F044092

General Info

Members Datasets Scaffolds Average Seq Length
107 69 93 355

Family's Representative Sequence

Representative Sequence 3300031691|Ga0316579_10064328|Ga0316579_100643282
Length 407
Sequence MGKGNVRVGADAPGAGDESSSNRAAARAPEIRRLLLGAYDAEKRDLPWRGESDPYRIWVSEVMLQQTRVETVIPYYKEWVTRFPSLETLAMADEEEVLRAWQGLGYYSRARNLHGAARVVRERLGGALPGSYLALRALPGVGEYTAGAVASIAFGEAVPAVDGNARRVLSRIFDLPAPAPRVIRNLAGTLVDPARPGDFNQALMELGSRICTPRSPGCERCPVASLCLARERGSVEDRPGARVRRPPKEVDLVVLVGVVVGPGSPRFLVRKRPPTGLLAGLWEFPTIEVEPGEGALGRALEWAREPGILGEGELPGEEMEKVAVEGGVSLDSSPGGPAMCRRLDSVEHLFTHLRARYHPFLIRLSGERGPLAGGRYVSLEELEKLPVPVAQRRILDAAMAAMAADGG

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
3 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
4 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
5 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
6 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
7 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
8 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
9 2857472729 Cohnella sp. R-74144 Isolate Unclassified
10 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
11 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
12 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
13 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
14 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
15 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
16 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
45 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
46 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
47 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
48 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
49 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
50 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
51 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
52 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
53 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
54 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
55 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
59 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
60 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
61 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
64 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
65 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
66 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
67 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
68 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
69 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.92
Metatranscriptomes 0
Isolates 13.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.87
Nodule 0.93
Rhizoplane 0.93
Rhizosphere 87.85
Stem 0
Stem Tuber 0
Unclassified 8.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2852374 2162886007 Bacteria 5904
2 Ga0055532_1000546 3300003758 Bacteria 16044
3 Ga0065704_10000260 3300005289 Bacteria 50456
4 Ga0065707_10000492 3300005295 Bacteria 70979
5 Ga0065707_10087058 3300005295 Bacteria 5185
6 Ga0065707_10096754 3300005295 Unclassified 3237
7 Ga0070658_10086012 3300005327 Bacteria 2586
8 Ga0070659_100122094 3300005366 Bacteria 2111
9 Ga0070700_100166476 3300005441 Bacteria 1523
10 Ga0070694_100085845 3300005444 Bacteria 2199
11 Ga0070681_10018054 3300005458 Bacteria 7049
12 Ga0070706_100128116 3300005467 Bacteria 2368
13 Ga0070706_100468964 3300005467 Bacteria 1171
14 Ga0070698_100112111 3300005471 Bacteria 2693
15 Ga0070699_100009114 3300005518 Bacteria 8602
16 Ga0070679_100132591 3300005530 Bacteria 2473
17 Ga0068855_100006181 3300005563 Bacteria 14598
18 Ga0068857_100079446 3300005577 Bacteria 2928
19 Ga0068859_100067924 3300005617 Unclassified 3600
20 Ga0075428_100206735 3300006844 Bacteria 2121
21 Ga0075431_100015776 3300006847 Bacteria 7660
22 Ga0075431_100057556 3300006847 Bacteria 4010
23 Ga0075431_100237533 3300006847 Bacteria 1855
24 Ga0075429_100011813 3300006880 Bacteria 7571
25 Ga0075429_100050102 3300006880 Unclassified 3633
26 Ga0075429_100062059 3300006880 Bacteria 3256
27 Ga0075429_100147810 3300006880 Bacteria 2057
28 Ga0097620_100067923 3300006931 Unclassified 3600
29 Ga0114129_10044619 3300009147 Bacteria 6236
30 Ga0114129_10048290 3300009147 Bacteria 5981
31 Ga0114129_10068181 3300009147 Bacteria 4960
32 Ga0114129_10155993 3300009147 Bacteria 3122
33 Ga0105243_10326652 3300009148 Unclassified 1400
34 Ga0157370_10005346 3300013104 Bacteria 14420
35 Ga0209147_100029 3300025229 Bacteria 376498
36 Ga0207705_10042865 3300025909 Bacteria 3249
37 Ga0207684_10312039 3300025910 Bacteria 1356
38 Ga0207662_10158838 3300025918 Bacteria 1443
39 Ga0207667_10038563 3300025949 Bacteria 5101
40 Ga0207674_10258165 3300026116 Unclassified 1690
41 Ga0316579_10029026 3300031691 Bacteria 2522
42 Ga0316579_10064328 3300031691 Bacteria 1730
43 Ga0316578_10000514 3300031728 Bacteria 13142
44 Ga0316578_10002959 3300031728 Bacteria 7638
45 Ga0316577_10000004 3300031733 Bacteria 48694
46 Ga0316577_10007758 3300031733 Bacteria 5732
47 Ga0316577_10011022 3300031733 Bacteria 4889
48 Ga0307407_10067256 3300031903 Bacteria 2117
49 Ga0316583_10000065 3300032133 Bacteria 21367
50 Ga0316585_10009341 3300032137 Bacteria 2859
51 Ga0316574_0002629 3300035398 Bacteria 9061
52 Ga0316582_0035166 3300036647 Bacteria 3091
53 Ga0316584_0016827 3300036712 Bacteria 5247
54 Ga0316584_0051543 3300036712 Bacteria 3077
55 Ga0400484_08437 3300038725 Bacteria 1277
56 Ga0451577_0029650 3300042876 Bacteria 4946
57 Ga0451577_0071974 3300042876 Bacteria 3083
58 Ga0451577_0157922 3300042876 Unclassified 2041
59 Ga0451577_0208502 3300042876 Bacteria 1765
60 Ga0453683_0001151 3300044673 Bacteria 24005
61 Ga0453684_0002378 3300044712 Bacteria 45940
62 Ga0453684_0003083 3300044712 Bacteria 38502
63 Ga0453684_0003802 3300044712 Bacteria 33303
64 Ga0453684_0018085 3300044712 Bacteria 10850
65 Ga0453684_0028871 3300044712 Bacteria 7895
66 Ga0453684_0041286 3300044712 Bacteria 6244
67 Ga0453684_0042099 3300044712 Bacteria 6163
68 Ga0453684_0169026 3300044712 Unclassified 2579
69 Ga0453684_0183033 3300044712 Bacteria 2458
70 Ga0451576_0137382 3300045051 Bacteria 2549
71 Ga0451576_0292493 3300045051 Unclassified 1703
72 Ga0451576_0675673 3300045051 Bacteria 1085
73 Ga0495617_036061 3300046452 Bacteria 1659
74 Ga0496106_0277263 3300048909 Bacteria 1343
75 Ga0496122_0015872 3300048925 Bacteria 7172
76 Ga0501034_0329417 3300049571 Bacteria 1459
77 Ga0501038_0304603 3300049574 Bacteria 1250
78 Ga0501075_0147997 3300049591 Bacteria 1790
79 Ga0501076_0076636 3300049592 Bacteria 2682
80 nmdc:mga05p37_165903_c1 3300050507 Bacteria 2695
81 nmdc:mga05p37_220357_c1 3300050507 Unclassified 2290
82 nmdc:mga05p37_24192_c1 3300050507 Bacteria 7380
83 nmdc:mga05p37_458519_c1 3300050507 Bacteria 1474
84 nmdc:mga09592_113933_c1 3300050508 Bacteria 2321
85 nmdc:mga09592_307730_c1 3300050508 Bacteria 1373
86 nmdc:mga09592_317039_c1 3300050508 Bacteria 1351
87 nmdc:mga09592_62006_c1 3300050508 Unclassified 3163
88 nmdc:mga0qj67_137134_c1 3300050509 Bacteria 1982
89 nmdc:mga0qj67_78132_c1 3300050509 Unclassified 2648
90 nmdc:mga06r32_136497_c1 3300050510 Archaea 2427
91 nmdc:mga06r32_177405_c1 3300050510 Bacteria 2115
92 nmdc:mga06r32_252338_c1 3300050510 Bacteria 1752
93 Ga0501084_0110127 3300054114 Bacteria 2314

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025918 Ga0207662_10158838 Ga0207662_101588381 301
2 3300050509 nmdc:mga0qj67_137134_c1 nmdc:mga0qj67_137134_c1_1008_1958 302
3 3300042876 Ga0451577_0157922 Ga0451577_0157922_1106_2029 306
4 3300042876 Ga0451577_0029650 Ga0451577_0029650_2036_2974 311
5 3300048925 Ga0496122_0015872 Ga0496122_0015872_2749_4101 311
6 3300005441 Ga0070700_100166476 Ga0070700_1001664761 312
7 3300009147 Ga0114129_10155993 Ga0114129_101559932 312
8 3300044712 Ga0453684_0041286 Ga0453684_0041286_4741_5682 312
9 3300044712 Ga0453684_0183033 Ga0453684_0183033_886_1827 312
10 3300045051 Ga0451576_0292493 Ga0451576_0292493_613_1566 312
11 3300050507 nmdc:mga05p37_165903_c1 nmdc:mga05p37_165903_c1_977_1963 312
12 3300050507 nmdc:mga05p37_458519_c1 nmdc:mga05p37_458519_c1_275_1255 312
13 3300050508 nmdc:mga09592_113933_c1 nmdc:mga09592_113933_c1_133_1113 312
14 3300050508 nmdc:mga09592_317039_c1 nmdc:mga09592_317039_c1_67_1080 312
15 3300050509 nmdc:mga0qj67_78132_c1 nmdc:mga0qj67_78132_c1_55_1053 312
16 3300050510 nmdc:mga06r32_136497_c1 nmdc:mga06r32_136497_c1_1366_2364 312
17 3300050510 nmdc:mga06r32_177405_c1 nmdc:mga06r32_177405_c1_621_1634 312
18 3300050510 nmdc:mga06r32_252338_c1 nmdc:mga06r32_252338_c1_460_1440 312
19 3300005295 Ga0065707_10096754 Ga0065707_100967542 318
20 3300050508 nmdc:mga09592_307730_c1 nmdc:mga09592_307730_c1_44_1033 318
21 3300042876 Ga0451577_0208502 Ga0451577_0208502_77_1117 321
22 3300045051 Ga0451576_0675673 Ga0451576_0675673_79_1062 325
23 3300005458 Ga0070681_10018054 Ga0070681_100180549 337
24 3300005530 Ga0070679_100132591 Ga0070679_1001325912 337
25 3300005563 Ga0068855_100006181 Ga0068855_1000061818 338
26 3300013104 Ga0157370_10005346 Ga0157370_100053468 338
27 3300025949 Ga0207667_10038563 Ga0207667_100385636 338
28 3300005327 Ga0070658_10086012 Ga0070658_100860123 339
29 3300005366 Ga0070659_100122094 Ga0070659_1001220942 339
30 3300025909 Ga0207705_10042865 Ga0207705_100428652 339
31 3300046452 Ga0495617_036061 Ga0495617_036061_488_1645 339
32 iso_pu_bacteria 2852673933 2852677190 340
33 iso_pu_bacteria 2928510474 2928515090 340
34 3300049571 Ga0501034_0329417 Ga0501034_0329417_139_1248 341
35 3300044712 Ga0453684_0042099 Ga0453684_0042099_2685_3719 342
36 3300049574 Ga0501038_0304603 Ga0501038_0304603_166_1218 342
37 3300049591 Ga0501075_0147997 Ga0501075_0147997_150_1202 342
38 3300049592 Ga0501076_0076636 Ga0501076_0076636_1208_2260 342
39 3300044673 Ga0453683_0001151 Ga0453683_0001151_21371_22408 343
40 3300032133 Ga0316583_10000065 Ga0316583_100000652 344
41 3300042876 Ga0451577_0071974 Ga0451577_0071974_1862_2980 344
42 3300006847 Ga0075431_100237533 Ga0075431_1002375332 345
43 3300031691 Ga0316579_10029026 Ga0316579_100290262 345
44 3300031728 Ga0316578_10002959 Ga0316578_1000295911 345
45 3300031733 Ga0316577_10011022 Ga0316577_100110224 345
46 3300032137 Ga0316585_10009341 Ga0316585_100093413 345
47 3300035398 Ga0316574_0002629 Ga0316574_0002629_7035_8108 345
48 3300036712 Ga0316584_0051543 Ga0316584_0051543_836_1909 345
49 3300038725 Ga0400484_08437 Ga0400484_08437_75_1193 345
50 3300044712 Ga0453684_0002378 Ga0453684_0002378_31705_32763 345
51 3300044712 Ga0453684_0003083 Ga0453684_0003083_22194_23270 345
52 3300044712 Ga0453684_0003802 Ga0453684_0003802_7319_8443 345
53 3300044712 Ga0453684_0018085 Ga0453684_0018085_2603_3673 345
54 3300044712 Ga0453684_0028871 Ga0453684_0028871_4534_5604 345
55 3300044712 Ga0453684_0169026 Ga0453684_0169026_615_1694 345
56 iso_pu_bacteria 2744054657 2745169293 345
57 iso_pu_bacteria 2816332336 2817617010 345
58 iso_pu_bacteria 2857472729 2857475192 345
59 iso_pu_bacteria 2898907183 2898909609 345
60 3300031691 Ga0316579_10064328 Ga0316579_100643282 346
61 3300031728 Ga0316578_10000514 Ga0316578_100005146 346
62 3300031733 Ga0316577_10000004 Ga0316577_1000000416 346
63 3300031733 Ga0316577_10007758 Ga0316577_100077583 346
64 3300036647 Ga0316582_0035166 Ga0316582_0035166_1766_2989 346
65 3300036712 Ga0316584_0016827 Ga0316584_0016827_231_1454 346
66 3300003758 Ga0055532_1000546 Ga0055532_10005469 347
67 3300005467 Ga0070706_100128116 Ga0070706_1001281162 347
68 3300005471 Ga0070698_100112111 Ga0070698_1001121112 347
69 3300005518 Ga0070699_100009114 Ga0070699_1000091146 347
70 3300005577 Ga0068857_100079446 Ga0068857_1000794463 347
71 3300006847 Ga0075431_100057556 Ga0075431_1000575562 347
72 3300006880 Ga0075429_100011813 Ga0075429_1000118136 347
73 3300006880 Ga0075429_100062059 Ga0075429_1000620592 347
74 3300009147 Ga0114129_10044619 Ga0114129_100446196 347
75 3300009147 Ga0114129_10068181 Ga0114129_100681812 347
76 3300025229 Ga0209147_100029 Ga0209147_10002963 347
77 3300025910 Ga0207684_10312039 Ga0207684_103120392 347
78 3300050507 nmdc:mga05p37_220357_c1 nmdc:mga05p37_220357_c1_529_1593 347
79 3300050508 nmdc:mga09592_62006_c1 nmdc:mga09592_62006_c1_698_1762 347
80 iso_pu_bacteria 2510917027 2511176371 347
81 iso_pu_bacteria 2512564013 2512641489 347
82 iso_pu_bacteria 2857460504 2857463299 347
83 iso_pu_bacteria 2857465823 2857468497 347
84 iso_pu_bacteria 2857591370 2857597142 347
85 iso_pu_bacteria 2915597211 2915599576 347
86 iso_pu_bacteria 2915606848 2915612262 347
87 iso_pu_bacteria 2929183550 2929184733 347
88 3300005295 Ga0065707_10087058 Ga0065707_100870587 348
89 3300005617 Ga0068859_100067924 Ga0068859_1000679244 348
90 3300006844 Ga0075428_100206735 Ga0075428_1002067353 348
91 3300006847 Ga0075431_100015776 Ga0075431_1000157762 348
92 3300006880 Ga0075429_100050102 Ga0075429_1000501022 348
93 3300006880 Ga0075429_100147810 Ga0075429_1001478102 348
94 3300006931 Ga0097620_100067923 Ga0097620_1000679232 348
95 3300054114 Ga0501084_0110127 Ga0501084_0110127_330_1391 349
96 3300045051 Ga0451576_0137382 Ga0451576_0137382_1318_2379 352
97 3300009148 Ga0105243_10326652 Ga0105243_103266521 354
98 3300026116 Ga0207674_10258165 Ga0207674_102581652 354
99 3300031903 Ga0307407_10067256 Ga0307407_100672562 354
100 2162886007 SwRhRL2b_contig_2852374 SwRhRL2b_0154.00001650 355
101 3300005289 Ga0065704_10000260 Ga0065704_1000026026 355
102 3300005295 Ga0065707_10000492 Ga0065707_1000049247 355
103 3300005444 Ga0070694_100085845 Ga0070694_1000858452 355
104 3300005467 Ga0070706_100468964 Ga0070706_1004689641 355
105 3300009147 Ga0114129_10048290 Ga0114129_100482902 355
106 3300048909 Ga0496106_0277263 Ga0496106_0277263_46_1143 355
107 3300050507 nmdc:mga05p37_24192_c1 nmdc:mga05p37_24192_c1_4913_6013 355

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10576

EndIII_4Fe-2S

Iron-sulfur binding domain of endonuclease III

211

227

1

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

59

193

0.94

PF14815

NUDIX_4

NUDIX domain

255

397

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kn9-assembly1.cif.gz_A muty n-terminal domain in complex with dna containing an intrahelical oxog:a base-pair 0.9644 5 222
1kg6-assembly1.cif.gz_A crystal structure of the k142r mutant of e.coli muty (core fragment) 0.9624 4 223
1kg4-assembly1.cif.gz_A crystal structure of the k142a mutant of e. coli muty (core fragment) 0.9623 4 223
1kg7-assembly1.cif.gz_A crystal structure of the e161a mutant of e.coli muty (core fragment) 0.9619 4 223
1kg3-assembly1.cif.gz_A crystal structure of the core fragment of muty from e.coli at 1.55a resolution 0.9611 4 223
ID Description Score Start End Superfamily
1rrqA02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9682 18 131 1.10.340.30
3fspA01 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.9639 134 227 1.10.1670.10
1kg2A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9601 18 130 1.10.340.30
1rrqA02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9598 18 131 1.10.340.30
af_A0A1D6IX31_1_95_1.10.1670.10 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.9507 39 133 1.10.1670.10
ID Description Score Start End GO Terms
AF-T1BBA5-F1-model_v4 Adenine DNA glycosylase 0.9819 49 213 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A6L5DGX0-F1-model_v4 deleted 0.9763 55 156
AF-A0A7C7RY82-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9751 1 215 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-H6CEG9-F1-model_v4 deleted 0.9751 4 219
AF-A0A846E5L5-F1-model_v4 A/G-specific adenine glycosylase 0.9751 4 181 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051536

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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