F445853

General Info

Members Datasets Scaffolds Average Seq Length
446 345 208 612

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054460903|8054463467
Length 716
Sequence DFAYRPFERLIRPLDIPYRPIPSQGPFHLLLHFVRMFRGVLLAISVFAMLMEATNLFLIWSFSAIVDGVTAKGAAAFLQSEWPLLTIMVVLLFPVQPLLSFMANTLTSQTVAVCMPAAIQWQGHKAVERQDIGFFHDLFAGQVASRLSQAASAVQQQVTVAFYSIPYFLVQFVGSLVLLSTVAWPLALPVLVWIVVSIAIAVMAVPKFSELARRSAKKRSLLVGSMTDLYSNIQMVKQFAAEDSEAGALRKVFTEVIDTQHRERRVYLTTSTAILLLNVVLWIAMLSIGFWGMVDGFVTTGQFAGSIYLTQRLSANARAFLEMGQQIFQAIGTIKDAMPVMTTLPTIVDAPDAKPLIVARGEINFEQVHFAYRAEKTVIDHLTLKVAAGEKVGLVGLSGAGKTTLVNLLLRFYEPGQGNISIDGQSIQSVTQASLRENIGVISQDVSLLHRSVGDNIRYGRPDASHEEIATAARAAQADGFIADLADSEGRRGYDAFVGDRGVKLSGGQRQRVAIARVLLKDAPILILDEATSALDSESEAAIQEKLDMLMTGKTVIAIAHRLSTIARMDRIVVLDKGRIVEEGSPTALLAQGGLYARLWQRQTGGYIGEEDSAVEPVLRPDSSLRVDELPDPTDRDAIVAFALSFNGYQHFGSFNAASDAAQASKRQTLVDLRNELFMAFRGSNHRMDDDFLETYRELLPLLKAAIARDNGGAAD

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
3 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
4 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
5 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
6 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
7 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
8 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
9 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
10 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
11 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
12 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
13 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
14 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
15 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
16 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
17 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
18 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
19 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
20 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
21 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
22 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
23 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
24 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
25 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
26 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
27 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
28 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
29 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
30 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
31 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
32 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
33 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
34 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
35 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
36 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
37 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
38 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
39 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
40 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
41 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
42 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
43 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
44 2643221557 Ensifer sp. Root558 Isolate Unclassified
45 2643221568 Rhizobium sp. Root564 Isolate Unclassified
46 2643221582 Rhizobium sp. Root651 Isolate Unclassified
47 2643221618 Ensifer sp. Root231 Isolate Unclassified
48 2643221626 Ensifer sp. Root31 Isolate Unclassified
49 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
50 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
51 2643221655 Ensifer sp. Root1252 Isolate Unclassified
52 2643221659 Ensifer sp. Root127 Isolate Unclassified
53 2643221698 Ensifer sp. Root142 Isolate Unclassified
54 2643221712 Ensifer sp. Root258 Isolate Unclassified
55 2643221723 Ensifer sp. Root278 Isolate Unclassified
56 2718217882 Rhizobium sp. N741 Isolate Nodule
57 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
58 2718218009 Rhizobium sp. N561 Isolate Nodule
59 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
60 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
61 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
62 2718218363 Rhizobium sp. N113 Isolate Nodule
63 2718218366 Rhizobium sp. N621 Isolate Nodule
64 2718218423 Rhizobium sp. N941 Isolate Nodule
65 2721755514 Rhizobium sp. N6212 Isolate Nodule
66 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
67 2721755809 Rhizobium sp. N541 Isolate Nodule
68 2721755810 Rhizobium sp. N871 Isolate Nodule
69 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
70 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
71 2728369365 Rhizobium sp. N1341 Isolate Nodule
72 2728369397 Rhizobium sp. N1314 Isolate Nodule
73 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
74 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
75 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
76 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
77 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
78 2791355256 Rhizobium sp. M10 Isolate Nodule
79 2791355260 Rhizobium sp. L9 Isolate Nodule
80 2791355261 Rhizobium sp. J15 Isolate Nodule
81 2791355262 Rhizobium sp. M1 Isolate Nodule
82 2791355264 Rhizobium sp. S9 Isolate Nodule
83 2791355265 Rhizobium sp. H4 Isolate Nodule
84 2791355266 Rhizobium sp. L43 Isolate Nodule
85 2791355267 Rhizobium sp. L18 Isolate Nodule
86 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
87 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
88 2802429633 Rhizobium anhuiense J3 Isolate Nodule
89 2802429634 Rhizobium anhuiense S10 Isolate Nodule
90 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
91 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
92 2802429637 Rhizobium anhuiense C15 Isolate Nodule
93 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
94 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
95 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
96 2838042994 Rhizobium esperanzae SEMIA 4089 Isolate Nodule
97 2838048938 Rhizobium pisi 27/80 Isolate Nodule
98 2838061910 Rhizobium phaseoli L15 Isolate Nodule
99 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
100 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
101 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
102 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
103 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
104 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
105 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
106 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
107 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
108 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
109 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
110 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
111 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
112 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
113 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
114 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
115 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
116 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
117 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
118 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
119 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
120 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
121 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
122 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
123 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
124 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
125 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
126 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
127 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
128 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
129 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
130 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
131 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
132 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
133 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
134 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
135 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
136 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
137 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
138 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
139 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
140 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
141 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
142 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
143 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
144 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
145 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
146 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
147 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
148 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
149 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
150 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
151 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
152 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
153 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
154 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
155 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
156 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
157 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
158 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
159 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
160 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
161 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
162 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
163 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
164 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
165 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
166 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
167 2844163670 Ensifer sp. 1H6 Isolate Unclassified
168 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
169 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
170 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
171 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
172 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
173 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
174 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
175 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
176 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
177 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
178 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
179 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
180 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
181 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
182 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
183 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
184 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
185 2933599457 Rhizobium phaseoli M3 Isolate Nodule
186 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
187 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
188 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
189 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
190 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
191 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
192 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
193 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
194 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
195 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
196 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
197 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
198 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
199 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
200 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
201 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
202 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
203 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
204 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
205 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
206 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
207 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
208 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
209 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
210 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
211 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
212 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
213 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
214 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
215 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
216 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
217 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
218 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
219 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
220 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
221 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
222 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
223 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
224 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
225 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
226 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
227 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
228 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
229 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
230 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
231 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
232 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
233 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
234 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
235 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
236 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
237 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
238 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
239 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
240 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
241 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
242 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
243 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
244 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
245 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
246 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
247 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
248 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
249 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
250 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
251 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
252 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
253 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
254 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
255 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
256 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
257 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
258 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
259 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
260 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
261 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
262 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
263 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
264 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
265 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
266 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
267 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
268 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
269 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
270 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
271 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
272 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
273 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
274 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
275 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
276 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
277 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
278 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
279 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
280 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
281 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
282 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
283 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
284 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
285 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
286 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
287 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
288 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
289 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
290 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
291 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
292 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
293 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
294 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
295 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
296 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
297 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
298 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
299 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
300 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
301 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
302 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
303 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
304 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
305 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
306 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
307 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
308 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
309 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
310 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
311 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
312 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
313 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
314 8005275841 Rhizobium sp. N4311 Isolate Nodule
315 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
316 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
317 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
318 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
319 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
320 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
321 8005382845 Rhizobium sp. R634 Isolate Nodule
322 8005395548 Rhizobium sp. R339 Isolate Nodule
323 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
324 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
325 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
326 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
327 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
328 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
329 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
330 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
331 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
332 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
333 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
334 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
335 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
336 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
337 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
338 8018176218 Rhizobium sp. N122 Isolate Nodule
339 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
340 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
341 8024501048 Rhizobium sp. H4 Isolate Nodule
342 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
343 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
344 8056382006 Rhizobium croatiense 13T Isolate Nodule
345 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 46.64
Metatranscriptomes 0
Isolates 53.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.65
Nodule 37.67
Rhizoplane 1.57
Rhizosphere 14.57
Stem 0
Stem Tuber 0
Unclassified 23.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1001701 3300002737 Bacteria 10705
2 JGI25158J39367_1000024 3300002739 Bacteria 35027
3 JGI25152J39213_1000569 3300002773 Bacteria 20155
4 JGI25159J45721_1000025 3300002987 Bacteria 115802
5 JGI25159J45721_1001314 3300002987 Bacteria 10488
6 JGI25151J46595_10000208 3300003187 Bacteria 71857
7 JGI25151J46595_10006545 3300003187 Bacteria 5839
8 JGI25165J46597_1000920 3300003214 Bacteria 20377
9 JGI25153J46596_10002659 3300003215 Bacteria 10212
10 JGI25153J46596_10004115 3300003215 Bacteria 7914
11 rootH1_10004271 3300003316 Bacteria 10758
12 rootH2_10014980 3300003320 Bacteria 12651
13 rootL2_10006749 3300003322 Bacteria 38317
14 JGI25160J50197_1000065 3300003354 Bacteria 115802
15 JGI25160J50197_1001015 3300003354 Bacteria 14562
16 JGI25160J50197_1007213 3300003354 Bacteria 4376
17 JGI25161J50226_1000107 3300003374 Bacteria 65408
18 JGI25161J50226_1000619 3300003374 Bacteria 14562
19 Ga0055542_1001135 3300003762 Bacteria 15807
20 Ga0055526_1000560 3300003771 Bacteria 29425
21 Ga0055526_1002054 3300003771 Bacteria 13840
22 Ga0055526_1009535 3300003771 Bacteria 4653
23 Ga0055524_1000626 3300003775 Bacteria 25314
24 Ga0055524_1010990 3300003775 Bacteria 3565
25 Ga0055528_1000100 3300003790 Bacteria 68303
26 Ga0055528_1000157 3300003790 Bacteria 56936
27 Ga0055528_1014287 3300003790 Bacteria 2946
28 Ga0055540_1001510 3300003792 Bacteria 13791
29 Ga0055531_10008549 3300003794 Bacteria 5374
30 Ga0058692_1000535 3300003856 Bacteria 16314
31 Ga0055543_1000134 3300004625 Bacteria 61585
32 Ga0055543_1000458 3300004625 Bacteria 24122
33 Ga0055543_1000861 3300004625 Bacteria 14600
34 Ga0055543_1001553 3300004625 Bacteria 8898
35 Ga0065165_1000090 3300005262 Bacteria 150368
36 Ga0065165_1002632 3300005262 Bacteria 14600
37 Ga0081539_10003601 3300005985 Bacteria 18738
38 Ga0075362_10009807 3300006177 Bacteria 3716
39 Ga0075367_10000507 3300006178 Bacteria 14680
40 Ga0075369_10013855 3300006186 Bacteria 3210
41 Ga0075366_10009220 3300006195 Bacteria 5507
42 Ga0075370_10008978 3300006353 Bacteria 5169
43 Ga0099826_10003095 3300006948 Bacteria 11133
44 Ga0105240_10000014 3300009093 Bacteria 482033
45 Ga0105243_10098722 3300009148 Bacteria 2419
46 Ga0105237_10002158 3300009545 Bacteria 24754
47 Ga0123341_1000070 3300009765 Bacteria 43628
48 Ga0123342_1020422 3300009766 Bacteria 4842
49 Ga0157371_10004400 3300013102 Bacteria 12315
50 Ga0157370_10000208 3300013104 Bacteria 74371
51 Ga0157370_10002430 3300013104 Bacteria 22453
52 Ga0182007_10003718 3300015262 Bacteria 7131
53 Ga0209436_100011 3300025208 Bacteria 139405
54 Ga0209437_100153 3300025233 Bacteria 154068
55 Ga0207425_1000024 3300025245 Bacteria 328978
56 Ga0207425_1001406 3300025245 Bacteria 10113
57 Ga0207425_1011715 3300025245 Bacteria 2079
58 Ga0209677_100540 3300025253 Bacteria 21044
59 Ga0209148_1000136 3300025254 Bacteria 169088
60 Ga0209129_1000133 3300025258 Bacteria 126018
61 Ga0209129_1000244 3300025258 Bacteria 57688
62 Ga0209129_1000256 3300025258 Bacteria 55133
63 Ga0209129_1000579 3300025258 Bacteria 25226
64 Ga0209129_1000727 3300025258 Bacteria 21221
65 Ga0209233_1000175 3300025261 Bacteria 144221
66 Ga0209233_1000228 3300025261 Bacteria 100100
67 Ga0209455_1000085 3300025272 Bacteria 247601
68 Ga0209673_1000067 3300025273 Bacteria 249077
69 Ga0209673_1000385 3300025273 Bacteria 79491
70 Ga0209673_1000522 3300025273 Bacteria 62876
71 Ga0209673_1001901 3300025273 Bacteria 16750
72 Ga0209130_1000079 3300025284 Bacteria 167669
73 Ga0209130_1000081 3300025284 Bacteria 166440
74 Ga0209130_1000459 3300025284 Bacteria 42729
75 Ga0209025_1000050 3300025294 Bacteria 331531
76 Ga0209025_1000058 3300025294 Bacteria 311398
77 Ga0209025_1000177 3300025294 Bacteria 158173
78 Ga0209025_1002177 3300025294 Bacteria 21759
79 Ga0209025_1002376 3300025294 Bacteria 20141
80 Ga0209564_1000092 3300025295 Bacteria 249018
81 Ga0209564_1000118 3300025295 Bacteria 205431
82 Ga0209564_1000132 3300025295 Bacteria 191966
83 Ga0209564_1002927 3300025295 Bacteria 12409
84 Ga0209564_1004660 3300025295 Bacteria 8236
85 Ga0209758_1000366 3300025297 Bacteria 80263
86 Ga0209758_1000421 3300025297 Bacteria 71884
87 Ga0209758_1000463 3300025297 Bacteria 67158
88 Ga0209758_1001154 3300025297 Bacteria 33798
89 Ga0209758_1001254 3300025297 Bacteria 31419
90 Ga0209758_1006616 3300025297 Bacteria 8212
91 Ga0209050_1007240 3300025298 Bacteria 6292
92 Ga0209256_1000160 3300025299 Bacteria 138781
93 Ga0209256_1000170 3300025299 Bacteria 130504
94 Ga0209256_1004282 3300025299 Bacteria 9094
95 Ga0209256_1008631 3300025299 Bacteria 4671
96 Ga0207426_1000008 3300025302 Bacteria 848730
97 Ga0207426_1000147 3300025302 Bacteria 190586
98 Ga0207426_1000167 3300025302 Bacteria 167669
99 Ga0207426_1000651 3300025302 Bacteria 42741
100 Ga0209051_1000418 3300025303 Bacteria 58817
101 Ga0209051_1000602 3300025303 Bacteria 42068
102 Ga0209051_1011448 3300025303 Bacteria 4377
103 Ga0209257_1002622 3300025304 Bacteria 17353
104 Ga0207695_10000037 3300025913 Bacteria 476303
105 Ga0207671_10001017 3300025914 Bacteria 34299
106 Ga0207650_10004668 3300025925 Bacteria 9367
107 Ga0207644_10080846 3300025931 Bacteria 2401
108 Ga0209371_1001372 3300027312 Bacteria 16799
109 Ga0209371_1002926 3300027312 Bacteria 8914
110 Ga0209282_1005731 3300027666 Bacteria 7660
111 Ga0268256_1000478 3300030500 Bacteria 34415
112 Ga0268256_1001789 3300030500 Bacteria 12095
113 Ga0307513_10120151 3300031456 Bacteria 2598
114 Ga0307405_10006913 3300031731 Bacteria 5628
115 Ga0307412_10067848 3300031911 Bacteria 2423
116 Ga0439465_0011310 3300041413 Bacteria 2801
117 Ga0451833_1018703 3300041491 Bacteria 5648
118 Ga0451837_0483360 3300041494 Bacteria 4412
119 Ga0451841_0067735 3300041498 Bacteria 4737
120 Ga0451841_0749762 3300041498 Bacteria 4335
121 Ga0451845_0499884 3300041501 Bacteria 4211
122 Ga0451849_0831508 3300041505 Bacteria 4270
123 Ga0451851_0756783 3300041507 Bacteria 3986
124 Ga0451843_0361196 3300041509 Bacteria 2382
125 Ga0495638_0000560 3300046460 Bacteria 42333
126 Ga0495605_0003976 3300046474 Bacteria 8734
127 Ga0495585_0009758 3300046492 Bacteria 5746
128 Ga0495585_0010524 3300046492 Bacteria 5502
129 Ga0495585_0018840 3300046492 Bacteria 3982
130 Ga0495606_0029192 3300046507 Bacteria 3877
131 Ga0495631_0002382 3300046518 Bacteria 10659
132 Ga0495633_0019798 3300046558 Bacteria 3397
133 Ga0495668_0005077 3300046616 Bacteria 9059
134 Ga0495668_0031102 3300046616 Bacteria 3009
135 Ga0495611_0012179 3300046648 Bacteria 3656
136 Ga0495625_0003640 3300046660 Bacteria 15113
137 Ga0495661_0037014 3300046665 Bacteria 3049
138 Ga0495588_0007056 3300046674 Bacteria 5093
139 Ga0495660_0013894 3300046810 Bacteria 4667
140 Ga0495672_0026004 3300047320 Bacteria 3740
141 Ga0495687_028962 3300047443 Bacteria 2568
142 Ga0495681_0007411 3300047470 Bacteria 7015
143 Ga0496105_0048633 3300048908 Bacteria 3500
144 Ga0496106_0000038 3300048909 Bacteria 111983
145 Ga0496111_0000470 3300048914 Bacteria 20544
146 Ga0496116_0000042 3300048919 Bacteria 330516
147 Ga0496116_0004401 3300048919 Bacteria 13471
148 Ga0496116_0014885 3300048919 Bacteria 6179
149 Ga0496116_0017368 3300048919 Bacteria 5585
150 Ga0496116_0045451 3300048919 Bacteria 2972
151 Ga0496117_0000411 3300048920 Bacteria 72032
152 Ga0496117_0014556 3300048920 Bacteria 6769
153 Ga0496117_0037888 3300048920 Bacteria 3585
154 Ga0496117_0047311 3300048920 Bacteria 3085
155 Ga0496118_0001899 3300048921 Bacteria 29780
156 Ga0496118_0002239 3300048921 Bacteria 26620
157 Ga0496118_0011386 3300048921 Bacteria 8687
158 Ga0496118_0016018 3300048921 Bacteria 6902
159 Ga0496118_0034947 3300048921 Bacteria 4091
160 Ga0496118_0097770 3300048921 Bacteria 1996
161 Ga0496119_0000228 3300048922 Bacteria 78785
162 Ga0496119_0004105 3300048922 Bacteria 14680
163 Ga0496119_0036436 3300048922 Bacteria 3211
164 Ga0496120_0000556 3300048923 Bacteria 56898
165 Ga0496121_0007053 3300048924 Bacteria 13646
166 Ga0496121_0018098 3300048924 Bacteria 7128
167 Ga0496121_0030381 3300048924 Bacteria 4962
168 Ga0496121_0057155 3300048924 Bacteria 3235
169 Ga0496122_0000831 3300048925 Bacteria 58597
170 Ga0496122_0003171 3300048925 Bacteria 21952
171 Ga0496122_0010164 3300048925 Bacteria 9753
172 Ga0496122_0014054 3300048925 Bacteria 7772
173 Ga0496122_0037547 3300048925 Bacteria 3896
174 Ga0496122_0038366 3300048925 Bacteria 3840
175 Ga0496122_0043829 3300048925 Bacteria 3500
176 Ga0496122_0045577 3300048925 Bacteria 3407
177 Ga0496123_0000637 3300048926 Bacteria 58599
178 Ga0496123_0010160 3300048926 Bacteria 8357
179 Ga0496123_0022997 3300048926 Bacteria 4786
180 Ga0496123_0078696 3300048926 Bacteria 2018
181 Ga0496124_0000083 3300048927 Bacteria 207798
182 Ga0496124_0000676 3300048927 Bacteria 56040
183 Ga0496124_0004615 3300048927 Bacteria 15952
184 Ga0496124_0009560 3300048927 Bacteria 9963
185 Ga0496124_0025166 3300048927 Bacteria 5396
186 Ga0496124_0049073 3300048927 Bacteria 3602
187 Ga0496124_0061999 3300048927 Bacteria 3131
188 Ga0496124_0068244 3300048927 Bacteria 2956
189 Ga0496125_0000680 3300048928 Bacteria 56712
190 Ga0496125_0014374 3300048928 Bacteria 7713
191 Ga0496125_0023024 3300048928 Bacteria 5766
192 Ga0496125_0041816 3300048928 Bacteria 3913
193 Ga0496125_0047780 3300048928 Bacteria 3574
194 Ga0496126_0000559 3300048929 Bacteria 71584
195 Ga0496126_0000815 3300048929 Bacteria 55703
196 nmdc:mga0yw44_70_c1 3300050492 Bacteria 37132
197 nmdc:mga0k408_3714_c1 3300050493 Bacteria 8087
198 nmdc:mga06z11_452_c1 3300050494 Bacteria 15322
199 nmdc:mga0sz30_2154_c1 3300050516 Bacteria 7033
200 Ga0500578_0013428 3300053086 Bacteria 5274
201 Ga0500618_005028 3300053125 Bacteria 4084
202 Ga0500658_0000853 3300053134 Bacteria 12513
203 Ga0500561_0000113 3300053137 Bacteria 15598
204 Ga0500616_0001225 3300053153 Bacteria 25824
205 Ga0500622_0000367 3300053156 Bacteria 43429
206 Ga0500633_0006569 3300053160 Bacteria 2862
207 Ga0500636_0000005 3300053177 Bacteria 197561
208 Ga0500636_0001925 3300053177 Bacteria 11398

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048921 Ga0496118_0097770 Ga0496118_0097770_23_1531 463
2 3300003856 Ga0058692_1000535 Ga0058692_100053527 559
3 3300027312 Ga0209371_1001372 Ga0209371_10013722 559
4 3300030500 Ga0268256_1000478 Ga0268256_100047819 559
5 3300047470 Ga0495681_0007411 Ga0495681_0007411_964_2814 563
6 3300006948 Ga0099826_10003095 Ga0099826_1000309511 564
7 3300027666 Ga0209282_1005731 Ga0209282_10057317 564
8 3300009545 Ga0105237_10002158 Ga0105237_1000215819 566
9 3300025914 Ga0207671_10001017 Ga0207671_100010178 566
10 3300048924 Ga0496121_0030381 Ga0496121_0030381_2543_4396 566
11 3300003316 rootH1_10004271 rootH1_100042713 570
12 3300003320 rootH2_10014980 rootH2_1001498010 570
13 3300003322 rootL2_10006749 rootL2_1000674929 570
14 iso_pu_bacteria 2842264693 2842265774 572
15 iso_pu_bacteria 2842428310 2842429589 572
16 iso_pu_bacteria 2842434925 2842436202 572
17 iso_pu_bacteria 2842441272 2842442549 572
18 iso_pu_bacteria 2842462802 2842464010 572
19 iso_pu_bacteria 2842469257 2842470531 572
20 3300046492 Ga0495585_0018840 Ga0495585_0018840_945_2822 574
21 3300041491 Ga0451833_1018703 Ga0451833_1018703_1420_3300 575
22 3300041498 Ga0451841_0749762 Ga0451841_0749762_1650_3530 575
23 3300041507 Ga0451851_0756783 Ga0451851_0756783_2056_3936 575
24 3300046674 Ga0495588_0007056 Ga0495588_0007056_339_2189 577
25 3300003762 Ga0055542_1001135 Ga0055542_100113518 578
26 3300025254 Ga0209148_1000136 Ga0209148_1000136104 578
27 3300025272 Ga0209455_1000085 Ga0209455_100008517 578
28 3300027312 Ga0209371_1002926 Ga0209371_100292610 578
29 3300046474 Ga0495605_0003976 Ga0495605_0003976_5762_7615 578
30 3300046492 Ga0495585_0010524 Ga0495585_0010524_3558_5411 578
31 3300046518 Ga0495631_0002382 Ga0495631_0002382_5453_7306 578
32 3300046616 Ga0495668_0005077 Ga0495668_0005077_3088_4941 578
33 3300046648 Ga0495611_0012179 Ga0495611_0012179_832_2685 578
34 3300046660 Ga0495625_0003640 Ga0495625_0003640_7775_9628 578
35 3300046810 Ga0495660_0013894 Ga0495660_0013894_582_2435 578
36 3300025245 Ga0207425_1011715 Ga0207425_10117151 582
37 3300025258 Ga0209129_1000727 Ga0209129_100072720 582
38 3300025294 Ga0209025_1002376 Ga0209025_100237620 582
39 3300025297 Ga0209758_1000463 Ga0209758_100046318 582
40 3300025931 Ga0207644_10080846 Ga0207644_100808463 582
41 3300009093 Ga0105240_10000014 Ga0105240_10000014229 584
42 3300013104 Ga0157370_10002430 Ga0157370_100024304 584
43 3300015262 Ga0182007_10003718 Ga0182007_100037183 584
44 3300025253 Ga0209677_100540 Ga0209677_10054019 584
45 3300025261 Ga0209233_1000228 Ga0209233_100022882 584
46 3300025295 Ga0209564_1004660 Ga0209564_10046605 584
47 3300025299 Ga0209256_1008631 Ga0209256_10086313 584
48 3300025913 Ga0207695_10000037 Ga0207695_10000037230 584
49 3300048908 Ga0496105_0048633 Ga0496105_0048633_915_2783 584
50 3300048919 Ga0496116_0045451 Ga0496116_0045451_425_2293 584
51 3300048920 Ga0496117_0047311 Ga0496117_0047311_1203_3056 584
52 3300048921 Ga0496118_0034947 Ga0496118_0034947_790_2643 584
53 3300048922 Ga0496119_0036436 Ga0496119_0036436_493_2361 584
54 3300048925 Ga0496122_0037547 Ga0496122_0037547_1153_3021 584
55 3300048925 Ga0496122_0038366 Ga0496122_0038366_540_2393 584
56 3300048927 Ga0496124_0049073 Ga0496124_0049073_796_2664 584
57 3300048928 Ga0496125_0047780 Ga0496125_0047780_1101_2969 584
58 3300046460 Ga0495638_0000560 Ga0495638_0000560_23723_25576 585
59 3300046665 Ga0495661_0037014 Ga0495661_0037014_1006_2883 585
60 3300047320 Ga0495672_0026004 Ga0495672_0026004_641_2494 585
61 3300053153 Ga0500616_0001225 Ga0500616_0001225_6381_8234 585
62 3300046558 Ga0495633_0019798 Ga0495633_0019798_170_2050 586
63 3300002739 JGI25158J39367_1000024 JGI25158J39367_10000242 587
64 3300003374 JGI25161J50226_1000107 JGI25161J50226_10001075 587
65 3300003790 Ga0055528_1014287 Ga0055528_10142873 587
66 3300004625 Ga0055543_1000458 Ga0055543_10004586 587
67 3300025208 Ga0209436_100011 Ga0209436_10001132 587
68 3300025284 Ga0209130_1000081 Ga0209130_1000081106 587
69 3300025302 Ga0207426_1000008 Ga0207426_1000008586 587
70 3300053125 Ga0500618_005028 Ga0500618_005028_327_2183 587
71 3300003775 Ga0055524_1010990 Ga0055524_10109902 588
72 3300030500 Ga0268256_1001789 Ga0268256_100178912 589
73 3300048925 Ga0496122_0043829 Ga0496122_0043829_1117_2970 589
74 3300048926 Ga0496123_0078696 Ga0496123_0078696_49_1902 589
75 3300003794 Ga0055531_10008549 Ga0055531_100085493 590
76 3300025294 Ga0209025_1000177 Ga0209025_1000177111 590
77 3300025295 Ga0209564_1002927 Ga0209564_10029277 590
78 3300003187 JGI25151J46595_10006545 JGI25151J46595_100065456 591
79 3300003354 JGI25160J50197_1007213 JGI25160J50197_10072132 591
80 3300003771 Ga0055526_1002054 Ga0055526_10020545 591
81 3300003775 Ga0055524_1000626 Ga0055524_100062617 591
82 3300003790 Ga0055528_1000157 Ga0055528_100015737 591
83 3300004625 Ga0055543_1001553 Ga0055543_10015538 591
84 3300006177 Ga0075362_10009807 Ga0075362_100098073 591
85 3300006178 Ga0075367_10000507 Ga0075367_1000050716 591
86 3300006186 Ga0075369_10013855 Ga0075369_100138552 591
87 3300006353 Ga0075370_10008978 Ga0075370_100089783 591
88 3300025258 Ga0209129_1000579 Ga0209129_100057920 591
89 3300025273 Ga0209673_1000385 Ga0209673_100038535 591
90 3300025294 Ga0209025_1000058 Ga0209025_100005816 591
91 3300025295 Ga0209564_1000118 Ga0209564_1000118129 591
92 3300025297 Ga0209758_1000366 Ga0209758_100036624 591
93 3300025299 Ga0209256_1000160 Ga0209256_1000160114 591
94 3300025302 Ga0207426_1000147 Ga0207426_1000147185 591
95 3300025303 Ga0209051_1000602 Ga0209051_100060236 591
96 3300050494 nmdc:mga06z11_452_c1 nmdc:mga06z11_452_c1_7839_9719 591
97 3300050516 nmdc:mga0sz30_2154_c1 nmdc:mga0sz30_2154_c1_2881_4761 591
98 3300053134 Ga0500658_0000853 Ga0500658_0000853_3234_5114 591
99 3300002987 JGI25159J45721_1000025 JGI25159J45721_100002521 592
100 3300003354 JGI25160J50197_1000065 JGI25160J50197_100006521 592
101 3300003771 Ga0055526_1000560 Ga0055526_10005605 592
102 3300004625 Ga0055543_1000134 Ga0055543_100013417 592
103 3300005262 Ga0065165_1000090 Ga0065165_100009095 592
104 3300005985 Ga0081539_10003601 Ga0081539_100036018 592
105 3300025284 Ga0209130_1000079 Ga0209130_100007995 592
106 3300025295 Ga0209564_1000132 Ga0209564_100013220 592
107 3300025299 Ga0209256_1004282 Ga0209256_10042826 592
108 3300025302 Ga0207426_1000167 Ga0207426_100016733 592
109 3300048914 Ga0496111_0000470 Ga0496111_0000470_7598_9445 592
110 3300048927 Ga0496124_0025166 Ga0496124_0025166_3251_5098 592
111 iso_pu_bacteria 8005395548 8005402210 592
112 3300002987 JGI25159J45721_1001314 JGI25159J45721_10013146 594
113 3300003215 JGI25153J46596_10004115 JGI25153J46596_100041152 594
114 3300025273 Ga0209673_1001901 Ga0209673_100190117 594
115 3300025297 Ga0209758_1006616 Ga0209758_10066167 594
116 3300025303 Ga0209051_1011448 Ga0209051_10114481 594
117 3300041501 Ga0451845_0499884 Ga0451845_0499884_1647_3539 594
118 3300046507 Ga0495606_0029192 Ga0495606_0029192_1977_3857 594
119 3300053086 Ga0500578_0013428 Ga0500578_0013428_3072_4952 594
120 3300003187 JGI25151J46595_10000208 JGI25151J46595_1000020867 597
121 3300025245 Ga0207425_1000024 Ga0207425_10000245 597
122 3300025258 Ga0209129_1000133 Ga0209129_1000133109 597
123 3300025294 Ga0209025_1000050 Ga0209025_1000050322 597
124 3300025297 Ga0209758_1000421 Ga0209758_100042167 597
125 3300048919 Ga0496116_0004401 Ga0496116_0004401_2296_4161 597
126 3300048920 Ga0496117_0014556 Ga0496117_0014556_2609_4474 597
127 3300048924 Ga0496121_0007053 Ga0496121_0007053_2296_4161 597
128 3300048925 Ga0496122_0014054 Ga0496122_0014054_3612_5477 597
129 3300048927 Ga0496124_0004615 Ga0496124_0004615_2296_4161 597
130 3300048928 Ga0496125_0014374 Ga0496125_0014374_2274_4139 597
131 iso_pu_bacteria 2599185236 2599721667 597
132 iso_pu_bacteria 2718218423 2721399832 597
133 iso_pu_bacteria 2721755809 2724038645 597
134 iso_pu_bacteria 2854916844 2854922400 597
135 iso_pu_bacteria 8005275841 8005280837 597
136 iso_pu_bacteria 2599185236 2599721773 598
137 iso_pu_bacteria 2643221557 2643806558 598
138 iso_pu_bacteria 2643221582 2643920460 598
139 iso_pu_bacteria 2643221634 2644195642 598
140 iso_pu_bacteria 2838675328 2838675905 598
141 iso_pu_bacteria 2838714209 2838714787 598
142 iso_pu_bacteria 2838719591 2838721412 598
143 iso_pu_bacteria 2838724970 2838725547 598
144 iso_pu_bacteria 2841846520 2841848377 598
145 iso_pu_bacteria 2842124991 2842125592 598
146 iso_pu_bacteria 2842130223 2842130800 598
147 iso_pu_bacteria 2842152218 2842154030 598
148 iso_pu_bacteria 2842170452 2842171031 598
149 iso_pu_bacteria 2842175837 2842177650 598
150 iso_pu_bacteria 2842187318 2842187896 598
151 iso_pu_bacteria 2842211629 2842212207 598
152 iso_pu_bacteria 2842224351 2842226174 598
153 iso_pu_bacteria 2857516855 2857524311 598
154 iso_pu_bacteria 2919114240 2919114878 598
155 iso_pu_bacteria 2926754445 2926755842 598
156 iso_pu_bacteria 2933006813 2933008675 598
157 3300002773 JGI25152J39213_1000569 JGI25152J39213_100056910 599
158 3300003215 JGI25153J46596_10002659 JGI25153J46596_100026592 599
159 3300003792 Ga0055540_1001510 Ga0055540_10015105 599
160 3300025258 Ga0209129_1000256 Ga0209129_100025625 599
161 3300025297 Ga0209758_1001254 Ga0209758_10012546 599
162 3300031456 Ga0307513_10120151 Ga0307513_101201512 599
163 iso_pu_bacteria 2513237144 2513910850 599
164 iso_pu_bacteria 2558860242 2559298023 599
165 iso_pu_bacteria 2582581304 2585254658 599
166 iso_pu_bacteria 2582581307 2585271419 599
167 iso_pu_bacteria 2582581308 2585279356 599
168 iso_pu_bacteria 2582581866 2585395104 599
169 iso_pu_bacteria 2585427530 2585552917 599
170 iso_pu_bacteria 2585427531 2585559162 599
171 iso_pu_bacteria 2585427594 2585846659 599
172 iso_pu_bacteria 2585427608 2585898544 599
173 iso_pu_bacteria 2585427609 2585903892 599
174 iso_pu_bacteria 2585428125 2587980990 599
175 iso_pu_bacteria 2599185352 2600193689 599
176 iso_pu_bacteria 2615840698 2616551532 599
177 iso_pu_bacteria 2643221568 2643854406 599
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182 iso_pu_bacteria 2643221698 2644545081 599
183 iso_pu_bacteria 2643221712 2644612591 599
184 iso_pu_bacteria 2643221723 2644673243 599
185 iso_pu_bacteria 2718217882 2719184443 599
186 iso_pu_bacteria 2718218009 2719728463 599
187 iso_pu_bacteria 2718218363 2721144151 599
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189 iso_pu_bacteria 2721755514 2722842671 599
190 iso_pu_bacteria 2721755810 2724041488 599
191 iso_pu_bacteria 2728369365 2730160559 599
192 iso_pu_bacteria 2728369397 2730295780 599
193 iso_pu_bacteria 2791355260 2793325286 599
194 iso_pu_bacteria 2791355261 2793330487 599
195 iso_pu_bacteria 2791355264 2793345327 599
196 iso_pu_bacteria 2818991453 2819641264 599
197 iso_pu_bacteria 2818991453 2819644295 599
198 iso_pu_bacteria 2838022645 2838029081 599
199 iso_pu_bacteria 2838661181 2838665194 599
200 iso_pu_bacteria 2842198810 2842205214 599
201 iso_pu_bacteria 2842482326 2842483194 599
202 iso_pu_bacteria 2842509118 2842512577 599
203 iso_pu_bacteria 2844163670 2844165576 599
204 iso_pu_bacteria 2894652903 2894654040 599
205 iso_pu_bacteria 2899845264 2899846145 599
206 iso_pu_bacteria 2919166419 2919170166 599
207 iso_pu_bacteria 2933016740 2933018879 599
208 iso_pu_bacteria 2941499720 2941506475 599
209 iso_pu_bacteria 2977922695 2977925511 599
210 iso_pu_bacteria 2977986579 2977992050 599
211 iso_pu_bacteria 2979089926 2979095300 599
212 iso_pu_bacteria 2979095461 2979097553 599
213 iso_pu_bacteria 3005416602 3005420908 599
214 iso_pu_bacteria 8005289223 8005293355 599
215 iso_pu_bacteria 8005289223 8005294333 599
216 iso_pu_bacteria 8005301065 8005306362 599
217 iso_pu_bacteria 8005314921 8005319357 599
218 iso_pu_bacteria 8005382845 8005383539 599
219 iso_pu_bacteria 8005395548 8005399077 599
220 iso_pu_bacteria 8005688590 8005693942 599
221 iso_pu_bacteria 2537561587 2537873260 600
222 iso_pu_bacteria 2585427633 2585995080 600
223 iso_pu_bacteria 2585427634 2585999626 600
224 iso_pu_bacteria 2599185210 2599606622 600
225 iso_pu_bacteria 8005658619 8005662709 600
226 3300048927 Ga0496124_0000083 Ga0496124_0000083_205758_207605 601
227 iso_pu_bacteria 2513237143 2513906412 601
228 iso_pu_bacteria 2513237351 2514589805 601
229 iso_pu_bacteria 2558860100 2558862453 601
230 iso_pu_bacteria 2643221634 2644191607 601
231 iso_pu_bacteria 2643221659 2644334726 601
232 iso_pu_bacteria 2850079185 2850085912 601
233 iso_pu_bacteria 2889914905 2889916479 601
234 iso_pu_bacteria 2957375807 2957381658 601
235 iso_pu_bacteria 2960693952 2960696003 601
236 iso_pu_bacteria 2967686174 2967687739 601
237 3300013102 Ga0157371_10004400 Ga0157371_100044002 602
238 3300025925 Ga0207650_10004668 Ga0207650_100046684 602
239 3300048919 Ga0496116_0000042 Ga0496116_0000042_131019_132872 602
240 3300048920 Ga0496117_0000411 Ga0496117_0000411_64929_66782 602
241 3300048921 Ga0496118_0001899 Ga0496118_0001899_23923_25776 602
242 3300048921 Ga0496118_0002239 Ga0496118_0002239_24624_26477 602
243 3300048922 Ga0496119_0000228 Ga0496119_0000228_47339_49192 602
244 3300048923 Ga0496120_0000556 Ga0496120_0000556_30258_32111 602
245 3300048925 Ga0496122_0000831 Ga0496122_0000831_26459_28312 602
246 3300048926 Ga0496123_0000637 Ga0496123_0000637_26461_28314 602
247 3300048927 Ga0496124_0000676 Ga0496124_0000676_26460_28313 602
248 3300048928 Ga0496125_0000680 Ga0496125_0000680_30258_32111 602
249 3300048929 Ga0496126_0000559 Ga0496126_0000559_22894_24747 602
250 3300048929 Ga0496126_0000815 Ga0496126_0000815_24781_26634 602
251 3300053177 Ga0500636_0001925 Ga0500636_0001925_2551_4401 602
252 iso_pu_bacteria 2509276021 2509392353 602
253 iso_pu_bacteria 2509276033 2509446703 602
254 iso_pu_bacteria 2510065019 2510133639 602
255 iso_pu_bacteria 2510461076 2510895053 602
256 iso_pu_bacteria 2510917030 2511196024 602
257 iso_pu_bacteria 2513237085 2513577629 602
258 iso_pu_bacteria 2513237093 2513629732 602
259 iso_pu_bacteria 2513237103 2513708378 602
260 iso_pu_bacteria 2513237162 2514022492 602
261 iso_pu_bacteria 2515154113 2515634190 602
262 iso_pu_bacteria 2515154114 2515640136 602
263 iso_pu_bacteria 2515154116 2515655668 602
264 iso_pu_bacteria 2515154134 2515740116 602
265 iso_pu_bacteria 2517287029 2517407094 602
266 iso_pu_bacteria 2582581294 2585201865 602
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269 iso_pu_bacteria 2585427590 2585823366 602
270 iso_pu_bacteria 2585427593 2585835822 602
271 iso_pu_bacteria 2615840624 2616292212 602
272 iso_pu_bacteria 2718217997 2719665869 602
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279 iso_pu_bacteria 2738541317 2738948816 602
280 iso_pu_bacteria 2738541333 2739032529 602
281 iso_pu_bacteria 2765235942 2766066788 602
282 iso_pu_bacteria 2775506902 2776267204 602
283 iso_pu_bacteria 2775506904 2776279391 602
284 iso_pu_bacteria 2791355256 2793294950 602
285 iso_pu_bacteria 2791355262 2793337277 602
286 iso_pu_bacteria 2791355265 2793357046 602
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291 iso_pu_bacteria 2802429633 2806043506 602
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299 iso_pu_bacteria 2838061910 2838066183 602
300 iso_pu_bacteria 2838068647 2838074473 602
301 iso_pu_bacteria 2838668709 2838673590 602
302 iso_pu_bacteria 2838680041 2838681903 602
303 iso_pu_bacteria 2838686498 2838687367 602
304 iso_pu_bacteria 2838694306 2838696474 602
305 iso_pu_bacteria 2838701080 2838705986 602
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309 iso_pu_bacteria 2841851746 2841858620 602
310 iso_pu_bacteria 2841864319 2841870678 602
311 iso_pu_bacteria 2842077413 2842078461 602
312 iso_pu_bacteria 2842110456 2842114054 602
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315 iso_pu_bacteria 2842156927 2842157069 602
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320 iso_pu_bacteria 2842217011 2842217594 602
321 iso_pu_bacteria 2842229732 2842230601 602
322 iso_pu_bacteria 2842237096 2842239698 602
323 iso_pu_bacteria 2842243621 2842249879 602
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325 iso_pu_bacteria 2842257432 2842263886 602
326 iso_pu_bacteria 2842271015 2842271094 602
327 iso_pu_bacteria 2842278818 2842279224 602
328 iso_pu_bacteria 2842285085 2842285871 602
329 iso_pu_bacteria 2842291075 2842292122 602
330 iso_pu_bacteria 2842304105 2842304724 602
331 iso_pu_bacteria 2842311132 2842317139 602
332 iso_pu_bacteria 2842317721 2842324404 602
333 iso_pu_bacteria 2842341865 2842345402 602
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335 iso_pu_bacteria 2842370503 2842372469 602
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340 iso_pu_bacteria 2842409023 2842409397 602
341 iso_pu_bacteria 2842415677 2842416050 602
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345 iso_pu_bacteria 2844454524 2844458736 602
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347 iso_pu_bacteria 2857516855 2857520124 602
348 iso_pu_bacteria 2913308742 2913313772 602
349 iso_pu_bacteria 2923556063 2923561389 602
350 iso_pu_bacteria 2933570622 2933571997 602
351 iso_pu_bacteria 2933586486 2933590150 602
352 iso_pu_bacteria 2933599457 2933604929 602
353 iso_pu_bacteria 2935894831 2935897669 602
354 iso_pu_bacteria 2935901341 2935905337 602
355 iso_pu_bacteria 2936367885 2936372379 602
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358 iso_pu_bacteria 639633055 639648870 602
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360 iso_pu_bacteria 8005307578 8005312513 602
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368 iso_pu_bacteria 8005619151 8005621980 602
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370 iso_pu_bacteria 8005682033 8005688111 602
371 iso_pu_bacteria 8005695170 8005696565 602
372 iso_pu_bacteria 8018127388 8018130187 602
373 iso_pu_bacteria 8018176218 8018178797 602
374 iso_pu_bacteria 8023680758 8023685035 602
375 iso_pu_bacteria 8024479707 8024483207 602
376 iso_pu_bacteria 8024501048 8024501369 602
377 iso_pu_bacteria 8054460903 8054463467 602
378 iso_pu_bacteria 8056375014 8056376900 602
379 iso_pu_bacteria 8056382006 8056386445 602
380 iso_pu_bacteria 8057874678 8057874700 602
381 3300003354 JGI25160J50197_1001015 JGI25160J50197_100101512 603
382 3300003374 JGI25161J50226_1000619 JGI25161J50226_100061912 603
383 3300003771 Ga0055526_1009535 Ga0055526_10095352 603
384 3300003790 Ga0055528_1000100 Ga0055528_100010062 603
385 3300004625 Ga0055543_1000861 Ga0055543_10008613 603
386 3300005262 Ga0065165_1002632 Ga0065165_100263212 603
387 3300006195 Ga0075366_10009220 Ga0075366_100092201 603
388 3300009148 Ga0105243_10098722 Ga0105243_100987222 603
389 3300013104 Ga0157370_10000208 Ga0157370_1000020850 603
390 3300025273 Ga0209673_1000067 Ga0209673_1000067131 603
391 3300025284 Ga0209130_1000459 Ga0209130_10004592 603
392 3300025294 Ga0209025_1002177 Ga0209025_10021776 603
393 3300025295 Ga0209564_1000092 Ga0209564_1000092131 603
394 3300025299 Ga0209256_1000170 Ga0209256_100017071 603
395 3300025302 Ga0207426_1000651 Ga0207426_10006512 603
396 3300031731 Ga0307405_10006913 Ga0307405_100069133 603
397 3300031911 Ga0307412_10067848 Ga0307412_100678482 603
398 3300041413 Ga0439465_0011310 Ga0439465_0011310_914_2767 603
399 3300047443 Ga0495687_028962 Ga0495687_028962_253_2106 603
400 3300048909 Ga0496106_0000038 Ga0496106_0000038_25814_27673 603
401 3300048919 Ga0496116_0014885 Ga0496116_0014885_1804_3657 603
402 3300048919 Ga0496116_0017368 Ga0496116_0017368_2494_4347 603
403 3300048921 Ga0496118_0016018 Ga0496118_0016018_2564_4417 603
404 3300048922 Ga0496119_0004105 Ga0496119_0004105_582_2435 603
405 3300048924 Ga0496121_0018098 Ga0496121_0018098_2400_4253 603
406 3300048925 Ga0496122_0003171 Ga0496122_0003171_18248_20101 603
407 3300048925 Ga0496122_0045577 Ga0496122_0045577_1071_2924 603
408 3300048926 Ga0496123_0010160 Ga0496123_0010160_3793_5646 603
409 3300048926 Ga0496123_0022997 Ga0496123_0022997_356_2209 603
410 3300048927 Ga0496124_0009560 Ga0496124_0009560_2736_4589 603
411 3300048927 Ga0496124_0061999 Ga0496124_0061999_1188_3041 603
412 3300048928 Ga0496125_0023024 Ga0496125_0023024_3511_5364 603
413 3300050492 nmdc:mga0yw44_70_c1 nmdc:mga0yw44_70_c1_17058_18911 603
414 3300050493 nmdc:mga0k408_3714_c1 nmdc:mga0k408_3714_c1_161_2014 603
415 3300053137 Ga0500561_0000113 Ga0500561_0000113_4079_5932 603
416 3300053160 Ga0500633_0006569 Ga0500633_0006569_59_1918 603
417 3300053177 Ga0500636_0000005 Ga0500636_0000005_117885_119738 603
418 iso_pu_bacteria 8005484373 8005487781 603
419 iso_pu_bacteria 8005645114 8005650299 603
420 3300041494 Ga0451837_0483360 Ga0451837_0483360_271_2151 605
421 3300041498 Ga0451841_0067735 Ga0451841_0067735_1187_3079 605
422 3300041505 Ga0451849_0831508 Ga0451849_0831508_1993_3885 605
423 3300041509 Ga0451843_0361196 Ga0451843_0361196_14_1906 605
424 3300046492 Ga0495585_0009758 Ga0495585_0009758_1890_3749 605
425 3300046616 Ga0495668_0031102 Ga0495668_0031102_669_2528 605
426 3300002737 JGI25162J39368_1001701 JGI25162J39368_100170110 606
427 3300003214 JGI25165J46597_1000920 JGI25165J46597_100092018 606
428 3300009765 Ga0123341_1000070 Ga0123341_100007038 606
429 3300009766 Ga0123342_1020422 Ga0123342_10204225 606
430 3300025233 Ga0209437_100153 Ga0209437_10015395 606
431 3300025245 Ga0207425_1001406 Ga0207425_10014064 606
432 3300025258 Ga0209129_1000244 Ga0209129_100024466 606
433 3300025261 Ga0209233_1000175 Ga0209233_100017584 606
434 3300025273 Ga0209673_1000522 Ga0209673_100052236 606
435 3300025297 Ga0209758_1001154 Ga0209758_100115417 606
436 3300025298 Ga0209050_1007240 Ga0209050_10072407 606
437 3300025303 Ga0209051_1000418 Ga0209051_100041835 606
438 3300025304 Ga0209257_1002622 Ga0209257_100262220 606
439 3300048920 Ga0496117_0037888 Ga0496117_0037888_1514_3382 606
440 3300048921 Ga0496118_0011386 Ga0496118_0011386_6514_8382 606
441 3300048924 Ga0496121_0057155 Ga0496121_0057155_1343_3211 606
442 3300048925 Ga0496122_0010164 Ga0496122_0010164_4501_6369 606
443 3300048927 Ga0496124_0068244 Ga0496124_0068244_190_2058 606
444 3300048928 Ga0496125_0041816 Ga0496125_0041816_917_2785 606
445 3300053156 Ga0500622_0000367 Ga0500622_0000367_22275_24143 606
446 iso_pu_bacteria 2585427529 2585545160 606

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

41

315

0.92

PF00005

ABC_tran

ABC transporter

379

533

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nh9-assembly1.cif.gz_A nucleotide binding domain of human abcb6 (atp bound structure) 0.9318 337 594
4q7l-assembly3.cif.gz_C structure of nbd288 of tm287/288 0.9266 351 594
3nhb-assembly1.cif.gz_A nucleotide binding domain of human abcb6 (adp bound structure) 0.9253 337 594
4q7l-assembly3.cif.gz_C structure of nbd288 of tm287/288 0.9119 351 594
6bzr-assembly2.cif.gz_A human abcc6 nbd2 in adp-bound state 0.9105 351 598
ID Description Score Start End Superfamily
af_Q61102_466_725_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9487 350 596 3.40.50.300
af_Q2FVJ2_326_574_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9415 344 596 3.40.50.300
af_P9WQJ9_605_853_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9384 349 596 3.40.50.300
af_Q54NL1_1088_1337_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9335 349 590 3.40.50.300
af_G5EE72_1101_1348_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9333 350 589 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2A8D2P9-F1-model_v4 ABC transporter domain-containing protein 0.9534 350 596 GO:0005524
GO:0016887
GO:0034040
AF-A0A847KX24-F1-model_v4 deleted 0.9508 379 596
AF-A0A3D3GPI7-F1-model_v4 ABC transporter domain-containing protein 0.9506 379 601 GO:0005524
GO:0016887
GO:0034040
AF-A0A7S1X004-F1-model_v4 ABC transporter domain-containing protein 0.9457 420 579 GO:0005524
GO:0005737
GO:0016020
GO:0016887
GO:0042626
AF-A0A4P6PA45-F1-model_v4 ATP-binding cassette domain-containing protein 0.944 337 595 GO:0005524
GO:0005886
GO:0016887
GO:0034040

Feature Viewer

pLDDT pTM Quality
76.94 0.56 Medium
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Predicted Structure (AlphaFold2)

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