F439061

General Info

Members Datasets Scaffolds Average Seq Length
417 147 834 160

Family's Representative Sequence

Representative Sequence 3300013100|Ga0157373_10092674|Ga0157373_100926742
Length 173
Sequence MSTPEPRFITPQGFARIRAEYEQLFSVERPTLVETISWAAGNGDRSENGDYIYGRKRLREIDRRLGYLSKVMKGAKVVDPAEQPTRDQVRFGATVELADEEDNRRTVTIVGNDEADASAARIAWNAPLSRALLGARVGDERIVRLPSGEKSYEILAISYPQPRGSTVREAASG

Samples

Sample ID Description Type Environment
1 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
6 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
10 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
114 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
115 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
116 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
119 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
120 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
121 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
122 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
126 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
127 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
128 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
129 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
132 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
135 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
136 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
144 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
145 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.76
Metatranscriptomes 0
Isolates 0.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.16
Rhizosphere 97.12
Stem 0
Stem Tuber 0
Unclassified 2.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157373_10092674 3300013100 Bacteria 2128
2 MBSR1b_contig_11806715 2162886012 Bacteria 921
3 JGI24739J22299_10094229 3300001989 Bacteria 909
4 JGI24737J22298_10005335 3300001990 Bacteria 4445
5 JGI24737J22298_10009400 3300001990 Bacteria 3253
6 JGI24034J26672_10016521 3300002239 Bacteria 1137
7 JGI24751J29686_10066665 3300002459 Unclassified 741
8 rootL2_10261143 3300003322 Bacteria 1557
9 rootH1_10060436 3300003323 Bacteria 1231
10 Ga0065712_10068318 3300005290 Bacteria 11756
11 Ga0065712_10120737 3300005290 Bacteria 1675
12 Ga0065715_10097614 3300005293 Bacteria 3676
13 Ga0065715_10207960 3300005293 Bacteria 1328
14 Ga0070658_10042084 3300005327 Bacteria 3687
15 Ga0070658_10534996 3300005327 Bacteria 1013
16 Ga0070658_10732713 3300005327 Bacteria 858
17 Ga0070658_10959773 3300005327 Unclassified 743
18 Ga0070658_11017082 3300005327 Bacteria 721
19 Ga0070676_10094585 3300005328 Bacteria 1836
20 Ga0070676_10868055 3300005328 Bacteria 670
21 Ga0070683_100424797 3300005329 Bacteria 1268
22 Ga0070683_100714892 3300005329 Bacteria 959
23 Ga0070670_100001001 3300005331 Bacteria 22252
24 Ga0070670_100001868 3300005331 Bacteria 17163
25 Ga0070670_100002224 3300005331 Bacteria 15937
26 Ga0070670_100133349 3300005331 Bacteria 2146
27 Ga0070670_100266659 3300005331 Bacteria 1494
28 Ga0070677_10034897 3300005333 Bacteria 1946
29 Ga0070666_10015266 3300005335 Bacteria 4898
30 Ga0070682_100165658 3300005337 Bacteria 1531
31 Ga0070660_100171908 3300005339 Bacteria 1750
32 Ga0070660_100244535 3300005339 Bacteria 1462
33 Ga0070661_100068571 3300005344 Bacteria 2607
34 Ga0070692_10045519 3300005345 Bacteria 2264
35 Ga0070669_100198097 3300005353 Bacteria 1579
36 Ga0070669_100563931 3300005353 Bacteria 951
37 Ga0070669_101064555 3300005353 Bacteria 696
38 Ga0070675_100001926 3300005354 Bacteria 15354
39 Ga0070675_100024953 3300005354 Bacteria 4791
40 Ga0070675_100439060 3300005354 Bacteria 1169
41 Ga0070675_101036848 3300005354 Bacteria 753
42 Ga0070671_100000446 3300005355 Bacteria 28672
43 Ga0070671_100012323 3300005355 Bacteria 6884
44 Ga0070671_100012774 3300005355 Bacteria 6773
45 Ga0070674_100296582 3300005356 Bacteria 1287
46 Ga0070673_100009788 3300005364 Bacteria 6454
47 Ga0070673_100488744 3300005364 Bacteria 1112
48 Ga0070673_100972435 3300005364 Unclassified 789
49 Ga0070659_100003111 3300005366 Bacteria 11806
50 Ga0070659_100041924 3300005366 Bacteria 3579
51 Ga0070659_100582531 3300005366 Bacteria 960
52 Ga0070667_100040341 3300005367 Bacteria 3915
53 Ga0070663_100137133 3300005455 Bacteria 1864
54 Ga0070663_100442934 3300005455 Bacteria 1069
55 Ga0070678_100310696 3300005456 Bacteria 1343
56 Ga0070678_101091992 3300005456 Bacteria 736
57 Ga0070662_100176014 3300005457 Bacteria 1684
58 Ga0070662_100254456 3300005457 Bacteria 1413
59 Ga0070662_100423807 3300005457 Bacteria 1101
60 Ga0070662_100504884 3300005457 Bacteria 1009
61 Ga0070681_10037282 3300005458 Bacteria 4879
62 Ga0070681_10195325 3300005458 Bacteria 1943
63 Ga0068867_100768484 3300005459 Bacteria 856
64 Ga0070679_100049871 3300005530 Bacteria 4170
65 Ga0070679_100624416 3300005530 Bacteria 1021
66 Ga0070684_100515916 3300005535 Bacteria 1108
67 Ga0068853_100067088 3300005539 Bacteria 3116
68 Ga0068853_100108026 3300005539 Bacteria 2468
69 Ga0070672_100001499 3300005543 Bacteria 14494
70 Ga0070672_100069476 3300005543 Bacteria 2797
71 Ga0070672_100175538 3300005543 Bacteria 1784
72 Ga0070693_100052881 3300005547 Bacteria 2330
73 Ga0070665_100066161 3300005548 Bacteria 3625
74 Ga0070665_100701370 3300005548 Bacteria 1025
75 Ga0068855_100614269 3300005563 Bacteria 1171
76 Ga0070664_100439246 3300005564 Bacteria 1197
77 Ga0070664_100524281 3300005564 Bacteria 1094
78 Ga0068854_100498655 3300005578 Bacteria 1025
79 Ga0068854_101095450 3300005578 Bacteria 709
80 Ga0068856_100086343 3300005614 Bacteria 3117
81 Ga0068856_101442241 3300005614 Bacteria 702
82 Ga0068856_102389363 3300005614 Bacteria 536
83 Ga0068852_100155199 3300005616 Bacteria 2132
84 Ga0068852_100721808 3300005616 Bacteria 1008
85 Ga0068852_100829632 3300005616 Bacteria 939
86 Ga0068864_100035408 3300005618 Bacteria 4250
87 Ga0068864_100065701 3300005618 Bacteria 3147
88 Ga0068864_100283103 3300005618 Unclassified 1548
89 Ga0068861_100331225 3300005719 Bacteria 1329
90 Ga0068870_10959577 3300005840 Bacteria 607
91 Ga0068863_100499127 3300005841 Bacteria 1198
92 Ga0068862_101319228 3300005844 Bacteria 723
93 Ga0097621_100314746 3300006237 Bacteria 1385
94 Ga0068871_100899590 3300006358 Bacteria 820
95 Ga0068871_101403334 3300006358 Bacteria 658
96 Ga0075431_100017848 3300006847 Bacteria 7216
97 Ga0068865_101065371 3300006881 Bacteria 711
98 Ga0105248_10003593 3300009177 Bacteria 17186
99 Ga0105248_10050579 3300009177 Bacteria 4662
100 Ga0157373_10026335 3300013100 Bacteria 4201
101 Ga0157373_10341094 3300013100 Bacteria 1068
102 Ga0157371_10024276 3300013102 Bacteria 4429
103 Ga0157371_10026742 3300013102 Bacteria 4190
104 Ga0157371_10205623 3300013102 Bacteria 1412
105 Ga0157371_10440299 3300013102 Bacteria 957
106 Ga0157369_10112120 3300013105 Bacteria 2898
107 Ga0163162_10163947 3300013306 Bacteria 2346
108 Ga0157372_10375118 3300013307 Bacteria 1658
109 Ga0157372_10427370 3300013307 Bacteria 1544
110 Ga0157375_10015694 3300013308 Bacteria 6785
111 Ga0157375_10022779 3300013308 Bacteria 5768
112 Ga0163163_10050026 3300014325 Bacteria 4115
113 Ga0163163_10066315 3300014325 Bacteria 3585
114 Ga0157380_10004104 3300014326 Bacteria 10058
115 Ga0157380_10067565 3300014326 Bacteria 2879
116 Ga0157380_10629046 3300014326 Bacteria 1067
117 Ga0157379_11652218 3300014968 Bacteria 626
118 Ga0163161_10007608 3300017792 Bacteria 7494
119 Ga0163161_10233939 3300017792 Bacteria 1427
120 Ga0163161_10290837 3300017792 Bacteria 1284
121 Ga0207697_10037712 3300025315 Bacteria 1981
122 Ga0207688_10047213 3300025901 Bacteria 2405
123 Ga0207647_10006147 3300025904 Bacteria 8744
124 Ga0207647_10055793 3300025904 Bacteria 2426
125 Ga0207645_10831899 3300025907 Bacteria 628
126 Ga0207705_10000931 3300025909 Bacteria 23900
127 Ga0207705_10003070 3300025909 Bacteria 12729
128 Ga0207705_10021084 3300025909 Bacteria 4648
129 Ga0207705_10152268 3300025909 Bacteria 1733
130 Ga0207705_10414984 3300025909 Bacteria 1042
131 Ga0207705_10636258 3300025909 Bacteria 829
132 Ga0207705_10896103 3300025909 Bacteria 687
133 Ga0207705_10994775 3300025909 Bacteria 648
134 Ga0207707_10139491 3300025912 Bacteria 2120
135 Ga0207707_10466741 3300025912 Bacteria 1079
136 Ga0207660_10060117 3300025917 Bacteria 2730
137 Ga0207657_10002684 3300025919 Bacteria 19173
138 Ga0207657_10003904 3300025919 Bacteria 15817
139 Ga0207657_10006647 3300025919 Bacteria 11966
140 Ga0207657_10078946 3300025919 Bacteria 2770
141 Ga0207649_10152311 3300025920 Bacteria 1594
142 Ga0207681_10062680 3300025923 Bacteria 2561
143 Ga0207681_10373693 3300025923 Bacteria 1146
144 Ga0207681_10535109 3300025923 Bacteria 963
145 Ga0207650_10000583 3300025925 Bacteria 29313
146 Ga0207650_10005175 3300025925 Bacteria 8901
147 Ga0207650_10048051 3300025925 Bacteria 3145
148 Ga0207650_10105753 3300025925 Bacteria 2173
149 Ga0207650_10202615 3300025925 Bacteria 1590
150 Ga0207659_10001196 3300025926 Bacteria 15472
151 Ga0207659_10384741 3300025926 Bacteria 1171
152 Ga0207644_10030441 3300025931 Bacteria 3754
153 Ga0207644_10046872 3300025931 Bacteria 3081
154 Ga0207690_10011101 3300025932 Bacteria 5373
155 Ga0207690_10028561 3300025932 Bacteria 3536
156 Ga0207690_10525380 3300025932 Bacteria 960
157 Ga0207690_11069032 3300025932 Bacteria 672
158 Ga0207706_10056758 3300025933 Bacteria 3452
159 Ga0207706_10061968 3300025933 Bacteria 3295
160 Ga0207706_10255519 3300025933 Bacteria 1530
161 Ga0207706_10331170 3300025933 Bacteria 1325
162 Ga0207706_10560156 3300025933 Bacteria 983
163 Ga0207704_10338551 3300025938 Bacteria 1167
164 Ga0207704_10411425 3300025938 Bacteria 1070
165 Ga0207691_10003881 3300025940 Bacteria 14511
166 Ga0207691_10083718 3300025940 Bacteria 2864
167 Ga0207691_10122394 3300025940 Bacteria 2304
168 Ga0207711_10006336 3300025941 Bacteria 9978
169 Ga0207711_10070151 3300025941 Bacteria 3039
170 Ga0207661_10604776 3300025944 Bacteria 1006
171 Ga0207661_10721389 3300025944 Bacteria 917
172 Ga0207661_11044248 3300025944 Bacteria 752
173 Ga0207679_10010208 3300025945 Bacteria 6040
174 Ga0207679_10179621 3300025945 Bacteria 1750
175 Ga0207679_11074322 3300025945 Bacteria 738
176 Ga0207651_10143911 3300025960 Bacteria 1846
177 Ga0207651_10832626 3300025960 Unclassified 819
178 Ga0207640_10240429 3300025981 Bacteria 1399
179 Ga0207640_10759466 3300025981 Bacteria 837
180 Ga0207658_10012450 3300025986 Bacteria 5812
181 Ga0207639_10038692 3300026041 Bacteria 3549
182 Ga0207639_10159700 3300026041 Bacteria 1898
183 Ga0207678_10046800 3300026067 Bacteria 3741
184 Ga0207678_10123878 3300026067 Bacteria 2206
185 Ga0207678_10159468 3300026067 Bacteria 1927
186 Ga0207678_10265640 3300026067 Bacteria 1471
187 Ga0207678_10598799 3300026067 Bacteria 966
188 Ga0207678_10776834 3300026067 Bacteria 845
189 Ga0207678_11552860 3300026067 Bacteria 584
190 Ga0207708_11167379 3300026075 Unclassified 673
191 Ga0207676_10076790 3300026095 Bacteria 2700
192 Ga0207676_10240672 3300026095 Unclassified 1623
193 Ga0207674_10002230 3300026116 Bacteria 24529
194 Ga0207675_100378551 3300026118 Bacteria 1391
195 Ga0207675_101117787 3300026118 Bacteria 808
196 Ga0207683_10664380 3300026121 Unclassified 966
197 Ga0207683_11076955 3300026121 Bacteria 746
198 Ga0207698_10128720 3300026142 Bacteria 2159
199 Ga0207698_10219350 3300026142 Bacteria 1717
200 Ga0209983_1025118 3300027665 Bacteria 1256
201 Ga0268266_10015830 3300028379 Bacteria 6457
202 Ga0268266_10325773 3300028379 Bacteria 1439
203 Ga0307408_100008022 3300031548 Bacteria 6980
204 Ga0307408_100010478 3300031548 Bacteria 6113
205 Ga0307408_100083598 3300031548 Bacteria 2392
206 Ga0307408_100180785 3300031548 Bacteria 1691
207 Ga0307408_100476954 3300031548 Bacteria 1087
208 Ga0307408_100755246 3300031548 Unclassified 879
209 Ga0307408_100907996 3300031548 Bacteria 806
210 Ga0307405_10024786 3300031731 Bacteria 3433
211 Ga0307405_10037640 3300031731 Bacteria 2909
212 Ga0307405_10090241 3300031731 Bacteria 2027
213 Ga0307405_10287713 3300031731 Bacteria 1240
214 Ga0307405_10336513 3300031731 Bacteria 1159
215 Ga0307405_10417797 3300031731 Bacteria 1054
216 Ga0307405_10548668 3300031731 Bacteria 935
217 Ga0307413_10002137 3300031824 Bacteria 7940
218 Ga0307413_10005218 3300031824 Bacteria 5763
219 Ga0307413_10017627 3300031824 Bacteria 3724
220 Ga0307413_10054186 3300031824 Bacteria 2432
221 Ga0307413_10066789 3300031824 Bacteria 2246
222 Ga0307413_10076516 3300031824 Bacteria 2127
223 Ga0307413_10104638 3300031824 Bacteria 1880
224 Ga0307413_10208387 3300031824 Bacteria 1417
225 Ga0307413_10224546 3300031824 Bacteria 1374
226 Ga0307413_10317429 3300031824 Bacteria 1189
227 Ga0307413_10398482 3300031824 Bacteria 1077
228 Ga0307413_10478073 3300031824 Bacteria 995
229 Ga0307413_11513650 3300031824 Bacteria 593
230 Ga0307413_11616600 3300031824 Bacteria 576
231 Ga0307410_10006291 3300031852 Bacteria 6395
232 Ga0307410_10009618 3300031852 Bacteria 5435
233 Ga0307410_10091980 3300031852 Bacteria 2155
234 Ga0307410_10145399 3300031852 Bacteria 1759
235 Ga0307410_10304956 3300031852 Bacteria 1258
236 Ga0307410_10306175 3300031852 Bacteria 1255
237 Ga0307410_10322315 3300031852 Bacteria 1226
238 Ga0307410_10334272 3300031852 Bacteria 1206
239 Ga0307410_10593108 3300031852 Bacteria 923
240 Ga0307410_10792499 3300031852 Bacteria 805
241 Ga0307410_11289384 3300031852 Bacteria 638
242 Ga0307406_10034618 3300031901 Bacteria 3099
243 Ga0307406_10051143 3300031901 Bacteria 2622
244 Ga0307406_10118085 3300031901 Bacteria 1838
245 Ga0307406_10337877 3300031901 Bacteria 1172
246 Ga0307406_10451738 3300031901 Bacteria 1031
247 Ga0307406_10486731 3300031901 Bacteria 997
248 Ga0307406_10522188 3300031901 Bacteria 966
249 Ga0307407_10039172 3300031903 Bacteria 2633
250 Ga0307407_10053373 3300031903 Bacteria 2325
251 Ga0307407_10095302 3300031903 Bacteria 1834
252 Ga0307407_10135813 3300031903 Bacteria 1580
253 Ga0307407_10148413 3300031903 Bacteria 1521
254 Ga0307407_10202993 3300031903 Bacteria 1330
255 Ga0307407_10241333 3300031903 Bacteria 1233
256 Ga0307407_10276164 3300031903 Bacteria 1162
257 Ga0307407_10585675 3300031903 Bacteria 829
258 Ga0307407_10591635 3300031903 Bacteria 825
259 Ga0307407_10639057 3300031903 Bacteria 796
260 Ga0307412_10004315 3300031911 Bacteria 7927
261 Ga0307412_10013789 3300031911 Bacteria 4748
262 Ga0307412_10029139 3300031911 Bacteria 3462
263 Ga0307412_10045123 3300031911 Bacteria 2879
264 Ga0307412_10054824 3300031911 Bacteria 2648
265 Ga0307412_10065929 3300031911 Bacteria 2452
266 Ga0307412_10319155 3300031911 Bacteria 1235
267 Ga0307412_10466286 3300031911 Bacteria 1044
268 Ga0307412_10621738 3300031911 Bacteria 917
269 Ga0307409_100010448 3300031995 Bacteria 5775
270 Ga0307409_100028685 3300031995 Bacteria 3970
271 Ga0307409_100078484 3300031995 Bacteria 2656
272 Ga0307409_100086905 3300031995 Bacteria 2546
273 Ga0307409_100116131 3300031995 Bacteria 2255
274 Ga0307409_100126000 3300031995 Bacteria 2178
275 Ga0307409_100137527 3300031995 Bacteria 2099
276 Ga0307409_100235586 3300031995 Bacteria 1663
277 Ga0307409_100276558 3300031995 Bacteria 1549
278 Ga0307409_100428032 3300031995 Bacteria 1271
279 Ga0307409_100964045 3300031995 Bacteria 869
280 Ga0307416_100006587 3300032002 Bacteria 7285
281 Ga0307416_100041688 3300032002 Bacteria 3577
282 Ga0307416_100063727 3300032002 Bacteria 3020
283 Ga0307416_100065183 3300032002 Bacteria 2992
284 Ga0307416_100076949 3300032002 Bacteria 2800
285 Ga0307416_100224319 3300032002 Bacteria 1805
286 Ga0307416_100589654 3300032002 Bacteria 1190
287 Ga0307416_100834828 3300032002 Bacteria 1019
288 Ga0307416_100997681 3300032002 Bacteria 940
289 Ga0307414_10009022 3300032004 Bacteria 5704
290 Ga0307414_10020621 3300032004 Bacteria 4112
291 Ga0307414_10022445 3300032004 Bacteria 3980
292 Ga0307414_10052600 3300032004 Bacteria 2835
293 Ga0307414_10055481 3300032004 Bacteria 2774
294 Ga0307414_10067829 3300032004 Bacteria 2557
295 Ga0307414_10210602 3300032004 Bacteria 1588
296 Ga0307414_10267071 3300032004 Bacteria 1431
297 Ga0307414_10542599 3300032004 Bacteria 1035
298 Ga0307414_10548679 3300032004 Bacteria 1030
299 Ga0307414_10770074 3300032004 Bacteria 876
300 Ga0307414_10781913 3300032004 Bacteria 869
301 Ga0307414_10964388 3300032004 Bacteria 784
302 Ga0307414_11041399 3300032004 Bacteria 754
303 Ga0307414_11073169 3300032004 Bacteria 743
304 Ga0307414_11231805 3300032004 Bacteria 693
305 Ga0307411_10011140 3300032005 Bacteria 4835
306 Ga0307411_10030651 3300032005 Bacteria 3299
307 Ga0307411_10044363 3300032005 Bacteria 2851
308 Ga0307411_10089991 3300032005 Bacteria 2139
309 Ga0307411_10115967 3300032005 Bacteria 1927
310 Ga0307411_10118762 3300032005 Bacteria 1908
311 Ga0307411_10190014 3300032005 Bacteria 1567
312 Ga0307411_10198812 3300032005 Bacteria 1537
313 Ga0307411_10225910 3300032005 Unclassified 1456
314 Ga0307411_10267042 3300032005 Bacteria 1354
315 Ga0307411_10289938 3300032005 Bacteria 1307
316 Ga0307411_10553274 3300032005 Bacteria 982
317 Ga0307411_10680145 3300032005 Bacteria 894
318 Ga0307411_11479618 3300032005 Bacteria 623
319 Ga0307415_100028476 3300032126 Bacteria 3555
320 Ga0307415_100104804 3300032126 Bacteria 2084
321 Ga0307415_100108043 3300032126 Bacteria 2057
322 Ga0307415_100284959 3300032126 Bacteria 1360
323 Ga0307415_100631494 3300032126 Bacteria 957
324 Ga0307415_102149917 3300032126 Bacteria 545
325 Ga0395899_0023052 3300037312 Bacteria 4717
326 Ga0395899_0048524 3300037312 Bacteria 3159
327 Ga0395899_0080114 3300037312 Bacteria 2377
328 Ga0395899_0127488 3300037312 Bacteria 1819
329 Ga0395899_0131682 3300037312 Bacteria 1785
330 Ga0395899_0171542 3300037312 Bacteria 1527
331 Ga0395900_0001997 3300037418 Bacteria 23048
332 Ga0395900_0049917 3300037418 Bacteria 4310
333 Ga0395900_0087709 3300037418 Bacteria 3197
334 Ga0395900_0169339 3300037418 Bacteria 2224
335 Ga0395900_0313730 3300037418 Bacteria 1550
336 Ga0395900_0578096 3300037418 Bacteria 1065
337 Ga0395900_0947240 3300037418 Bacteria 782
338 Ga0395898_0064162 3300037466 Bacteria 3562
339 Ga0395898_0155878 3300037466 Bacteria 2184
340 Ga0395898_0285777 3300037466 Bacteria 1573
341 Ga0395898_0297569 3300037466 Bacteria 1539
342 Ga0395898_0858956 3300037466 Bacteria 846
343 Ga0395905_0001037 3300037471 Bacteria 35267
344 Ga0395905_0019006 3300037471 Bacteria 6515
345 Ga0395905_0118562 3300037471 Bacteria 2487
346 Ga0395905_0155663 3300037471 Bacteria 2149
347 Ga0395905_0203768 3300037471 Bacteria 1854
348 Ga0395905_0212424 3300037471 Bacteria 1812
349 Ga0395905_0287683 3300037471 Bacteria 1530
350 Ga0395905_0353567 3300037471 Bacteria 1361
351 Ga0395905_0526491 3300037471 Bacteria 1082
352 Ga0395905_0605313 3300037471 Bacteria 998
353 Ga0395901_0000463 3300038443 Bacteria 47092
354 Ga0395901_0001476 3300038443 Bacteria 24466
355 Ga0395901_0010492 3300038443 Bacteria 9383
356 Ga0395901_0027712 3300038443 Bacteria 5824
357 Ga0395901_0106097 3300038443 Bacteria 2948
358 Ga0395901_0118744 3300038443 Bacteria 2778
359 Ga0395901_0232917 3300038443 Bacteria 1922
360 Ga0395901_0254603 3300038443 Bacteria 1828
361 Ga0436363_1141608 3300039450 Bacteria 1810
362 Ga0439465_0042873 3300041413 Bacteria 1467
363 Ga0439465_0174839 3300041413 Bacteria 775
364 Ga0439460_0095949 3300042461 Bacteria 947
365 Ga0466965_0402289 3300044683 Bacteria 757
366 Ga0466966_0268572 3300044684 Bacteria 1026
367 Ga0466961_0094867 3300044693 Bacteria 1882
368 Ga0466963_0032911 3300044694 Bacteria 3361
369 Ga0466971_0057315 3300044719 Bacteria 1757
370 Ga0466970_0056565 3300044765 Bacteria 2096
371 Ga0466970_0058672 3300044765 Bacteria 2060
372 Ga0466960_0147077 3300044901 Bacteria 1256
373 Ga0466959_0021670 3300045049 Bacteria 4743
374 Ga0466967_0052313 3300045976 Bacteria 3584
375 Ga0466967_0117247 3300045976 Bacteria 2454
376 Ga0466967_0194767 3300045976 Bacteria 1917
377 Ga0466967_0273309 3300045976 Bacteria 1620
378 Ga0466967_0655986 3300045976 Bacteria 1038
379 Ga0466967_0673738 3300045976 Bacteria 1024
380 Ga0466967_0958856 3300045976 Bacteria 851
381 Ga0466967_0971466 3300045976 Bacteria 845
382 Ga0495596_0067148 3300046500 Bacteria 1394
383 Ga0495663_0007977 3300046525 Bacteria 2927
384 Ga0495663_0162189 3300046525 Bacteria 767
385 Ga0495598_0019260 3300046537 Bacteria 1787
386 Ga0495598_0108816 3300046537 Bacteria 926
387 Ga0495621_0001714 3300046539 Bacteria 5745
388 Ga0495621_0016024 3300046539 Bacteria 2398
389 Ga0495633_0025903 3300046558 Bacteria 2884
390 Ga0495633_0071746 3300046558 Bacteria 1615
391 Ga0495668_0073930 3300046616 Bacteria 1872
392 Ga0495659_0363980 3300046664 Bacteria 620
393 Ga0495659_0387142 3300046664 Bacteria 602
394 Ga0495669_0006619 3300046684 Bacteria 4848
395 Ga0495669_0053578 3300046684 Bacteria 1814
396 Ga0495670_0039882 3300046691 Bacteria 2342
397 Ga0495670_0044861 3300046691 Bacteria 2207
398 Ga0495670_0214134 3300046691 Bacteria 1022
399 Ga0495636_0159717 3300047318 Bacteria 1015
400 Ga0495636_0373605 3300047318 Bacteria 676
401 Ga0495677_0051515 3300047445 Bacteria 1516
402 Ga0495677_0107117 3300047445 Bacteria 1061
403 Ga0495615_0041491 3300048090 Bacteria 1150
404 Ga0496101_0068263 3300048904 Bacteria 2599
405 Ga0496107_0013031 3300048910 Bacteria 5808
406 Ga0496109_0033930 3300048912 Bacteria 4593
407 Ga0496109_0071802 3300048912 Bacteria 3179
408 Ga0496109_1171032 3300048912 Bacteria 705
409 Ga0496110_0001568 3300048913 Bacteria 16665
410 Ga0496111_0013364 3300048914 Bacteria 5584
411 Ga0496114_0008710 3300048917 Bacteria 8039
412 Ga0496114_0745226 3300048917 Bacteria 857
413 Ga0501235_042564 3300049669 Bacteria 1041
414 Ga0501239_061467 3300049672 Bacteria 566
415 Ga0501221_013473 3300049704 Bacteria 1504
416 nmdc:mga06r32_12372_c2 3300050510 Bacteria 7343
417 2585262002 2582581305 Bacteria 4895574
418 Ga0157373_10092674
419 MBSR1b_contig_11806715
420 JGI24739J22299_10094229
421 JGI24737J22298_10005335
422 JGI24737J22298_10009400
423 JGI24034J26672_10016521
424 JGI24751J29686_10066665
425 rootL2_10261143
426 rootH1_10060436
427 Ga0065712_10068318
428 Ga0065712_10120737
429 Ga0065715_10097614
430 Ga0065715_10207960
431 Ga0070658_10042084
432 Ga0070658_10534996
433 Ga0070658_10732713
434 Ga0070658_10959773
435 Ga0070658_11017082
436 Ga0070676_10094585
437 Ga0070676_10868055
438 Ga0070683_100424797
439 Ga0070683_100714892
440 Ga0070670_100001001
441 Ga0070670_100001868
442 Ga0070670_100002224
443 Ga0070670_100133349
444 Ga0070670_100266659
445 Ga0070677_10034897
446 Ga0070666_10015266
447 Ga0070682_100165658
448 Ga0070660_100171908
449 Ga0070660_100244535
450 Ga0070661_100068571
451 Ga0070692_10045519
452 Ga0070669_100198097
453 Ga0070669_100563931
454 Ga0070669_101064555
455 Ga0070675_100001926
456 Ga0070675_100024953
457 Ga0070675_100439060
458 Ga0070675_101036848
459 Ga0070671_100000446
460 Ga0070671_100012323
461 Ga0070671_100012774
462 Ga0070674_100296582
463 Ga0070673_100009788
464 Ga0070673_100488744
465 Ga0070673_100972435
466 Ga0070659_100003111
467 Ga0070659_100041924
468 Ga0070659_100582531
469 Ga0070667_100040341
470 Ga0070663_100137133
471 Ga0070663_100442934
472 Ga0070678_100310696
473 Ga0070678_101091992
474 Ga0070662_100176014
475 Ga0070662_100254456
476 Ga0070662_100423807
477 Ga0070662_100504884
478 Ga0070681_10037282
479 Ga0070681_10195325
480 Ga0068867_100768484
481 Ga0070679_100049871
482 Ga0070679_100624416
483 Ga0070684_100515916
484 Ga0068853_100067088
485 Ga0068853_100108026
486 Ga0070672_100001499
487 Ga0070672_100069476
488 Ga0070672_100175538
489 Ga0070693_100052881
490 Ga0070665_100066161
491 Ga0070665_100701370
492 Ga0068855_100614269
493 Ga0070664_100439246
494 Ga0070664_100524281
495 Ga0068854_100498655
496 Ga0068854_101095450
497 Ga0068856_100086343
498 Ga0068856_101442241
499 Ga0068856_102389363
500 Ga0068852_100155199
501 Ga0068852_100721808
502 Ga0068852_100829632
503 Ga0068864_100035408
504 Ga0068864_100065701
505 Ga0068864_100283103
506 Ga0068861_100331225
507 Ga0068870_10959577
508 Ga0068863_100499127
509 Ga0068862_101319228
510 Ga0097621_100314746
511 Ga0068871_100899590
512 Ga0068871_101403334
513 Ga0075431_100017848
514 Ga0068865_101065371
515 Ga0105248_10003593
516 Ga0105248_10050579
517 Ga0157373_10026335
518 Ga0157373_10341094
519 Ga0157371_10024276
520 Ga0157371_10026742
521 Ga0157371_10205623
522 Ga0157371_10440299
523 Ga0157369_10112120
524 Ga0163162_10163947
525 Ga0157372_10375118
526 Ga0157372_10427370
527 Ga0157375_10015694
528 Ga0157375_10022779
529 Ga0163163_10050026
530 Ga0163163_10066315
531 Ga0157380_10004104
532 Ga0157380_10067565
533 Ga0157380_10629046
534 Ga0157379_11652218
535 Ga0163161_10007608
536 Ga0163161_10233939
537 Ga0163161_10290837
538 Ga0207697_10037712
539 Ga0207688_10047213
540 Ga0207647_10006147
541 Ga0207647_10055793
542 Ga0207645_10831899
543 Ga0207705_10000931
544 Ga0207705_10003070
545 Ga0207705_10021084
546 Ga0207705_10152268
547 Ga0207705_10414984
548 Ga0207705_10636258
549 Ga0207705_10896103
550 Ga0207705_10994775
551 Ga0207707_10139491
552 Ga0207707_10466741
553 Ga0207660_10060117
554 Ga0207657_10002684
555 Ga0207657_10003904
556 Ga0207657_10006647
557 Ga0207657_10078946
558 Ga0207649_10152311
559 Ga0207681_10062680
560 Ga0207681_10373693
561 Ga0207681_10535109
562 Ga0207650_10000583
563 Ga0207650_10005175
564 Ga0207650_10048051
565 Ga0207650_10105753
566 Ga0207650_10202615
567 Ga0207659_10001196
568 Ga0207659_10384741
569 Ga0207644_10030441
570 Ga0207644_10046872
571 Ga0207690_10011101
572 Ga0207690_10028561
573 Ga0207690_10525380
574 Ga0207690_11069032
575 Ga0207706_10056758
576 Ga0207706_10061968
577 Ga0207706_10255519
578 Ga0207706_10331170
579 Ga0207706_10560156
580 Ga0207704_10338551
581 Ga0207704_10411425
582 Ga0207691_10003881
583 Ga0207691_10083718
584 Ga0207691_10122394
585 Ga0207711_10006336
586 Ga0207711_10070151
587 Ga0207661_10604776
588 Ga0207661_10721389
589 Ga0207661_11044248
590 Ga0207679_10010208
591 Ga0207679_10179621
592 Ga0207679_11074322
593 Ga0207651_10143911
594 Ga0207651_10832626
595 Ga0207640_10240429
596 Ga0207640_10759466
597 Ga0207658_10012450
598 Ga0207639_10038692
599 Ga0207639_10159700
600 Ga0207678_10046800
601 Ga0207678_10123878
602 Ga0207678_10159468
603 Ga0207678_10265640
604 Ga0207678_10598799
605 Ga0207678_10776834
606 Ga0207678_11552860
607 Ga0207708_11167379
608 Ga0207676_10076790
609 Ga0207676_10240672
610 Ga0207674_10002230
611 Ga0207675_100378551
612 Ga0207675_101117787
613 Ga0207683_10664380
614 Ga0207683_11076955
615 Ga0207698_10128720
616 Ga0207698_10219350
617 Ga0209983_1025118
618 Ga0268266_10015830
619 Ga0268266_10325773
620 Ga0307408_100008022
621 Ga0307408_100010478
622 Ga0307408_100083598
623 Ga0307408_100180785
624 Ga0307408_100476954
625 Ga0307408_100755246
626 Ga0307408_100907996
627 Ga0307405_10024786
628 Ga0307405_10037640
629 Ga0307405_10090241
630 Ga0307405_10287713
631 Ga0307405_10336513
632 Ga0307405_10417797
633 Ga0307405_10548668
634 Ga0307413_10002137
635 Ga0307413_10005218
636 Ga0307413_10017627
637 Ga0307413_10054186
638 Ga0307413_10066789
639 Ga0307413_10076516
640 Ga0307413_10104638
641 Ga0307413_10208387
642 Ga0307413_10224546
643 Ga0307413_10317429
644 Ga0307413_10398482
645 Ga0307413_10478073
646 Ga0307413_11513650
647 Ga0307413_11616600
648 Ga0307410_10006291
649 Ga0307410_10009618
650 Ga0307410_10091980
651 Ga0307410_10145399
652 Ga0307410_10304956
653 Ga0307410_10306175
654 Ga0307410_10322315
655 Ga0307410_10334272
656 Ga0307410_10593108
657 Ga0307410_10792499
658 Ga0307410_11289384
659 Ga0307406_10034618
660 Ga0307406_10051143
661 Ga0307406_10118085
662 Ga0307406_10337877
663 Ga0307406_10451738
664 Ga0307406_10486731
665 Ga0307406_10522188
666 Ga0307407_10039172
667 Ga0307407_10053373
668 Ga0307407_10095302
669 Ga0307407_10135813
670 Ga0307407_10148413
671 Ga0307407_10202993
672 Ga0307407_10241333
673 Ga0307407_10276164
674 Ga0307407_10585675
675 Ga0307407_10591635
676 Ga0307407_10639057
677 Ga0307412_10004315
678 Ga0307412_10013789
679 Ga0307412_10029139
680 Ga0307412_10045123
681 Ga0307412_10054824
682 Ga0307412_10065929
683 Ga0307412_10319155
684 Ga0307412_10466286
685 Ga0307412_10621738
686 Ga0307409_100010448
687 Ga0307409_100028685
688 Ga0307409_100078484
689 Ga0307409_100086905
690 Ga0307409_100116131
691 Ga0307409_100126000
692 Ga0307409_100137527
693 Ga0307409_100235586
694 Ga0307409_100276558
695 Ga0307409_100428032
696 Ga0307409_100964045
697 Ga0307416_100006587
698 Ga0307416_100041688
699 Ga0307416_100063727
700 Ga0307416_100065183
701 Ga0307416_100076949
702 Ga0307416_100224319
703 Ga0307416_100589654
704 Ga0307416_100834828
705 Ga0307416_100997681
706 Ga0307414_10009022
707 Ga0307414_10020621
708 Ga0307414_10022445
709 Ga0307414_10052600
710 Ga0307414_10055481
711 Ga0307414_10067829
712 Ga0307414_10210602
713 Ga0307414_10267071
714 Ga0307414_10542599
715 Ga0307414_10548679
716 Ga0307414_10770074
717 Ga0307414_10781913
718 Ga0307414_10964388
719 Ga0307414_11041399
720 Ga0307414_11073169
721 Ga0307414_11231805
722 Ga0307411_10011140
723 Ga0307411_10030651
724 Ga0307411_10044363
725 Ga0307411_10089991
726 Ga0307411_10115967
727 Ga0307411_10118762
728 Ga0307411_10190014
729 Ga0307411_10198812
730 Ga0307411_10225910
731 Ga0307411_10267042
732 Ga0307411_10289938
733 Ga0307411_10553274
734 Ga0307411_10680145
735 Ga0307411_11479618
736 Ga0307415_100028476
737 Ga0307415_100104804
738 Ga0307415_100108043
739 Ga0307415_100284959
740 Ga0307415_100631494
741 Ga0307415_102149917
742 Ga0395899_0023052
743 Ga0395899_0048524
744 Ga0395899_0080114
745 Ga0395899_0127488
746 Ga0395899_0131682
747 Ga0395899_0171542
748 Ga0395900_0001997
749 Ga0395900_0049917
750 Ga0395900_0087709
751 Ga0395900_0169339
752 Ga0395900_0313730
753 Ga0395900_0578096
754 Ga0395900_0947240
755 Ga0395898_0064162
756 Ga0395898_0155878
757 Ga0395898_0285777
758 Ga0395898_0297569
759 Ga0395898_0858956
760 Ga0395905_0001037
761 Ga0395905_0019006
762 Ga0395905_0118562
763 Ga0395905_0155663
764 Ga0395905_0203768
765 Ga0395905_0212424
766 Ga0395905_0287683
767 Ga0395905_0353567
768 Ga0395905_0526491
769 Ga0395905_0605313
770 Ga0395901_0000463
771 Ga0395901_0001476
772 Ga0395901_0010492
773 Ga0395901_0027712
774 Ga0395901_0106097
775 Ga0395901_0118744
776 Ga0395901_0232917
777 Ga0395901_0254603
778 Ga0436363_1141608
779 Ga0439465_0042873
780 Ga0439465_0174839
781 Ga0439460_0095949
782 Ga0466965_0402289
783 Ga0466966_0268572
784 Ga0466961_0094867
785 Ga0466963_0032911
786 Ga0466971_0057315
787 Ga0466970_0056565
788 Ga0466970_0058672
789 Ga0466960_0147077
790 Ga0466959_0021670
791 Ga0466967_0052313
792 Ga0466967_0117247
793 Ga0466967_0194767
794 Ga0466967_0273309
795 Ga0466967_0655986
796 Ga0466967_0673738
797 Ga0466967_0958856
798 Ga0466967_0971466
799 Ga0495596_0067148
800 Ga0495663_0007977
801 Ga0495663_0162189
802 Ga0495598_0019260
803 Ga0495598_0108816
804 Ga0495621_0001714
805 Ga0495621_0016024
806 Ga0495633_0025903
807 Ga0495633_0071746
808 Ga0495668_0073930
809 Ga0495659_0363980
810 Ga0495659_0387142
811 Ga0495669_0006619
812 Ga0495669_0053578
813 Ga0495670_0039882
814 Ga0495670_0044861
815 Ga0495670_0214134
816 Ga0495636_0159717
817 Ga0495636_0373605
818 Ga0495677_0051515
819 Ga0495677_0107117
820 Ga0495615_0041491
821 Ga0496101_0068263
822 Ga0496107_0013031
823 Ga0496109_0033930
824 Ga0496109_0071802
825 Ga0496109_1171032
826 Ga0496110_0001568
827 Ga0496111_0013364
828 Ga0496114_0008710
829 Ga0496114_0745226
830 Ga0501235_042564
831 Ga0501239_061467
832 Ga0501221_013473
833 nmdc:mga06r32_12372_c2
834 2585262002

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03449

GreA_GreB_N

Transcription elongation factor, N-terminal

7

77

0.98

PF01272

GreA_GreB

Transcription elongation factor, GreA/GreB, C-term

83

159

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rin-assembly1.cif.gz_F cryo-em structure of e. coli rna polymerase backtracked elongation complex bound to greb transcription factor 0.9006 2 159
6rin-assembly1.cif.gz_F cryo-em structure of e. coli rna polymerase backtracked elongation complex bound to greb transcription factor 0.8952 2 159
1grj-assembly1.cif.gz_A grea transcript cleavage factor from escherichia coli 0.8889 4 159
1grj-assembly1.cif.gz_A grea transcript cleavage factor from escherichia coli 0.8834 4 159
4wqt-assembly3.cif.gz_Z thermus thermophilus rna polymerase complexed with an rna cleavage stimulating factor (a grea/gfh1 chimeric protein) 0.8336 4 157
ID Description Score Start End Superfamily
af_Q2FXW7_79_158_3.10.50.30 Alpha Beta;Roll;Chitinase A; domain 3;Transcription elongation factor, GreA/GreB, C-terminal domain 0.9475 82 157 3.10.50.30
af_Q2FXW7_79_158_3.10.50.30 Alpha Beta;Roll;Chitinase A; domain 3;Transcription elongation factor, GreA/GreB, C-terminal domain 0.8911 82 157 3.10.50.30
1grjA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.8887 4 77 1.10.287.180
2p4vB02 Alpha Beta;Roll;Chitinase A; domain 3;Transcription elongation factor, GreA/GreB, C-terminal domain 0.8874 80 159 3.10.50.30
2eulB02 Alpha Beta;Roll;Chitinase A; domain 3;Transcription elongation factor, GreA/GreB, C-terminal domain 0.8845 83 152 3.10.50.30
ID Description Score Start End GO Terms
AF-A0A3C1WF27-F1-model_v4 Transcription elongation factor GreA 0.9906 89 159 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A6L8Q7V6-F1-model_v4 GreA/GreB family elongation factor 0.9833 86 157 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A7V8KLB0-F1-model_v4 deleted 0.9734 90 159
AF-A0A3N5MQV1-F1-model_v4 Transcription elongation factor GreA 0.9728 91 159 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A1F7Z2X8-F1-model_v4 Transcription elongation factor GreA/GreB C-terminal domain-containing protein 0.9683 87 157 GO:0003677
GO:0032784

Map