F026600

General Info

Members Datasets Scaffolds Average Seq Length
104 84 78 407

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10147679|Ga0157380_101476792
Length 452
Sequence MRHSRNASRYSIDGNPQSGLIIYLYQPNHIEHSKSIVMYKSLPAILNTFFLLLIVAQIQACGGTESPNGVVESAKADTGVAPVETKKRESDLKPAFAGQTRIAGVHTKTAYEGKLLTKKLESPWGIASLPDGRFLITQKNGSMVIASNTGTVGEPIKGLPDVNSSGQGGLLGLTLDPAFSQNRMVYWVFSENVSGGSLTSVAKGKLSADEKNIENAVVIYRATPAYKNGMHYGGRILFDRSGNIWISTGERSDTKTRPQAQQLNSGYGKVIRITKEGKAVEGNPFSGGERPEIYSYGHRNVQSLAMHPVTGDIWEGEFGPRGGDEINLIRPGKNYGWPTITYGIEYGGDKVGEGISQKEGLEQPIYYWDPVISPSGMTFYSGDAIPEWKNNLFISCLSGEHIARLVITNNQVVGEERLLVKENQRFRDITQGNDGALYAVTDSGRLYRIGKK

Samples

Sample ID Description Type Environment
1 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
2 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
3 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
4 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
5 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
6 2738541278 Niastella sp. CF465 Isolate Unclassified
7 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
8 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
9 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
10 2739367663 Pedobacter sp. YR510 Isolate Unclassified
11 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
12 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
13 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
14 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
15 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
16 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
17 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
18 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
19 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
20 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
21 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
22 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
23 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
24 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
25 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
26 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
31 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
32 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
46 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
47 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
48 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
49 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
53 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
54 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
55 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
56 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
57 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
58 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
61 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
62 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
63 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
64 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
65 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
67 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
68 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
69 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
70 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
71 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
72 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
73 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
74 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
75 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
76 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
77 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
78 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
79 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
80 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
81 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
82 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
83 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
84 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.04
Metatranscriptomes 0.96
Isolates 25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.65
Nodule 3.85
Rhizoplane 0
Rhizosphere 58.65
Stem 0
Stem Tuber 0
Unclassified 28.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10002519 3300003323 Bacteria 15703
2 rootH1_10026142 3300003323 Bacteria 62137
3 rootH1_10083904 3300003323 Bacteria 44036
4 Ga0006562J51391_1008267 3300003578 Bacteria 2272
5 Ga0065714_10003094 3300005288 Bacteria 13417
6 Ga0065714_10096959 3300005288 Bacteria 1747
7 Ga0065712_10026511 3300005290 Bacteria 1835
8 Ga0065715_10147309 3300005293 Bacteria 1773
9 Ga0070675_100094417 3300005354 Bacteria 2510
10 Ga0070684_100049188 3300005535 Bacteria 3658
11 Ga0068851_10022765 3300005834 Unclassified 3057
12 Ga0079104_1000052 3300006946 Bacteria 170223
13 Ga0099826_10025544 3300006948 Bacteria 4375
14 Ga0105244_10000201 3300009036 Bacteria 60835
15 Ga0157373_10057485 3300013100 Bacteria 2759
16 Ga0157371_10002337 3300013102 Bacteria 18167
17 Ga0157371_10105303 3300013102 Unclassified 2001
18 Ga0157370_10000029 3300013104 Bacteria 145930
19 Ga0157370_10000687 3300013104 Bacteria 42182
20 Ga0157370_10019742 3300013104 Bacteria 6746
21 Ga0157370_10055387 3300013104 Bacteria 3778
22 Ga0157369_10005730 3300013105 Bacteria 14434
23 Ga0157374_10110603 3300013296 Bacteria 2642
24 Ga0157372_10032633 3300013307 Bacteria 5711
25 Ga0157372_10246313 3300013307 Bacteria 2074
26 Ga0157375_10063267 3300013308 Bacteria 3680
27 Ga0157380_10002783 3300014326 Bacteria 11884
28 Ga0157380_10147679 3300014326 Bacteria 2028
29 Ga0182006_1028530 3300015261 Bacteria 2269
30 Ga0163161_10001157 3300017792 Bacteria 19859
31 Ga0207655_1000381 3300025728 Bacteria 61849
32 Ga0207659_10031365 3300025926 Bacteria 3638
33 Ga0209281_1000210 3300027111 Bacteria 132199
34 Ga0209489_116297 3300027361 Bacteria 4041
35 Ga0307515_10009312 3300028794 Bacteria 19000
36 Ga0307513_10078559 3300031456 Bacteria 3413
37 Ga0307513_10082443 3300031456 Bacteria 3311
38 Ga0307413_10001087 3300031824 Bacteria 9944
39 Ga0307416_100011821 3300032002 Bacteria 5849
40 Ga0307414_10000024 3300032004 Bacteria 205727
41 Ga0307414_10003575 3300032004 Bacteria 8318
42 Ga0307414_10019066 3300032004 Bacteria 4243
43 Ga0307414_10037864 3300032004 Bacteria 3233
44 Ga0307414_10057694 3300032004 Bacteria 2730
45 Ga0307411_10000001 3300032005 Bacteria 931810
46 Ga0307510_10084281 3300033180 Bacteria 3062
47 Ga0439436_0011161 3300041404 Bacteria 2731
48 Ga0439436_0013795 3300041404 Unclassified 2444
49 Ga0439439_0017090 3300041406 Bacteria 1781
50 Ga0451853_0556579 3300041512 Unclassified 4905
51 Ga0439431_0000247 3300041997 Bacteria 10960
52 Ga0439449_0040596 3300042007 Bacteria 1730
53 Ga0439449_0047663 3300042007 Bacteria 1587
54 Ga0453684_0049285 3300044712 Bacteria 5557
55 Ga0496117_0108339 3300048920 Bacteria 1738
56 Ga0496118_0081797 3300048921 Bacteria 2266
57 Ga0496121_0026629 3300048924 Bacteria 5439
58 Ga0496124_0009949 3300048927 Bacteria 9715
59 Ga0496126_0012416 3300048929 Bacteria 8730
60 Ga0501043_0010561 3300049579 Bacteria 7227
61 Ga0501067_0017155 3300049583 Bacteria 4002
62 Ga0501249_000021 3300049679 Bacteria 94598
63 Ga0501259_004311 3300049688 Bacteria 2264
64 Ga0501219_000786 3300049703 Bacteria 4214
65 Ga0501245_005040 3300049708 Bacteria 1825
66 Ga0501266_000023 3300049763 Bacteria 82396
67 Ga0501044_0020528 3300049823 Bacteria 7054
68 Ga0501284_00047 3300050005 Bacteria 47681
69 Ga0500583_0000271 3300053092 Bacteria 18228
70 Ga0500641_0000002 3300053096 Bacteria 291538
71 Ga0500641_0001282 3300053096 Bacteria 8926
72 Ga0500594_0014436 3300053118 Bacteria 1891
73 Ga0500658_0000003 3300053134 Bacteria 512506
74 Ga0500604_0023440 3300053151 Bacteria 1760
75 Ga0500604_0026907 3300053151 Bacteria 1661
76 Ga0500622_0000003 3300053156 Bacteria 613483
77 Ga0500622_0000008 3300053156 Bacteria 423636
78 Ga0501084_0118016 3300054114 Unclassified 2230

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300032004 Ga0307414_10019066 Ga0307414_100190663 368
2 3300013100 Ga0157373_10057485 Ga0157373_100574853 370
3 3300013307 Ga0157372_10246313 Ga0157372_102463132 372
4 3300049708 Ga0501245_005040 Ga0501245_005040_276_1430 376
5 3300032004 Ga0307414_10057694 Ga0307414_100576942 384
6 3300053096 Ga0500641_0001282 Ga0500641_0001282_1905_3131 386
7 3300053118 Ga0500594_0014436 Ga0500594_0014436_426_1652 386
8 3300009036 Ga0105244_10000201 Ga0105244_1000020129 389
9 3300013308 Ga0157375_10063267 Ga0157375_100632671 389
10 3300042007 Ga0439449_0047663 Ga0439449_0047663_83_1318 394
11 3300005834 Ga0068851_10022765 Ga0068851_100227651 396
12 3300053156 Ga0500622_0000003 Ga0500622_0000003_425770_427011 396
13 3300005535 Ga0070684_100049188 Ga0070684_1000491882 397
14 3300013296 Ga0157374_10110603 Ga0157374_101106032 397
15 3300013102 Ga0157371_10105303 Ga0157371_101053032 398
16 3300053151 Ga0500604_0026907 Ga0500604_0026907_389_1630 398
17 iso_pu_bacteria 2643221716 2644642396 398
18 iso_pu_bacteria 2738541278 2738729180 398
19 iso_pu_bacteria 8036736890 8036738599 398
20 3300003323 rootH1_10026142 rootH1_1002614237 399
21 iso_pu_bacteria 2513020052 2513235149 399
22 iso_pu_bacteria 2519899754 2520881498 399
23 iso_pu_bacteria 2643221667 2644373180 399
24 iso_pu_bacteria 2643221725 2644682950 399
25 iso_pu_bacteria 2738541279 2738736536 399
26 iso_pu_bacteria 2738541285 2738766825 399
27 iso_pu_bacteria 2738543007 2739218118 399
28 iso_pu_bacteria 2802428842 2802654434 399
29 iso_pu_bacteria 2816332280 2817416766 399
30 iso_pu_bacteria 2881359912 2881363835 399
31 iso_pu_bacteria 2919683626 2919687302 399
32 iso_pu_bacteria 2958458903 2958462234 399
33 iso_pu_bacteria 8055419101 8055422249 399
34 iso_pu_bacteria 8055592153 8055596225 399
35 iso_pu_bacteria 8056440228 8056443965 399
36 3300041404 Ga0439436_0011161 Ga0439436_0011161_1312_2544 400
37 3300041406 Ga0439439_0017090 Ga0439439_0017090_172_1404 400
38 3300042007 Ga0439449_0040596 Ga0439449_0040596_190_1422 400
39 3300044712 Ga0453684_0049285 Ga0453684_0049285_952_2172 400
40 3300049583 Ga0501067_0017155 Ga0501067_0017155_1921_3189 400
41 3300049703 Ga0501219_000786 Ga0501219_000786_1396_2658 400
42 3300049823 Ga0501044_0020528 Ga0501044_0020528_5207_6430 400
43 3300050005 Ga0501284_00047 Ga0501284_00047_178_1440 400
44 3300053151 Ga0500604_0023440 Ga0500604_0023440_131_1345 400
45 3300054114 Ga0501084_0118016 Ga0501084_0118016_89_1312 400
46 iso_pu_bacteria 2739367663 2739647772 400
47 iso_pu_bacteria 2739367857 2740001911 400
48 iso_pu_bacteria 2739367858 2740006727 400
49 iso_pu_bacteria 2857618242 2857618878 400
50 iso_pu_bacteria 2929150217 2929153922 400
51 3300014326 Ga0157380_10147679 Ga0157380_101476792 401
52 3300041997 Ga0439431_0000247 Ga0439431_0000247_8501_9748 401
53 3300003323 rootH1_10083904 rootH1_1008390410 402
54 3300003578 Ga0006562J51391_1008267 Ga0006562J51391_10082672 402
55 3300005290 Ga0065712_10026511 Ga0065712_100265111 402
56 3300005354 Ga0070675_100094417 Ga0070675_1000944172 402
57 3300006946 Ga0079104_1000052 Ga0079104_100005257 402
58 3300013102 Ga0157371_10002337 Ga0157371_100023372 402
59 3300013104 Ga0157370_10000687 Ga0157370_100006871 402
60 3300013104 Ga0157370_10055387 Ga0157370_100553872 402
61 3300013105 Ga0157369_10005730 Ga0157369_100057309 402
62 3300013307 Ga0157372_10032633 Ga0157372_100326332 402
63 3300014326 Ga0157380_10002783 Ga0157380_100027832 402
64 3300015261 Ga0182006_1028530 Ga0182006_10285302 402
65 3300025926 Ga0207659_10031365 Ga0207659_100313652 402
66 3300027111 Ga0209281_1000210 Ga0209281_100021065 402
67 3300028794 Ga0307515_10009312 Ga0307515_1000931216 402
68 3300031456 Ga0307513_10078559 Ga0307513_100785592 402
69 3300031456 Ga0307513_10082443 Ga0307513_100824432 402
70 3300032002 Ga0307416_100011821 Ga0307416_1000118214 402
71 3300032004 Ga0307414_10037864 Ga0307414_100378642 402
72 3300041404 Ga0439436_0013795 Ga0439436_0013795_454_1704 402
73 3300048920 Ga0496117_0108339 Ga0496117_0108339_147_1373 402
74 3300048921 Ga0496118_0081797 Ga0496118_0081797_981_2207 402
75 3300048927 Ga0496124_0009949 Ga0496124_0009949_4951_6177 402
76 3300048929 Ga0496126_0012416 Ga0496126_0012416_98_1324 402
77 3300049579 Ga0501043_0010561 Ga0501043_0010561_1436_2680 402
78 3300049688 Ga0501259_004311 Ga0501259_004311_359_1591 402
79 3300053092 Ga0500583_0000271 Ga0500583_0000271_4544_5791 402
80 3300053156 Ga0500622_0000008 Ga0500622_0000008_236088_237329 402
81 3300005288 Ga0065714_10096959 Ga0065714_100969592 403
82 3300006948 Ga0099826_10025544 Ga0099826_100255443 403
83 3300013104 Ga0157370_10000029 Ga0157370_1000002931 403
84 3300017792 Ga0163161_10001157 Ga0163161_100011572 403
85 3300025728 Ga0207655_1000381 Ga0207655_100038129 403
86 3300027361 Ga0209489_116297 Ga0209489_1162972 403
87 3300032004 Ga0307414_10003575 Ga0307414_100035757 403
88 3300033180 Ga0307510_10084281 Ga0307510_100842812 403
89 3300048924 Ga0496121_0026629 Ga0496121_0026629_246_1472 403
90 3300049679 Ga0501249_000021 Ga0501249_000021_27387_28616 403
91 iso_pu_bacteria 2883068021 2883068148 403
92 iso_pu_bacteria 2896109856 2896111025 403
93 3300003323 rootH1_10002519 rootH1_100025197 404
94 3300005288 Ga0065714_10003094 Ga0065714_100030941 404
95 3300005293 Ga0065715_10147309 Ga0065715_101473091 404
96 3300013104 Ga0157370_10019742 Ga0157370_100197426 404
97 3300031824 Ga0307413_10001087 Ga0307413_100010874 404
98 3300032004 Ga0307414_10000024 Ga0307414_10000024118 404
99 3300032005 Ga0307411_10000001 Ga0307411_1000000134 404
100 3300041512 Ga0451853_0556579 Ga0451853_0556579_436_1668 404
101 3300049763 Ga0501266_000023 Ga0501266_000023_8110_9342 404
102 3300053096 Ga0500641_0000002 Ga0500641_0000002_261402_262634 404
103 3300053134 Ga0500658_0000003 Ga0500658_0000003_414714_415946 404
104 iso_pu_bacteria 2738541278 2738727956 404

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07995

GSDH

Glucose / Sorbosone dehydrogenase

120

448

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cdy-assembly1.cif.gz_A crystal structure of glucose dehydrogenase 0.93 62 404
7cdy-assembly2.cif.gz_B crystal structure of glucose dehydrogenase 0.9297 62 400
7cgz-assembly1.cif.gz_A glucose dehydrogenase 0.9273 62 402
7cgz-assembly1.cif.gz_B glucose dehydrogenase 0.9226 62 402
7cdy-assembly1.cif.gz_A crystal structure of glucose dehydrogenase 0.9197 62 404
ID Description Score Start End Superfamily
af_P75804_19_370_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9116 56 404 2.120.10.30
af_P75804_19_370_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9017 56 404 2.120.10.30
2ismB00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.845 60 401 2.120.10.30
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8443 61 404 2.120.10.30
1qbiA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8429 57 401 2.120.10.30
ID Description Score Start End GO Terms
AF-A0A562KYQ3-F1-model_v4 deleted 0.9997 330 404
AF-A0A562KYQ3-F1-model_v4 deleted 0.9738 330 404
AF-A0A4Q5R0J7-F1-model_v4 PQQ-dependent sugar dehydrogenase 0.9675 57 404
AF-A0A4Q5R0J7-F1-model_v4 PQQ-dependent sugar dehydrogenase 0.9647 57 404
AF-A0A3N7GJX8-F1-model_v4 PQQ-dependent sugar dehydrogenase 0.9639 40 404

Feature Viewer

pLDDT pTM Quality
84.99 0.86 High
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Predicted Structure (AlphaFold2)

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