F001808

General Info

Members Datasets Scaffolds Average Seq Length
100 76 92 382

Family's Representative Sequence

Representative Sequence 3300005545|Ga0070695_100214612|Ga0070695_1002146121
Length 412
Sequence LNRIGKEGNSTLKIESDTLDFRGIILAMVERHALLKHVRSALRRGRVIALVGPRQCGKTTLARELLQGDSPNYFDLEDPISLARLDEPMTALRNLKGLVVIDEVQRRPELFPVLRVLADRKPLRAKFLILGSASPDLLRQSSESLAGRLETITMAGFSLAELGPKLQNRHWLRGGFPGSFLARSEADSWVWRTNFIRTFLERDLRQLGIVAPPMALSRFWAMLAHYHGQTWNAADPARSLGVSEPTARRYLDILSGVFMVRQLQPWHANLRKRQVKAPKIYIRDTGLLHQLLAIRSERDLLRHPKYGASWEGYVIEETIKAVEPEEAYFWGTHNGAEIDLVLVKKGRMLGVECKRKDAPRLTPSIHIALEDLKLERIAVVYPGTTRYWLADRVQAVPTEAIVDGLKGLFPGR

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2643221585 Pelomonas sp. Root662 Isolate Unclassified
3 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
4 2643221656 Pelomonas sp. Root405 Isolate Unclassified
5 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
6 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
7 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
8 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
12 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
13 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
14 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
15 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
19 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
20 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
21 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
24 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
25 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
26 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
27 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
28 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
29 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
30 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
31 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
32 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
33 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
34 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
35 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
36 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
37 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
38 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
39 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
40 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
41 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
42 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
43 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
44 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
45 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
46 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
47 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
48 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
49 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
50 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
51 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
52 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
53 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
54 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
55 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
60 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
61 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
62 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
63 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
64 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
65 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
68 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
69 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
70 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
71 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
72 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
73 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
74 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
75 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
76 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 92
Metatranscriptomes 0
Isolates 8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4
Nodule 0
Rhizoplane 0
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10111781 3300003322 Bacteria 2970
2 Ga0070695_100214612 3300005545 Bacteria 1383
3 Ga0075370_10000677 3300006353 Bacteria 13332
4 Ga0075430_100008005 3300006846 Bacteria 8933
5 Ga0075431_100011328 3300006847 Bacteria 8984
6 Ga0075429_100000522 3300006880 Bacteria 29176
7 Ga0097620_100049725 3300006931 Bacteria 4211
8 Ga0105240_10076604 3300009093 Bacteria 4123
9 Ga0114129_10000932 3300009147 Bacteria 38196
10 Ga0105242_10063124 3300009176 Bacteria 3050
11 Ga0157374_10061426 3300013296 Bacteria 3519
12 Ga0183373_1002 3300015682 Bacteria 990153
13 Ga0207695_10028671 3300025913 Bacteria 6164
14 Ga0207686_10093151 3300025934 Bacteria 1994
15 Ga0265319_1038149 3300028563 Bacteria 1634
16 Ga0265334_10003439 3300028573 Bacteria 7200
17 Ga0265318_10047761 3300028577 Bacteria 1613
18 Ga0265323_10015963 3300028653 Bacteria 2941
19 Ga0265338_10063943 3300028800 Bacteria 3204
20 Ga0265330_10004179 3300031235 Bacteria 7367
21 Ga0265330_10044361 3300031235 Bacteria 1963
22 Ga0265332_10001934 3300031238 Bacteria 10948
23 Ga0265332_10009444 3300031238 Plasmid 4354
24 Ga0265320_10040942 3300031240 Bacteria 2306
25 Ga0265325_10082009 3300031241 Bacteria 1601
26 Ga0265329_10008293 3300031242 Bacteria 3948
27 Ga0265329_10027151 3300031242 Bacteria 1883
28 Ga0265340_10008342 3300031247 Bacteria 5597
29 Ga0265339_10001518 3300031249 Bacteria 17130
30 Ga0265331_10052450 3300031250 Bacteria 1948
31 Ga0265327_10081956 3300031251 Bacteria 1591
32 Ga0265316_10001080 3300031344 Bacteria 29500
33 Ga0265316_10005101 3300031344 Bacteria 12865
34 Ga0265316_10036590 3300031344 Bacteria 3968
35 Ga0265314_10022195 3300031711 Plasmid 4864
36 Ga0265342_10000021 3300031712 Bacteria 175239
37 Ga0265342_10002942 3300031712 Bacteria 14323
38 Ga0316578_10068591 3300031728 Bacteria 2097
39 Ga0307516_10000438 3300031730 Bacteria 54750
40 Ga0307414_10000438 3300032004 Bacteria 22058
41 Ga0316574_0036142 3300035398 Unclassified 3023
42 Ga0316582_0244747 3300036647 Bacteria 1229
43 Ga0400485_10955 3300038735 Bacteria 8084
44 Ga0400485_11648 3300038735 Unclassified 2825
45 Ga0400486_08846 3300038742 Bacteria 7719
46 Ga0400486_22247 3300038742 Unclassified 2232
47 Ga0400489_78890 3300039093 Bacteria 42123
48 Ga0400487_00454 3300039110 Bacteria 2041
49 Ga0400487_07285 3300039110 Bacteria 8000
50 Ga0400487_62292 3300039110 Bacteria 5481
51 Ga0451577_0000994 3300042876 Bacteria 41267
52 Ga0451577_0006118 3300042876 Bacteria 12087
53 Ga0451577_0013525 3300042876 Bacteria 7633
54 Ga0451577_0170054 3300042876 Bacteria 1964
55 Ga0466969_0004858 3300044656 Bacteria 7158
56 Ga0466972_0036417 3300044658 Bacteria 2408
57 Ga0453683_0016823 3300044673 Bacteria 4714
58 Ga0466965_0048827 3300044683 Bacteria 2097
59 Ga0466965_0054606 3300044683 Bacteria 1987
60 Ga0453684_0000354 3300044712 Bacteria 190599
61 Ga0453684_0000373 3300044712 Bacteria 183940
62 Ga0453684_0000568 3300044712 Bacteria 138804
63 Ga0453684_0004829 3300044712 Bacteria 27681
64 Ga0453684_0006204 3300044712 Bacteria 22924
65 Ga0453684_0007037 3300044712 Bacteria 21017
66 Ga0453684_0091502 3300044712 Bacteria 3754
67 Ga0453684_0093467 3300044712 Bacteria 3704
68 Ga0453684_0109214 3300044712 Unclassified 3365
69 Ga0466971_0037023 3300044719 Bacteria 2188
70 Ga0466959_0130745 3300045049 Bacteria 1779
71 Ga0451576_0030101 3300045051 Bacteria 5805
72 Ga0451576_0067923 3300045051 Bacteria 3710
73 Ga0451576_0403828 3300045051 Bacteria 1433
74 Ga0495629_0000009 3300046459 Bacteria 348242
75 Ga0495580_0040292 3300046472 Bacteria 3338
76 Ga0495648_0032066 3300046524 Bacteria 3453
77 Ga0495609_0004286 3300046538 Bacteria 7860
78 Ga0495668_0000009 3300046616 Bacteria 492623
79 Ga0495611_0000011 3300046648 Bacteria 146643
80 Ga0495588_0064729 3300046674 Bacteria 1897
81 Ga0495636_0000161 3300047318 Bacteria 26782
82 Ga0501033_0039464 3300049570 Bacteria 3526
83 Ga0501070_0017098 3300049586 Bacteria 6087
84 Ga0501233_009207 3300049668 Bacteria 1923
85 Ga0501080_0053460 3300049742 Bacteria 3761
86 nmdc:mga07m45_3114_c1 3300050496 Bacteria 7940
87 nmdc:mga05p37_9337_c1 3300050507 Bacteria 11604
88 nmdc:mga09592_16217_c1 3300050508 Bacteria 6090
89 nmdc:mga0qj67_139716_c1 3300050509 Bacteria 1964
90 nmdc:mga06r32_26555_c1 3300050510 Bacteria 5401
91 Ga0500651_0015987 3300053093 Bacteria 4613
92 Ga0500566_0112820 3300053094 Bacteria 1476

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006846 Ga0075430_100008005 Ga0075430_1000080051 339
2 3300006847 Ga0075431_100011328 Ga0075431_1000113282 339
3 3300006880 Ga0075429_100000522 Ga0075429_10000052218 339
4 3300009147 Ga0114129_10000932 Ga0114129_1000093218 349
5 3300050507 nmdc:mga05p37_9337_c1 nmdc:mga05p37_9337_c1_313_1467 349
6 3300050508 nmdc:mga09592_16217_c1 nmdc:mga09592_16217_c1_1761_2915 349
7 3300050509 nmdc:mga0qj67_139716_c1 nmdc:mga0qj67_139716_c1_416_1570 349
8 3300050510 nmdc:mga06r32_26555_c1 nmdc:mga06r32_26555_c1_4206_5360 349
9 3300042876 Ga0451577_0170054 Ga0451577_0170054_473_1711 353
10 3300047318 Ga0495636_0000161 Ga0495636_0000161_14699_15829 358
11 iso_pu_bacteria 2786546548 2787507482 358
12 3300045049 Ga0466959_0130745 Ga0466959_0130745_662_1759 361
13 3300044712 Ga0453684_0093467 Ga0453684_0093467_1212_2366 363
14 3300038735 Ga0400485_10955 Ga0400485_10955_1415_2578 367
15 3300038742 Ga0400486_08846 Ga0400486_08846_5464_6627 367
16 3300039110 Ga0400487_07285 Ga0400487_07285_1397_2560 367
17 iso_pu_bacteria 2929154850 2929155094 374
18 iso_pu_bacteria 2884634485 2884635998 375
19 3300049668 Ga0501233_009207 Ga0501233_009207_480_1625 376
20 3300036647 Ga0316582_0244747 Ga0316582_0244747_37_1170 377
21 3300042876 Ga0451577_0013525 Ga0451577_0013525_5284_6426 378
22 3300045051 Ga0451576_0403828 Ga0451576_0403828_182_1324 378
23 3300009093 Ga0105240_10076604 Ga0105240_100766042 379
24 3300025913 Ga0207695_10028671 Ga0207695_100286716 379
25 3300028563 Ga0265319_1038149 Ga0265319_10381491 379
26 3300028573 Ga0265334_10003439 Ga0265334_100034398 379
27 3300028577 Ga0265318_10047761 Ga0265318_100477611 379
28 3300028800 Ga0265338_10063943 Ga0265338_100639433 379
29 3300031235 Ga0265330_10044361 Ga0265330_100443612 379
30 3300031238 Ga0265332_10009444 Ga0265332_100094447 379
31 3300031240 Ga0265320_10040942 Ga0265320_100409423 379
32 3300031241 Ga0265325_10082009 Ga0265325_100820091 379
33 3300031250 Ga0265331_10052450 Ga0265331_100524502 379
34 3300031344 Ga0265316_10036590 Ga0265316_100365905 379
35 3300031711 Ga0265314_10022195 Ga0265314_100221958 379
36 3300032004 Ga0307414_10000438 Ga0307414_100004386 379
37 3300044712 Ga0453684_0109214 Ga0453684_0109214_581_1720 379
38 iso_pu_bacteria 2891633521 2891633616 379
39 3300044712 Ga0453684_0000373 Ga0453684_0000373_34162_35304 380
40 3300044673 Ga0453683_0016823 Ga0453683_0016823_171_1322 381
41 3300045051 Ga0451576_0030101 Ga0451576_0030101_3986_5137 381
42 3300031238 Ga0265332_10001934 Ga0265332_100019348 382
43 3300031242 Ga0265329_10027151 Ga0265329_100271512 382
44 3300031247 Ga0265340_10008342 Ga0265340_100083422 382
45 3300031712 Ga0265342_10000021 Ga0265342_1000002126 382
46 3300039110 Ga0400487_00454 Ga0400487_00454_369_1517 382
47 3300044656 Ga0466969_0004858 Ga0466969_0004858_3462_4610 382
48 3300044712 Ga0453684_0006204 Ga0453684_0006204_18843_19991 382
49 3300044712 Ga0453684_0091502 Ga0453684_0091502_2005_3153 382
50 3300046472 Ga0495580_0040292 Ga0495580_0040292_1416_2585 382
51 iso_pu_bacteria 2522125168 2522552410 382
52 iso_pu_bacteria 2643221585 2643932536 382
53 iso_pu_bacteria 2643221639 2644219932 382
54 iso_pu_bacteria 2643221656 2644313787 382
55 3300005545 Ga0070695_100214612 Ga0070695_1002146121 383
56 3300006931 Ga0097620_100049725 Ga0097620_1000497253 383
57 3300028653 Ga0265323_10015963 Ga0265323_100159633 383
58 3300031235 Ga0265330_10004179 Ga0265330_100041794 383
59 3300031242 Ga0265329_10008293 Ga0265329_100082933 383
60 3300031249 Ga0265339_10001518 Ga0265339_1000151814 383
61 3300031344 Ga0265316_10001080 Ga0265316_1000108024 383
62 3300031344 Ga0265316_10005101 Ga0265316_1000510112 383
63 3300031712 Ga0265342_10002942 Ga0265342_1000294210 383
64 3300031728 Ga0316578_10068591 Ga0316578_100685912 383
65 3300035398 Ga0316574_0036142 Ga0316574_0036142_1780_2934 383
66 3300038735 Ga0400485_11648 Ga0400485_11648_694_1854 383
67 3300038742 Ga0400486_22247 Ga0400486_22247_702_1862 383
68 3300039093 Ga0400489_78890 Ga0400489_78890_84_1259 383
69 3300039110 Ga0400487_62292 Ga0400487_62292_369_1529 383
70 3300042876 Ga0451577_0000994 Ga0451577_0000994_21543_22697 383
71 3300042876 Ga0451577_0006118 Ga0451577_0006118_946_2103 383
72 3300044712 Ga0453684_0000354 Ga0453684_0000354_129692_130849 383
73 3300044712 Ga0453684_0000568 Ga0453684_0000568_77900_79084 383
74 3300044712 Ga0453684_0004829 Ga0453684_0004829_22533_23690 383
75 3300044712 Ga0453684_0007037 Ga0453684_0007037_16540_17709 383
76 3300046459 Ga0495629_0000009 Ga0495629_0000009_343621_344781 383
77 3300046674 Ga0495588_0064729 Ga0495588_0064729_453_1613 383
78 3300049570 Ga0501033_0039464 Ga0501033_0039464_1507_2715 383
79 3300049586 Ga0501070_0017098 Ga0501070_0017098_3875_5038 383
80 3300049742 Ga0501080_0053460 Ga0501080_0053460_1678_2841 383
81 3300053094 Ga0500566_0112820 Ga0500566_0112820_172_1332 383
82 3300009176 Ga0105242_10063124 Ga0105242_100631245 384
83 3300013296 Ga0157374_10061426 Ga0157374_100614264 384
84 3300015682 Ga0183373_1002 Ga0183373_100259 384
85 3300025934 Ga0207686_10093151 Ga0207686_100931513 384
86 3300045051 Ga0451576_0067923 Ga0451576_0067923_2398_3582 384
87 3300006353 Ga0075370_10000677 Ga0075370_100006774 385
88 3300050496 nmdc:mga07m45_3114_c1 nmdc:mga07m45_3114_c1_2821_3978 385
89 3300046524 Ga0495648_0032066 Ga0495648_0032066_791_1960 386
90 3300046616 Ga0495668_0000009 Ga0495668_0000009_394642_395811 386
91 3300053093 Ga0500651_0015987 Ga0500651_0015987_1604_2773 386
92 3300046538 Ga0495609_0004286 Ga0495609_0004286_2109_3293 387
93 3300046648 Ga0495611_0000011 Ga0495611_0000011_88545_89720 387
94 3300031251 Ga0265327_10081956 Ga0265327_100819562 388
95 3300044658 Ga0466972_0036417 Ga0466972_0036417_195_1379 388
96 3300044683 Ga0466965_0048827 Ga0466965_0048827_428_1612 388
97 3300044683 Ga0466965_0054606 Ga0466965_0054606_294_1472 388
98 3300044719 Ga0466971_0037023 Ga0466971_0037023_816_1994 388
99 3300003322 rootL2_10111781 rootL2_101117814 389
100 3300031730 Ga0307516_10000438 Ga0307516_1000043815 389

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13635

DUF4143

Domain of unknown function (DUF4143)

201

356

0.98

PF13173

AAA_14

AAA domain

44

163

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3irq-assembly1.cif.gz_A crystal structure of a z-z junction 0.7784 191 241
8cll-assembly1.cif.gz_F structural insights into human tfiiic promoter recognition 0.763 193 260
6j05-assembly1.cif.gz_B structures of two arsr as(iii)-responsive repressors: implications for the mechanism of derepression 0.7442 191 271
3df8-assembly1.cif.gz_A-2 the crystal structure of a possible hxlr family transcriptional factor from thermoplasma volcanium gss1 0.7102 191 265
6fi9-assembly1.cif.gz_A crystal structure of a zinc-responsive marr family member, lactococcus lactis zitr 0.6971 186 268
ID Description Score Start End Superfamily
af_P9WLM9_227_382_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9634 178 335 1.10.10.10
af_P9WLM9_227_382_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9574 178 335 1.10.10.10
af_O53329_25_146_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.891 20 136 3.40.50.300
af_I6WYU2_180_359_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8898 159 329 1.10.10.10
af_P9WLM9_70_188_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8743 17 137 3.40.50.300
ID Description Score Start End GO Terms
AF-B9M8Z9-F1-model_v4 ATPase, AAA family 0.9764 2 385 GO:0016887
AF-A0A3C0ULH2-F1-model_v4 ATPase 0.9753 128 386
AF-A0A2M7EF22-F1-model_v4 ATPase 0.9727 2 384 GO:0016887
AF-A0A6C2UQI7-F1-model_v4 AAA+ ATPase domain-containing protein 0.9725 1 384
AF-A0A6B1BK34-F1-model_v4 ATP-binding protein 0.9721 1 389 GO:0005524

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Predicted Structure (AlphaFold2)

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