F032044

General Info

Members Datasets Scaffolds Average Seq Length
105 97 94 640

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10099463|Ga0105237_100994632
Length 703
Sequence VLPGLAEICLERVRVELFMDEVIKPAKLKMHSPDLTAEKIRQIAELLPNCVTESRGEDGAVRQAIDFDQLRQELSDHIVEGPAERYRLDWPGKREATLTANAPIAKTLRPCREESVDFDTTKNLFIEGDNLDALKLLQETYLGKVKLIYIDPPYNTGSDLIYDDSFASSIQSYLLSSNQKDESGNRLFTNTESNGRFHSDWLTMLFSRLRLARNLLAEDGVLLISIDDGEIDRLRLMCAEIFGEDNFVAQLTWEKGRKNDAKLFSIGHDYILVYARSKNTLKENGVRWREVKPGADEIQREYLKLKSTFADDFKSIEAGLQKFYSGLPKGNPAKKLSRYGRVDKRGVWRDDNMSWPGGGGPRYDVLHPETHQPCQVPDGGWRYSTLRKMEQMIEEGRVEFRSDHTEPPIRKTYLLRELDPDISVDDDADEDVGIQVAGTYFYRSALQASSLMSELFGTRVFDNPKDHEVLARWIDYTTSGDKDALILDFFSGSGTTGHAVFSLNARDGGNRRFMLVQLPVPLSEDVKSEKEAAQFCRVHGLPLNISEITKERLRRSGASVGSSTPNFFDTGFRVFKIETSNMQDVYYTPDETQQGSLLDHVDNIKPDRTPEDLLFQVLLDWGVDLASPIASETVDRKQVFFVDGNALAACFDFGLTDEFVKQIAERKPLRAVFRDASYSSDAAKINVEQIFKFYSPETDVKCL

Samples

Sample ID Description Type Environment
1 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
2 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
3 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
4 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
5 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
6 2643221593 Lysobacter sp. Root690 Isolate Unclassified
7 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
8 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
9 2952252522 Salinicola sp. DM10 Isolate Unclassified
10 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
29 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
30 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
31 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
33 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
34 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
46 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
47 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
48 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
49 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
50 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
51 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
52 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
53 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
54 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
55 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
56 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
57 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
58 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
59 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
60 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
61 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
62 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
63 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
64 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
65 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
66 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
67 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
68 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
69 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
70 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
71 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
72 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
73 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
74 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
75 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
76 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
77 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
78 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
79 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
80 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
81 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
82 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
83 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
84 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
96 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
97 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.52
Metatranscriptomes 0
Isolates 10.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.62
Nodule 0.95
Rhizoplane 1.9
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 9.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000324 3300003187 Bacteria 51796
2 Ga0070683_100000455 3300005329 Bacteria 28597
3 Ga0070689_100001059 3300005340 Bacteria 17257
4 Ga0070703_10000210 3300005406 Bacteria 27912
5 Ga0070708_100015926 3300005445 Bacteria 6223
6 Ga0070706_100000145 3300005467 Bacteria 89939
7 Ga0070684_100000080 3300005535 Bacteria 63129
8 Ga0070665_100001127 3300005548 Bacteria 32837
9 Ga0068856_100000614 3300005614 Bacteria 39037
10 Ga0068859_100055434 3300005617 Bacteria 3989
11 Ga0068860_100000614 3300005843 Bacteria 42236
12 Ga0068862_100000014 3300005844 Bacteria 251552
13 Ga0075363_100000261 3300006048 Bacteria 15135
14 Ga0097620_100055433 3300006931 Bacteria 3989
15 Ga0105240_10002398 3300009093 Bacteria 30147
16 Ga0105245_10049966 3300009098 Bacteria 3746
17 Ga0105237_10099463 3300009545 Bacteria 2900
18 Ga0157374_10008292 3300013296 Bacteria 8864
19 Ga0157378_10000170 3300013297 Bacteria 62031
20 Ga0182005_1000804 3300015265 Bacteria 14275
21 Ga0163161_10003664 3300017792 Bacteria 10779
22 Ga0163161_10015380 3300017792 Bacteria 5334
23 Ga0209674_100182 3300025226 Bacteria 73560
24 Ga0207425_1000872 3300025245 Bacteria 14751
25 Ga0209675_1001573 3300025291 Bacteria 12940
26 Ga0209676_1011768 3300025292 Bacteria 3499
27 Ga0209025_1000021 3300025294 Bacteria 593083
28 Ga0207653_10000056 3300025885 Bacteria 86527
29 Ga0207684_10000114 3300025910 Bacteria 149844
30 Ga0207695_10004007 3300025913 Bacteria 20284
31 Ga0207687_10035335 3300025927 Bacteria 3398
32 Ga0207670_10000729 3300025936 Bacteria 17286
33 Ga0207661_10000005 3300025944 Bacteria 557888
34 Ga0207702_10002634 3300026078 Bacteria 16849
35 Ga0268265_10000176 3300028380 Bacteria 76619
36 Ga0268264_10000307 3300028381 Bacteria 78736
37 Ga0265338_10012297 3300028800 Bacteria 9769
38 Ga0265332_10000005 3300031238 Bacteria 377525
39 Ga0265327_10001195 3300031251 Bacteria 35135
40 Ga0265327_10004493 3300031251 Bacteria 12320
41 Ga0307509_10032109 3300031507 Bacteria 5789
42 Ga0265314_10002636 3300031711 Bacteria 18081
43 Ga0395899_0001223 3300037312 Bacteria 22492
44 Ga0395900_0002213 3300037418 Bacteria 21717
45 Ga0395898_0000013 3300037466 Bacteria 458788
46 Ga0395898_0001882 3300037466 Bacteria 26783
47 Ga0395898_0058306 3300037466 Bacteria 3759
48 Ga0395905_0034088 3300037471 Bacteria 4780
49 Ga0395901_0001601 3300038443 Bacteria 23439
50 Ga0439447_001536 3300041407 Bacteria 8435
51 Ga0439432_000018 3300042006 Bacteria 61583
52 Ga0466972_0000130 3300044658 Bacteria 63070
53 Ga0453684_0000406 3300044712 Bacteria 177405
54 Ga0495650_0000486 3300046471 Bacteria 60515
55 Ga0495584_0000222 3300046491 Bacteria 41020
56 Ga0495632_0001709 3300046519 Bacteria 17846
57 Ga0495648_0002402 3300046524 Bacteria 17383
58 Ga0495666_0000498 3300046526 Bacteria 17463
59 Ga0495654_0000187 3300046530 Bacteria 60908
60 Ga0495665_0003818 3300046531 Bacteria 8151
61 Ga0495597_0000151 3300046542 Bacteria 61673
62 Ga0495622_0001512 3300046557 Bacteria 11615
63 Ga0495668_0005883 3300046616 Bacteria 8165
64 Ga0495661_0000044 3300046665 Bacteria 148721
65 Ga0495661_0031188 3300046665 Bacteria 3386
66 Ga0495624_0007839 3300046690 Bacteria 7492
67 Ga0495670_0000750 3300046691 Bacteria 15551
68 Ga0495589_0023130 3300046794 Bacteria 3167
69 Ga0495660_0001284 3300046810 Bacteria 17423
70 Ga0495581_0001821 3300047315 Bacteria 11934
71 Ga0495672_0000969 3300047320 Bacteria 29817
72 Ga0495672_0003665 3300047320 Bacteria 12990
73 Ga0495686_0012486 3300047472 Bacteria 5940
74 Ga0496105_0000078 3300048908 Bacteria 74087
75 Ga0496116_0067401 3300048919 Bacteria 2286
76 Ga0496117_0003490 3300048920 Bacteria 18235
77 Ga0496118_0003285 3300048921 Bacteria 20575
78 Ga0496119_0003020 3300048922 Bacteria 17816
79 Ga0496122_0012697 3300048925 Bacteria 8344
80 Ga0496124_0003905 3300048927 Bacteria 17817
81 Ga0501031_0000005 3300049568 Bacteria 183960
82 Ga0501032_0000049 3300049569 Bacteria 105967
83 Ga0501033_0000129 3300049570 Bacteria 73102
84 Ga0501034_0000560 3300049571 Bacteria 58880
85 Ga0501036_0000014 3300049572 Bacteria 148705
86 Ga0501037_0000042 3300049573 Bacteria 118407
87 Ga0501038_0000024 3300049574 Bacteria 148705
88 Ga0501038_0017032 3300049574 Bacteria 6575
89 Ga0501039_0000052 3300049575 Bacteria 95038
90 Ga0501043_0012375 3300049579 Bacteria 6673
91 Ga0501035_0000045 3300049822 Bacteria 148705
92 Ga0501035_0012016 3300049822 Bacteria 8010
93 Ga0501044_0000044 3300049823 Bacteria 148705
94 Ga0500614_001001 3300053123 Bacteria 7009

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009098 Ga0105245_10049966 Ga0105245_100499663 544
2 3300025927 Ga0207687_10035335 Ga0207687_100353352 544
3 3300047472 Ga0495686_0012486 Ga0495686_0012486_74_1840 544
4 3300031251 Ga0265327_10001195 Ga0265327_100011957 566
5 3300049574 Ga0501038_0017032 Ga0501038_0017032_4175_6163 571
6 3300046530 Ga0495654_0000187 Ga0495654_0000187_47811_49760 574
7 3300013296 Ga0157374_10008292 Ga0157374_100082926 576
8 3300013297 Ga0157378_10000170 Ga0157378_1000017032 576
9 3300028800 Ga0265338_10012297 Ga0265338_100122974 576
10 iso_pu_bacteria 641736154 642414789 576
11 3300005614 Ga0068856_100000614 Ga0068856_1000006148 577
12 3300025226 Ga0209674_100182 Ga0209674_10018218 577
13 3300026078 Ga0207702_10002634 Ga0207702_1000263417 577
14 iso_pu_bacteria 2565956521 2566037017 577
15 iso_pu_bacteria 2515154129 2515719935 578
16 iso_pu_bacteria 2515154202 2516082486 578
17 3300006048 Ga0075363_100000261 Ga0075363_1000002616 579
18 3300031711 Ga0265314_10002636 Ga0265314_100026365 579
19 3300037312 Ga0395899_0001223 Ga0395899_0001223_13601_15562 579
20 3300037418 Ga0395900_0002213 Ga0395900_0002213_13813_15774 579
21 3300037466 Ga0395898_0001882 Ga0395898_0001882_11979_13874 579
22 3300037466 Ga0395898_0058306 Ga0395898_0058306_414_2375 579
23 3300037471 Ga0395905_0034088 Ga0395905_0034088_603_2564 579
24 3300038443 Ga0395901_0001601 Ga0395901_0001601_13623_15584 579
25 3300048908 Ga0496105_0000078 Ga0496105_0000078_14275_16287 581
26 3300009545 Ga0105237_10099463 Ga0105237_100994632 582
27 3300046471 Ga0495650_0000486 Ga0495650_0000486_46638_48665 583
28 3300046491 Ga0495584_0000222 Ga0495584_0000222_16400_18427 583
29 3300046519 Ga0495632_0001709 Ga0495632_0001709_8973_11000 583
30 3300046542 Ga0495597_0000151 Ga0495597_0000151_9000_11027 583
31 3300046616 Ga0495668_0005883 Ga0495668_0005883_5796_7823 583
32 3300046665 Ga0495661_0000044 Ga0495661_0000044_57961_59988 583
33 3300046665 Ga0495661_0031188 Ga0495661_0031188_628_2655 583
34 3300046810 Ga0495660_0001284 Ga0495660_0001284_11919_13946 583
35 3300047320 Ga0495672_0003665 Ga0495672_0003665_9843_11870 583
36 3300048920 Ga0496117_0003490 Ga0496117_0003490_6441_8483 583
37 3300048921 Ga0496118_0003285 Ga0496118_0003285_9753_11795 583
38 3300048922 Ga0496119_0003020 Ga0496119_0003020_6021_8063 583
39 3300048925 Ga0496122_0012697 Ga0496122_0012697_5379_7421 583
40 3300048927 Ga0496124_0003905 Ga0496124_0003905_6022_8064 583
41 3300049822 Ga0501035_0012016 Ga0501035_0012016_1960_3975 583
42 iso_pu_bacteria 2510917026 2511170646 583
43 3300005329 Ga0070683_100000455 Ga0070683_10000045513 584
44 3300005535 Ga0070684_100000080 Ga0070684_1000000803 584
45 3300025944 Ga0207661_10000005 Ga0207661_100000053 584
46 3300031251 Ga0265327_10004493 Ga0265327_100044932 585
47 iso_pu_bacteria 2786546548 2787505852 585
48 iso_pu_bacteria 2952252522 2952254506 585
49 iso_pu_bacteria 8019668869 8019675988 585
50 3300005617 Ga0068859_100055434 Ga0068859_1000554342 586
51 3300006931 Ga0097620_100055433 Ga0097620_1000554332 586
52 3300025910 Ga0207684_10000114 Ga0207684_1000011461 586
53 3300044712 Ga0453684_0000406 Ga0453684_0000406_102019_103959 586
54 3300048919 Ga0496116_0067401 Ga0496116_0067401_84_1949 587
55 3300017792 Ga0163161_10015380 Ga0163161_100153802 588
56 3300025291 Ga0209675_1001573 Ga0209675_10015733 588
57 3300005548 Ga0070665_100001127 Ga0070665_10000112710 589
58 3300005843 Ga0068860_100000614 Ga0068860_10000061412 589
59 3300028381 Ga0268264_10000307 Ga0268264_1000030725 589
60 3300053123 Ga0500614_001001 Ga0500614_001001_1580_3481 589
61 3300015265 Ga0182005_1000804 Ga0182005_10008047 590
62 3300044658 Ga0466972_0000130 Ga0466972_0000130_7634_9520 590
63 3300046524 Ga0495648_0002402 Ga0495648_0002402_12229_14100 590
64 3300046691 Ga0495670_0000750 Ga0495670_0000750_6621_8492 590
65 3300047320 Ga0495672_0000969 Ga0495672_0000969_15314_17185 590
66 3300025292 Ga0209676_1011768 Ga0209676_10117682 591
67 3300005406 Ga0070703_10000210 Ga0070703_100002105 593
68 3300005445 Ga0070708_100015926 Ga0070708_1000159264 593
69 3300005467 Ga0070706_100000145 Ga0070706_10000014559 593
70 3300005844 Ga0068862_100000014 Ga0068862_10000001415 593
71 3300009093 Ga0105240_10002398 Ga0105240_100023987 593
72 3300025885 Ga0207653_10000056 Ga0207653_1000005660 593
73 3300025913 Ga0207695_10004007 Ga0207695_100040076 593
74 3300028380 Ga0268265_10000176 Ga0268265_1000017616 593
75 3300031507 Ga0307509_10032109 Ga0307509_100321094 593
76 3300046794 Ga0495589_0023130 Ga0495589_0023130_723_2606 593
77 3300005340 Ga0070689_100001059 Ga0070689_1000010595 594
78 3300025936 Ga0207670_10000729 Ga0207670_100007296 594
79 3300031238 Ga0265332_10000005 Ga0265332_10000005233 594
80 3300049568 Ga0501031_0000005 Ga0501031_0000005_91064_92935 594
81 3300049569 Ga0501032_0000049 Ga0501032_0000049_56523_58394 594
82 3300049570 Ga0501033_0000129 Ga0501033_0000129_13319_15190 594
83 3300049571 Ga0501034_0000560 Ga0501034_0000560_43442_45313 594
84 3300049572 Ga0501036_0000014 Ga0501036_0000014_90312_92183 594
85 3300049573 Ga0501037_0000042 Ga0501037_0000042_60014_61885 594
86 3300049574 Ga0501038_0000024 Ga0501038_0000024_90312_92183 594
87 3300049575 Ga0501039_0000052 Ga0501039_0000052_36645_38516 594
88 3300049579 Ga0501043_0012375 Ga0501043_0012375_3049_4920 594
89 3300049822 Ga0501035_0000045 Ga0501035_0000045_56523_58394 594
90 3300049823 Ga0501044_0000044 Ga0501044_0000044_90312_92183 594
91 iso_pu_bacteria 2599185236 2599718832 594
92 iso_pu_bacteria 2721755763 2723879045 594
93 3300041407 Ga0439447_001536 Ga0439447_001536_6255_8144 595
94 3300042006 Ga0439432_000018 Ga0439432_000018_17691_19580 595
95 3300046526 Ga0495666_0000498 Ga0495666_0000498_8990_10879 595
96 3300046531 Ga0495665_0003818 Ga0495665_0003818_1167_3056 595
97 3300046557 Ga0495622_0001512 Ga0495622_0001512_1055_2944 595
98 3300046690 Ga0495624_0007839 Ga0495624_0007839_2314_4203 595
99 3300047315 Ga0495581_0001821 Ga0495581_0001821_2403_4292 595
100 3300017792 Ga0163161_10003664 Ga0163161_100036644 597
101 3300037466 Ga0395898_0000013 Ga0395898_0000013_229167_231326 599
102 iso_pu_bacteria 2643221593 2643974747 607
103 3300003187 JGI25151J46595_10000324 JGI25151J46595_1000032438 611
104 3300025245 Ga0207425_1000872 Ga0207425_10008728 611
105 3300025294 Ga0209025_1000021 Ga0209025_1000021155 611

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01555

N6_N4_Mtase

DNA methylase

145

509

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hek-assembly3.cif.gz_D crystal structure of m1.hpyavi 0.7896 102 457
5hek-assembly3.cif.gz_D crystal structure of m1.hpyavi 0.7732 102 457
5w7m-assembly1.cif.gz_A crystal structure of roqn 0.7614 120 182
6k0w-assembly2.cif.gz_C dna methyltransferase in complex with sinefungin 0.7504 64 611
6k0w-assembly2.cif.gz_C dna methyltransferase in complex with sinefungin 0.7471 64 611
ID Description Score Start End Superfamily
5hekD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7896 102 457 3.40.50.150
5hekD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7732 102 457 3.40.50.150
af_Q2G0N7_5_202_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7646 105 236 3.40.50.150
af_Q5AEH4_119_363_3.80.10.10 Alpha Beta;Alpha-Beta Horseshoe;Leucine-rich repeat, LRR (right-handed beta-alpha superhelix);Ribonuclease Inhibitor 0.7469 561 611 3.80.10.10
af_I1JZX5_64_282_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7334 110 236 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A0D0SLM5-F1-model_v4 Type III restriction-modification system methylation subunit (EC 2.1.1.72) 0.9435 370 611 GO:0003677
GO:0008170
GO:0009007
GO:0032259
AF-A0A0D0SLM5-F1-model_v4 Type III restriction-modification system methylation subunit (EC 2.1.1.72) 0.9359 370 611 GO:0003677
GO:0008170
GO:0009007
GO:0032259
AF-E6LPQ4-F1-model_v4 DNA methylase N-4/N-6 domain-containing protein 0.9357 358 611 GO:0003677
GO:0008170
GO:0032259
AF-E6LPQ4-F1-model_v4 DNA methylase N-4/N-6 domain-containing protein 0.9321 358 611 GO:0003677
GO:0008170
GO:0032259
AF-A0A645CSY8-F1-model_v4 Uncharacterized protein 0.9243 392 611

Feature Viewer

pLDDT pTM Quality
80.06 0.72 High
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Predicted Structure (AlphaFold2)

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