Scaffold Information

Sample ID 3300005338
Scaffold Ga0068868_100000019
Sample Name Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2
Length 92673
Fam Num 11
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. R1

CRISPR Details

Start Coordinate: 86821 End Coordinate: 87509
Position Repeat Spacer
86821 TCAACGACCTTGCGCCCCTGGCCGGGCT GACCAGTCTTCAGTCGCTCGATTGCAGCCGGACCAGGG
86887 TCAATGACCTTGCGCCCCTGGCCGGGCT GACCAACCTTCAGTTACTCGACTGCGGCGGTACCCAGGTTGGCAATCTGGCGCCGCTGGCTATGCTTTCCAACCTTCAGTCGCTCAACTGCGGCCGCACCCAGA
87019 TCAACGATCTTGCGCCGCTAGCCGAGCT CACCAGCCTCCAAACCCTCACCTGCGGAAGCACCCAAG
87085 TCAGCGATCTTGCGCCGCTAGCCGGGCT CGACAGCCTCCAATCGCTCGATTGCGCGGACACCAAGG
87151 TCAGCGATCTTGCGCCGTTGGCCAGACT TGCTAGGCTCCACTCGCTCAACTGCTATGGCACCCGGA
87217 TCAGCAATCTTGCGCCGTTGGCTGGGCT TACCAATCTCCGATCGCTCGATTGCAACATTACCCCGG
87283 TGAGCGATCTTGCGCCGCTGACCGGGCT CCGCCGCCTCCAATCGCTCAAATGCATTCTGACCCAAG
87349 TAAGCGATCTTGGACCACTGGCCGGGAT CGACAGCCTTCAATCGCTGGATTGCCACGGTACGCAGG
87415 TCAGCGATCTTACGCCGCTGGCCGGGCT CGACAATCTTGAATCGCTCGTCTGCTGGAGCACCGGGG
87481 TCAGCGACGTTGCCCCGCTCGCCAGCCT -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F425893 , F425984 , F451891 , F455904 , F469988 , F486537 , F490225 , F490482 , F492210 , F492871 , F493456