F445010

General Info

Members Datasets Scaffolds Average Seq Length
443 351 192 257

Family's Representative Sequence

Representative Sequence 3300003323|rootH1_10212331|rootH1_102123313
Length 306
Sequence MSEWCGGDLVLSADLDREGITGGDITLRPDEGIIIKVGARPPGECRRSEMTKVALVTGAGSGIGKATAVLLASRGYKVGVLGHTEAEIAVTTREISARGGEAILLRADISNEQEMRKAIDGLVAQAGRLDAVVANAGINGAWAPIDDLTLEEWNRTIAINLTGTFLTIHTTVPHLKRAGGGAIVVVSSINGTRTFTTPGATAYTVTKAGQVAMVQQLALELARHHIRINAVCPGEIETNIESNTDLRKEEETAIPVVWPEGQVPITGGRPGRSRDVASVIAFLASDDARHMTGSPVWVDGGQGLLR

Samples

Sample ID Description Type Environment
1 2509276019 Ensifer aridi TW10 Isolate Nodule
2 2510065057 Sinorhizobium meliloti WSM1022 Isolate Nodule
3 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
4 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
5 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
6 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
7 2513237091 Sinorhizobium meliloti RRI128 Isolate Nodule
8 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
9 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
10 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
11 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
12 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
13 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
14 2516143018 Ensifer sp. BR816 Isolate Nodule
15 2516653046 Sinorhizobium meliloti BO21CC Isolate Nodule
16 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
17 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
18 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
19 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
20 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
21 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
22 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
23 2551306089 Sinorhizobium meliloti 1A42 Isolate Nodule
24 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
25 2551306091 Sinorhizobium meliloti C0431A Isolate Nodule
26 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
27 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
28 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
29 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
30 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
31 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
32 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
33 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
34 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
35 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
36 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
37 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
38 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
39 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
40 2643221582 Rhizobium sp. Root651 Isolate Unclassified
41 2643221591 Devosia sp. Root685 Isolate Unclassified
42 2643221599 Rhizobium sp. Root708 Isolate Unclassified
43 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
44 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
45 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
46 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
47 2643221659 Ensifer sp. Root127 Isolate Unclassified
48 2643221688 Rhizobium sp. Root482 Isolate Unclassified
49 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
50 2643221693 Rhizobium sp. Root491 Isolate Unclassified
51 2643221698 Ensifer sp. Root142 Isolate Unclassified
52 2643221718 Rhizobium sp. Root268 Isolate Unclassified
53 2718217882 Rhizobium sp. N741 Isolate Nodule
54 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
55 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
56 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
57 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
58 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
59 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
60 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
61 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
62 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
63 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
64 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
65 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
66 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
67 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
68 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
69 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
70 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
71 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
72 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
73 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
74 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
75 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
76 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
77 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
78 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
79 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
80 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
81 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
82 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
83 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
84 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
85 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
86 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
87 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
88 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
89 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
90 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
91 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
92 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
93 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
94 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
95 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
96 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
97 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
98 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
99 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
100 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
101 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
102 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
103 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
104 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
105 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
106 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
107 2916048683 Sinorhizobium meliloti USDA1796 Isolate Nodule
108 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
109 2916068649 Sinorhizobium meliloti USDA1220 Isolate Nodule
110 2916076590 Sinorhizobium meliloti USDA1661 Isolate Nodule
111 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
112 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
113 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
114 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
115 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
116 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
117 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
118 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
119 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
120 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
121 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
122 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
123 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
124 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
125 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
126 2924193448 Sinorhizobium meliloti USDA1158 Isolate Nodule
127 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
128 2924207177 Sinorhizobium meliloti USDA1589 Isolate Nodule
129 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
130 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
131 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
132 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
133 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
134 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
135 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
136 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
137 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
138 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
139 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
140 2937009748 Sinorhizobium meliloti USDA1162 Isolate Nodule
141 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
142 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
143 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
144 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
145 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
146 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
147 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
148 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
149 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
150 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
151 2937119839 Sinorhizobium meliloti USDA1790 Isolate Nodule
152 2937126314 Sinorhizobium meliloti USDA1612 Isolate Nodule
153 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
154 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
155 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
156 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
157 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
158 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
159 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
160 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
161 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
162 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
163 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
164 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
165 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
166 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
167 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
168 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
169 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
170 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
171 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
172 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
173 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
174 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
175 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
176 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
177 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
178 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
179 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
180 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
181 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
182 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
183 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
184 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
185 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
186 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
187 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
188 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
189 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
190 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
191 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
192 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
193 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
194 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
195 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
196 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
197 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
198 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
199 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
200 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
201 2967762386 Sinorhizobium meliloti USDA1397 Isolate Nodule
202 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
203 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
204 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
205 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
206 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
207 2970082768 Sinorhizobium meliloti USDA1803 Isolate Nodule
208 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
209 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
210 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
211 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
212 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
213 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
214 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
215 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
216 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
217 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
218 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
219 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
220 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
221 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
222 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
223 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
224 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
225 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
226 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
227 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
228 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
229 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
230 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
231 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
232 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
233 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
234 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
235 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
236 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
237 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
238 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
239 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
240 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
241 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
242 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
243 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
244 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
245 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
246 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
247 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
248 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
249 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
250 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
251 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
252 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
253 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
254 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
255 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
256 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
257 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
258 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
259 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
260 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
261 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
262 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
263 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
264 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
265 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
266 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
267 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
268 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
269 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
270 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
271 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
272 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
273 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
274 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
275 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
276 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
277 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
278 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
279 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
280 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
281 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
282 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
283 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
284 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
285 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
286 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
287 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
288 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
289 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
290 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
291 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
292 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
293 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
294 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
295 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
296 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
297 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
298 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
299 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
300 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
301 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
302 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
303 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
304 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
305 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
306 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
307 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
308 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
309 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
310 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
311 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
312 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
313 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
314 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
315 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
316 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
317 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
318 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
319 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
320 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
321 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
322 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
323 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
324 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
325 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
326 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
327 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
328 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
329 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
330 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
331 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
332 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
333 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
334 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
335 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
336 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
337 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
338 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
339 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
340 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
341 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
342 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
343 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
344 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
345 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
346 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule
347 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
348 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
349 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
350 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
351 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 43.57
Metatranscriptomes 0
Isolates 56.43

Biome Distribution

Category Percentage (%)
Aerial Root 0.9
Bulb 0
Endosphere 14.45
Nodule 44.7
Rhizoplane 2.93
Rhizosphere 14.67
Stem 0
Stem Tuber 0
Unclassified 22.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000471 3300002773 Bacteria 23474
2 JGI25150J39212_1000343 3300002774 Bacteria 22950
3 JGI25151J46595_10000893 3300003187 Bacteria 23474
4 rootH1_10060759 3300003316 Bacteria 6963
5 rootH1_10062614 3300003316 Bacteria 3096
6 rootH2_10138839 3300003320 Bacteria 3268
7 rootH2_10191709 3300003320 Bacteria 1610
8 rootL2_10046745 3300003322 Bacteria 17336
9 rootL2_10151214 3300003322 Bacteria 7462
10 rootH1_10044739 3300003323 Bacteria 10599
11 rootH1_10212331 3300003323 Unclassified 3341
12 Ga0055524_1011505 3300003775 Bacteria 3458
13 Ga0055528_1000210 3300003790 Bacteria 49470
14 Ga0058692_1003848 3300003856 Bacteria 4557
15 Ga0065165_1003320 3300005262 Bacteria 11510
16 Ga0065165_1005358 3300005262 Bacteria 7274
17 Ga0070670_100000464 3300005331 Bacteria 32824
18 Ga0068853_100414808 3300005539 Bacteria 1262
19 Ga0070665_100050930 3300005548 Bacteria 4155
20 Ga0070665_100067050 3300005548 Bacteria 3600
21 Ga0075368_10078392 3300006042 Bacteria 1342
22 Ga0075363_100032201 3300006048 Bacteria 2722
23 Ga0075364_10052305 3300006051 Bacteria 2669
24 Ga0075364_10099760 3300006051 Bacteria 1933
25 Ga0075364_10132321 3300006051 Bacteria 1675
26 Ga0075364_10133936 3300006051 Bacteria 1664
27 Ga0075362_10007393 3300006177 Bacteria 4159
28 Ga0075362_10065472 3300006177 Bacteria 1650
29 Ga0075362_10124770 3300006177 Bacteria 1221
30 Ga0075367_10007206 3300006178 Bacteria 5677
31 Ga0075367_10107928 3300006178 Bacteria 1706
32 Ga0075366_10002007 3300006195 Bacteria 10319
33 Ga0075366_10081552 3300006195 Unclassified 1932
34 Ga0075366_10191123 3300006195 Bacteria 1244
35 Ga0075370_10040504 3300006353 Bacteria 2628
36 Ga0079104_1032221 3300006946 Bacteria 1294
37 Ga0079104_1037927 3300006946 Bacteria 1145
38 Ga0099826_10000054 3300006948 Bacteria 71175
39 Ga0099826_10046262 3300006948 Bacteria 2967
40 Ga0105240_10003934 3300009093 Bacteria 22950
41 Ga0105243_10009447 3300009148 Bacteria 7430
42 Ga0105237_10009270 3300009545 Bacteria 10549
43 Ga0105239_10012978 3300010375 Bacteria 9268
44 Ga0105246_10068708 3300011119 Bacteria 2486
45 Ga0157373_10051720 3300013100 Bacteria 2925
46 Ga0157371_10000002 3300013102 Bacteria 665040
47 Ga0157370_10000286 3300013104 Bacteria 64173
48 Ga0157370_10047376 3300013104 Bacteria 4121
49 Ga0157370_10197892 3300013104 Bacteria 1865
50 Ga0182005_1032631 3300015265 Bacteria 1417
51 Ga0214542_1000081 3300021321 Bacteria 121242
52 Ga0214543_1000005 3300021327 Bacteria 454523
53 Ga0214543_1000042 3300021327 Bacteria 164433
54 Ga0207425_1000500 3300025245 Bacteria 24431
55 Ga0207425_1028528 3300025245 Bacteria 1131
56 Ga0209129_1000203 3300025258 Bacteria 70739
57 Ga0209129_1000602 3300025258 Bacteria 24431
58 Ga0209673_1000416 3300025273 Bacteria 74754
59 Ga0209673_1000594 3300025273 Bacteria 56419
60 Ga0209673_1028295 3300025273 Bacteria 1807
61 Ga0209130_1009092 3300025284 Bacteria 2864
62 Ga0209130_1017529 3300025284 Bacteria 1703
63 Ga0209025_1001447 3300025294 Bacteria 31156
64 Ga0209025_1001893 3300025294 Bacteria 24431
65 Ga0209025_1003844 3300025294 Bacteria 13648
66 Ga0209025_1004702 3300025294 Bacteria 11654
67 Ga0209025_1077741 3300025294 Bacteria 1142
68 Ga0209564_1000306 3300025295 Bacteria 96600
69 Ga0209564_1008709 3300025295 Bacteria 4954
70 Ga0209758_1001723 3300025297 Bacteria 24431
71 Ga0209758_1040046 3300025297 Bacteria 1773
72 Ga0209758_1051091 3300025297 Bacteria 1443
73 Ga0209256_1000246 3300025299 Bacteria 96612
74 Ga0209256_1008188 3300025299 Bacteria 4910
75 Ga0209051_1018175 3300025303 Bacteria 3119
76 Ga0207695_10000381 3300025913 Bacteria 100821
77 Ga0207671_10000252 3300025914 Bacteria 80522
78 Ga0207650_10118947 3300025925 Bacteria 2054
79 Ga0207709_10031248 3300025935 Bacteria 3108
80 Ga0209371_1000012 3300027312 Bacteria 748304
81 Ga0209371_1000282 3300027312 Bacteria 58487
82 Ga0209371_1002204 3300027312 Bacteria 11321
83 Ga0209282_1000140 3300027666 Bacteria 42807
84 Ga0209282_1037250 3300027666 Bacteria 2926
85 Ga0209813_10110942 3300027866 Bacteria 945
86 Ga0268266_10036738 3300028379 Bacteria 4172
87 Ga0268256_1000013 3300030500 Bacteria 752103
88 Ga0268256_1000529 3300030500 Bacteria 31787
89 Ga0268256_1004573 3300030500 Bacteria 5689
90 Ga0316181_1002114 3300030744 Bacteria 4281
91 Ga0316182_1345263 3300030745 Bacteria 2047
92 Ga0307405_10000774 3300031731 Bacteria 12519
93 Ga0307412_10015805 3300031911 Bacteria 4480
94 Ga0307409_100709841 3300031995 Bacteria 1006
95 Ga0395905_0000398 3300037471 Bacteria 61654
96 Ga0439465_0001348 3300041413 Bacteria 7897
97 Ga0439465_0013316 3300041413 Bacteria 2567
98 Ga0439465_0021758 3300041413 Bacteria 2013
99 Ga0451789_0542633 3300041443 Bacteria 1746
100 Ga0451833_0722895 3300041491 Bacteria 932
101 Ga0439432_020378 3300042006 Bacteria 2204
102 Ga0450918_013125 3300042531 Bacteria 1441
103 Ga0466967_0449661 3300045976 Bacteria 1259
104 Ga0495617_116776 3300046452 Bacteria 861
105 Ga0495638_0000416 3300046460 Bacteria 51791
106 Ga0495638_0015430 3300046460 Bacteria 5129
107 Ga0495606_0015452 3300046507 Bacteria 5879
108 Ga0495632_0012394 3300046519 Plasmid 4920
109 Ga0495668_0020812 3300046616 Bacteria 3768
110 Ga0495625_0022943 3300046660 Bacteria 4775
111 Ga0496100_0014099 3300048903 Bacteria 4632
112 Ga0496103_0055110 3300048906 Bacteria 2465
113 Ga0496104_0055811 3300048907 Bacteria 3735
114 Ga0496106_0001817 3300048909 Bacteria 15954
115 Ga0496107_0058500 3300048910 Bacteria 2787
116 Ga0496110_0049044 3300048913 Bacteria 3703
117 Ga0496111_0131742 3300048914 Bacteria 1850
118 Ga0496116_0000798 3300048919 Bacteria 39923
119 Ga0496116_0073600 3300048919 Bacteria 2153
120 Ga0496116_0093470 3300048919 Bacteria 1820
121 Ga0496117_0000016 3300048920 Bacteria 523642
122 Ga0496117_0003226 3300048920 Bacteria 19253
123 Ga0496117_0029643 3300048920 Bacteria 4215
124 Ga0496117_0062842 3300048920 Bacteria 2542
125 Ga0496118_0000535 3300048921 Bacteria 62444
126 Ga0496118_0023796 3300048921 Bacteria 5308
127 Ga0496118_0027861 3300048921 Bacteria 4772
128 Ga0496118_0043894 3300048921 Bacteria 3507
129 Ga0496119_0009364 3300048922 Bacteria 8421
130 Ga0496119_0019517 3300048922 Bacteria 4989
131 Ga0496119_0038034 3300048922 Bacteria 3115
132 Ga0496120_0000056 3300048923 Bacteria 180367
133 Ga0496120_0001532 3300048923 Bacteria 27161
134 Ga0496120_0114481 3300048923 Bacteria 1404
135 Ga0496121_0000337 3300048924 Bacteria 97711
136 Ga0496121_0001782 3300048924 Bacteria 34888
137 Ga0496122_0000002 3300048925 Bacteria 905834
138 Ga0496122_0001625 3300048925 Bacteria 35065
139 Ga0496122_0045666 3300048925 Bacteria 3401
140 Ga0496122_0114746 3300048925 Bacteria 1756
141 Ga0496123_0000002 3300048926 Bacteria 1811682
142 Ga0496123_0006902 3300048926 Bacteria 10862
143 Ga0496123_0009415 3300048926 Bacteria 8800
144 Ga0496123_0013695 3300048926 Bacteria 6783
145 Ga0496123_0060012 3300048926 Bacteria 2454
146 Ga0496123_0126420 3300048926 Bacteria 1426
147 Ga0496124_0002362 3300048927 Bacteria 24894
148 Ga0496124_0006268 3300048927 Bacteria 13017
149 Ga0496124_0031298 3300048927 Bacteria 4711
150 Ga0496124_0079937 3300048927 Bacteria 2691
151 Ga0496124_0108992 3300048927 Bacteria 2232
152 Ga0496124_0117727 3300048927 Bacteria 2128
153 Ga0496124_0193570 3300048927 Bacteria 1553
154 Ga0496125_0000617 3300048928 Bacteria 60041
155 Ga0496125_0001969 3300048928 Bacteria 27945
156 Ga0496125_0004338 3300048928 Bacteria 16459
157 Ga0496125_0024719 3300048928 Bacteria 5516
158 Ga0496125_0057247 3300048928 Bacteria 3159
159 Ga0496125_0103701 3300048928 Bacteria 2086
160 Ga0496125_0183362 3300048928 Bacteria 1391
161 Ga0496125_0236940 3300048928 Bacteria 1162
162 Ga0496126_0000670 3300048929 Bacteria 63371
163 Ga0496126_0000808 3300048929 Bacteria 56013
164 Ga0496126_0008806 3300048929 Bacteria 10825
165 Ga0496126_0022862 3300048929 Bacteria 6071
166 Ga0496126_0139458 3300048929 Bacteria 2088
167 Ga0496126_0176011 3300048929 Bacteria 1820
168 Ga0496126_0286534 3300048929 Bacteria 1363
169 Ga0501034_0106661 3300049571 Bacteria 2794
170 Ga0501034_0119403 3300049571 Bacteria 2623
171 Ga0501036_0226165 3300049572 Bacteria 1570
172 Ga0501037_0034983 3300049573 Bacteria 3706
173 Ga0501080_0135788 3300049742 Bacteria 2276
174 nmdc:mga03683_3348_c1 3300050489 Bacteria 5154
175 nmdc:mga03683_5271_c1 3300050489 Bacteria 4356
176 nmdc:mga03683_75370_c1 3300050489 Bacteria 1449
177 nmdc:mga03n38_23709_c1 3300050490 Bacteria 2501
178 nmdc:mga03n38_46926_c1 3300050490 Bacteria 1909
179 nmdc:mga00v17_118238_c1 3300050491 Bacteria 1686
180 nmdc:mga00v17_3_c1 3300050491 Bacteria 242367
181 nmdc:mga00v17_51585_c1 3300050491 Bacteria 2501
182 nmdc:mga00v17_79301_c1 3300050491 Bacteria 2047
183 nmdc:mga0yw44_3130_c1 3300050492 Bacteria 7260
184 nmdc:mga0k408_184599_c1 3300050493 Bacteria 1244
185 nmdc:mga0k408_3057_c2 3300050493 Bacteria 8582
186 nmdc:mga04h51_57122_c1 3300050495 Bacteria 1327
187 nmdc:mga0sz30_486_c1 3300050516 Bacteria 14844
188 Ga0500644_0088071 3300053088 Bacteria 1156
189 Ga0500644_0192980 3300053088 Bacteria 839
190 Ga0500560_009606 3300053107 Bacteria 2384
191 Ga0500561_0000032 3300053137 Bacteria 28548
192 Ga0500636_0000011 3300053177 Bacteria 140769

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006048 Ga0075363_100032201 Ga0075363_1000322012 219
2 3300050490 nmdc:mga03n38_46926_c1 nmdc:mga03n38_46926_c1_803_1591 219
3 3300006051 Ga0075364_10099760 Ga0075364_100997602 221
4 3300046507 Ga0495606_0015452 Ga0495606_0015452_3939_4754 243
5 3300006177 Ga0075362_10007393 Ga0075362_100073933 245
6 3300006946 Ga0079104_1032221 Ga0079104_10322211 245
7 3300006946 Ga0079104_1037927 Ga0079104_10379272 245
8 3300050489 nmdc:mga03683_3348_c1 nmdc:mga03683_3348_c1_1603_2391 245
9 3300031911 Ga0307412_10015805 Ga0307412_100158058 246
10 3300048925 Ga0496122_0045666 Ga0496122_0045666_931_1707 246
11 3300021327 Ga0214543_1000005 Ga0214543_1000005229 247
12 3300013104 Ga0157370_10197892 Ga0157370_101978923 248
13 3300031731 Ga0307405_10000774 Ga0307405_1000077417 248
14 3300003316 rootH1_10060759 rootH1_100607594 249
15 3300003320 rootH2_10138839 rootH2_101388391 249
16 3300003322 rootL2_10151214 rootL2_101512143 249
17 3300003323 rootH1_10044739 rootH1_1004473912 249
18 3300003775 Ga0055524_1011505 Ga0055524_10115051 249
19 3300003790 Ga0055528_1000210 Ga0055528_100021065 249
20 3300025245 Ga0207425_1028528 Ga0207425_10285281 249
21 3300025273 Ga0209673_1000416 Ga0209673_100041686 249
22 3300025294 Ga0209025_1004702 Ga0209025_10047029 249
23 3300025295 Ga0209564_1008709 Ga0209564_10087091 249
24 3300025299 Ga0209256_1008188 Ga0209256_10081882 249
25 3300025303 Ga0209051_1018175 Ga0209051_10181751 249
26 3300030745 Ga0316182_1345263 Ga0316182_13452632 249
27 3300049572 Ga0501036_0226165 Ga0501036_0226165_458_1321 250
28 3300049573 Ga0501037_0034983 Ga0501037_0034983_537_1400 250
29 3300048909 Ga0496106_0001817 Ga0496106_0001817_4527_5282 251
30 3300049742 Ga0501080_0135788 Ga0501080_0135788_1039_1902 251
31 3300053088 Ga0500644_0088071 Ga0500644_0088071_108_863 251
32 3300025297 Ga0209758_1051091 Ga0209758_10510912 252
33 3300046616 Ga0495668_0020812 Ga0495668_0020812_344_1126 252
34 3300046660 Ga0495625_0022943 Ga0495625_0022943_3076_3858 252
35 iso_pu_bacteria 3005452660 3005457227 252
36 iso_pu_bacteria 2585427594 2585847433 253
37 iso_pu_bacteria 2599185156 2599334163 253
38 iso_pu_bacteria 2842922631 2842925555 253
39 3300046460 Ga0495638_0015430 Ga0495638_0015430_258_1022 254
40 3300053088 Ga0500644_0192980 Ga0500644_0192980_50_814 254
41 iso_pu_bacteria 2513237159 2513999755 254
42 iso_pu_bacteria 2534681796 2535518407 254
43 iso_pu_bacteria 2582581308 2585277631 254
44 iso_pu_bacteria 2599185236 2599723716 254
45 iso_pu_bacteria 2643221599 2644008233 254
46 iso_pu_bacteria 2643221636 2644204548 254
47 iso_pu_bacteria 2643221637 2644208484 254
48 iso_pu_bacteria 2643221643 2644238302 254
49 iso_pu_bacteria 2643221689 2644498150 254
50 iso_pu_bacteria 2643221718 2644651736 254
51 iso_pu_bacteria 2838029111 2838032894 254
52 iso_pu_bacteria 2842475841 2842479627 254
53 iso_pu_bacteria 2842502639 2842506708 254
54 iso_pu_bacteria 2842521101 2842525649 254
55 iso_pu_bacteria 8005645114 8005648656 254
56 iso_pu_bacteria 8054460903 8054464423 254
57 3300041413 Ga0439465_0013316 Ga0439465_0013316_182_1006 255
58 3300042531 Ga0450918_013125 Ga0450918_013125_393_1217 255
59 iso_pu_bacteria 2513237146 2513927053 255
60 iso_pu_bacteria 2523231067 2523468477 255
61 iso_pu_bacteria 2554235003 2554245569 255
62 iso_pu_bacteria 2558860242 2559296601 255
63 iso_pu_bacteria 2599185170 2599420454 255
64 iso_pu_bacteria 2600255279 2601610513 255
65 iso_pu_bacteria 2600255308 2601747157 255
66 iso_pu_bacteria 2615840624 2616295673 255
67 iso_pu_bacteria 2643221659 2644336711 255
68 iso_pu_bacteria 2643221693 2644520730 255
69 iso_pu_bacteria 2643221698 2644541051 255
70 iso_pu_bacteria 2718217882 2719182710 255
71 iso_pu_bacteria 2738543031 2739348281 255
72 iso_pu_bacteria 2775507049 2776911505 255
73 iso_pu_bacteria 2808606387 2808987054 255
74 iso_pu_bacteria 2838022645 2838024190 255
75 iso_pu_bacteria 2838035591 2838040875 255
76 iso_pu_bacteria 2838661181 2838664735 255
77 iso_pu_bacteria 2838675328 2838677865 255
78 iso_pu_bacteria 2838714209 2838717230 255
79 iso_pu_bacteria 2838719591 2838722161 255
80 iso_pu_bacteria 2838724970 2838727979 255
81 iso_pu_bacteria 2841846520 2841849640 255
82 iso_pu_bacteria 2841859092 2841861324 255
83 iso_pu_bacteria 2842124991 2842127612 255
84 iso_pu_bacteria 2842130223 2842132758 255
85 iso_pu_bacteria 2842152218 2842154752 255
86 iso_pu_bacteria 2842170452 2842173250 255
87 iso_pu_bacteria 2842175837 2842178372 255
88 iso_pu_bacteria 2842187318 2842190337 255
89 iso_pu_bacteria 2842198810 2842199731 255
90 iso_pu_bacteria 2842211629 2842214651 255
91 iso_pu_bacteria 2842224351 2842227371 255
92 iso_pu_bacteria 2899845264 2899849908 255
93 iso_pu_bacteria 2919114240 2919117488 255
94 iso_pu_bacteria 2919166419 2919168646 255
95 iso_pu_bacteria 2926754445 2926758933 255
96 iso_pu_bacteria 2926760298 2926763553 255
97 iso_pu_bacteria 2933006813 2933009866 255
98 iso_pu_bacteria 2933016740 2933019868 255
99 iso_pu_bacteria 2933594066 2933595820 255
100 iso_pu_bacteria 2979089926 2979091407 255
101 iso_pu_bacteria 2979095461 2979096930 255
102 iso_pu_bacteria 2979100975 2979101401 255
103 iso_pu_bacteria 2984509177 2984510647 255
104 iso_pu_bacteria 2984518228 2984518650 255
105 iso_pu_bacteria 2984537506 2984538996 255
106 iso_pu_bacteria 2984601300 2984605693 255
107 iso_pu_bacteria 3003930520 3003935407 255
108 iso_pu_bacteria 650716007 650843023 255
109 iso_pu_bacteria 2509276019 2509377253 256
110 iso_pu_bacteria 2510065057 2510302604 256
111 iso_pu_bacteria 2511231052 2511497636 256
112 iso_pu_bacteria 2512875026 2512969688 256
113 iso_pu_bacteria 2513237086 2513581767 256
114 iso_pu_bacteria 2513237089 2513603157 256
115 iso_pu_bacteria 2513237091 2513618338 256
116 iso_pu_bacteria 2513237144 2513908077 256
117 iso_pu_bacteria 2513237156 2513985228 256
118 iso_pu_bacteria 2513237160 2514004473 256
119 iso_pu_bacteria 2515154107 2515612767 256
120 iso_pu_bacteria 2516143018 2516206757 256
121 iso_pu_bacteria 2516653046 2516896699 256
122 iso_pu_bacteria 2517487022 2517565434 256
123 iso_pu_bacteria 2551306084 2551677166 256
124 iso_pu_bacteria 2551306085 2551688318 256
125 iso_pu_bacteria 2551306087 2551702674 256
126 iso_pu_bacteria 2551306089 2551712956 256
127 iso_pu_bacteria 2551306090 2551721279 256
128 iso_pu_bacteria 2551306090 2551722767 256
129 iso_pu_bacteria 2551306091 2551725455 256
130 iso_pu_bacteria 2551306093 2551745267 256
131 iso_pu_bacteria 2558860100 2558862222 256
132 iso_pu_bacteria 2585427634 2586003339 256
133 iso_pu_bacteria 2643221634 2644196025 256
134 iso_pu_bacteria 2643221688 2644494063 256
135 iso_pu_bacteria 2791355094 2792640312 256
136 iso_pu_bacteria 2802428858 2802716114 256
137 iso_pu_bacteria 2802428859 2802722848 256
138 iso_pu_bacteria 2802428860 2802729007 256
139 iso_pu_bacteria 2802428861 2802735401 256
140 iso_pu_bacteria 2802428862 2802742023 256
141 iso_pu_bacteria 2802428863 2802748473 256
142 iso_pu_bacteria 2838074704 2838075814 256
143 iso_pu_bacteria 2850079185 2850085391 256
144 iso_pu_bacteria 2855825444 2855828467 256
145 iso_pu_bacteria 2855839649 2855843580 256
146 iso_pu_bacteria 2858800743 2858807157 256
147 iso_pu_bacteria 2891373044 2891374624 256
148 iso_pu_bacteria 2896384573 2896388267 256
149 iso_pu_bacteria 2915980308 2915983811 256
150 iso_pu_bacteria 2915986958 2915992146 256
151 iso_pu_bacteria 2916007675 2916009934 256
152 iso_pu_bacteria 2916014648 2916015336 256
153 iso_pu_bacteria 2916021584 2916025539 256
154 iso_pu_bacteria 2916041962 2916043584 256
155 iso_pu_bacteria 2916048683 2916051731 256
156 iso_pu_bacteria 2916061851 2916068416 256
157 iso_pu_bacteria 2916068649 2916073215 256
158 iso_pu_bacteria 2916076590 2916076846 256
159 iso_pu_bacteria 2920760137 2920764369 256
160 iso_pu_bacteria 2921201388 2921204949 256
161 iso_pu_bacteria 2921208531 2921209120 256
162 iso_pu_bacteria 2921237296 2921241221 256
163 iso_pu_bacteria 2921244191 2921247325 256
164 iso_pu_bacteria 2921250672 2921257019 256
165 iso_pu_bacteria 2921257292 2921259807 256
166 iso_pu_bacteria 2921282425 2921285078 256
167 iso_pu_bacteria 2921289301 2921296089 256
168 iso_pu_bacteria 2924144063 2924150196 256
169 iso_pu_bacteria 2924150972 2924154338 256
170 iso_pu_bacteria 2924165586 2924172410 256
171 iso_pu_bacteria 2924186466 2924188023 256
172 iso_pu_bacteria 2924193448 2924195666 256
173 iso_pu_bacteria 2924200457 2924206130 256
174 iso_pu_bacteria 2924207177 2924210615 256
175 iso_pu_bacteria 2924214083 2924218562 256
176 iso_pu_bacteria 2924221636 2924225121 256
177 iso_pu_bacteria 2924228884 2924231150 256
178 iso_pu_bacteria 2936996657 2937001640 256
179 iso_pu_bacteria 2937002841 2937005473 256
180 iso_pu_bacteria 2937009748 2937014185 256
181 iso_pu_bacteria 2937016420 2937019110 256
182 iso_pu_bacteria 2937023124 2937026222 256
183 iso_pu_bacteria 2937029754 2937035131 256
184 iso_pu_bacteria 2937036028 2937038238 256
185 iso_pu_bacteria 2937049772 2937053544 256
186 iso_pu_bacteria 2937056579 2937061841 256
187 iso_pu_bacteria 2937078374 2937084212 256
188 iso_pu_bacteria 2937084907 2937089720 256
189 iso_pu_bacteria 2937106411 2937111394 256
190 iso_pu_bacteria 2937113482 2937116551 256
191 iso_pu_bacteria 2937119839 2937120616 256
192 iso_pu_bacteria 2937126314 2937128874 256
193 iso_pu_bacteria 2957375807 2957378508 256
194 iso_pu_bacteria 2957388812 2957392689 256
195 iso_pu_bacteria 2957395598 2957399073 256
196 iso_pu_bacteria 2957415311 2957416038 256
197 iso_pu_bacteria 2957422303 2957429317 256
198 iso_pu_bacteria 2957437181 2957440027 256
199 iso_pu_bacteria 2957457609 2957461280 256
200 iso_pu_bacteria 2957464669 2957467641 256
201 iso_pu_bacteria 2957471148 2957476967 256
202 iso_pu_bacteria 2957484790 2957487156 256
203 iso_pu_bacteria 2957498199 2957500448 256
204 iso_pu_bacteria 2957505466 2957506434 256
205 iso_pu_bacteria 2960591022 2960596602 256
206 iso_pu_bacteria 2960597568 2960598306 256
207 iso_pu_bacteria 2960610863 2960613553 256
208 iso_pu_bacteria 2960631154 2960634499 256
209 iso_pu_bacteria 2960637947 2960644065 256
210 iso_pu_bacteria 2960645483 2960646439 256
211 iso_pu_bacteria 2960652885 2960656049 256
212 iso_pu_bacteria 2960667422 2960670837 256
213 iso_pu_bacteria 2960674078 2960680443 256
214 iso_pu_bacteria 2960680706 2960683136 256
215 iso_pu_bacteria 2960687367 2960690683 256
216 iso_pu_bacteria 2960693952 2960698628 256
217 iso_pu_bacteria 2964607997 2964612102 256
218 iso_pu_bacteria 2964615318 2964618011 256
219 iso_pu_bacteria 2964621998 2964625168 256
220 iso_pu_bacteria 2964628898 2964631836 256
221 iso_pu_bacteria 2964643177 2964644454 256
222 iso_pu_bacteria 2964649959 2964654121 256
223 iso_pu_bacteria 2964663802 2964666649 256
224 iso_pu_bacteria 2964670856 2964671422 256
225 iso_pu_bacteria 2964678106 2964679522 256
226 iso_pu_bacteria 2964685014 2964685704 256
227 iso_pu_bacteria 2964691889 2964694896 256
228 iso_pu_bacteria 2964698721 2964703342 256
229 iso_pu_bacteria 2964719344 2964725085 256
230 iso_pu_bacteria 2967664464 2967669529 256
231 iso_pu_bacteria 2967671571 2967675469 256
232 iso_pu_bacteria 2967686174 2967687825 256
233 iso_pu_bacteria 2967693043 2967696844 256
234 iso_pu_bacteria 2967699805 2967706666 256
235 iso_pu_bacteria 2967706974 2967709411 256
236 iso_pu_bacteria 2967721400 2967723628 256
237 iso_pu_bacteria 2967728569 2967728921 256
238 iso_pu_bacteria 2967735183 2967737791 256
239 iso_pu_bacteria 2967742019 2967745761 256
240 iso_pu_bacteria 2967755722 2967759065 256
241 iso_pu_bacteria 2967762386 2967764991 256
242 iso_pu_bacteria 2967769361 2967774942 256
243 iso_pu_bacteria 2970026789 2970032069 256
244 iso_pu_bacteria 2970040964 2970044423 256
245 iso_pu_bacteria 2970054988 2970055332 256
246 iso_pu_bacteria 2970061556 2970064255 256
247 iso_pu_bacteria 2970082768 2970083869 256
248 iso_pu_bacteria 2970088815 2970090267 256
249 iso_pu_bacteria 2970102677 2970105560 256
250 iso_pu_bacteria 2970109326 2970109703 256
251 iso_pu_bacteria 2970116247 2970120053 256
252 iso_pu_bacteria 2970122695 2970125048 256
253 iso_pu_bacteria 2970129317 2970132982 256
254 iso_pu_bacteria 2970136068 2970137251 256
255 iso_pu_bacteria 2970143518 2970143833 256
256 iso_pu_bacteria 2970149975 2970156137 256
257 iso_pu_bacteria 2970170962 2970177834 256
258 iso_pu_bacteria 2970177841 2970179594 256
259 iso_pu_bacteria 2970191845 2970195622 256
260 iso_pu_bacteria 2977516862 2977518726 256
261 iso_pu_bacteria 2977523885 2977524164 256
262 iso_pu_bacteria 2977530762 2977532772 256
263 iso_pu_bacteria 2977544691 2977547858 256
264 iso_pu_bacteria 2977558990 2977565426 256
265 iso_pu_bacteria 2977565890 2977569437 256
266 iso_pu_bacteria 2977572785 2977573014 256
267 iso_pu_bacteria 2977579622 2977583309 256
268 iso_pu_bacteria 2989349275 2989354459 256
269 iso_pu_bacteria 3005409236 3005415375 256
270 iso_pu_bacteria 648276728 648740265 256
271 iso_pu_bacteria 8003992118 8003996158 256
272 iso_pu_bacteria 8003999396 8004003916 256
273 iso_pu_bacteria 8024486573 8024489093 256
274 3300025294 Ga0209025_1003844 Ga0209025_100384413 257
275 iso_pu_bacteria 2537561587 2537876840 257
276 iso_pu_bacteria 2599185210 2599602905 257
277 iso_pu_bacteria 2643221582 2643917424 257
278 iso_pu_bacteria 2643221591 2643964213 257
279 iso_pu_bacteria 2818991439 2819560641 257
280 iso_pu_bacteria 2842515876 2842518409 257
281 iso_pu_bacteria 2899792073 2899795074 257
282 iso_pu_bacteria 2899803654 2899805549 257
283 iso_pu_bacteria 2933011516 2933014035 257
284 iso_pu_bacteria 8003570095 8003574266 257
285 3300003316 rootH1_10062614 rootH1_100626143 258
286 3300003320 rootH2_10191709 rootH2_101917092 258
287 3300003322 rootL2_10046745 rootL2_1004674519 258
288 3300005262 Ga0065165_1003320 Ga0065165_10033207 258
289 3300005539 Ga0068853_100414808 Ga0068853_1004148082 258
290 3300005548 Ga0070665_100067050 Ga0070665_1000670504 258
291 3300006042 Ga0075368_10078392 Ga0075368_100783922 258
292 3300006177 Ga0075362_10124770 Ga0075362_101247702 258
293 3300006178 Ga0075367_10007206 Ga0075367_100072062 258
294 3300006178 Ga0075367_10107928 Ga0075367_101079282 258
295 3300006195 Ga0075366_10081552 Ga0075366_100815524 258
296 3300006353 Ga0075370_10040504 Ga0075370_100405042 258
297 3300009093 Ga0105240_10003934 Ga0105240_100039348 258
298 3300009545 Ga0105237_10009270 Ga0105237_1000927010 258
299 3300010375 Ga0105239_10012978 Ga0105239_100129783 258
300 3300013104 Ga0157370_10047376 Ga0157370_100473763 258
301 3300015265 Ga0182005_1032631 Ga0182005_10326312 258
302 3300025273 Ga0209673_1000594 Ga0209673_100059458 258
303 3300025273 Ga0209673_1028295 Ga0209673_10282952 258
304 3300025284 Ga0209130_1009092 Ga0209130_10090922 258
305 3300025295 Ga0209564_1000306 Ga0209564_100030693 258
306 3300025299 Ga0209256_1000246 Ga0209256_100024693 258
307 3300025913 Ga0207695_10000381 Ga0207695_10000381104 258
308 3300025914 Ga0207671_10000252 Ga0207671_1000025267 258
309 3300027312 Ga0209371_1000282 Ga0209371_100028235 258
310 3300027866 Ga0209813_10110942 Ga0209813_101109422 258
311 3300030500 Ga0268256_1000529 Ga0268256_100052910 258
312 3300031995 Ga0307409_100709841 Ga0307409_1007098412 258
313 3300041443 Ga0451789_0542633 Ga0451789_0542633_889_1668 258
314 3300041491 Ga0451833_0722895 Ga0451833_0722895_39_818 258
315 3300045976 Ga0466967_0449661 Ga0466967_0449661_348_1124 258
316 3300046452 Ga0495617_116776 Ga0495617_116776_22_798 258
317 3300046519 Ga0495632_0012394 Ga0495632_0012394_2048_2824 258
318 3300048903 Ga0496100_0014099 Ga0496100_0014099_1877_2653 258
319 3300048906 Ga0496103_0055110 Ga0496103_0055110_123_899 258
320 3300048919 Ga0496116_0000798 Ga0496116_0000798_38737_39513 258
321 3300048919 Ga0496116_0093470 Ga0496116_0093470_81_857 258
322 3300048920 Ga0496117_0003226 Ga0496117_0003226_2584_3360 258
323 3300048921 Ga0496118_0027861 Ga0496118_0027861_962_1738 258
324 3300048921 Ga0496118_0043894 Ga0496118_0043894_2584_3360 258
325 3300048922 Ga0496119_0009364 Ga0496119_0009364_2622_3398 258
326 3300048922 Ga0496119_0038034 Ga0496119_0038034_166_942 258
327 3300048923 Ga0496120_0001532 Ga0496120_0001532_4690_5466 258
328 3300048923 Ga0496120_0114481 Ga0496120_0114481_221_997 258
329 3300048924 Ga0496121_0001782 Ga0496121_0001782_12588_13364 258
330 3300048925 Ga0496122_0001625 Ga0496122_0001625_31720_32496 258
331 3300048926 Ga0496123_0006902 Ga0496123_0006902_7346_8122 258
332 3300048926 Ga0496123_0060012 Ga0496123_0060012_1121_1897 258
333 3300048927 Ga0496124_0006268 Ga0496124_0006268_4762_5538 258
334 3300048927 Ga0496124_0108992 Ga0496124_0108992_350_1126 258
335 3300048927 Ga0496124_0193570 Ga0496124_0193570_331_1107 258
336 3300048928 Ga0496125_0004338 Ga0496125_0004338_6221_6997 258
337 3300048928 Ga0496125_0024719 Ga0496125_0024719_3854_4630 258
338 3300048929 Ga0496126_0008806 Ga0496126_0008806_2570_3346 258
339 3300048929 Ga0496126_0022862 Ga0496126_0022862_4715_5491 258
340 3300048929 Ga0496126_0176011 Ga0496126_0176011_316_1092 258
341 3300050489 nmdc:mga03683_5271_c1 nmdc:mga03683_5271_c1_1689_2465 258
342 3300050491 nmdc:mga00v17_118238_c1 nmdc:mga00v17_118238_c1_558_1334 258
343 3300050491 nmdc:mga00v17_79301_c1 nmdc:mga00v17_79301_c1_514_1290 258
344 3300050495 nmdc:mga04h51_57122_c1 nmdc:mga04h51_57122_c1_153_929 258
345 iso_pu_bacteria 2791355082 2792579791 258
346 iso_pu_bacteria 2913295892 2913297109 258
347 iso_pu_bacteria 2989771324 2989776274 258
348 iso_pu_bacteria 8049293176 8049298208 258
349 3300005548 Ga0070665_100050930 Ga0070665_1000509302 259
350 3300006051 Ga0075364_10052305 Ga0075364_100523053 259
351 3300006051 Ga0075364_10132321 Ga0075364_101323212 259
352 3300006051 Ga0075364_10133936 Ga0075364_101339362 259
353 3300006177 Ga0075362_10065472 Ga0075362_100654722 259
354 3300006195 Ga0075366_10002007 Ga0075366_100020075 259
355 3300006195 Ga0075366_10191123 Ga0075366_101911232 259
356 3300006948 Ga0099826_10046262 Ga0099826_100462622 259
357 3300025935 Ga0207709_10031248 Ga0207709_100312482 259
358 3300027666 Ga0209282_1037250 Ga0209282_10372504 259
359 3300028379 Ga0268266_10036738 Ga0268266_100367382 259
360 3300030744 Ga0316181_1002114 Ga0316181_10021143 259
361 3300037471 Ga0395905_0000398 Ga0395905_0000398_24616_25395 259
362 3300041413 Ga0439465_0001348 Ga0439465_0001348_3908_4687 259
363 3300042006 Ga0439432_020378 Ga0439432_020378_354_1133 259
364 3300048926 Ga0496123_0009415 Ga0496123_0009415_2620_3399 259
365 3300049571 Ga0501034_0106661 Ga0501034_0106661_1813_2595 259
366 3300050491 nmdc:mga00v17_51585_c1 nmdc:mga00v17_51585_c1_769_1548 259
367 3300050493 nmdc:mga0k408_184599_c1 nmdc:mga0k408_184599_c1_126_905 259
368 3300053107 Ga0500560_009606 Ga0500560_009606_992_1771 259
369 3300005262 Ga0065165_1005358 Ga0065165_10053585 260
370 3300005331 Ga0070670_100000464 Ga0070670_10000046433 260
371 3300025258 Ga0209129_1000203 Ga0209129_100020325 260
372 3300025294 Ga0209025_1001447 Ga0209025_100144725 260
373 3300025294 Ga0209025_1077741 Ga0209025_10777411 260
374 3300025297 Ga0209758_1040046 Ga0209758_10400463 260
375 3300025925 Ga0207650_10118947 Ga0207650_101189473 260
376 3300041413 Ga0439465_0021758 Ga0439465_0021758_1180_1962 260
377 3300046460 Ga0495638_0000416 Ga0495638_0000416_28320_29102 260
378 3300048924 Ga0496121_0000337 Ga0496121_0000337_72033_72815 260
379 3300048927 Ga0496124_0002362 Ga0496124_0002362_8524_9306 260
380 3300048928 Ga0496125_0000617 Ga0496125_0000617_7780_8562 260
381 3300048928 Ga0496125_0103701 Ga0496125_0103701_850_1632 260
382 3300048929 Ga0496126_0000808 Ga0496126_0000808_46495_47277 260
383 3300003856 Ga0058692_1003848 Ga0058692_10038483 261
384 3300006948 Ga0099826_10000054 Ga0099826_1000005438 261
385 3300009148 Ga0105243_10009447 Ga0105243_100094476 261
386 3300011119 Ga0105246_10068708 Ga0105246_100687083 261
387 3300013100 Ga0157373_10051720 Ga0157373_100517202 261
388 3300013102 Ga0157371_10000002 Ga0157371_10000002449 261
389 3300013104 Ga0157370_10000286 Ga0157370_1000028629 261
390 3300027312 Ga0209371_1000012 Ga0209371_1000012192 261
391 3300027312 Ga0209371_1002204 Ga0209371_100220413 261
392 3300027666 Ga0209282_1000140 Ga0209282_100014020 261
393 3300030500 Ga0268256_1000013 Ga0268256_1000013192 261
394 3300030500 Ga0268256_1004573 Ga0268256_10045738 261
395 3300048907 Ga0496104_0055811 Ga0496104_0055811_2519_3304 261
396 3300048910 Ga0496107_0058500 Ga0496107_0058500_796_1632 261
397 3300048913 Ga0496110_0049044 Ga0496110_0049044_996_1781 261
398 3300048914 Ga0496111_0131742 Ga0496111_0131742_839_1624 261
399 3300048919 Ga0496116_0073600 Ga0496116_0073600_108_893 261
400 3300048920 Ga0496117_0000016 Ga0496117_0000016_325954_326739 261
401 3300048920 Ga0496117_0029643 Ga0496117_0029643_997_1833 261
402 3300048920 Ga0496117_0062842 Ga0496117_0062842_423_1208 261
403 3300048921 Ga0496118_0000535 Ga0496118_0000535_18325_19110 261
404 3300048921 Ga0496118_0023796 Ga0496118_0023796_2161_2946 261
405 3300048922 Ga0496119_0019517 Ga0496119_0019517_564_1349 261
406 3300048923 Ga0496120_0000056 Ga0496120_0000056_14931_15716 261
407 3300048925 Ga0496122_0000002 Ga0496122_0000002_326615_327400 261
408 3300048925 Ga0496122_0114746 Ga0496122_0114746_157_993 261
409 3300048926 Ga0496123_0000002 Ga0496123_0000002_1484283_1485068 261
410 3300048926 Ga0496123_0000002 Ga0496123_0000002_326615_327400 261
411 3300048926 Ga0496123_0013695 Ga0496123_0013695_5239_6075 261
412 3300048926 Ga0496123_0126420 Ga0496123_0126420_452_1237 261
413 3300048927 Ga0496124_0031298 Ga0496124_0031298_1422_2207 261
414 3300048927 Ga0496124_0079937 Ga0496124_0079937_484_1269 261
415 3300048927 Ga0496124_0117727 Ga0496124_0117727_143_928 261
416 3300048928 Ga0496125_0001969 Ga0496125_0001969_16112_16897 261
417 3300048928 Ga0496125_0057247 Ga0496125_0057247_1666_2451 261
418 3300048928 Ga0496125_0183362 Ga0496125_0183362_271_1056 261
419 3300048928 Ga0496125_0236940 Ga0496125_0236940_74_910 261
420 3300048929 Ga0496126_0000670 Ga0496126_0000670_33753_34589 261
421 3300048929 Ga0496126_0139458 Ga0496126_0139458_528_1313 261
422 3300048929 Ga0496126_0286534 Ga0496126_0286534_466_1251 261
423 3300050489 nmdc:mga03683_75370_c1 nmdc:mga03683_75370_c1_143_928 261
424 3300050490 nmdc:mga03n38_23709_c1 nmdc:mga03n38_23709_c1_116_901 261
425 3300050491 nmdc:mga00v17_3_c1 nmdc:mga00v17_3_c1_105821_106606 261
426 3300050492 nmdc:mga0yw44_3130_c1 nmdc:mga0yw44_3130_c1_1228_2013 261
427 3300050493 nmdc:mga0k408_3057_c2 nmdc:mga0k408_3057_c2_2016_2801 261
428 3300050516 nmdc:mga0sz30_486_c1 nmdc:mga0sz30_486_c1_8290_9075 261
429 3300053137 Ga0500561_0000032 Ga0500561_0000032_18603_19388 261
430 3300021321 Ga0214542_1000081 Ga0214542_100008136 262
431 3300021327 Ga0214543_1000042 Ga0214543_100004279 262
432 3300049571 Ga0501034_0119403 Ga0501034_0119403_652_1449 262
433 iso_pu_bacteria 2643221599 2644004167 263
434 3300025284 Ga0209130_1017529 Ga0209130_10175292 264
435 3300053177 Ga0500636_0000011 Ga0500636_0000011_124155_124955 264
436 3300002773 JGI25152J39213_1000471 JGI25152J39213_100047130 265
437 3300002774 JGI25150J39212_1000343 JGI25150J39212_100034330 265
438 3300003187 JGI25151J46595_10000893 JGI25151J46595_100008932 265
439 3300003323 rootH1_10212331 rootH1_102123313 265
440 3300025245 Ga0207425_1000500 Ga0207425_100050027 265
441 3300025258 Ga0209129_1000602 Ga0209129_100060227 265
442 3300025294 Ga0209025_1001893 Ga0209025_100189327 265
443 3300025297 Ga0209758_1001723 Ga0209758_100172327 265

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

52

249

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

58

302

0.9

PF08659

KR

KR domain

53

230

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3edm-assembly1.cif.gz_D crystal structure of a short chain dehydrogenase from agrobacterium tumefaciens 0.966 10 257
3edm-assembly1.cif.gz_C crystal structure of a short chain dehydrogenase from agrobacterium tumefaciens 0.9552 10 257
4iin-assembly1.cif.gz_B crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from helicobacter pylori 26695 complexed with nad+ 0.949 11 261
5itv-assembly3.cif.gz_D crystal structure of bacillus subtilis bacc dihydroanticapsin 7-dehydrogenase in complex with nadh 0.9487 11 260
5k9z-assembly2.cif.gz_D crystal structure of putative short-chain dehydrogenase/reductase from burkholderia xenovorans lb400 0.9483 10 257
ID Description Score Start End Superfamily
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9636 11 91 3.40.50.720
af_A0A0R0HUJ2_8_65_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9539 12 57 3.40.50.720
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9532 10 189 3.40.50.720
5k9zA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9523 10 257 3.40.50.720
4iinB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.949 11 261 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6J4PXC9-F1-model_v4 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.9783 11 188 GO:0004316
AF-A0A0C1YFZ9-F1-model_v4 deleted 0.9704 11 197
AF-A0A3N5P894-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9703 11 200 GO:0016616
AF-A0A2W6T3P7-F1-model_v4 Short-chain dehydrogenase 0.9689 10 192 GO:0016491
AF-A0A434D224-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9679 10 198 GO:0016616

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pLDDT pTM Quality
87.93 0.88 High
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Predicted Structure (AlphaFold2)

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