F010440
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 101 | 43 | 100 | 336 |
Family's Representative Sequence
| Representative Sequence | 3300042876|Ga0451577_0085977|Ga0451577_0085977_952_2058 |
| Length | 368 |
| Sequence | MKNISDMDNRYVIIMAGGVGSRFWPLSRREKPKQFLDILGTGETLLQQTFRRFKETCPEKNIFVVTSSDHKDLVIEQLGIDPTRVLGEPFRRNTAPCIAYGTFRILKENPKAVIAVTPADHLIVKEDKFCEVIKNCFEFAGKNDALVTIGIKPDRPETGYGYIQANKKKPVKDQENLLKVKTFTEKPNIDLAKIFQESGDFYWNSGIFIWKMKSIMDAFEKYMPDTFAAFGEGRNVFGTKQEQSFIGKTYAECRSISIDYGIMEKADNVYVMCSTDIGWSDLGTWTSLYEHSAVDRSGNAVVRGDLFTYDNKGNIFNIAPGKIAVIQGLKDYIVVDADDVLLIVKKDEEQNIKQYLDDVKKSTQEKFL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2884634485 | Algoriphagus kandeliae XY-J91 | Isolate | Unclassified |
| 2 | 2919692658 | Algoriphagus sp. 4150 | Isolate | Rhizosphere |
| 3 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 4 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 5 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 6 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 7 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 8 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 9 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 10 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 11 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 12 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 13 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 14 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 15 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 16 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 17 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 18 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 19 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 20 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 21 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 22 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 23 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 24 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 25 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 26 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 27 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 28 | 3300041505 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG | Metagenome | Unclassified |
| 29 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 30 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 31 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 32 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 33 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 34 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 35 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 36 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 37 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 38 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 39 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 40 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 41 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 42 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 43 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.02 |
| Metatranscriptomes | 0 |
| Isolates | 1.98 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 7.92 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 73.27 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 18.81 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH1_10001404 | 3300003316 | Bacteria | 17594 |
| 2 | rootH1_10001404 | 3300003323 | Bacteria | 8713 |
| 3 | rootH1_10190353 | 3300003316 | Bacteria | 1292 |
| 4 | rootH2_10166600 | 3300003320 | Bacteria | 4060 |
| 5 | rootL2_10002937 | 3300003322 | Bacteria | 8222 |
| 6 | rootL2_10010296 | 3300003322 | Bacteria | 10920 |
| 7 | rootL2_10057374 | 3300003322 | Unclassified | 4194 |
| 8 | rootH1_10003442 | 3300003323 | Bacteria | 125253 |
| 9 | rootH1_10017971 | 3300003323 | Bacteria | 2982 |
| 10 | rootH1_10046526 | 3300003323 | Bacteria | 3201 |
| 11 | rootH1_10055120 | 3300003323 | Bacteria | 2956 |
| 12 | rootH1_10064744 | 3300003323 | Bacteria | 6408 |
| 13 | Ga0065165_1001227 | 3300005262 | Bacteria | 29406 |
| 14 | Ga0075428_100004143 | 3300006844 | Bacteria | 15960 |
| 15 | Ga0111539_10000601 | 3300009094 | Bacteria | 46564 |
| 16 | Ga0111539_10036312 | 3300009094 | Bacteria | 5960 |
| 17 | Ga0157380_10050708 | 3300014326 | Bacteria | 3279 |
| 18 | Ga0307515_10000133 | 3300028794 | Bacteria | 176091 |
| 19 | Ga0307515_10104701 | 3300028794 | Bacteria | 3377 |
| 20 | Ga0307515_10238583 | 3300028794 | Unclassified | 1594 |
| 21 | Ga0265338_10003002 | 3300028800 | Bacteria | 24414 |
| 22 | Ga0265338_10031817 | 3300028800 | Bacteria | 5163 |
| 23 | Ga0265327_10001350 | 3300031251 | Bacteria | 31792 |
| 24 | Ga0307513_10043376 | 3300031456 | Bacteria | 4941 |
| 25 | Ga0307513_10104373 | 3300031456 | Unclassified | 2848 |
| 26 | Ga0307408_100182045 | 3300031548 | Bacteria | 1686 |
| 27 | Ga0316576_10002579 | 3300031727 | Bacteria | 10353 |
| 28 | Ga0316576_10012026 | 3300031727 | Bacteria | 5702 |
| 29 | Ga0316576_10023465 | 3300031727 | Bacteria | 4298 |
| 30 | Ga0316576_10086517 | 3300031727 | Bacteria | 2331 |
| 31 | Ga0316576_10201124 | 3300031727 | Bacteria | 1501 |
| 32 | Ga0316578_10008584 | 3300031728 | Bacteria | 5209 |
| 33 | Ga0316578_10127028 | 3300031728 | Bacteria | 1533 |
| 34 | Ga0316577_10009270 | 3300031733 | Bacteria | 5294 |
| 35 | Ga0307416_100000227 | 3300032002 | Bacteria | 29912 |
| 36 | Ga0307414_10000021 | 3300032004 | Bacteria | 213521 |
| 37 | Ga0307415_100001349 | 3300032126 | Bacteria | 11675 |
| 38 | Ga0316574_0018425 | 3300035398 | Bacteria | 4103 |
| 39 | Ga0316574_0151564 | 3300035398 | Unclassified | 1494 |
| 40 | Ga0316582_0014385 | 3300036647 | Unclassified | 4489 |
| 41 | Ga0316582_0062735 | 3300036647 | Unclassified | 2387 |
| 42 | Ga0316584_0000631 | 3300036712 | Bacteria | 19084 |
| 43 | Ga0316584_0001791 | 3300036712 | Bacteria | 13251 |
| 44 | Ga0316584_0153536 | 3300036712 | Unclassified | 1713 |
| 45 | Ga0395899_0000021 | 3300037312 | Bacteria | 391702 |
| 46 | Ga0395900_0201366 | 3300037418 | Unclassified | 2014 |
| 47 | Ga0400483_006213 | 3300039062 | Bacteria | 91642 |
| 48 | Ga0451849_0210897 | 3300041505 | Unclassified | 1624 |
| 49 | Ga0451577_0005238 | 3300042876 | Bacteria | 13338 |
| 50 | Ga0451577_0017917 | 3300042876 | Bacteria | 6535 |
| 51 | Ga0451577_0043226 | 3300042876 | Bacteria | 4036 |
| 52 | Ga0451577_0085977 | 3300042876 | Bacteria | 2806 |
| 53 | Ga0451577_0133408 | 3300042876 | Bacteria | 2229 |
| 54 | Ga0451577_0160819 | 3300042876 | Bacteria | 2022 |
| 55 | Ga0451577_0270686 | 3300042876 | Bacteria | 1538 |
| 56 | Ga0451577_0289538 | 3300042876 | Bacteria | 1484 |
| 57 | Ga0453683_0000092 | 3300044673 | Bacteria | 136648 |
| 58 | Ga0453683_0000962 | 3300044673 | Bacteria | 27319 |
| 59 | Ga0453683_0003510 | 3300044673 | Bacteria | 11521 |
| 60 | Ga0453683_0205412 | 3300044673 | Bacteria | 1251 |
| 61 | Ga0453684_0000141 | 3300044712 | Bacteria | 316572 |
| 62 | Ga0453684_0000337 | 3300044712 | Bacteria | 195296 |
| 63 | Ga0453684_0005324 | 3300044712 | Bacteria | 25639 |
| 64 | Ga0453684_0006349 | 3300044712 | Bacteria | 22539 |
| 65 | Ga0453684_0008808 | 3300044712 | Bacteria | 17900 |
| 66 | Ga0453684_0014189 | 3300044712 | Bacteria | 12795 |
| 67 | Ga0453684_0019649 | 3300044712 | Bacteria | 10266 |
| 68 | Ga0453684_0027593 | 3300044712 | Bacteria | 8135 |
| 69 | Ga0453684_0030787 | 3300044712 | Bacteria | 7568 |
| 70 | Ga0453684_0041107 | 3300044712 | Bacteria | 6261 |
| 71 | Ga0453684_0048165 | 3300044712 | Bacteria | 5641 |
| 72 | Ga0453684_0073065 | 3300044712 | Bacteria | 4326 |
| 73 | Ga0453684_0074889 | 3300044712 | Bacteria | 4259 |
| 74 | Ga0453684_0089161 | 3300044712 | Bacteria | 3816 |
| 75 | Ga0453684_0120010 | 3300044712 | Bacteria | 3177 |
| 76 | Ga0453684_0197519 | 3300044712 | Bacteria | 2347 |
| 77 | Ga0453684_0226267 | 3300044712 | Unclassified | 2163 |
| 78 | Ga0453684_0489801 | 3300044712 | Bacteria | 1363 |
| 79 | Ga0466971_0083672 | 3300044719 | Unclassified | 1457 |
| 80 | Ga0466959_0006101 | 3300045049 | Bacteria | 8321 |
| 81 | Ga0451576_0000371 | 3300045051 | Bacteria | 106687 |
| 82 | Ga0451576_0000683 | 3300045051 | Bacteria | 69004 |
| 83 | Ga0451576_0001394 | 3300045051 | Bacteria | 41542 |
| 84 | Ga0451576_0010999 | 3300045051 | Bacteria | 10337 |
| 85 | Ga0451576_0032310 | 3300045051 | Bacteria | 5575 |
| 86 | Ga0451576_0047633 | 3300045051 | Bacteria | 4506 |
| 87 | Ga0451576_0050579 | 3300045051 | Bacteria | 4358 |
| 88 | Ga0451576_0144543 | 3300045051 | Bacteria | 2480 |
| 89 | Ga0451576_0204143 | 3300045051 | Unclassified | 2064 |
| 90 | Ga0466958_0234100 | 3300045836 | Unclassified | 1173 |
| 91 | Ga0495638_0000040 | 3300046460 | Bacteria | 241883 |
| 92 | nmdc:mga0qj67_251669_c1 | 3300050509 | Bacteria | 1433 |
| 93 | nmdc:mga08y16_12934_c1 | 3300050511 | Bacteria | 8778 |
| 94 | Ga0500556_0003125 | 3300053104 | Bacteria | 4944 |
| 95 | Ga0500604_0000121 | 3300053151 | Bacteria | 23642 |
| 96 | Ga0500616_0000013 | 3300053153 | Bacteria | 674172 |
| 97 | Ga0500622_0000009 | 3300053156 | Bacteria | 419980 |
| 98 | Ga0500622_0000096 | 3300053156 | Bacteria | 90621 |
| 99 | Ga0500622_0001432 | 3300053156 | Bacteria | 19143 |
| 100 | Ga0500627_0084381 | 3300053158 | Bacteria | 1418 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300003323 | rootH1_10055120 | rootH1_100551203 | 248 |
| 2 | 3300036647 | Ga0316582_0062735 | Ga0316582_0062735_1457_2374 | 261 |
| 3 | 3300035398 | Ga0316574_0151564 | Ga0316574_0151564_351_1292 | 266 |
| 4 | 3300036712 | Ga0316584_0153536 | Ga0316584_0153536_242_1183 | 266 |
| 5 | 3300050509 | nmdc:mga0qj67_251669_c1 | nmdc:mga0qj67_251669_c1_15_923 | 271 |
| 6 | 3300045051 | Ga0451576_0204143 | Ga0451576_0204143_812_1807 | 295 |
| 7 | 3300044712 | Ga0453684_0226267 | Ga0453684_0226267_510_1571 | 297 |
| 8 | 3300003322 | rootL2_10057374 | rootL2_100573744 | 298 |
| 9 | 3300028794 | Ga0307515_10104701 | Ga0307515_101047013 | 298 |
| 10 | 3300044673 | Ga0453683_0205412 | Ga0453683_0205412_165_1229 | 298 |
| 11 | 3300042876 | Ga0451577_0043226 | Ga0451577_0043226_2865_3953 | 303 |
| 12 | 3300042876 | Ga0451577_0133408 | Ga0451577_0133408_719_1786 | 303 |
| 13 | 3300044712 | Ga0453684_0005324 | Ga0453684_0005324_1136_2203 | 303 |
| 14 | 3300044712 | Ga0453684_0074889 | Ga0453684_0074889_166_1254 | 303 |
| 15 | 3300037312 | Ga0395899_0000021 | Ga0395899_0000021_368259_369290 | 305 |
| 16 | 3300037418 | Ga0395900_0201366 | Ga0395900_0201366_837_1868 | 305 |
| 17 | 3300003316 | rootH1_10190353 | rootH1_101903531 | 310 |
| 18 | 3300005262 | Ga0065165_1001227 | Ga0065165_10012273 | 310 |
| 19 | 3300042876 | Ga0451577_0005238 | Ga0451577_0005238_1125_2210 | 310 |
| 20 | 3300044712 | Ga0453684_0000141 | Ga0453684_0000141_56491_57543 | 310 |
| 21 | 3300044712 | Ga0453684_0000337 | Ga0453684_0000337_59704_60789 | 310 |
| 22 | 3300044712 | Ga0453684_0048165 | Ga0453684_0048165_607_1659 | 310 |
| 23 | 3300045051 | Ga0451576_0010999 | Ga0451576_0010999_2138_3223 | 310 |
| 24 | 3300045051 | Ga0451576_0144543 | Ga0451576_0144543_455_1540 | 310 |
| 25 | 3300028800 | Ga0265338_10003002 | Ga0265338_100030022 | 311 |
| 26 | 3300044673 | Ga0453683_0003510 | Ga0453683_0003510_3779_4867 | 311 |
| 27 | 3300044712 | Ga0453684_0014189 | Ga0453684_0014189_6839_7942 | 311 |
| 28 | 3300044712 | Ga0453684_0041107 | Ga0453684_0041107_4761_5849 | 311 |
| 29 | 3300045051 | Ga0451576_0001394 | Ga0451576_0001394_37893_38981 | 311 |
| 30 | 3300003322 | rootL2_10002937 | rootL2_100029375 | 312 |
| 31 | 3300003323 | rootH1_10046526 | rootH1_100465263 | 312 |
| 32 | 3300045051 | Ga0451576_0047633 | Ga0451576_0047633_2628_3713 | 312 |
| 33 | 3300039062 | Ga0400483_006213 | Ga0400483_006213_77023_78114 | 313 |
| 34 | 3300044712 | Ga0453684_0489801 | Ga0453684_0489801_256_1341 | 314 |
| 35 | 3300031251 | Ga0265327_10001350 | Ga0265327_1000135023 | 315 |
| 36 | 3300041505 | Ga0451849_0210897 | Ga0451849_0210897_409_1485 | 315 |
| 37 | 3300044712 | Ga0453684_0073065 | Ga0453684_0073065_717_1784 | 315 |
| 38 | 3300045051 | Ga0451576_0050579 | Ga0451576_0050579_816_1964 | 315 |
| 39 | 3300028800 | Ga0265338_10031817 | Ga0265338_100318174 | 316 |
| 40 | 3300031727 | Ga0316576_10023465 | Ga0316576_100234654 | 316 |
| 41 | 3300031728 | Ga0316578_10127028 | Ga0316578_101270281 | 316 |
| 42 | 3300044719 | Ga0466971_0083672 | Ga0466971_0083672_92_1150 | 316 |
| 43 | 3300045049 | Ga0466959_0006101 | Ga0466959_0006101_2898_3956 | 316 |
| 44 | 3300045836 | Ga0466958_0234100 | Ga0466958_0234100_26_1084 | 316 |
| 45 | 3300031727 | Ga0316576_10002579 | Ga0316576_100025797 | 317 |
| 46 | 3300044712 | Ga0453684_0197519 | Ga0453684_0197519_965_2032 | 317 |
| 47 | 3300045051 | Ga0451576_0000371 | Ga0451576_0000371_46924_47988 | 317 |
| 48 | 3300045051 | Ga0451576_0032310 | Ga0451576_0032310_1365_2429 | 317 |
| 49 | 3300009094 | Ga0111539_10000601 | Ga0111539_1000060114 | 318 |
| 50 | 3300036647 | Ga0316582_0014385 | Ga0316582_0014385_438_1505 | 318 |
| 51 | 3300036712 | Ga0316584_0000631 | Ga0316584_0000631_9822_10889 | 318 |
| 52 | 3300044673 | Ga0453683_0000962 | Ga0453683_0000962_17419_18483 | 318 |
| 53 | 3300044712 | Ga0453684_0089161 | Ga0453684_0089161_1752_2816 | 318 |
| 54 | 3300044712 | Ga0453684_0120010 | Ga0453684_0120010_1104_2168 | 318 |
| 55 | 3300014326 | Ga0157380_10050708 | Ga0157380_100507083 | 319 |
| 56 | iso_pu_bacteria | 2919692658 | 2919694217 | 320 |
| 57 | iso_pu_bacteria | 2884634485 | 2884637093 | 321 |
| 58 | 3300031548 | Ga0307408_100182045 | Ga0307408_1001820452 | 323 |
| 59 | 3300032002 | Ga0307416_100000227 | Ga0307416_1000002278 | 323 |
| 60 | 3300032126 | Ga0307415_100001349 | Ga0307415_10000134912 | 323 |
| 61 | 3300003320 | rootH2_10166600 | rootH2_101666003 | 324 |
| 62 | 3300028794 | Ga0307515_10000133 | Ga0307515_1000013386 | 324 |
| 63 | 3300028794 | Ga0307515_10238583 | Ga0307515_102385832 | 324 |
| 64 | 3300044673 | Ga0453683_0000092 | Ga0453683_0000092_17889_18977 | 324 |
| 65 | 3300044712 | Ga0453684_0019649 | Ga0453684_0019649_4885_5973 | 324 |
| 66 | 3300045051 | Ga0451576_0000683 | Ga0451576_0000683_2620_3708 | 324 |
| 67 | 3300031456 | Ga0307513_10043376 | Ga0307513_100433764 | 325 |
| 68 | 3300032004 | Ga0307414_10000021 | Ga0307414_10000021142 | 325 |
| 69 | 3300036712 | Ga0316584_0001791 | Ga0316584_0001791_9976_11070 | 325 |
| 70 | 3300042876 | Ga0451577_0085977 | Ga0451577_0085977_952_2058 | 325 |
| 71 | 3300042876 | Ga0451577_0160819 | Ga0451577_0160819_836_1918 | 325 |
| 72 | 3300044712 | Ga0453684_0006349 | Ga0453684_0006349_1677_2759 | 325 |
| 73 | 3300044712 | Ga0453684_0027593 | Ga0453684_0027593_4128_5213 | 325 |
| 74 | 3300031727 | Ga0316576_10086517 | Ga0316576_100865172 | 326 |
| 75 | 3300035398 | Ga0316574_0018425 | Ga0316574_0018425_1002_2090 | 326 |
| 76 | 3300003323 | rootH1_10003442 | rootH1_100034423 | 327 |
| 77 | 3300003323 | rootH1_10017971 | rootH1_100179712 | 327 |
| 78 | 3300003323 | rootH1_10064744 | rootH1_100647443 | 327 |
| 79 | 3300006844 | Ga0075428_100004143 | Ga0075428_1000041433 | 327 |
| 80 | 3300031727 | Ga0316576_10012026 | Ga0316576_100120264 | 327 |
| 81 | 3300031727 | Ga0316576_10201124 | Ga0316576_102011242 | 327 |
| 82 | 3300031728 | Ga0316578_10008584 | Ga0316578_100085842 | 327 |
| 83 | 3300031733 | Ga0316577_10009270 | Ga0316577_100092705 | 327 |
| 84 | 3300042876 | Ga0451577_0017917 | Ga0451577_0017917_3832_4923 | 327 |
| 85 | 3300042876 | Ga0451577_0270686 | Ga0451577_0270686_199_1290 | 327 |
| 86 | 3300042876 | Ga0451577_0289538 | Ga0451577_0289538_194_1288 | 327 |
| 87 | 3300044712 | Ga0453684_0008808 | Ga0453684_0008808_14119_15210 | 327 |
| 88 | 3300044712 | Ga0453684_0030787 | Ga0453684_0030787_4455_5549 | 327 |
| 89 | 3300046460 | Ga0495638_0000040 | Ga0495638_0000040_157878_158954 | 327 |
| 90 | 3300053104 | Ga0500556_0003125 | Ga0500556_0003125_1655_2731 | 327 |
| 91 | 3300053153 | Ga0500616_0000013 | Ga0500616_0000013_155473_156549 | 327 |
| 92 | 3300003316 | rootH1_10001404 | rootH1_100014042 | 328 |
| 93 | 3300003322 | rootL2_10010296 | rootL2_100102969 | 328 |
| 94 | 3300009094 | Ga0111539_10036312 | Ga0111539_100363123 | 328 |
| 95 | 3300031456 | Ga0307513_10104373 | Ga0307513_101043732 | 328 |
| 96 | 3300050511 | nmdc:mga08y16_12934_c1 | nmdc:mga08y16_12934_c1_623_1699 | 328 |
| 97 | 3300053151 | Ga0500604_0000121 | Ga0500604_0000121_1266_2345 | 328 |
| 98 | 3300053156 | Ga0500622_0000009 | Ga0500622_0000009_346943_348022 | 328 |
| 99 | 3300053156 | Ga0500622_0000096 | Ga0500622_0000096_77519_78598 | 328 |
| 100 | 3300053156 | Ga0500622_0001432 | Ga0500622_0001432_3433_4509 | 328 |
| 101 | 3300053158 | Ga0500627_0084381 | Ga0500627_0084381_68_1147 | 328 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2cu2-assembly1.cif.gz_A-2 | crystal structure of mannose-1-phosphate geranyltransferase from thermus thermophilus hb8 | 0.8261 | 4 | 319 |
| 2cu2-assembly1.cif.gz_A-2 | crystal structure of mannose-1-phosphate geranyltransferase from thermus thermophilus hb8 | 0.7956 | 4 | 319 |
| 2qh5-assembly2.cif.gz_B | crystal structure of mannose-6-phosphate isomerase from helicobacter pylori | 0.7879 | 4 | 241 |
| 2qh5-assembly1.cif.gz_A | crystal structure of mannose-6-phosphate isomerase from helicobacter pylori | 0.7872 | 4 | 241 |
| 3okr-assembly2.cif.gz_C | structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate cytidyltransferase (ispd) | 0.7872 | 5 | 145 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P24174_4_358_3.90.550.10 | Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.8453 | 3 | 321 | 3.90.550.10 |
| 2cu2A00 | Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.8261 | 4 | 319 | 3.90.550.10 |
| af_P24174_4_358_3.90.550.10 | Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.821 | 3 | 321 | 3.90.550.10 |
| 2cu2A00 | Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.7956 | 4 | 319 | 3.90.550.10 |
| 2qh5A00 | Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.7872 | 4 | 241 | 3.90.550.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3L7UWM1-F1-model_v4 | deleted | 0.9793 | 5 | 114 |
|
| AF-A0A7C1IZM1-F1-model_v4 | Mannose-1-phosphate guanylyltransferase | 0.978 | 4 | 125 |
GO:0004475
GO:0009298 |
| AF-A0A5M5BV85-F1-model_v4 | NTP transferase domain-containing protein | 0.9777 | 4 | 153 |
GO:0004475
GO:0009298 |
| AF-A0A520C348-F1-model_v4 | Mannose-1-phosphate guanylyltransferase | 0.9769 | 1 | 105 |
GO:0004475
GO:0009298 |
| AF-A0A382PPD6-F1-model_v4 | Nucleotidyl transferase domain-containing protein | 0.9768 | 4 | 153 |
GO:0004475
GO:0009298 |
Predicted Structure (AlphaFold2)
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