F059396

General Info

Members Datasets Scaffolds Average Seq Length
110 79 220 406

Family's Representative Sequence

Representative Sequence 3300025913|Ga0207695_10007536|Ga0207695_100075369
Length 444
Sequence MAPGVVWLDRMSSEGPRDKTRPRLRLRITARAETIIRSGHPWLFAESILEQNRAGDLGEIAVVYDRRDRFLALGFFDPDSPLRVRVLHRGQPVQVDAEWWKGRFERALEKRRLLFDERTTGFRWINGESDGWPGLVLDTYGGTVVLKLYTSAWLPWLEQVIQLVRAQLSSVRIVLRLSRNIQDRVAGSFGRADGEVIWGQPLDGPVIFQETGLRFEAEVLRGQKTGFFLDQRENRRHVEALAVGRRVLNAFSFSGGFSLYAARGGARSVTDVDISPHALAASRRNFGLNQSVEAVARCRHDTIQADVFEWLALGREDSRPVVKGRGLGGENSSSPRKGGLFDLVILDPPSLAKREIERAGAIRAYGRLATLGLGHLTEAGIMVACSCSAHVSATEFFEVVEGVARLSKRPFRVLQTTLQPADHPASFPEAKYLKAIYLELRRAC

Samples

Sample ID Description Type Environment
1 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
20 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
21 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
22 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
25 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
32 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
33 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
34 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
37 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
38 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
41 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
42 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
43 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
44 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
45 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
46 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
47 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
48 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
49 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
50 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
51 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
52 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
53 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
54 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
55 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
56 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
57 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
61 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
66 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
67 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
68 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
69 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
70 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
71 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
76 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
77 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
78 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
79 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.18
Metatranscriptomes 0
Isolates 1.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.91
Rhizosphere 94.55
Stem 0
Stem Tuber 0
Unclassified 7.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207695_10007536 3300025913 Bacteria 13797
2 rootH2_10013509 3300003320 Bacteria 2593
3 Ga0070680_100096880 3300005336 Bacteria 2446
4 Ga0070689_100078984 3300005340 Bacteria 2580
5 Ga0070694_100012712 3300005444 Bacteria 5241
6 Ga0070678_100036618 3300005456 Bacteria 3436
7 Ga0070698_100034048 3300005471 Bacteria 5277
8 Ga0070699_100007520 3300005518 Bacteria 9476
9 Ga0070686_100016037 3300005544 Bacteria 4353
10 Ga0068855_100018587 3300005563 Bacteria 8359
11 Ga0068857_100117892 3300005577 Bacteria 2389
12 Ga0068856_100000747 3300005614 Bacteria 35242
13 Ga0068861_100048741 3300005719 Unclassified 3204
14 Ga0068862_100025084 3300005844 Bacteria 5004
15 Ga0068871_100099496 3300006358 Bacteria 2434
16 Ga0075428_100004681 3300006844 Bacteria 15149
17 Ga0105240_10001027 3300009093 Bacteria 49580
18 Ga0105240_10015951 3300009093 Bacteria 10189
19 Ga0105240_10089273 3300009093 Bacteria 3770
20 Ga0111539_10083572 3300009094 Bacteria 3754
21 Ga0105238_10003067 3300009551 Bacteria 16654
22 Ga0105238_10111540 3300009551 Bacteria 2715
23 Ga0105249_10038444 3300009553 Bacteria 4342
24 Ga0105249_10145463 3300009553 Bacteria 2277
25 Ga0157374_10153230 3300013296 Bacteria 2242
26 Ga0157378_10282528 3300013297 Unclassified 1600
27 Ga0163163_10095060 3300014325 Bacteria 2999
28 Ga0157376_10058700 3300014969 Bacteria 3224
29 Ga0207670_10008524 3300025936 Bacteria 5791
30 Ga0207667_10026039 3300025949 Bacteria 6396
31 Ga0207702_10000285 3300026078 Bacteria 58642
32 Ga0207702_10008627 3300026078 Bacteria 8597
33 Ga0207674_10134772 3300026116 Bacteria 2432
34 Ga0207675_100021322 3300026118 Bacteria 6035
35 Ga0268265_10031587 3300028380 Bacteria 3825
36 Ga0265337_1001049 3300028556 Bacteria 14273
37 Ga0265337_1015595 3300028556 Bacteria 2481
38 Ga0265326_10005802 3300028558 Bacteria 3877
39 Ga0265319_1000019 3300028563 Bacteria 154537
40 Ga0265334_10035984 3300028573 Unclassified 1957
41 Ga0265338_10000008 3300028800 Bacteria 481542
42 Ga0265338_10000604 3300028800 Bacteria 63073
43 Ga0265338_10018150 3300028800 Bacteria 7547
44 Ga0265338_10030748 3300028800 Bacteria 5280
45 Ga0265338_10031241 3300028800 Bacteria 5224
46 Ga0265338_10196042 3300028800 Bacteria 1527
47 Ga0265324_10001294 3300029957 Bacteria 14689
48 Ga0265324_10009410 3300029957 Bacteria 3816
49 Ga0265324_10012135 3300029957 Bacteria 3260
50 Ga0265320_10000262 3300031240 Bacteria 43479
51 Ga0265320_10000566 3300031240 Bacteria 28582
52 Ga0265320_10008363 3300031240 Bacteria 6336
53 Ga0265325_10024683 3300031241 Bacteria 3268
54 Ga0265327_10005476 3300031251 Bacteria 10583
55 Ga0265316_10034765 3300031344 Bacteria 4092
56 Ga0265316_10093705 3300031344 Bacteria 2288
57 Ga0265316_10203929 3300031344 Bacteria 1465
58 Ga0265342_10118544 3300031712 Unclassified 1492
59 Ga0307410_10014990 3300031852 Bacteria 4583
60 Ga0307416_100226356 3300032002 Unclassified 1799
61 Ga0307414_10042084 3300032004 Bacteria 3101
62 Ga0373930_0007849 3300034816 Unclassified 1849
63 Ga0373928_0000163 3300035084 Bacteria 12854
64 Ga0373929_0000239 3300035085 Bacteria 10050
65 Ga0373944_0000041 3300035089 Bacteria 21249
66 Ga0373949_0001460 3300035090 Bacteria 6746
67 Ga0373932_0000001 3300035112 Bacteria 1459067
68 Ga0373945_0002685 3300035116 Bacteria 5581
69 Ga0373962_0000021 3300035242 Bacteria 43462
70 Ga0373931_0000004 3300035691 Bacteria 535140
71 Ga0373935_0001937 3300035692 Bacteria 11638
72 Ga0373935_0076307 3300035692 Bacteria 2170
73 Ga0373927_0004132 3300035695 Bacteria 10219
74 Ga0373927_0023249 3300035695 Bacteria 4060
75 Ga0373927_0030311 3300035695 Bacteria 3529
76 Ga0373947_0005355 3300035725 Bacteria 7490
77 Ga0373937_0034883 3300036401 Bacteria 4577
78 Ga0316584_0062454 3300036712 Bacteria 2790
79 Ga0373925_0001193 3300037068 Bacteria 22925
80 Ga0373925_0001761 3300037068 Bacteria 18120
81 Ga0373925_0031900 3300037068 Bacteria 3876
82 Ga0395905_0017285 3300037471 Bacteria 6850
83 Ga0395901_0293472 3300038443 Bacteria 1687
84 Ga0451577_0007712 3300042876 Bacteria 10551
85 Ga0451577_0014621 3300042876 Bacteria 7312
86 Ga0451577_0043986 3300042876 Bacteria 3998
87 Ga0453684_0002206 3300044712 Bacteria 48402
88 Ga0453684_0140031 3300044712 Bacteria 2891
89 Ga0453684_0450280 3300044712 Unclassified 1433
90 Ga0451576_0018726 3300045051 Bacteria 7574
91 Ga0451576_0018771 3300045051 Bacteria 7562
92 Ga0451576_0052347 3300045051 Unclassified 4278
93 Ga0451576_0086119 3300045051 Bacteria 3268
94 Ga0451576_0199365 3300045051 Bacteria 2090
95 Ga0451576_0439992 3300045051 Bacteria 1368
96 Ga0495630_0198373 3300046517 Bacteria 1531
97 Ga0495666_0016485 3300046526 Bacteria 3680
98 Ga0496115_0002799 3300048918 Bacteria 12533
99 Ga0496117_0071976 3300048920 Bacteria 2314
100 Ga0496118_0112155 3300048921 Bacteria 1806
101 Ga0496126_0059181 3300048929 Bacteria 3451
102 Ga0501031_0044735 3300049568 Bacteria 2889
103 Ga0501036_0267154 3300049572 Bacteria 1433
104 Ga0501043_0155190 3300049579 Bacteria 1790
105 Ga0501046_0160739 3300049580 Bacteria 1690
106 Ga0501080_0003047 3300049742 Bacteria 14790
107 Ga0501083_0028919 3300049744 Bacteria 3817
108 Ga0501044_0324452 3300049823 Bacteria 1463
109 2526061658 2524614857 Bacteria 4146328
110 2740062813 2739367875 Bacteria 4157290
111 Ga0207695_10007536
112 rootH2_10013509
113 Ga0070680_100096880
114 Ga0070689_100078984
115 Ga0070694_100012712
116 Ga0070678_100036618
117 Ga0070698_100034048
118 Ga0070699_100007520
119 Ga0070686_100016037
120 Ga0068855_100018587
121 Ga0068857_100117892
122 Ga0068856_100000747
123 Ga0068861_100048741
124 Ga0068862_100025084
125 Ga0068871_100099496
126 Ga0075428_100004681
127 Ga0105240_10001027
128 Ga0105240_10015951
129 Ga0105240_10089273
130 Ga0111539_10083572
131 Ga0105238_10003067
132 Ga0105238_10111540
133 Ga0105249_10038444
134 Ga0105249_10145463
135 Ga0157374_10153230
136 Ga0157378_10282528
137 Ga0163163_10095060
138 Ga0157376_10058700
139 Ga0207670_10008524
140 Ga0207667_10026039
141 Ga0207702_10000285
142 Ga0207702_10008627
143 Ga0207674_10134772
144 Ga0207675_100021322
145 Ga0268265_10031587
146 Ga0265337_1001049
147 Ga0265337_1015595
148 Ga0265326_10005802
149 Ga0265319_1000019
150 Ga0265334_10035984
151 Ga0265338_10000008
152 Ga0265338_10000604
153 Ga0265338_10018150
154 Ga0265338_10030748
155 Ga0265338_10031241
156 Ga0265338_10196042
157 Ga0265324_10001294
158 Ga0265324_10009410
159 Ga0265324_10012135
160 Ga0265320_10000262
161 Ga0265320_10000566
162 Ga0265320_10008363
163 Ga0265325_10024683
164 Ga0265327_10005476
165 Ga0265316_10034765
166 Ga0265316_10093705
167 Ga0265316_10203929
168 Ga0265342_10118544
169 Ga0307410_10014990
170 Ga0307416_100226356
171 Ga0307414_10042084
172 Ga0373930_0007849
173 Ga0373928_0000163
174 Ga0373929_0000239
175 Ga0373944_0000041
176 Ga0373949_0001460
177 Ga0373932_0000001
178 Ga0373945_0002685
179 Ga0373962_0000021
180 Ga0373931_0000004
181 Ga0373935_0001937
182 Ga0373935_0076307
183 Ga0373927_0004132
184 Ga0373927_0023249
185 Ga0373927_0030311
186 Ga0373947_0005355
187 Ga0373937_0034883
188 Ga0316584_0062454
189 Ga0373925_0001193
190 Ga0373925_0001761
191 Ga0373925_0031900
192 Ga0395905_0017285
193 Ga0395901_0293472
194 Ga0451577_0007712
195 Ga0451577_0014621
196 Ga0451577_0043986
197 Ga0453684_0002206
198 Ga0453684_0140031
199 Ga0453684_0450280
200 Ga0451576_0018726
201 Ga0451576_0018771
202 Ga0451576_0052347
203 Ga0451576_0086119
204 Ga0451576_0199365
205 Ga0451576_0439992
206 Ga0495630_0198373
207 Ga0495666_0016485
208 Ga0496115_0002799
209 Ga0496117_0071976
210 Ga0496118_0112155
211 Ga0496126_0059181
212 Ga0501031_0044735
213 Ga0501036_0267154
214 Ga0501043_0155190
215 Ga0501046_0160739
216 Ga0501080_0003047
217 Ga0501083_0028919
218 Ga0501044_0324452
219 2526061658
220 2740062813

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17785

PUA_3

PUA-like domain

26

89

0.97

PF10672

Methyltrans_SAM

S-adenosylmethionine-dependent methyltransferase

134

310

0.89

PF02475

Met_10

Met-10+ like-protein

137

312

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cww-assembly1.cif.gz_A-2 crystal structure of thermus thermophilus ttha1280, a putative sam-dependent rna methyltransferase, in complex with s-adenosyl-l-homocysteine 0.9092 15 409
1wxw-assembly1.cif.gz_A crystal structure of tt1595, a putative sam-dependent methyltransferase from thermus thermophillus hb8 0.9085 12 409
4dmg-assembly1.cif.gz_B thermus thermophilus m5c1942 methyltransferase rlmo 0.9076 12 410
1wxw-assembly1.cif.gz_A crystal structure of tt1595, a putative sam-dependent methyltransferase from thermus thermophillus hb8 0.9063 12 409
2cww-assembly1.cif.gz_A-2 crystal structure of thermus thermophilus ttha1280, a putative sam-dependent rna methyltransferase, in complex with s-adenosyl-l-homocysteine 0.9046 15 409
ID Description Score Start End Superfamily
1wxwA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9173 197 409 3.40.50.150
2as0B01 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4;PUA domain 0.9142 15 81 2.30.130.10
af_A0A1D6H1M4_236_424_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9114 234 407 3.40.50.150
af_I1KW47_39_110_2.30.130.10 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4;PUA domain 0.9107 14 79 2.30.130.10
1wxwA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9087 197 409 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A521ZMA5-F1-model_v4 Class I SAM-dependent rRNA methyltransferase 0.9866 210 408 GO:0005737
GO:0008168
GO:0032259
AF-A0A521ZMA5-F1-model_v4 Class I SAM-dependent rRNA methyltransferase 0.9768 210 408 GO:0005737
GO:0008168
GO:0032259
AF-A0A2E0V0H2-F1-model_v4 PUA domain-containing protein 0.9726 10 409 GO:0003723
GO:0005737
GO:0006364
GO:0008168
GO:0032259
AF-A0A090W7N4-F1-model_v4 LSU m5C1962 methyltransferase RlmI 0.9714 291 410 GO:0005737
GO:0008168
GO:0032259
AF-A0A2N2NKH3-F1-model_v4 Class I SAM-dependent rRNA methyltransferase 0.9701 11 408 GO:0003723
GO:0005737
GO:0008168
GO:0032259

Map