F003855

General Info

Members Datasets Scaffolds Average Seq Length
100 79 100 290

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10078923|Ga0307509_100789235
Length 312
Sequence VTAPPSTGDSTGHSTAWVEIVVPVGAADVDDVAALIASEVAAASAGTEQRGDEVVFWVAAGDAGAALAEARDAVARWQAGGLAVDPARVRLAEAMPEAEWRDAWKKYFRVSRLTRQFVVVPSWERFAAGPDDVAIDLDPGMAFGTGTHASTRLVLEELQALADGPTVPARVLDVGCGSGILAIAAVKRWPGTTCVAVDHDPIAVTATCDNAAVNRVTARIAASTRGLDTLDEAFPLVLANIQAHVLRELKALLIERTAPGGTLILSGLLTPQAQPLADEFVAAGLQLVRVRPSTDDPQWSCVVLVREPRTMR

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
45 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
46 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
47 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
48 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
52 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
53 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
54 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
61 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
62 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
63 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
67 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
68 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
69 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
70 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
71 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
72 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
73 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
74 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
75 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
76 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
77 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
78 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
79 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8
Nodule 0
Rhizoplane 2
Rhizosphere 78
Stem 0
Stem Tuber 0
Unclassified 12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10259993 3300005327 Bacteria 1474
2 Ga0070683_100399408 3300005329 Bacteria 1311
3 Ga0068869_100089848 3300005334 Bacteria 2308
4 Ga0068869_100196203 3300005334 Bacteria 1590
5 Ga0070680_100109300 3300005336 Bacteria 2301
6 Ga0070689_100038836 3300005340 Bacteria 3643
7 Ga0070689_100056784 3300005340 Bacteria 3036
8 Ga0070689_100089804 3300005340 Bacteria 2420
9 Ga0070661_100461900 3300005344 Bacteria 1011
10 Ga0070674_100028908 3300005356 Bacteria 3644
11 Ga0070688_100173143 3300005365 Bacteria 1491
12 Ga0070701_10096816 3300005438 Bacteria 1627
13 Ga0070706_100110530 3300005467 Bacteria 2558
14 Ga0070698_100000609 3300005471 Bacteria 38409
15 Ga0070698_100533051 3300005471 Bacteria 1113
16 Ga0070699_100466064 3300005518 Bacteria 1146
17 Ga0070679_100006464 3300005530 Bacteria 10921
18 Ga0070665_100030429 3300005548 Bacteria 5431
19 Ga0068856_100018379 3300005614 Bacteria 6774
20 Ga0068864_100412238 3300005618 Unclassified 1286
21 Ga0068861_100050880 3300005719 Bacteria 3143
22 Ga0068863_100105428 3300005841 Bacteria 2681
23 Ga0081455_10121517 3300005937 Bacteria 2057
24 Ga0070717_10309488 3300006028 Bacteria 1405
25 Ga0075429_100012067 3300006880 Bacteria 7487
26 Ga0075429_100264557 3300006880 Bacteria 1506
27 Ga0075435_100161797 3300007076 Bacteria 1886
28 Ga0105245_10000073 3300009098 Bacteria 103799
29 Ga0105241_10155367 3300009174 Bacteria 1875
30 Ga0105242_10175524 3300009176 Bacteria 1886
31 Ga0105248_10976287 3300009177 Bacteria 957
32 Ga0105238_10184653 3300009551 Bacteria 2062
33 Ga0157374_10011359 3300013296 Bacteria 7706
34 Ga0157374_10283014 3300013296 Unclassified 1637
35 Ga0157378_10405111 3300013297 Unclassified 1345
36 Ga0157376_10058531 3300014969 Bacteria 3228
37 Ga0157376_10092673 3300014969 Bacteria 2620
38 Ga0207654_10095586 3300025911 Bacteria 1820
39 Ga0207662_10046428 3300025918 Bacteria 2569
40 Ga0207652_10012455 3300025921 Bacteria 6872
41 Ga0207687_10000388 3300025927 Bacteria 29765
42 Ga0207670_10035142 3300025936 Bacteria 3247
43 Ga0207670_10139839 3300025936 Bacteria 1784
44 Ga0207669_10017031 3300025937 Bacteria 3715
45 Ga0207689_10182580 3300025942 Bacteria 1730
46 Ga0207689_10491991 3300025942 Bacteria 1027
47 Ga0207703_10513446 3300026035 Bacteria 1126
48 Ga0207641_10121196 3300026088 Bacteria 2334
49 Ga0207676_10300308 3300026095 Unclassified 1466
50 Ga0207676_10551493 3300026095 Bacteria 1101
51 Ga0207674_10039283 3300026116 Bacteria 4907
52 Ga0207675_100074028 3300026118 Bacteria 3187
53 Ga0268266_10003179 3300028379 Bacteria 16660
54 Ga0307515_10043106 3300028794 Bacteria 7028
55 Ga0307515_10276533 3300028794 Bacteria 1392
56 Ga0265338_10258240 3300028800 Bacteria 1282
57 Ga0307513_10008333 3300031456 Bacteria 13274
58 Ga0307509_10000175 3300031507 Bacteria 100922
59 Ga0307509_10003127 3300031507 Bacteria 25689
60 Ga0307509_10038705 3300031507 Bacteria 5201
61 Ga0307509_10078923 3300031507 Bacteria 3409
62 Ga0307509_10328230 3300031507 Bacteria 1263
63 Ga0307508_10151938 3300031616 Bacteria 1919
64 Ga0307508_10200354 3300031616 Bacteria 1597
65 Ga0307516_10027450 3300031730 Bacteria 5772
66 Ga0307415_100021105 3300032126 Bacteria 3995
67 Ga0373949_0000168 3300035090 Bacteria 24909
68 Ga0373936_0000044 3300035113 Bacteria 84886
69 Ga0373941_0001283 3300035115 Bacteria 5284
70 Ga0373961_0000275 3300035241 Bacteria 23149
71 Ga0395899_0006202 3300037312 Bacteria 9260
72 Ga0395900_0113325 3300037418 Bacteria 2783
73 Ga0395898_0230878 3300037466 Bacteria 1765
74 Ga0395901_0013363 3300038443 Bacteria 8342
75 Ga0436365_0698244 3300039437 Bacteria 3276
76 Ga0451807_2240804 3300041486 Bacteria 1038
77 Ga0495686_0102053 3300047472 Bacteria 1729
78 Ga0495686_0103994 3300047472 Bacteria 1710
79 Ga0496112_0367002 3300048915 Bacteria 1381
80 Ga0501034_0033651 3300049571 Bacteria 5198
81 Ga0501034_0260753 3300049571 Bacteria 1676
82 Ga0501037_0287604 3300049573 Bacteria 1144
83 Ga0501047_0029411 3300049581 Bacteria 5298
84 Ga0501070_0018704 3300049586 Bacteria 5812
85 Ga0501070_0047897 3300049586 Bacteria 3551
86 Ga0501227_000457 3300049665 Bacteria 8682
87 Ga0501080_0477865 3300049742 Unclassified 1115
88 Ga0501081_0056713 3300049743 Bacteria 2708
89 nmdc:mga09592_106285_c1 3300050508 Bacteria 2407
90 nmdc:mga09592_7191_c1 3300050508 Bacteria 9049
91 nmdc:mga08x19_241011_c1 3300050514 Bacteria 1246
92 Ga0500578_0050214 3300053086 Bacteria 2675
93 Ga0500614_005876 3300053123 Bacteria 2576
94 Ga0500603_018539 3300053150 Bacteria 1678
95 Ga0500603_018915 3300053150 Bacteria 1666
96 Ga0500638_029553 3300053162 Bacteria 2637
97 Ga0500639_020670 3300053163 Bacteria 3477
98 Ga0500636_0156494 3300053177 Bacteria 1247
99 Ga0500661_025615 3300055283 Bacteria 1044
100 Ga0501082_0052907 3300060353 Bacteria 3500

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026095 Ga0207676_10551493 Ga0207676_105514932 216
2 3300031507 Ga0307509_10038705 Ga0307509_100387055 248
3 3300035090 Ga0373949_0000168 Ga0373949_0000168_22759_23646 260
4 3300006880 Ga0075429_100012067 Ga0075429_1000120672 261
5 3300050508 nmdc:mga09592_7191_c1 nmdc:mga09592_7191_c1_865_1731 261
6 3300005336 Ga0070680_100109300 Ga0070680_1001093004 262
7 3300053123 Ga0500614_005876 Ga0500614_005876_1486_2373 266
8 3300053150 Ga0500603_018915 Ga0500603_018915_204_1091 266
9 3300053162 Ga0500638_029553 Ga0500638_029553_194_1081 266
10 3300055283 Ga0500661_025615 Ga0500661_025615_93_980 266
11 3300005438 Ga0070701_10096816 Ga0070701_100968162 270
12 3300025918 Ga0207662_10046428 Ga0207662_100464284 270
13 3300050514 nmdc:mga08x19_241011_c1 nmdc:mga08x19_241011_c1_381_1229 271
14 3300005340 Ga0070689_100056784 Ga0070689_1000567843 273
15 3300031456 Ga0307513_10008333 Ga0307513_1000833310 274
16 3300035113 Ga0373936_0000044 Ga0373936_0000044_42798_43718 274
17 3300026035 Ga0207703_10513446 Ga0207703_105134461 277
18 3300028794 Ga0307515_10276533 Ga0307515_102765332 277
19 3300005518 Ga0070699_100466064 Ga0070699_1004660642 278
20 3300009176 Ga0105242_10175524 Ga0105242_101755242 278
21 3300009177 Ga0105248_10976287 Ga0105248_109762871 280
22 3300025942 Ga0207689_10491991 Ga0207689_104919911 280
23 3300005334 Ga0068869_100196203 Ga0068869_1001962032 281
24 3300025942 Ga0207689_10182580 Ga0207689_101825802 281
25 3300047472 Ga0495686_0103994 Ga0495686_0103994_518_1426 281
26 3300048915 Ga0496112_0367002 Ga0496112_0367002_55_918 281
27 3300009174 Ga0105241_10155367 Ga0105241_101553672 282
28 3300025911 Ga0207654_10095586 Ga0207654_100955863 282
29 3300005334 Ga0068869_100089848 Ga0068869_1000898482 283
30 3300006880 Ga0075429_100264557 Ga0075429_1002645572 283
31 3300007076 Ga0075435_100161797 Ga0075435_1001617972 283
32 3300031507 Ga0307509_10328230 Ga0307509_103282302 283
33 3300050508 nmdc:mga09592_106285_c1 nmdc:mga09592_106285_c1_622_1485 283
34 3300005937 Ga0081455_10121517 Ga0081455_101215171 285
35 3300031730 Ga0307516_10027450 Ga0307516_100274503 286
36 3300053177 Ga0500636_0156494 Ga0500636_0156494_47_985 286
37 3300005329 Ga0070683_100399408 Ga0070683_1003994081 287
38 3300005340 Ga0070689_100038836 Ga0070689_1000388365 287
39 3300005344 Ga0070661_100461900 Ga0070661_1004619002 287
40 3300005471 Ga0070698_100000609 Ga0070698_10000060925 287
41 3300005471 Ga0070698_100533051 Ga0070698_1005330511 287
42 3300005530 Ga0070679_100006464 Ga0070679_1000064648 287
43 3300005614 Ga0068856_100018379 Ga0068856_1000183796 287
44 3300005618 Ga0068864_100412238 Ga0068864_1004122382 287
45 3300009098 Ga0105245_10000073 Ga0105245_1000007374 287
46 3300009551 Ga0105238_10184653 Ga0105238_101846532 287
47 3300013296 Ga0157374_10283014 Ga0157374_102830143 287
48 3300013297 Ga0157378_10405111 Ga0157378_104051113 287
49 3300014969 Ga0157376_10058531 Ga0157376_100585313 287
50 3300025921 Ga0207652_10012455 Ga0207652_100124556 287
51 3300025927 Ga0207687_10000388 Ga0207687_100003885 287
52 3300025936 Ga0207670_10035142 Ga0207670_100351423 287
53 3300026095 Ga0207676_10300308 Ga0207676_103003082 287
54 3300026116 Ga0207674_10039283 Ga0207674_100392832 287
55 3300031507 Ga0307509_10003127 Ga0307509_100031274 287
56 3300005327 Ga0070658_10259993 Ga0070658_102599932 288
57 3300005340 Ga0070689_100089804 Ga0070689_1000898043 288
58 3300005356 Ga0070674_100028908 Ga0070674_1000289084 288
59 3300005365 Ga0070688_100173143 Ga0070688_1001731432 288
60 3300005467 Ga0070706_100110530 Ga0070706_1001105303 288
61 3300005548 Ga0070665_100030429 Ga0070665_1000304294 288
62 3300005719 Ga0068861_100050880 Ga0068861_1000508804 288
63 3300005841 Ga0068863_100105428 Ga0068863_1001054283 288
64 3300006028 Ga0070717_10309488 Ga0070717_103094882 288
65 3300013296 Ga0157374_10011359 Ga0157374_100113594 288
66 3300014969 Ga0157376_10092673 Ga0157376_100926734 288
67 3300025936 Ga0207670_10139839 Ga0207670_101398392 288
68 3300025937 Ga0207669_10017031 Ga0207669_100170312 288
69 3300026088 Ga0207641_10121196 Ga0207641_101211963 288
70 3300026118 Ga0207675_100074028 Ga0207675_1000740284 288
71 3300028379 Ga0268266_10003179 Ga0268266_100031799 288
72 3300028794 Ga0307515_10043106 Ga0307515_100431063 288
73 3300028800 Ga0265338_10258240 Ga0265338_102582401 288
74 3300031507 Ga0307509_10000175 Ga0307509_1000017566 288
75 3300031507 Ga0307509_10078923 Ga0307509_100789235 288
76 3300031616 Ga0307508_10151938 Ga0307508_101519382 288
77 3300031616 Ga0307508_10200354 Ga0307508_102003543 288
78 3300032126 Ga0307415_100021105 Ga0307415_1000211053 288
79 3300035115 Ga0373941_0001283 Ga0373941_0001283_913_1800 288
80 3300035241 Ga0373961_0000275 Ga0373961_0000275_14735_15646 288
81 3300037312 Ga0395899_0006202 Ga0395899_0006202_7525_8406 288
82 3300037418 Ga0395900_0113325 Ga0395900_0113325_87_968 288
83 3300037466 Ga0395898_0230878 Ga0395898_0230878_629_1510 288
84 3300038443 Ga0395901_0013363 Ga0395901_0013363_5370_6251 288
85 3300039437 Ga0436365_0698244 Ga0436365_0698244_584_1462 288
86 3300041486 Ga0451807_2240804 Ga0451807_2240804_31_912 288
87 3300047472 Ga0495686_0102053 Ga0495686_0102053_761_1642 288
88 3300049571 Ga0501034_0033651 Ga0501034_0033651_2168_3046 288
89 3300049571 Ga0501034_0260753 Ga0501034_0260753_154_1041 288
90 3300049573 Ga0501037_0287604 Ga0501037_0287604_185_1072 288
91 3300049581 Ga0501047_0029411 Ga0501047_0029411_767_1645 288
92 3300049586 Ga0501070_0018704 Ga0501070_0018704_2408_3295 288
93 3300049586 Ga0501070_0047897 Ga0501070_0047897_39_926 288
94 3300049665 Ga0501227_000457 Ga0501227_000457_5731_6609 288
95 3300049742 Ga0501080_0477865 Ga0501080_0477865_180_1058 288
96 3300049743 Ga0501081_0056713 Ga0501081_0056713_951_1838 288
97 3300053086 Ga0500578_0050214 Ga0500578_0050214_1313_2200 288
98 3300053150 Ga0500603_018539 Ga0500603_018539_39_926 288
99 3300053163 Ga0500639_020670 Ga0500639_020670_631_1518 288
100 3300060353 Ga0501082_0052907 Ga0501082_0052907_411_1298 288

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05175

MTS

Methyltransferase small domain

133

257

0.84

PF06325

PrmA

Ribosomal protein L11 methyltransferase (PrmA)

16

307

0.83

PF13649

Methyltransf_25

Methyltransferase domain

171

261

0.81

PF13489

Methyltransf_23

Methyltransferase domain

147

286

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.899 94 288
3grz-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8954 93 288
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8858 94 288
3grz-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8778 93 288
8hkr-assembly1.cif.gz_A crystal structure of histone h3 lysine 79 (h3k79) methyltransferase rv2067c from mycobacterium tuberculosis 0.8595 156 248
ID Description Score Start End Superfamily
af_A0A1D6EFY7_537_616_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9146 156 211 3.40.50.150
af_Q2FXZ4_114_311_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9018 93 288 3.40.50.150
3grzB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.899 94 288 3.40.50.150
3grzB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8858 94 288 3.40.50.150
3grzA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8857 132 288 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A432QUB5-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9487 156 288 GO:0005840
GO:0008276
GO:0032259
AF-A0A1Y2T339-F1-model_v4 Ribosomal protein L11 methyltransferase 0.9392 105 288 GO:0008276
GO:0032259
AF-A0A1G1H4V4-F1-model_v4 Ribosomal protein L11 methyltransferase 0.9365 86 288 GO:0005840
GO:0008276
GO:0032259
AF-A0A2N6DCY3-F1-model_v4 Methyltransferase small domain-containing protein 0.9341 129 286 GO:0008276
GO:0016020
GO:0032259
AF-A0A348VVF0-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9331 144 288 GO:0008276
GO:0032259

Feature Viewer

pLDDT pTM Quality
91.6 0.74 High
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Predicted Structure (AlphaFold2)

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