F040400

General Info

Members Datasets Scaffolds Average Seq Length
106 92 85 766

Family's Representative Sequence

Representative Sequence 3300053094|Ga0500566_0001520|Ga0500566_0001520_5316_7940
Length 838
Sequence MTRADSETMEAVTPLGVPRESSRAPSIHANGTGTAPVLRDEDLADDADDALRGTRPPIAIPATHGPFSIEIRVRGRVQGVGFRPAVWKLARELGVSGEVLNDAGGVLIRAGGEPGLLAAFIARLGNERPQLARVESFETRSFHGALPEEFRIVPSEGGAVRTQVAPDAAICEACAADVLDPFSRRYRYPFTTCTQCGPRLSVVTGIPYDRSATTLAERYDGRAVRVEQLSTLDAVDAVSSLLARGEIVAIKGLGGYQLACDATRPEVVAKLRAAKHRDHKPFALMARSIEVIRRYCSPDAIETAMLASPEAPIVVMAASRPDELPPGVAPGLATLGFMLPTTPLHRLILRTLDRPVVMTSGNLADEPQAIDDADAARRLAGIASYALIHDRPIANRVDDSVVRIADGAVRVVRRARGYAPAAIKLPAGFERAPSLLAYGGDLRATFCLVERGEAILSQHQGDLEDPATRADYDRNLAVYTAMFEHVPAAIAADHHPELHTTRLARDHGLAAELPVIEVQHHHAHIASCLVDNGRPLAAPPVLGVVLDGIGLGDDGAMWGGEFLLADYRRARRLATFKPVAMLGGDRASREPWRNLYAHVVEELGWPAFTAKFAELEVHAQLAGKQRPLLDAMLASRVGVRPASSCGRLFDAVAAAVGICFDHQSYDGEAAARLESAVDPHALDEGDELAYPFAIARLPGTSLPYIEPLAMWNALFGDLSLGAPVGVIAARFHRGLSRAVAQMVVKLARPSGGLPMFDTVALSGGCFQNRILLEQCARRLRAVGFTVLAHTQVPTSDGGLALGQAAVCAAQMLDDDGLARGSTLSRLPVIGDGEFDPLA

Samples

Sample ID Description Type Environment
1 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
2 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
3 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
4 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
5 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
6 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
7 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
8 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
9 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
10 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
11 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
12 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
13 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
14 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
15 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
16 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
17 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
18 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
19 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
20 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
51 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
52 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
53 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
56 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
57 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
58 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
62 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
63 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
64 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
65 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
66 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
67 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
72 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
75 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
76 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
77 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
78 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
79 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
80 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
81 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
82 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
83 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
84 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
85 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
86 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
87 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
88 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
89 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified
90 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
91 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
92 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.25
Metatranscriptomes 0.94
Isolates 19.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.55
Nodule 10.38
Rhizoplane 0
Rhizosphere 63.21
Stem 0
Stem Tuber 0
Unclassified 18.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000028 3300002074 Bacteria 91962
2 JGI24034J26672_10000058 3300002239 Bacteria 41887
3 Ga0070676_10009021 3300005328 Bacteria 5395
4 Ga0070667_100000179 3300005367 Bacteria 77442
5 Ga0070678_100017569 3300005456 Bacteria 4612
6 Ga0068853_100016880 3300005539 Bacteria 6016
7 Ga0070665_100000266 3300005548 Bacteria 85554
8 Ga0070665_100016691 3300005548 Bacteria 7358
9 Ga0070665_100085184 3300005548 Bacteria 3166
10 Ga0068856_100026066 3300005614 Bacteria 5701
11 Ga0068859_100057446 3300005617 Bacteria 3920
12 Ga0068858_100000298 3300005842 Bacteria 53388
13 Ga0081540_1019689 3300005983 Bacteria 4089
14 Ga0097620_100057444 3300006931 Bacteria 3920
15 Ga0105240_10001696 3300009093 Bacteria 37333
16 Ga0105245_10064792 3300009098 Bacteria 3303
17 Ga0105247_10000047 3300009101 Bacteria 151385
18 Ga0105237_10007177 3300009545 Bacteria 12239
19 Ga0105239_10001665 3300010375 Bacteria 29281
20 Ga0105239_10058434 3300010375 Bacteria 4232
21 Ga0182008_10010680 3300014497 Bacteria 4909
22 Ga0157377_10000060 3300014745 Bacteria 82791
23 Ga0157379_10008830 3300014968 Bacteria 8789
24 Ga0207710_10000001 3300025900 Bacteria 1797433
25 Ga0207695_10005462 3300025913 Bacteria 16837
26 Ga0207671_10009033 3300025914 Bacteria 8384
27 Ga0207693_10010295 3300025915 Bacteria 7590
28 Ga0207687_10037346 3300025927 Bacteria 3313
29 Ga0207640_10001815 3300025981 Bacteria 11459
30 Ga0207658_10002976 3300025986 Bacteria 12112
31 Ga0207703_10001479 3300026035 Bacteria 21419
32 Ga0207702_10037852 3300026078 Bacteria 4040
33 Ga0207674_10009956 3300026116 Bacteria 10817
34 Ga0268266_10000006 3300028379 Bacteria 1410021
35 Ga0265338_10036439 3300028800 Bacteria 4707
36 Ga0307509_10000016 3300031507 Bacteria 266991
37 Ga0307509_10000069 3300031507 Bacteria 141246
38 Ga0307508_10007349 3300031616 Bacteria 10261
39 Ga0316579_10001463 3300031691 Bacteria 8591
40 Ga0316579_10002063 3300031691 Bacteria 7530
41 Ga0307516_10012661 3300031730 Bacteria 9070
42 Ga0307406_10011563 3300031901 Bacteria 5015
43 Ga0316596_1001421 3300033541 Bacteria 4819
44 Ga0373936_0000042 3300035113 Bacteria 94182
45 Ga0373961_0000066 3300035241 Bacteria 57564
46 Ga0316574_0002776 3300035398 Bacteria 8884
47 Ga0316574_0012152 3300035398 Bacteria 4918
48 Ga0373933_0002822 3300035724 Bacteria 9706
49 Ga0373937_0002589 3300036401 Bacteria 15052
50 Ga0316582_0007858 3300036647 Bacteria 5698
51 Ga0316584_0011953 3300036712 Bacteria 6114
52 Ga0316584_0024516 3300036712 Bacteria 4415
53 Ga0316584_0049770 3300036712 Bacteria 3133
54 Ga0436364_0395559 3300037853 Bacteria 3143
55 Ga0400486_22137 3300038742 Bacteria 3557
56 Ga0400486_27372 3300038742 Bacteria 3595
57 Ga0400486_31373 3300038742 Bacteria 3799
58 Ga0436360_0665768 3300039438 Bacteria 8498
59 Ga0436360_0795680 3300039438 Bacteria 5332
60 Ga0436361_1129178 3300039447 Bacteria 3611
61 Ga0436363_1253189 3300039450 Bacteria 2867
62 Ga0451577_0000483 3300042876 Bacteria 67421
63 Ga0451577_0001708 3300042876 Bacteria 28310
64 Ga0453684_0000194 3300044712 Bacteria 265783
65 Ga0453684_0000261 3300044712 Bacteria 226765
66 Ga0451576_0000649 3300045051 Bacteria 71796
67 Ga0451576_0001569 3300045051 Bacteria 38427
68 Ga0495664_0003168 3300046477 Bacteria 8933
69 Ga0495628_0057869 3300046516 Bacteria 3049
70 Ga0495640_0026273 3300046533 Bacteria 4210
71 Ga0495645_0000500 3300046543 Bacteria 27082
72 Ga0495680_0047238 3300047322 Bacteria 3387
73 Ga0495686_0008861 3300047472 Bacteria 7321
74 Ga0495602_0000143 3300048088 Bacteria 66782
75 Ga0496121_0009135 3300048924 Bacteria 11468
76 Ga0501047_0123041 3300049581 Bacteria 2475
77 Ga0495619_0019799 3300053085 Bacteria 4282
78 Ga0500566_0001520 3300053094 Bacteria 13619
79 Ga0500640_000132 3300053095 Bacteria 14428
80 Ga0500554_000048 3300053102 Bacteria 21032
81 Ga0500572_001013 3300053111 Bacteria 8471
82 Ga0500595_000261 3300053119 Bacteria 34894
83 Ga0500597_015052 3300053120 Bacteria 2916
84 Ga0500614_000201 3300053123 Bacteria 15680
85 Ga0500559_0005129 3300053136 Bacteria 6055

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048924 Ga0496121_0009135 Ga0496121_0009135_9178_11307 641
2 3300036401 Ga0373937_0002589 Ga0373937_0002589_8047_10380 674
3 3300005456 Ga0070678_100017569 Ga0070678_1000175692 681
4 3300031691 Ga0316579_10001463 Ga0316579_100014636 683
5 3300026116 Ga0207674_10009956 Ga0207674_100099564 686
6 3300035724 Ga0373933_0002822 Ga0373933_0002822_2735_5068 687
7 3300014745 Ga0157377_10000060 Ga0157377_1000006024 692
8 3300005548 Ga0070665_100085184 Ga0070665_1000851842 696
9 3300046477 Ga0495664_0003168 Ga0495664_0003168_48_2381 702
10 3300046516 Ga0495628_0057869 Ga0495628_0057869_58_2391 702
11 3300046533 Ga0495640_0026273 Ga0495640_0026273_1145_3478 702
12 3300046543 Ga0495645_0000500 Ga0495645_0000500_19720_22053 702
13 3300047322 Ga0495680_0047238 Ga0495680_0047238_346_2679 702
14 3300048088 Ga0495602_0000143 Ga0495602_0000143_19716_22049 702
15 3300053085 Ga0495619_0019799 Ga0495619_0019799_1733_4066 702
16 3300014497 Ga0182008_10010680 Ga0182008_100106802 703
17 3300005614 Ga0068856_100026066 Ga0068856_1000260664 706
18 3300026078 Ga0207702_10037852 Ga0207702_100378522 706
19 3300039438 Ga0436360_0795680 Ga0436360_0795680_2491_4803 713
20 3300035398 Ga0316574_0002776 Ga0316574_0002776_1188_3572 715
21 3300036647 Ga0316582_0007858 Ga0316582_0007858_2127_4511 715
22 3300036712 Ga0316584_0011953 Ga0316584_0011953_1188_3572 715
23 3300042876 Ga0451577_0001708 Ga0451577_0001708_13113_15407 717
24 3300044712 Ga0453684_0000194 Ga0453684_0000194_191195_193489 717
25 3300045051 Ga0451576_0001569 Ga0451576_0001569_26503_28791 718
26 3300014968 Ga0157379_10008830 Ga0157379_100088303 720
27 3300028800 Ga0265338_10036439 Ga0265338_100364392 722
28 3300047472 Ga0495686_0008861 Ga0495686_0008861_150_2531 722
29 3300031901 Ga0307406_10011563 Ga0307406_100115632 723
30 3300031691 Ga0316579_10002063 Ga0316579_100020635 725
31 3300042876 Ga0451577_0000483 Ga0451577_0000483_55736_58075 725
32 3300044712 Ga0453684_0000261 Ga0453684_0000261_165695_168034 725
33 3300045051 Ga0451576_0000649 Ga0451576_0000649_58728_61067 725
34 3300049581 Ga0501047_0123041 Ga0501047_0123041_23_2368 726
35 3300009098 Ga0105245_10064792 Ga0105245_100647923 730
36 3300025927 Ga0207687_10037346 Ga0207687_100373463 730
37 3300039438 Ga0436360_0665768 Ga0436360_0665768_1618_3987 730
38 3300031507 Ga0307509_10000016 Ga0307509_10000016167 731
39 3300035113 Ga0373936_0000042 Ga0373936_0000042_31878_34310 734
40 3300005983 Ga0081540_1019689 Ga0081540_10196893 735
41 3300039447 Ga0436361_1129178 Ga0436361_1129178_601_3027 735
42 3300039450 Ga0436363_1253189 Ga0436363_1253189_19_2361 735
43 3300005367 Ga0070667_100000179 Ga0070667_10000017951 736
44 3300025986 Ga0207658_10002976 Ga0207658_100029765 736
45 3300005548 Ga0070665_100016691 Ga0070665_1000166913 739
46 iso_pu_bacteria 2874645413 2874651954 739
47 iso_pu_bacteria 2886627955 2886628188 739
48 iso_pu_bacteria 2913912277 2913918271 739
49 3300031616 Ga0307508_10007349 Ga0307508_1000734910 740
50 3300033541 Ga0316596_1001421 Ga0316596_10014211 740
51 3300035398 Ga0316574_0012152 Ga0316574_0012152_573_2945 740
52 iso_pu_bacteria 2617270889 2617914330 740
53 iso_pu_bacteria 642555144 642599680 740
54 iso_pu_bacteria 2913844669 2913849716 741
55 iso_pu_bacteria 2913939268 2913943835 741
56 3300037853 Ga0436364_0395559 Ga0436364_0395559_691_3069 742
57 3300038742 Ga0400486_27372 Ga0400486_27372_465_3020 744
58 3300025915 Ga0207693_10010295 Ga0207693_100102958 745
59 3300036712 Ga0316584_0049770 Ga0316584_0049770_109_2487 745
60 3300036712 Ga0316584_0024516 Ga0316584_0024516_1547_3952 746
61 3300038742 Ga0400486_22137 Ga0400486_22137_647_3058 746
62 3300038742 Ga0400486_31373 Ga0400486_31373_1204_3618 746
63 3300005548 Ga0070665_100000266 Ga0070665_10000026632 747
64 3300010375 Ga0105239_10058434 Ga0105239_100584343 747
65 3300025981 Ga0207640_10001815 Ga0207640_100018154 747
66 3300028379 Ga0268266_10000006 Ga0268266_10000006567 747
67 iso_pu_bacteria 2751185846 2753566813 748
68 3300005617 Ga0068859_100057446 Ga0068859_1000574463 749
69 3300006931 Ga0097620_100057444 Ga0097620_1000574443 749
70 3300053094 Ga0500566_0001520 Ga0500566_0001520_5316_7940 749
71 3300053095 Ga0500640_000132 Ga0500640_000132_8901_11525 749
72 3300053102 Ga0500554_000048 Ga0500554_000048_13777_16401 749
73 3300053111 Ga0500572_001013 Ga0500572_001013_4970_7594 749
74 3300053119 Ga0500595_000261 Ga0500595_000261_6498_9122 749
75 3300053120 Ga0500597_015052 Ga0500597_015052_216_2840 749
76 3300053123 Ga0500614_000201 Ga0500614_000201_7620_10244 749
77 3300053136 Ga0500559_0005129 Ga0500559_0005129_1968_4592 749
78 3300005539 Ga0068853_100016880 Ga0068853_1000168803 750
79 3300009093 Ga0105240_10001696 Ga0105240_1000169617 750
80 3300009545 Ga0105237_10007177 Ga0105237_1000717714 750
81 3300010375 Ga0105239_10001665 Ga0105239_1000166526 750
82 3300025913 Ga0207695_10005462 Ga0207695_1000546214 750
83 3300025914 Ga0207671_10009033 Ga0207671_100090332 750
84 3300035241 Ga0373961_0000066 Ga0373961_0000066_34926_37388 750
85 3300002074 JGI24748J21848_1000028 JGI24748J21848_100002868 753
86 3300002239 JGI24034J26672_10000058 JGI24034J26672_1000005826 753
87 3300005328 Ga0070676_10009021 Ga0070676_100090213 753
88 3300005842 Ga0068858_100000298 Ga0068858_10000029829 753
89 3300009101 Ga0105247_10000047 Ga0105247_10000047124 753
90 3300025900 Ga0207710_10000001 Ga0207710_10000001651 753
91 3300026035 Ga0207703_10001479 Ga0207703_100014794 753
92 3300031507 Ga0307509_10000069 Ga0307509_10000069121 753
93 3300031730 Ga0307516_10012661 Ga0307516_100126614 753
94 iso_pu_bacteria 2508501042 2508693050 753
95 iso_pu_bacteria 2844315083 2844322745 753
96 iso_pu_bacteria 2874590934 2874594183 753
97 iso_pu_bacteria 2876771140 2876773589 753
98 iso_pu_bacteria 2876818435 2876824783 753
99 iso_pu_bacteria 2879074833 2879081510 753
100 iso_pu_bacteria 2903727486 2903734739 753
101 iso_pu_bacteria 2906602504 2906604950 753
102 iso_pu_bacteria 3005594810 3005602659 753
103 iso_pu_bacteria 3005718088 3005725132 753
104 iso_pu_bacteria 8016603502 8016613014 753
105 iso_pu_bacteria 8019565922 8019574425 753
106 iso_pu_bacteria 8056967851 8056976594 753

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01300

Sua5_yciO_yrdC

Telomere recombination

240

415

0.97

PF07503

zf-HYPF

HypF finger

170

203

0.97

PF17788

HypF_C

HypF Kae1-like domain

430

531

0.97

PF00708

Acylphosphatase

Acylphosphatase

69

152

0.91

PF22521

HypF_C_2

Carbamoyltransferase, Kae1-like Domain, second subdomain

543

803

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7chx-assembly2.cif.gz_B acylphosphatase from staphylococcus aureus 0.9294 4 91
3trg-assembly1.cif.gz_A structure of an acylphosphatase from coxiella burnetii 0.9237 4 91
3vth-assembly2.cif.gz_B crystal structure of full-length hypf in the phosphate- and nucleotide-bound form 0.9137 104 745
3tsq-assembly1.cif.gz_A crystal structure of e. coli hypf with atp and carbamoyl phosphate 0.9098 101 753
3tsq-assembly1.cif.gz_A crystal structure of e. coli hypf with atp and carbamoyl phosphate 0.9085 101 753
ID Description Score Start End Superfamily
3vtiB06 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.9602 460 732 3.30.420.560
3vtiB06 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.9513 460 732 3.30.420.560
af_Q2FYM9_1_89_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9411 5 91 3.30.70.100
3vtiB04 Alpha Beta;2-Layer Sandwich;Translation Initiation Factor IF3; 0.9357 228 362 3.30.110.120
3vthB02 Alpha Beta;2-Layer Sandwich;Translation Initiation Factor IF3; 0.9304 226 354 3.30.110.120
ID Description Score Start End GO Terms
AF-F8XT57-F1-model_v4 deleted 0.9889 327 503
AF-A0A2A4NL08-F1-model_v4 HypF Kae1-like domain-containing protein 0.988 299 747 GO:0003725
GO:0008270
GO:0016743
GO:0051604
AF-X1RDZ2-F1-model_v4 Acylphosphatase-like domain-containing protein 0.9849 3 91 GO:0008270
GO:0016743
GO:0051604
AF-A0A7V9N4B8-F1-model_v4 acylphosphatase (EC 3.6.1.7) 0.9839 1 81 GO:0008270
GO:0016743
GO:0016787
GO:0051604
AF-A0A5E6NPM2-F1-model_v4 [NiFe] hydrogenase metallocenter assembly protein HypF 0.9803 200 346 GO:0003725
GO:0008270
GO:0016743
GO:0051604

Feature Viewer

pLDDT pTM Quality
91.39 0.92 High
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Predicted Structure (AlphaFold2)

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