F041038
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 107 | 84 | 105 | 200 |
Family's Representative Sequence
| Representative Sequence | 3300003323|rootH1_10027789|rootH1_100277897 |
| Length | 242 |
| Sequence | VSQKLLCLTRGAVHNLSPKFKSGASVWRDLANHPPSDTSHFAGCDMDQTYNINGGFKPTAKRFADLSGPDFFPTPSWATHALIENERFSGDIWESACGNGAMSKVLEMASPSVRSSDLYDRGFGEAGLDFLDATYRAENIITNPPYNAAEGFVKSGVRLARKKFALLLRLAFLEGANRANTIFSEIPPSRVWVFSERITFYPAGAVQQGSGTTAYAWFVWDKDAQGSTELKWFKPGYKARFG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2511231028 | Bradyrhizobium sp. YR681 | Isolate | Rhizosphere |
| 2 | 2513237104 | Bradyrhizobium sp. EC3.3 | Isolate | Nodule |
| 3 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 4 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 5 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 6 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 7 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 8 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 9 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 16 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 18 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 19 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 20 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 21 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 22 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 23 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 24 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 25 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 35 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 36 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 37 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 38 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 39 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 40 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 41 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 56 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 57 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 58 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 59 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 60 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 61 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 62 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 63 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 64 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 65 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 66 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 67 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 68 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 69 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 70 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 72 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 73 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 74 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 75 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 76 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 77 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 78 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 79 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 80 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 81 | 3300053105 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere | Metagenome | Endosphere |
| 82 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 83 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 84 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.13 |
| Metatranscriptomes | 0 |
| Isolates | 1.87 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 19.63 |
| Nodule | 0.93 |
| Rhizoplane | 0 |
| Rhizosphere | 70.09 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.35 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10022410 | 3300001979 | Bacteria | 2174 |
| 2 | rootH2_10258501 | 3300003320 | Bacteria | 1388 |
| 3 | rootH2_10269065 | 3300003320 | Bacteria | 1423 |
| 4 | rootL2_10000885 | 3300003322 | Bacteria | 3796 |
| 5 | rootH1_10027789 | 3300003323 | Bacteria | 8165 |
| 6 | rootH1_10115032 | 3300003323 | Bacteria | 2698 |
| 7 | Ga0055526_1001459 | 3300003771 | Bacteria | 16780 |
| 8 | Ga0055524_1000283 | 3300003775 | Bacteria | 49569 |
| 9 | Ga0070658_10034854 | 3300005327 | Bacteria | 4051 |
| 10 | Ga0070676_10207501 | 3300005328 | Bacteria | 1287 |
| 11 | Ga0070660_100037675 | 3300005339 | Bacteria | 3665 |
| 12 | Ga0070660_100048661 | 3300005339 | Bacteria | 3256 |
| 13 | Ga0070668_100911632 | 3300005347 | Bacteria | 786 |
| 14 | Ga0070659_100001415 | 3300005366 | Bacteria | 17307 |
| 15 | Ga0070659_100055157 | 3300005366 | Bacteria | 3131 |
| 16 | Ga0070659_100080131 | 3300005366 | Bacteria | 2607 |
| 17 | Ga0070711_100000112 | 3300005439 | Bacteria | 42547 |
| 18 | Ga0068853_100003119 | 3300005539 | Bacteria | 12678 |
| 19 | Ga0070665_100002896 | 3300005548 | Bacteria | 18545 |
| 20 | Ga0070665_100150622 | 3300005548 | Bacteria | 2329 |
| 21 | Ga0068855_100200840 | 3300005563 | Unclassified | 2244 |
| 22 | Ga0068855_101138125 | 3300005563 | Unclassified | 814 |
| 23 | Ga0068857_100042947 | 3300005577 | Bacteria | 4010 |
| 24 | Ga0068857_100084793 | 3300005577 | Bacteria | 2831 |
| 25 | Ga0068864_100416985 | 3300005618 | Bacteria | 1279 |
| 26 | Ga0068851_10135879 | 3300005834 | Bacteria | 1333 |
| 27 | Ga0068863_100017311 | 3300005841 | Bacteria | 6911 |
| 28 | Ga0068863_100063943 | 3300005841 | Bacteria | 3480 |
| 29 | Ga0081539_10017754 | 3300005985 | Unclassified | 4976 |
| 30 | Ga0075366_10022507 | 3300006195 | Bacteria | 3667 |
| 31 | Ga0075366_10095654 | 3300006195 | Bacteria | 1781 |
| 32 | Ga0075370_10000012 | 3300006353 | Bacteria | 64975 |
| 33 | Ga0105247_10356056 | 3300009101 | Bacteria | 1031 |
| 34 | Ga0105237_10031117 | 3300009545 | Bacteria | 5412 |
| 35 | Ga0105238_10232290 | 3300009551 | Bacteria | 1821 |
| 36 | Ga0105249_10137462 | 3300009553 | Bacteria | 2340 |
| 37 | Ga0157373_10072940 | 3300013100 | Bacteria | 2423 |
| 38 | Ga0157371_10078300 | 3300013102 | Bacteria | 2342 |
| 39 | Ga0157371_10131844 | 3300013102 | Bacteria | 1778 |
| 40 | Ga0157369_10053248 | 3300013105 | Bacteria | 4375 |
| 41 | Ga0157374_10014189 | 3300013296 | Bacteria | 6966 |
| 42 | Ga0157372_10244283 | 3300013307 | Bacteria | 2083 |
| 43 | Ga0213872_10027491 | 3300021361 | Bacteria | 2611 |
| 44 | Ga0209759_1026673 | 3300025256 | Unclassified | 1206 |
| 45 | Ga0209673_1016371 | 3300025273 | Bacteria | 2776 |
| 46 | Ga0209675_1000983 | 3300025291 | Bacteria | 18047 |
| 47 | Ga0209564_1000015 | 3300025295 | Bacteria | 615324 |
| 48 | Ga0209050_1002603 | 3300025298 | Bacteria | 14950 |
| 49 | Ga0209256_1000062 | 3300025299 | Bacteria | 253433 |
| 50 | Ga0207645_10101638 | 3300025907 | Bacteria | 1855 |
| 51 | Ga0207705_10170253 | 3300025909 | Bacteria | 1640 |
| 52 | Ga0207671_10004305 | 3300025914 | Bacteria | 13684 |
| 53 | Ga0207663_10000254 | 3300025916 | Bacteria | 23221 |
| 54 | Ga0207657_10061421 | 3300025919 | Bacteria | 3222 |
| 55 | Ga0207657_10073131 | 3300025919 | Bacteria | 2898 |
| 56 | Ga0207644_10556189 | 3300025931 | Bacteria | 950 |
| 57 | Ga0207690_10001225 | 3300025932 | Bacteria | 16196 |
| 58 | Ga0207690_10015417 | 3300025932 | Bacteria | 4631 |
| 59 | Ga0207690_10019493 | 3300025932 | Bacteria | 4179 |
| 60 | Ga0207712_10146678 | 3300025961 | Bacteria | 1817 |
| 61 | Ga0207639_10008287 | 3300026041 | Bacteria | 7121 |
| 62 | Ga0207639_10074982 | 3300026041 | Bacteria | 2658 |
| 63 | Ga0207641_10015078 | 3300026088 | Bacteria | 6334 |
| 64 | Ga0207641_10171053 | 3300026088 | Unclassified | 1983 |
| 65 | Ga0207676_10512970 | 3300026095 | Bacteria | 1140 |
| 66 | Ga0207674_10136119 | 3300026116 | Bacteria | 2418 |
| 67 | Ga0268266_10002734 | 3300028379 | Bacteria | 18451 |
| 68 | Ga0268266_10252306 | 3300028379 | Bacteria | 1632 |
| 69 | Ga0268264_11069365 | 3300028381 | Bacteria | 815 |
| 70 | Ga0307517_10005669 | 3300028786 | Bacteria | 18717 |
| 71 | Ga0265338_10188172 | 3300028800 | Bacteria | 1567 |
| 72 | Ga0265328_10000006 | 3300031239 | Bacteria | 227698 |
| 73 | Ga0265331_10002362 | 3300031250 | Bacteria | 12814 |
| 74 | Ga0265327_10029697 | 3300031251 | Bacteria | 3105 |
| 75 | Ga0265316_10000333 | 3300031344 | Bacteria | 52789 |
| 76 | Ga0307412_10006039 | 3300031911 | Bacteria | 6819 |
| 77 | Ga0395899_0010458 | 3300037312 | Bacteria | 7107 |
| 78 | Ga0395900_0042841 | 3300037418 | Bacteria | 4663 |
| 79 | Ga0395900_0378429 | 3300037418 | Bacteria | 1384 |
| 80 | Ga0395898_0062806 | 3300037466 | Unclassified | 3606 |
| 81 | Ga0395905_0020339 | 3300037471 | Bacteria | 6288 |
| 82 | Ga0436364_0779263 | 3300037853 | Unclassified | 985 |
| 83 | Ga0395901_0405005 | 3300038443 | Bacteria | 1401 |
| 84 | Ga0395901_0468504 | 3300038443 | Bacteria | 1286 |
| 85 | Ga0395901_0725760 | 3300038443 | Unclassified | 989 |
| 86 | Ga0436361_0978353 | 3300039447 | Bacteria | 2896 |
| 87 | Ga0466967_0808708 | 3300045976 | Bacteria | 931 |
| 88 | Ga0495606_0064830 | 3300046507 | Unclassified | 2323 |
| 89 | Ga0496116_0005846 | 3300048919 | Bacteria | 11302 |
| 90 | Ga0496117_0215955 | 3300048920 | Unclassified | 1071 |
| 91 | Ga0501034_0077909 | 3300049571 | Bacteria | 3320 |
| 92 | Ga0501046_0011286 | 3300049580 | Bacteria | 7646 |
| 93 | Ga0501047_0001925 | 3300049581 | Bacteria | 19957 |
| 94 | Ga0501225_0062444 | 3300049705 | Bacteria | 1049 |
| 95 | nmdc:mga0k408_23403_c1 | 3300050493 | Bacteria | 3484 |
| 96 | nmdc:mga0k408_87873_c1 | 3300050493 | Bacteria | 1826 |
| 97 | nmdc:mga07m45_1_c1 | 3300050496 | Bacteria | 485809 |
| 98 | Ga0500635_0006614 | 3300053080 | Bacteria | 3102 |
| 99 | Ga0500643_011376 | 3300053087 | Bacteria | 3250 |
| 100 | Ga0500557_024295 | 3300053105 | Bacteria | 1771 |
| 101 | Ga0500595_006900 | 3300053119 | Bacteria | 4766 |
| 102 | Ga0500595_007044 | 3300053119 | Bacteria | 4705 |
| 103 | Ga0500595_034532 | 3300053119 | Bacteria | 1672 |
| 104 | Ga0500652_187785 | 3300053131 | Bacteria | 844 |
| 105 | Ga0500590_096712 | 3300053148 | Bacteria | 1424 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | iso_pu_bacteria | 2511231028 | 2511400332 | 194 |
| 2 | iso_pu_bacteria | 2513237104 | 2513722962 | 194 |
| 3 | 3300003320 | rootH2_10258501 | rootH2_102585012 | 196 |
| 4 | 3300001979 | JGI24740J21852_10022410 | JGI24740J21852_100224102 | 197 |
| 5 | 3300003320 | rootH2_10269065 | rootH2_102690652 | 197 |
| 6 | 3300003322 | rootL2_10000885 | rootL2_100008855 | 197 |
| 7 | 3300003323 | rootH1_10027789 | rootH1_100277897 | 197 |
| 8 | 3300003323 | rootH1_10115032 | rootH1_101150323 | 197 |
| 9 | 3300003771 | Ga0055526_1001459 | Ga0055526_100145912 | 197 |
| 10 | 3300003775 | Ga0055524_1000283 | Ga0055524_100028340 | 197 |
| 11 | 3300005327 | Ga0070658_10034854 | Ga0070658_100348542 | 197 |
| 12 | 3300005328 | Ga0070676_10207501 | Ga0070676_102075012 | 197 |
| 13 | 3300005339 | Ga0070660_100037675 | Ga0070660_1000376755 | 197 |
| 14 | 3300005339 | Ga0070660_100048661 | Ga0070660_1000486612 | 197 |
| 15 | 3300005347 | Ga0070668_100911632 | Ga0070668_1009116321 | 197 |
| 16 | 3300005366 | Ga0070659_100001415 | Ga0070659_1000014154 | 197 |
| 17 | 3300005366 | Ga0070659_100055157 | Ga0070659_1000551572 | 197 |
| 18 | 3300005366 | Ga0070659_100080131 | Ga0070659_1000801312 | 197 |
| 19 | 3300005439 | Ga0070711_100000112 | Ga0070711_10000011223 | 197 |
| 20 | 3300005539 | Ga0068853_100003119 | Ga0068853_1000031195 | 197 |
| 21 | 3300005548 | Ga0070665_100002896 | Ga0070665_10000289619 | 197 |
| 22 | 3300005548 | Ga0070665_100150622 | Ga0070665_1001506222 | 197 |
| 23 | 3300005563 | Ga0068855_100200840 | Ga0068855_1002008403 | 197 |
| 24 | 3300005563 | Ga0068855_101138125 | Ga0068855_1011381252 | 197 |
| 25 | 3300005577 | Ga0068857_100042947 | Ga0068857_1000429474 | 197 |
| 26 | 3300005577 | Ga0068857_100084793 | Ga0068857_1000847934 | 197 |
| 27 | 3300005618 | Ga0068864_100416985 | Ga0068864_1004169852 | 197 |
| 28 | 3300005834 | Ga0068851_10135879 | Ga0068851_101358792 | 197 |
| 29 | 3300005841 | Ga0068863_100017311 | Ga0068863_1000173119 | 197 |
| 30 | 3300005841 | Ga0068863_100063943 | Ga0068863_1000639435 | 197 |
| 31 | 3300005985 | Ga0081539_10017754 | Ga0081539_1001775410 | 197 |
| 32 | 3300006195 | Ga0075366_10022507 | Ga0075366_100225075 | 197 |
| 33 | 3300006195 | Ga0075366_10095654 | Ga0075366_100956542 | 197 |
| 34 | 3300006353 | Ga0075370_10000012 | Ga0075370_1000001258 | 197 |
| 35 | 3300009101 | Ga0105247_10356056 | Ga0105247_103560561 | 197 |
| 36 | 3300009545 | Ga0105237_10031117 | Ga0105237_100311177 | 197 |
| 37 | 3300009551 | Ga0105238_10232290 | Ga0105238_102322902 | 197 |
| 38 | 3300009553 | Ga0105249_10137462 | Ga0105249_101374622 | 197 |
| 39 | 3300013100 | Ga0157373_10072940 | Ga0157373_100729401 | 197 |
| 40 | 3300013102 | Ga0157371_10078300 | Ga0157371_100783002 | 197 |
| 41 | 3300013102 | Ga0157371_10131844 | Ga0157371_101318441 | 197 |
| 42 | 3300013105 | Ga0157369_10053248 | Ga0157369_100532483 | 197 |
| 43 | 3300013296 | Ga0157374_10014189 | Ga0157374_100141891 | 197 |
| 44 | 3300013307 | Ga0157372_10244283 | Ga0157372_102442833 | 197 |
| 45 | 3300021361 | Ga0213872_10027491 | Ga0213872_100274912 | 197 |
| 46 | 3300025256 | Ga0209759_1026673 | Ga0209759_10266731 | 197 |
| 47 | 3300025273 | Ga0209673_1016371 | Ga0209673_10163712 | 197 |
| 48 | 3300025291 | Ga0209675_1000983 | Ga0209675_100098319 | 197 |
| 49 | 3300025295 | Ga0209564_1000015 | Ga0209564_1000015226 | 197 |
| 50 | 3300025298 | Ga0209050_1002603 | Ga0209050_10026038 | 197 |
| 51 | 3300025299 | Ga0209256_1000062 | Ga0209256_1000062241 | 197 |
| 52 | 3300025907 | Ga0207645_10101638 | Ga0207645_101016382 | 197 |
| 53 | 3300025909 | Ga0207705_10170253 | Ga0207705_101702533 | 197 |
| 54 | 3300025914 | Ga0207671_10004305 | Ga0207671_100043058 | 197 |
| 55 | 3300025916 | Ga0207663_10000254 | Ga0207663_1000025426 | 197 |
| 56 | 3300025919 | Ga0207657_10061421 | Ga0207657_100614213 | 197 |
| 57 | 3300025919 | Ga0207657_10073131 | Ga0207657_100731313 | 197 |
| 58 | 3300025931 | Ga0207644_10556189 | Ga0207644_105561891 | 197 |
| 59 | 3300025932 | Ga0207690_10001225 | Ga0207690_100012252 | 197 |
| 60 | 3300025932 | Ga0207690_10015417 | Ga0207690_100154176 | 197 |
| 61 | 3300025932 | Ga0207690_10019493 | Ga0207690_100194932 | 197 |
| 62 | 3300025961 | Ga0207712_10146678 | Ga0207712_101466781 | 197 |
| 63 | 3300026041 | Ga0207639_10008287 | Ga0207639_100082875 | 197 |
| 64 | 3300026041 | Ga0207639_10074982 | Ga0207639_100749823 | 197 |
| 65 | 3300026088 | Ga0207641_10015078 | Ga0207641_100150782 | 197 |
| 66 | 3300026088 | Ga0207641_10171053 | Ga0207641_101710532 | 197 |
| 67 | 3300026095 | Ga0207676_10512970 | Ga0207676_105129702 | 197 |
| 68 | 3300026116 | Ga0207674_10136119 | Ga0207674_101361191 | 197 |
| 69 | 3300028379 | Ga0268266_10002734 | Ga0268266_100027343 | 197 |
| 70 | 3300028379 | Ga0268266_10252306 | Ga0268266_102523061 | 197 |
| 71 | 3300028381 | Ga0268264_11069365 | Ga0268264_110693651 | 197 |
| 72 | 3300028786 | Ga0307517_10005669 | Ga0307517_1000566917 | 197 |
| 73 | 3300028800 | Ga0265338_10188172 | Ga0265338_101881723 | 197 |
| 74 | 3300031239 | Ga0265328_10000006 | Ga0265328_1000000635 | 197 |
| 75 | 3300031250 | Ga0265331_10002362 | Ga0265331_1000236210 | 197 |
| 76 | 3300031251 | Ga0265327_10029697 | Ga0265327_100296974 | 197 |
| 77 | 3300031344 | Ga0265316_10000333 | Ga0265316_1000033335 | 197 |
| 78 | 3300031911 | Ga0307412_10006039 | Ga0307412_100060394 | 197 |
| 79 | 3300037312 | Ga0395899_0010458 | Ga0395899_0010458_4639_5238 | 197 |
| 80 | 3300037418 | Ga0395900_0042841 | Ga0395900_0042841_1334_1933 | 197 |
| 81 | 3300037418 | Ga0395900_0378429 | Ga0395900_0378429_242_841 | 197 |
| 82 | 3300037466 | Ga0395898_0062806 | Ga0395898_0062806_2076_2675 | 197 |
| 83 | 3300037471 | Ga0395905_0020339 | Ga0395905_0020339_660_1253 | 197 |
| 84 | 3300037853 | Ga0436364_0779263 | Ga0436364_0779263_202_849 | 197 |
| 85 | 3300038443 | Ga0395901_0405005 | Ga0395901_0405005_267_866 | 197 |
| 86 | 3300038443 | Ga0395901_0468504 | Ga0395901_0468504_492_1091 | 197 |
| 87 | 3300038443 | Ga0395901_0725760 | Ga0395901_0725760_233_880 | 197 |
| 88 | 3300039447 | Ga0436361_0978353 | Ga0436361_0978353_726_1319 | 197 |
| 89 | 3300045976 | Ga0466967_0808708 | Ga0466967_0808708_95_742 | 197 |
| 90 | 3300046507 | Ga0495606_0064830 | Ga0495606_0064830_1037_1630 | 197 |
| 91 | 3300048919 | Ga0496116_0005846 | Ga0496116_0005846_4186_4806 | 197 |
| 92 | 3300048920 | Ga0496117_0215955 | Ga0496117_0215955_140_733 | 197 |
| 93 | 3300049571 | Ga0501034_0077909 | Ga0501034_0077909_1066_1659 | 197 |
| 94 | 3300049580 | Ga0501046_0011286 | Ga0501046_0011286_1851_2444 | 197 |
| 95 | 3300049581 | Ga0501047_0001925 | Ga0501047_0001925_2647_3240 | 197 |
| 96 | 3300049705 | Ga0501225_0062444 | Ga0501225_0062444_143_736 | 197 |
| 97 | 3300050493 | nmdc:mga0k408_23403_c1 | nmdc:mga0k408_23403_c1_1319_1912 | 197 |
| 98 | 3300050493 | nmdc:mga0k408_87873_c1 | nmdc:mga0k408_87873_c1_792_1415 | 197 |
| 99 | 3300050496 | nmdc:mga07m45_1_c1 | nmdc:mga07m45_1_c1_475722_476315 | 197 |
| 100 | 3300053080 | Ga0500635_0006614 | Ga0500635_0006614_1259_1894 | 197 |
| 101 | 3300053087 | Ga0500643_011376 | Ga0500643_011376_876_1472 | 197 |
| 102 | 3300053105 | Ga0500557_024295 | Ga0500557_024295_169_765 | 197 |
| 103 | 3300053119 | Ga0500595_006900 | Ga0500595_006900_579_1190 | 197 |
| 104 | 3300053119 | Ga0500595_007044 | Ga0500595_007044_3573_4169 | 197 |
| 105 | 3300053119 | Ga0500595_034532 | Ga0500595_034532_43_654 | 197 |
| 106 | 3300053131 | Ga0500652_187785 | Ga0500652_187785_151_744 | 197 |
| 107 | 3300053148 | Ga0500590_096712 | Ga0500590_096712_392_985 | 197 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3g2m-assembly1.cif.gz_B | crystal structure of the glycopeptide n-methyltransferase mtfa | 0.7728 | 31 | 124 |
| 3g2q-assembly1.cif.gz_A | crystal structure of the glycopeptide n-methyltransferase mtfa complexed with sinefungin | 0.7612 | 28 | 124 |
| 5z9o-assembly2.cif.gz_B | the crystal structure of cyclopropane-fatty-acyl-phospholipid synthase from lactobacillus acidophilus | 0.761 | 31 | 122 |
| 3g2o-assembly1.cif.gz_A | crystal structure of the glycopeptide n-methyltransferase mtfa complexed with (s)-adenosyl-l-methionine (sam) | 0.7593 | 30 | 124 |
| 3g2p-assembly1.cif.gz_A | crystal structure of the glycopeptide n-methyltransferase mtfa complexed with (s)-adenosyl-l-homocysteine (sah) | 0.7448 | 28 | 124 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WLY7_8_274_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.7783 | 31 | 126 | 3.40.50.150 |
| af_Q7TNK6_189_382_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.7732 | 29 | 101 | 3.40.50.150 |
| af_Q553T0_166_421_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.7647 | 31 | 115 | 3.40.50.150 |
| af_P9WLY9_5_208_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.7348 | 31 | 115 | 3.40.50.150 |
| 5gm2M00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.7306 | 33 | 122 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A0A3XXJ2-F1-model_v4 | Methyltransferase | 0.9492 | 15 | 197 |
GO:0003676
GO:0008168 GO:0032259 |
| AF-A0A0A3XXJ2-F1-model_v4 | Methyltransferase | 0.9442 | 15 | 197 |
GO:0003676
GO:0008168 GO:0032259 |
| AF-A0A350P1U6-F1-model_v4 | Uncharacterized protein | 0.9327 | 25 | 164 |
GO:0003676
GO:0008168 GO:0032259 |
| AF-Q1N861-F1-model_v4 | Uncharacterized protein | 0.931 | 57 | 197 |
GO:0003676
GO:0008168 GO:0032259 |
| AF-Q1N861-F1-model_v4 | Uncharacterized protein | 0.9248 | 57 | 197 |
GO:0003676
GO:0008168 GO:0032259 |
Predicted Structure (AlphaFold2)
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