 | |||
| 173 | Ga0501070_0002299 | |||
| 174 | Ga0501070_0003038 | |||
| 175 | Ga0501072_0090453 | |||
| 176 | Ga0501073_0000490 | |||
| 177 | Ga0501080_0185844 | |||
| 178 | Ga0501044_0315899 | |||
| 179 | nmdc:mga00v17_81384_c1 | |||
| 180 | nmdc:mga0yw44_73304_c1 | |||
| 181 | nmdc:mga06z11_65262_c1 | |||
| 182 | nmdc:mga0sz30_928_c2 | |||
| 183 | Ga0500568_0003817 | |||
| 184 | 2723640613 | |||
| 185 | 2643766634 | |||
| 186 | 2643846484 | |||
| 187 | 2643877514 | |||
| 188 | 2643886489 | |||
| 189 | 2643996602 | |||
| 190 | 2644113898 | |||
| 191 | 2644384569 | |||
| 192 | 2758227016 | |||
| 193 | 2774381050 | |||
| 194 | 2808630257 | |||
| 195 | 2808883594 | |||
| 196 | 2808903775 | |||
| 197 | 2809228208 | |||
| 198 | 2812324275 | |||
| 199 | 2821270938 | |||
| 200 | 2833711936 | |||
| 201 | 2852634919 | |||
| 202 | 2857722435 | |||
| 203 | 2857740145 | |||
| 204 | 2895662350 | |||
| 205 | 2904511066 | |||
| 206 | 2908680184 | |||
| 207 | 2919072385 | |||
| 208 | 2919444157 | |||
| 209 | 2928092654 | |||
| 210 | 2935410106 | |||
| 211 | 2946036636 | |||
| 212 | 2974296378 | |||
| 213 | 2974327387 | |||
| 214 | 2977229006 | |||
| 215 | 2977237793 | |||
| 216 | 2977267673 | |||
| 217 | 2984544424 | |||
| 218 | 2984583809 | |||
| 219 | 8016256606 | |||
| 220 | 8046355086 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4iht-assembly1.cif.gz_A | crystal structure of benm_dbd/bena site 1 dna complex | 0.9078 | 3 | 84 |
| 4ihs-assembly3.cif.gz_C | crystal structure of benm_dbd/catb site 1 dna complex | 0.906 | 3 | 84 |
| 4ihs-assembly1.cif.gz_A | crystal structure of benm_dbd/catb site 1 dna complex | 0.9039 | 3 | 84 |
| 4iht-assembly2.cif.gz_C | crystal structure of benm_dbd/bena site 1 dna complex | 0.898 | 3 | 84 |
| 5fo5-assembly1.cif.gz_A-2 | structure of the dna-binding domain of escherichia coli methionine biosynthesis regulator metr | 0.8937 | 2 | 83 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WMF5_6_80_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9452 | 3 | 76 | 1.10.10.10 |
| af_O50442_408_536_1.10.10.2840 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;PucR C-terminal helix-turn-helix domain | 0.9388 | 9 | 43 | 1.10.10.2840 |
| 3ispA01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9266 | 2 | 84 | 1.10.10.10 |
| af_P67662_3_85_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.926 | 4 | 84 | 1.10.10.10 |
| 3ispB01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9224 | 2 | 71 | 1.10.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-F3ZJR5-F1-model_v4 | Putative chromosome replication initiation inhibitor protein | 0.9038 | 2 | 91 |
GO:0003700
|
| AF-A0A3E0DPU1-F1-model_v4 | LysR family transcriptional regulator (Chromosome initiation inhibitor) | 0.866 | 2 | 286 |
GO:0003700
|
| AF-A0A810NFK9-F1-model_v4 | Putative transcriptional regulator, LysR family protein | 0.8502 | 1 | 285 |
GO:0003700
|
| AF-A0A0P9MYY8-F1-model_v4 | LysR substrate-binding domain-containing protein | 0.8398 | 99 | 285 |
GO:0003700
|
| AF-A0A356HG98-F1-model_v4 | deleted | 0.8375 | 101 | 285 |
|