F025834

General Info

Members Datasets Scaffolds Average Seq Length
104 83 206 232

Family's Representative Sequence

Representative Sequence 3300006178|Ga0075367_10401651|Ga0075367_104016511
Length 252
Sequence MTSETVILAIEDEPQLVRFLRAALSSHGMKVLATGTGQLGLVEASTRVPDLILLDLGLPDMEGVEVCRRLREWTRIPIIVLSARGQEHDKIEALDAGADDYLTKPFGIGELLARIRVALRHSRRTEGTGESRIKAGSLVIDIADHRVTRDGAEVHLTPNEFKLLAELAKNTDRVVTQRQLLKAVWGPGSVDHTHYLRVYMAALRHKLEDVPARPQHLVTEMGIGYRFRAAPSDTTLPEEPGSGPPSAAPRSR

Samples

Sample ID Description Type Environment
1 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
2 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
3 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
4 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
5 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
8 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
9 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
12 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
13 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
17 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
40 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
41 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
44 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
45 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
46 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
47 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
50 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
51 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
54 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
55 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
59 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
60 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
61 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
64 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
65 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
66 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
67 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
68 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
69 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
70 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
71 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
72 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
73 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
74 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
75 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
76 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
77 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
78 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
79 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
80 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
81 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
82 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
83 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.42
Nodule 0
Rhizoplane 0.96
Rhizosphere 75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075367_10401651 3300006178 Bacteria 867
2 Ga0070701_10040194 3300005438 Bacteria 2376
3 Ga0070678_100195926 3300005456 Bacteria 1664
4 Ga0070706_100221483 3300005467 Bacteria 1766
5 Ga0070698_100000145 3300005471 Bacteria 64197
6 Ga0070698_100096571 3300005471 Bacteria 2932
7 Ga0070698_100953789 3300005471 Bacteria 804
8 Ga0070679_100276514 3300005530 Bacteria 1632
9 Ga0070704_100027025 3300005549 Bacteria 3800
10 Ga0068859_100396790 3300005617 Bacteria 1475
11 Ga0068866_10100102 3300005718 Bacteria 1597
12 Ga0075364_10046553 3300006051 Bacteria 2824
13 Ga0075366_10134676 3300006195 Bacteria 1492
14 Ga0097621_100867236 3300006237 Bacteria 839
15 Ga0075370_10176393 3300006353 Bacteria 1257
16 Ga0075428_100213672 3300006844 Bacteria 2084
17 Ga0075428_100259610 3300006844 Bacteria 1871
18 Ga0075431_100099788 3300006847 Bacteria 2996
19 Ga0075433_10017841 3300006852 Bacteria 5889
20 Ga0075434_100044392 3300006871 Bacteria 4409
21 Ga0075434_100488278 3300006871 Bacteria 1252
22 Ga0075429_100010992 3300006880 Bacteria 7833
23 Ga0075429_100376448 3300006880 Bacteria 1243
24 Ga0097620_100396778 3300006931 Bacteria 1475
25 Ga0111539_10202060 3300009094 Bacteria 2317
26 Ga0111539_10522831 3300009094 Bacteria 1382
27 Ga0105245_10000082 3300009098 Bacteria 95636
28 Ga0114129_10026159 3300009147 Bacteria 8263
29 Ga0114129_10397733 3300009147 Bacteria 1816
30 Ga0114129_10750391 3300009147 Bacteria 1249
31 Ga0105242_10721485 3300009176 Bacteria 978
32 Ga0105237_11061414 3300009545 Bacteria 817
33 Ga0105249_10452833 3300009553 Bacteria 1322
34 Ga0105249_10710197 3300009553 Bacteria 1066
35 Ga0157374_10383211 3300013296 Bacteria 1401
36 Ga0157378_10311810 3300013297 Bacteria 1526
37 Ga0157372_10025897 3300013307 Bacteria 6379
38 Ga0157380_10135500 3300014326 Bacteria 2107
39 Ga0157376_10125344 3300014969 Bacteria 2283
40 Ga0213876_10001563 3300021384 Bacteria 14078
41 Ga0213876_10173132 3300021384 Bacteria 1149
42 Ga0207705_10498366 3300025909 Bacteria 946
43 Ga0207684_10052043 3300025910 Bacteria 3475
44 Ga0207687_10001876 3300025927 Bacteria 14473
45 Ga0207686_10301073 3300025934 Bacteria 1191
46 Ga0207702_10185061 3300026078 Bacteria 1920
47 Ga0207675_100597475 3300026118 Bacteria 1106
48 Ga0207683_10004924 3300026121 Bacteria 11490
49 Ga0207683_10814959 3300026121 Bacteria 866
50 Ga0307515_10000942 3300028794 Bacteria 66591
51 Ga0265332_10015870 3300031238 Bacteria 3323
52 Ga0265328_10060254 3300031239 Bacteria 1393
53 Ga0265339_10185788 3300031249 Bacteria 1033
54 Ga0307509_10018374 3300031507 Bacteria 8017
55 Ga0265314_10002176 3300031711 Bacteria 20515
56 Ga0265342_10017108 3300031712 Bacteria 4722
57 Ga0307507_10092938 3300033179 Bacteria 2572
58 Ga0395899_0005426 3300037312 Bacteria 9896
59 Ga0395900_0024964 3300037418 Bacteria 6116
60 Ga0395905_0139408 3300037471 Bacteria 2282
61 Ga0436364_0988022 3300037853 Bacteria 3520
62 Ga0395901_0894953 3300038443 Bacteria 870
63 Ga0436365_0413248 3300039437 Bacteria 1383
64 Ga0436365_0602777 3300039437 Bacteria 5183
65 Ga0436365_0953192 3300039437 Bacteria 4639
66 Ga0436362_0730991 3300039453 Bacteria 1334
67 Ga0451577_0276997 3300042876 Bacteria 1520
68 Ga0453683_0003390 3300044673 Bacteria 11764
69 Ga0453684_0000588 3300044712 Bacteria 135201
70 Ga0453684_0215576 3300044712 Bacteria 2227
71 Ga0453684_0490213 3300044712 Bacteria 1362
72 Ga0451576_0010828 3300045051 Bacteria 10440
73 Ga0451576_0011490 3300045051 Bacteria 10053
74 Ga0495650_0027025 3300046471 Bacteria 2659
75 Ga0495659_0002623 3300046664 Bacteria 5800
76 Ga0496105_0668535 3300048908 Bacteria 800
77 Ga0501046_0041141 3300049580 Bacteria 3689
78 Ga0501047_0005296 3300049581 Bacteria 12121
79 Ga0501227_007843 3300049665 Bacteria 2290
80 Ga0501267_020978 3300049764 Bacteria 722
81 nmdc:mga00v17_12421_c1 3300050491 Bacteria 4699
82 nmdc:mga0k408_72351_c1 3300050493 Bacteria 2013
83 nmdc:mga06z11_286398_c1 3300050494 Bacteria 977
84 nmdc:mga07m45_234800_c1 3300050496 Bacteria 1067
85 nmdc:mga05p37_264271_c1 3300050507 Bacteria 2058
86 nmdc:mga05p37_395812_c1 3300050507 Bacteria 1614
87 nmdc:mga09592_10351_c1 3300050508 Bacteria 7589
88 nmdc:mga09592_81159_c1 3300050508 Bacteria 2763
89 nmdc:mga08y16_358064_c1 3300050511 Bacteria 1498
90 nmdc:mga0n895_123118_c1 3300050512 Bacteria 2615
91 nmdc:mga0n895_172883_c1 3300050512 Bacteria 2192
92 nmdc:mga0rr50_89970_c1 3300050513 Bacteria 2387
93 nmdc:mga0a205_18376_c1 3300050515 Bacteria 6572
94 nmdc:mga0a205_78271_c2 3300050515 Bacteria 1518
95 Ga0495595_0146679 3300053084 Bacteria 1160
96 Ga0500566_0009377 3300053094 Bacteria 5787
97 Ga0500640_020974 3300053095 Bacteria 2813
98 Ga0500554_000095 3300053102 Bacteria 16470
99 Ga0500572_001065 3300053111 Bacteria 8132
100 Ga0500614_029021 3300053123 Bacteria 1340
101 Ga0500619_099167 3300053154 Bacteria 988
102 Ga0500645_024093 3300053730 Bacteria 1862
103 Ga0501082_0254421 3300060353 Bacteria 1528
104 Ga0075367_10401651
105 Ga0070701_10040194
106 Ga0070678_100195926
107 Ga0070706_100221483
108 Ga0070698_100000145
109 Ga0070698_100096571
110 Ga0070698_100953789
111 Ga0070679_100276514
112 Ga0070704_100027025
113 Ga0068859_100396790
114 Ga0068866_10100102
115 Ga0075364_10046553
116 Ga0075366_10134676
117 Ga0097621_100867236
118 Ga0075370_10176393
119 Ga0075428_100213672
120 Ga0075428_100259610
121 Ga0075431_100099788
122 Ga0075433_10017841
123 Ga0075434_100044392
124 Ga0075434_100488278
125 Ga0075429_100010992
126 Ga0075429_100376448
127 Ga0097620_100396778
128 Ga0111539_10202060
129 Ga0111539_10522831
130 Ga0105245_10000082
131 Ga0114129_10026159
132 Ga0114129_10397733
133 Ga0114129_10750391
134 Ga0105242_10721485
135 Ga0105237_11061414
136 Ga0105249_10452833
137 Ga0105249_10710197
138 Ga0157374_10383211
139 Ga0157378_10311810
140 Ga0157372_10025897
141 Ga0157380_10135500
142 Ga0157376_10125344
143 Ga0213876_10001563
144 Ga0213876_10173132
145 Ga0207705_10498366
146 Ga0207684_10052043
147 Ga0207687_10001876
148 Ga0207686_10301073
149 Ga0207702_10185061
150 Ga0207675_100597475
151 Ga0207683_10004924
152 Ga0207683_10814959
153 Ga0307515_10000942
154 Ga0265332_10015870
155 Ga0265328_10060254
156 Ga0265339_10185788
157 Ga0307509_10018374
158 Ga0265314_10002176
159 Ga0265342_10017108
160 Ga0307507_10092938
161 Ga0395899_0005426
162 Ga0395900_0024964
163 Ga0395905_0139408
164 Ga0436364_0988022
165 Ga0395901_0894953
166 Ga0436365_0413248
167 Ga0436365_0602777
168 Ga0436365_0953192
169 Ga0436362_0730991
170 Ga0451577_0276997
171 Ga0453683_0003390
172 Ga0453684_0000588
173 Ga0453684_0215576
174 Ga0453684_0490213
175 Ga0451576_0010828
176 Ga0451576_0011490
177 Ga0495650_0027025
178 Ga0495659_0002623
179 Ga0496105_0668535
180 Ga0501046_0041141
181 Ga0501047_0005296
182 Ga0501227_007843
183 Ga0501267_020978
184 nmdc:mga00v17_12421_c1
185 nmdc:mga0k408_72351_c1
186 nmdc:mga06z11_286398_c1
187 nmdc:mga07m45_234800_c1
188 nmdc:mga05p37_264271_c1
189 nmdc:mga05p37_395812_c1
190 nmdc:mga09592_10351_c1
191 nmdc:mga09592_81159_c1
192 nmdc:mga08y16_358064_c1
193 nmdc:mga0n895_123118_c1
194 nmdc:mga0n895_172883_c1
195 nmdc:mga0rr50_89970_c1
196 nmdc:mga0a205_18376_c1
197 nmdc:mga0a205_78271_c2
198 Ga0495595_0146679
199 Ga0500566_0009377
200 Ga0500640_020974
201 Ga0500554_000095
202 Ga0500572_001065
203 Ga0500614_029021
204 Ga0500619_099167
205 Ga0500645_024093
206 Ga0501082_0254421

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

7

116

0.98

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

151

227

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9913 13 128
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9911 13 128
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9902 13 128
1zh4-assembly1.cif.gz_A crystal structure of the mg+2/bef3-bound receiver domain of kdp potassium transport system response regulator kdpe 0.9882 12 130
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9865 12 130
ID Description Score Start End Superfamily
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9958 12 90 3.40.50.2300
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9918 13 90 3.40.50.2300
af_P76340_1_79_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9886 13 90 3.40.50.2300
af_Q9KJN4_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9878 12 90 3.40.50.2300
af_P69228_9_89_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.985 11 90 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A376UEV8-F1-model_v4 Two-component response regulator 0.9906 12 132 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-X8EZZ5-F1-model_v4 deleted 0.9896 12 132
AF-A0A3B8YBM5-F1-model_v4 deleted 0.9887 11 128
AF-A0A2J5NI82-F1-model_v4 DNA-binding response regulator 0.9886 13 127 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7Y5QFY7-F1-model_v4 Response regulator transcription factor 0.9872 12 130 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Map