Scaffold Information

Sample ID 3300005985
Scaffold Ga0081539_10000331
Sample Name Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2
Length 104820
Fam Num 11
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus oxalaticus

CRISPR Details

Start Coordinate: 23007 End Coordinate: 26286
Position Repeat Spacer
23007 TCTCCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC CCAGCGGGTCACCGCTGGCACGCGCTCTCCAGGGGATCGAAA
23086 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC ACGTTGTGCAGATTGATGAAATCTGCGGACGAGTAGGTATCTTCG
23168 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TCGGGATCATCAAGATTTATTCTCGGTGATGTGTTGCCAATGTC
23249 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC CAGCAAAACTCAAAGCAGCCTACAAATCCAAGTTCACGC
23325 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TAGATTTACTGAATTCTCTCCCTGCCAAAGATGCTGCT
23400 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC CCGACGGGTCAGTGTACAGTTTGATGTTCCGTCAAATGTGAGTGAG
23483 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC CATGGGAAAAGAATAAACCTTGGGTTAAATCGCAGGGGAAGAATC
23565 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GTGTCGTCCTTGTACCAGTGCCATCAGATCGATTTTTCTC
23642 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TTGGATGAGATGGCGAGCTTCGTGCTTGGGCATGAAGC
23717 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC CATGAATTGCTCGCTTTCGGGGAAAAGTATCCTGATGTTC
23794 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TAAAACTGGCCGGATGATTGGTAGTAAGATCATGCTCTCGGAAGC
23876 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GAGAAACTCACGAAAAGAGATCGTCCAACAGTGTGTTGGACAGCGT
23959 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC CACAACTATTTCGCACAGCTTGCATTGAGGGGCTGCGATC
24036 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TTTTCCGTTGTACCTGGGGTTCGCGGAGGGGTTTGACCCAAAC
24116 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GGGGTGGCGATACGACGGCAATACCCGACAATGGCTTGT
24192 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TGTCCGAGTATGAGTGGCAACGTCATAAACGTTGGGTAGATGC
24272 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC AGTAATATGTGGGAGCGTCACAAGTTCCCAAATGGTGAAACTCAT
24354 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TCGCGGCGCTGCAAGCTGAACATCGGAGCGGAGAAGTTC
24430 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TGAATGCAGATGATGAATGGGATGCGTTGGGAGCGCTCCAGC
24509 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GAGGGAGTCAAACAGGATGCGACTGGTCGCAAATTCT
24583 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TTCCTGTCGATCCCTTCTGAAAGTGATAGAGCCTTCCTCAAGACG
24665 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GAAAGATAGCTACCGCATTTGCGATAGCCTCCCCCCTTGTGAAT
24746 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GGTGGTTATTACGACCGCGGCTATAACTATGTCCCCTGGTAACTAA
24829 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC CTATTGAAATGAGTTTGGATGAAATATTGACAAGAATGCAAGC
24909 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TCATTGCCCGTTTCGAAGGCGGGCTTGTCGTACGAGTTTAT
24987 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GCAGATGGTGCGGAAGATACTTGCCCTGTCAGCGAAGCCAT
25065 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TTTATTTGGCGTGTACTGGATGCGCGGCTTCCCAGCCGC
25141 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC ACGACCGTGAGCCTAGTAATATGTGGGAGCGTCACAAGCTT
25219 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GATTTAAGCCATAATGTCGCTGAAATCCATCCGATCGTTTCAAT
25300 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GCTGATGCGAGAGGGGAGAACTGATGGGATACTTCTGTCAGCTT
25381 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC ATTCTCCTAAACGAAAATTACCCCAATGCCCAACGC
25454 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC AGAGAACGCAACAACTCCGCTTGCACCTTCTACAAACAAATAATAG
25537 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TTTAATGGACGTACGTAAGCTCAACGGGGCTTACAGTACCGA
25616 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TTTGGTTCAAGTTCTCCGATCGCTACCGATCATTGCCTGGAAAGT
25698 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GAGAACCGACAAGAAAGATCCGACCTTGTCAACGATAAT
25774 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC AATCGCGACAAGGTTAAGCTGGAGGTTGAAGGCGGAGGATTAAT
25855 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC GTCAGCGGATACAATGCCGCCGGCGGCTTCGAGGTGGTGGT
25933 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC AAGACTTCAATTGAAGTTACGGAGCTGGTTGCCCAAGCAC
26010 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TCTCTGAGTGGGAAGAACATTTCCGATATGTCTGTACGAGAAGTT
26092 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC TACGTATGAATTTGTCCTTAAGGAGCTTTGTTATGCGT
26167 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC CTGGGCATCCAAATATGAGCGGAGGAGACTAAAAAAGTCTCCAAT
26249 GTTTCAATTTCCTACCTCATTCGAGCGGAAGTCTCAC -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F092549 , F268667 , F298200 , F392517 , F392597 , F449249 , F470723 , F487464 , F492246 , F493884 , F497173