F429418

General Info

Members Datasets Scaffolds Average Seq Length
382 185 764 269

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0206340|Ga0501047_0206340_365_1297
Length 310
Sequence VLRLIRDGPSMVRTNTVFSTPCWAMIADRFEPAGFTMGGKAGKLWVVATPIGNLGDLSPRAQQVLHDADVIAAEDTRHSRPLLQHFSIATPLTALHEHNERAAVASLIAKLQAGENVALISDAGTPLISDPGFRLVRAAREAGVDVVPVPGACAAIAALSVAGLPSDRFVFEGFLPAKASARRERLHELANEARTLVIYESSHRIVECCADLRDAFGTQREARLLRELTKLHETCIGMTLGDIAERVANDPEQRLGECVLVVAGRGEEADAKLAEGRRVYALLRAELAPAQAAKLAAAISGAPRKDLYGG

Samples

Sample ID Description Type Environment
1 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001978 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
75 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
77 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
122 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
123 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
124 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
125 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
126 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
127 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
128 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
131 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
132 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
133 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
134 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
135 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
136 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
137 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
138 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
139 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
140 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
141 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
142 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
143 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
144 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
145 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
146 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
147 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
148 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
149 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
150 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
151 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
152 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
153 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
154 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
155 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
156 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
170 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
176 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
182 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
183 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
184 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified
185 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.86
Metatranscriptomes 2.62
Isolates 0.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.4
Nodule 0
Rhizoplane 0.79
Rhizosphere 92.93
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501047_0206340 3300049581 Bacteria 1824
2 JGI24736J21556_1001299 3300001904 Bacteria 4576
3 JGI24747J21853_1002293 3300001978 Bacteria 1543
4 JGI24740J21852_10002978 3300001979 Bacteria 7501
5 JGI24740J21852_10029623 3300001979 Bacteria 1795
6 JGI24735J21928_10013231 3300002067 Bacteria 2598
7 JGI24735J21928_10044711 3300002067 Bacteria 1287
8 JGI24744J21845_10000428 3300002077 Bacteria 7386
9 JGI25151J46595_10007947 3300003187 Bacteria 5143
10 JGI25151J46595_10035947 3300003187 Bacteria 1874
11 rootL2_10081310 3300003322 Bacteria 3473
12 Ga0055536_1013278 3300003781 Bacteria 2987
13 Ga0055531_10043110 3300003794 Bacteria 1281
14 Ga0070658_10033643 3300005327 Bacteria 4124
15 Ga0070658_10073505 3300005327 Bacteria 2803
16 Ga0070683_100027293 3300005329 Bacteria 5148
17 Ga0070670_100094229 3300005331 Bacteria 2575
18 Ga0070677_10020546 3300005333 Bacteria 2407
19 Ga0070680_100003756 3300005336 Bacteria 11345
20 Ga0070680_100021275 3300005336 Bacteria 5154
21 Ga0070680_100035712 3300005336 Bacteria 4013
22 Ga0070680_100065641 3300005336 Bacteria 2974
23 Ga0070680_100315168 3300005336 Bacteria 1328
24 Ga0070682_100062855 3300005337 Bacteria 2352
25 Ga0070682_100217609 3300005337 Bacteria 1357
26 Ga0070660_100032568 3300005339 Bacteria 3923
27 Ga0070660_100065512 3300005339 Bacteria 2827
28 Ga0070660_100127080 3300005339 Bacteria 2037
29 Ga0070660_100287768 3300005339 Bacteria 1345
30 Ga0070660_100512441 3300005339 Bacteria 998
31 Ga0070691_10000950 3300005341 Bacteria 11799
32 Ga0070661_100008999 3300005344 Bacteria 6909
33 Ga0070661_100016739 3300005344 Bacteria 5190
34 Ga0070661_100072390 3300005344 Bacteria 2536
35 Ga0070661_100112888 3300005344 Bacteria 2030
36 Ga0070661_100371060 3300005344 Bacteria 1126
37 Ga0070692_10006218 3300005345 Bacteria 5168
38 Ga0070692_10010111 3300005345 Bacteria 4281
39 Ga0070692_10151384 3300005345 Bacteria 1321
40 Ga0070668_100179547 3300005347 Bacteria 1728
41 Ga0070671_100001635 3300005355 Bacteria 16920
42 Ga0070671_100299774 3300005355 Bacteria 1368
43 Ga0070674_100036414 3300005356 Bacteria 3303
44 Ga0070673_100115696 3300005364 Bacteria 2230
45 Ga0070659_100022031 3300005366 Bacteria 4862
46 Ga0070659_100061371 3300005366 Bacteria 2971
47 Ga0070659_100077642 3300005366 Bacteria 2649
48 Ga0070703_10092972 3300005406 Bacteria 1049
49 Ga0070714_100147861 3300005435 Bacteria 2115
50 Ga0070713_100090549 3300005436 Bacteria 2630
51 Ga0070663_100003400 3300005455 Bacteria 9191
52 Ga0070663_100160762 3300005455 Bacteria 1729
53 Ga0070678_100031929 3300005456 Bacteria 3639
54 Ga0070662_100025559 3300005457 Bacteria 4079
55 Ga0070662_100182943 3300005457 Bacteria 1653
56 Ga0070681_10014393 3300005458 Bacteria 7873
57 Ga0070681_10113122 3300005458 Bacteria 2654
58 Ga0070681_10183599 3300005458 Bacteria 2013
59 Ga0068867_100045205 3300005459 Bacteria 3228
60 Ga0070679_100003263 3300005530 Bacteria 14827
61 Ga0070679_100022097 3300005530 Bacteria 6215
62 Ga0070679_100095034 3300005530 Bacteria 2968
63 Ga0070679_100163029 3300005530 Bacteria 2203
64 Ga0070684_100028427 3300005535 Bacteria 4730
65 Ga0068853_100054229 3300005539 Bacteria 3455
66 Ga0068853_100115588 3300005539 Bacteria 2388
67 Ga0068853_100207488 3300005539 Bacteria 1785
68 Ga0068853_100351377 3300005539 Bacteria 1371
69 Ga0068853_100375599 3300005539 Bacteria 1327
70 Ga0070672_100012473 3300005543 Bacteria 5969
71 Ga0070696_100026819 3300005546 Bacteria 3921
72 Ga0070696_100030630 3300005546 Bacteria 3685
73 Ga0070696_100089549 3300005546 Bacteria 2188
74 Ga0070696_100118574 3300005546 Bacteria 1913
75 Ga0070693_100006002 3300005547 Bacteria 5874
76 Ga0070665_100056160 3300005548 Bacteria 3948
77 Ga0068855_100005000 3300005563 Bacteria 16175
78 Ga0068855_100068424 3300005563 Bacteria 4134
79 Ga0070664_100006860 3300005564 Bacteria 9185
80 Ga0070664_100233954 3300005564 Bacteria 1648
81 Ga0068857_100284541 3300005577 Bacteria 1521
82 Ga0068854_100004273 3300005578 Bacteria 9000
83 Ga0068854_100013401 3300005578 Bacteria 5380
84 Ga0068854_100284989 3300005578 Bacteria 1331
85 Ga0068856_100124347 3300005614 Bacteria 2582
86 Ga0068856_100374222 3300005614 Bacteria 1443
87 Ga0068856_100746791 3300005614 Bacteria 998
88 Ga0068852_100006182 3300005616 Bacteria 8634
89 Ga0068852_100025747 3300005616 Bacteria 4771
90 Ga0068852_100025770 3300005616 Bacteria 4769
91 Ga0068852_100047865 3300005616 Bacteria 3651
92 Ga0068852_100068336 3300005616 Bacteria 3109
93 Ga0068852_100341071 3300005616 Bacteria 1460
94 Ga0068859_100348443 3300005617 Bacteria 1576
95 Ga0068851_10002906 3300005834 Bacteria 7568
96 Ga0068851_10027635 3300005834 Bacteria 2797
97 Ga0068851_10029896 3300005834 Bacteria 2699
98 Ga0068851_10044897 3300005834 Bacteria 2232
99 Ga0068860_100062901 3300005843 Bacteria 3526
100 Ga0081455_10002875 3300005937 Bacteria 20264
101 Ga0070716_100022752 3300006173 Bacteria 3315
102 Ga0097621_100088702 3300006237 Bacteria 2585
103 Ga0075431_100368470 3300006847 Bacteria 1442
104 Ga0068865_100015703 3300006881 Bacteria 4831
105 Ga0068865_100089854 3300006881 Bacteria 2226
106 Ga0097620_100348447 3300006931 Bacteria 1576
107 Ga0105240_10071725 3300009093 Bacteria 4283
108 Ga0105240_10111620 3300009093 Bacteria 3307
109 Ga0105240_10526708 3300009093 Bacteria 1311
110 Ga0105240_10736136 3300009093 Bacteria 1073
111 Ga0105245_10007531 3300009098 Bacteria 9538
112 Ga0105245_10279315 3300009098 Bacteria 1632
113 Ga0105241_10136666 3300009174 Bacteria 1991
114 Ga0105241_10172508 3300009174 Bacteria 1787
115 Ga0105242_10022850 3300009176 Bacteria 4924
116 Ga0105242_10569242 3300009176 Bacteria 1089
117 Ga0105238_10017053 3300009551 Bacteria 7372
118 Ga0105238_10069470 3300009551 Bacteria 3523
119 Ga0105246_10017231 3300011119 Bacteria 4591
120 Ga0157373_10008670 3300013100 Bacteria 7544
121 Ga0157373_10017085 3300013100 Bacteria 5284
122 Ga0157373_10058920 3300013100 Bacteria 2721
123 Ga0157371_10053432 3300013102 Bacteria 2869
124 Ga0157371_10228661 3300013102 Bacteria 1337
125 Ga0157371_10255439 3300013102 Bacteria 1263
126 Ga0157371_10326779 3300013102 Bacteria 1114
127 Ga0157370_10038713 3300013104 Bacteria 4611
128 Ga0157370_10060770 3300013104 Bacteria 3586
129 Ga0157370_10279646 3300013104 Bacteria 1542
130 Ga0157369_10002370 3300013105 Bacteria 22641
131 Ga0157369_10024776 3300013105 Bacteria 6666
132 Ga0157369_10046913 3300013105 Bacteria 4693
133 Ga0157369_10215556 3300013105 Bacteria 2011
134 Ga0157369_10418448 3300013105 Bacteria 1389
135 Ga0157369_10673068 3300013105 Bacteria 1066
136 Ga0157372_10005981 3300013307 Bacteria 12928
137 Ga0157372_10038566 3300013307 Bacteria 5273
138 Ga0157372_10075613 3300013307 Bacteria 3800
139 Ga0157372_10091814 3300013307 Bacteria 3453
140 Ga0157380_10245473 3300014326 Bacteria 1617
141 Ga0157379_10590789 3300014968 Bacteria 1036
142 Ga0157376_10061553 3300014969 Bacteria 3156
143 Ga0197907_10797091 3300020069 Bacteria 5830
144 Ga0197907_10914434 3300020069 Bacteria 3261
145 Ga0206356_10054440 3300020070 Bacteria 7593
146 Ga0206356_10332500 3300020070 Bacteria 1402
147 Ga0206356_11399675 3300020070 Bacteria 1321
148 Ga0206356_11540754 3300020070 Bacteria 6445
149 Ga0206354_10523033 3300020081 Bacteria 1249
150 Ga0206354_10611992 3300020081 Bacteria 4380
151 Ga0206354_10627850 3300020081 Bacteria 1406
152 Ga0206353_10016367 3300020082 Bacteria 3594
153 Ga0213875_10027427 3300021388 Bacteria 2709
154 Ga0209676_1003095 3300025292 Bacteria 10708
155 Ga0209676_1003992 3300025292 Bacteria 8519
156 Ga0209025_1001895 3300025294 Bacteria 24398
157 Ga0209564_1025670 3300025295 Bacteria 1973
158 Ga0209050_1001688 3300025298 Bacteria 22135
159 Ga0209256_1005277 3300025299 Bacteria 7535
160 Ga0209051_1002391 3300025303 Bacteria 13542
161 Ga0207682_10007233 3300025893 Bacteria 4437
162 Ga0207680_10083489 3300025903 Bacteria 2013
163 Ga0207647_10002208 3300025904 Bacteria 14832
164 Ga0207647_10018683 3300025904 Bacteria 4681
165 Ga0207647_10160252 3300025904 Bacteria 1313
166 Ga0207705_10000087 3300025909 Bacteria 114441
167 Ga0207705_10000153 3300025909 Bacteria 74093
168 Ga0207705_10000560 3300025909 Bacteria 31207
169 Ga0207705_10006119 3300025909 Bacteria 8954
170 Ga0207705_10043508 3300025909 Bacteria 3227
171 Ga0207705_10161570 3300025909 Bacteria 1683
172 Ga0207705_10166716 3300025909 Bacteria 1657
173 Ga0207705_10176601 3300025909 Bacteria 1610
174 Ga0207654_10113234 3300025911 Bacteria 1691
175 Ga0207707_10001030 3300025912 Bacteria 26758
176 Ga0207707_10001039 3300025912 Bacteria 26597
177 Ga0207707_10006315 3300025912 Bacteria 10349
178 Ga0207707_10012705 3300025912 Bacteria 7318
179 Ga0207707_10035028 3300025912 Bacteria 4390
180 Ga0207707_10039718 3300025912 Bacteria 4113
181 Ga0207707_10157757 3300025912 Bacteria 1984
182 Ga0207695_10000859 3300025913 Bacteria 55564
183 Ga0207695_10001326 3300025913 Bacteria 41988
184 Ga0207695_10041151 3300025913 Bacteria 4946
185 Ga0207695_10098768 3300025913 Bacteria 2918
186 Ga0207695_10136644 3300025913 Bacteria 2404
187 Ga0207671_10167035 3300025914 Bacteria 1707
188 Ga0207660_10003444 3300025917 Bacteria 10324
189 Ga0207660_10003556 3300025917 Bacteria 10146
190 Ga0207660_10164382 3300025917 Bacteria 1714
191 Ga0207660_10185376 3300025917 Bacteria 1618
192 Ga0207660_10241449 3300025917 Bacteria 1423
193 Ga0207662_10214116 3300025918 Bacteria 1252
194 Ga0207657_10000763 3300025919 Bacteria 34137
195 Ga0207657_10002836 3300025919 Bacteria 18613
196 Ga0207657_10003990 3300025919 Bacteria 15688
197 Ga0207657_10006705 3300025919 Bacteria 11900
198 Ga0207657_10008124 3300025919 Bacteria 10701
199 Ga0207657_10025402 3300025919 Bacteria 5464
200 Ga0207649_10001447 3300025920 Bacteria 13976
201 Ga0207649_10010230 3300025920 Bacteria 5149
202 Ga0207649_10045472 3300025920 Bacteria 2692
203 Ga0207649_10085159 3300025920 Bacteria 2056
204 Ga0207649_10124671 3300025920 Bacteria 1741
205 Ga0207649_10197145 3300025920 Bacteria 1420
206 Ga0207652_10000017 3300025921 Bacteria 188391
207 Ga0207652_10000040 3300025921 Bacteria 131566
208 Ga0207652_10000418 3300025921 Bacteria 44135
209 Ga0207652_10000801 3300025921 Bacteria 30036
210 Ga0207652_10009844 3300025921 Bacteria 7693
211 Ga0207652_10285155 3300025921 Bacteria 1490
212 Ga0207694_10017624 3300025924 Bacteria 5398
213 Ga0207687_10001315 3300025927 Bacteria 16983
214 Ga0207687_10213082 3300025927 Bacteria 1516
215 Ga0207644_10334891 3300025931 Bacteria 1226
216 Ga0207644_10354891 3300025931 Bacteria 1191
217 Ga0207690_10000494 3300025932 Bacteria 25468
218 Ga0207690_10000857 3300025932 Bacteria 19508
219 Ga0207690_10109812 3300025932 Bacteria 1984
220 Ga0207690_10200708 3300025932 Bacteria 1514
221 Ga0207690_10413751 3300025932 Bacteria 1077
222 Ga0207690_10423002 3300025932 Bacteria 1066
223 Ga0207706_10011550 3300025933 Bacteria 8042
224 Ga0207706_10088858 3300025933 Bacteria 2716
225 Ga0207686_10048002 3300025934 Bacteria 2642
226 Ga0207669_10145179 3300025937 Bacteria 1653
227 Ga0207704_10036618 3300025938 Bacteria 2825
228 Ga0207665_10170474 3300025939 Bacteria 1571
229 Ga0207691_10018849 3300025940 Bacteria 6536
230 Ga0207691_10022147 3300025940 Bacteria 5995
231 Ga0207689_10160000 3300025942 Bacteria 1856
232 Ga0207661_10005284 3300025944 Bacteria 9088
233 Ga0207661_10050906 3300025944 Bacteria 3302
234 Ga0207679_10007564 3300025945 Bacteria 6895
235 Ga0207679_10019553 3300025945 Bacteria 4552
236 Ga0207667_10000675 3300025949 Bacteria 44235
237 Ga0207667_10002419 3300025949 Bacteria 23393
238 Ga0207667_10002469 3300025949 Bacteria 23071
239 Ga0207667_10007504 3300025949 Bacteria 13091
240 Ga0207667_10010604 3300025949 Bacteria 10760
241 Ga0207651_10209592 3300025960 Bacteria 1567
242 Ga0207668_10057102 3300025972 Bacteria 2722
243 Ga0207640_10000495 3300025981 Bacteria 24008
244 Ga0207640_10001734 3300025981 Bacteria 11703
245 Ga0207640_10025876 3300025981 Bacteria 3558
246 Ga0207640_10027995 3300025981 Bacteria 3440
247 Ga0207640_10076572 3300025981 Bacteria 2271
248 Ga0207677_10086886 3300026023 Bacteria 2262
249 Ga0207639_10000429 3300026041 Bacteria 29070
250 Ga0207639_10001825 3300026041 Bacteria 14340
251 Ga0207639_10018071 3300026041 Bacteria 5005
252 Ga0207678_10002846 3300026067 Bacteria 15688
253 Ga0207678_10003458 3300026067 Bacteria 14217
254 Ga0207678_10008431 3300026067 Bacteria 9089
255 Ga0207678_10014039 3300026067 Bacteria 7044
256 Ga0207678_10035381 3300026067 Bacteria 4348
257 Ga0207678_10167347 3300026067 Bacteria 1877
258 Ga0207678_10288454 3300026067 Bacteria 1409
259 Ga0207708_10020714 3300026075 Bacteria 4959
260 Ga0207702_10011058 3300026078 Bacteria 7534
261 Ga0207702_10032065 3300026078 Bacteria 4383
262 Ga0207702_10069681 3300026078 Bacteria 3024
263 Ga0207648_10074094 3300026089 Bacteria 2967
264 Ga0207674_10002886 3300026116 Bacteria 21357
265 Ga0207674_10004194 3300026116 Bacteria 17396
266 Ga0207674_10026395 3300026116 Bacteria 6170
267 Ga0207683_10023790 3300026121 Bacteria 5270
268 Ga0207683_10025621 3300026121 Bacteria 5088
269 Ga0207698_10000491 3300026142 Bacteria 23071
270 Ga0207698_10000877 3300026142 Bacteria 17445
271 Ga0207698_10006712 3300026142 Bacteria 7191
272 Ga0207698_10137066 3300026142 Bacteria 2101
273 Ga0207698_10161030 3300026142 Bacteria 1962
274 Ga0207698_10325490 3300026142 Bacteria 1441
275 Ga0268264_10032310 3300028381 Bacteria 4294
276 Ga0307408_100149323 3300031548 Bacteria 1843
277 Ga0316575_10018895 3300031665 Bacteria 2631
278 Ga0316576_10001114 3300031727 Bacteria 14046
279 Ga0316576_10027035 3300031727 Bacteria 4031
280 Ga0316578_10023718 3300031728 Bacteria 3435
281 Ga0316578_10116625 3300031728 Bacteria 1604
282 Ga0307405_10093192 3300031731 Bacteria 2000
283 Ga0316577_10000644 3300031733 Bacteria 14535
284 Ga0307413_10001751 3300031824 Bacteria 8488
285 Ga0307413_10063154 3300031824 Bacteria 2295
286 Ga0307410_10000500 3300031852 Bacteria 15951
287 Ga0307410_10039222 3300031852 Bacteria 3108
288 Ga0307406_10007898 3300031901 Bacteria 5925
289 Ga0307412_10098308 3300031911 Bacteria 2064
290 Ga0307412_10303390 3300031911 Bacteria 1263
291 Ga0307409_100000732 3300031995 Bacteria 14712
292 Ga0307409_100022763 3300031995 Bacteria 4325
293 Ga0307416_100067781 3300032002 Bacteria 2945
294 Ga0307416_100098828 3300032002 Bacteria 2533
295 Ga0307416_100493229 3300032002 Bacteria 1287
296 Ga0307411_10000743 3300032005 Bacteria 12057
297 Ga0307411_10005352 3300032005 Bacteria 6291
298 Ga0307411_10402058 3300032005 Bacteria 1132
299 Ga0307415_100237375 3300032126 Bacteria 1472
300 Ga0316585_10020346 3300032137 Bacteria 2031
301 Ga0316580_10007458 3300032139 Bacteria 3260
302 Ga0316580_10007482 3300032139 Bacteria 3254
303 Ga0307507_10211748 3300033179 Bacteria 1320
304 Ga0316574_0012334 3300035398 Bacteria 4887
305 Ga0316582_0029387 3300036647 Bacteria 3339
306 Ga0316582_0380784 3300036647 Bacteria 971
307 Ga0316584_0020853 3300036712 Bacteria 4758
308 Ga0316584_0075757 3300036712 Bacteria 2521
309 Ga0395899_0030132 3300037312 Bacteria 4082
310 Ga0395899_0206845 3300037312 Bacteria 1365
311 Ga0395900_0008812 3300037418 Bacteria 10363
312 Ga0395900_0254059 3300037418 Bacteria 1758
313 Ga0395900_0333049 3300037418 Bacteria 1495
314 Ga0395900_0544388 3300037418 Bacteria 1106
315 Ga0395905_0004997 3300037471 Bacteria 13667
316 Ga0395905_0014535 3300037471 Bacteria 7511
317 Ga0395905_0042916 3300037471 Bacteria 4243
318 Ga0395905_0278218 3300037471 Bacteria 1559
319 Ga0436364_0443476 3300037853 Bacteria 4140
320 Ga0436364_0663509 3300037853 Bacteria 1632
321 Ga0395901_0034542 3300038443 Bacteria 5222
322 Ga0395901_0065795 3300038443 Bacteria 3775
323 Ga0395901_0381501 3300038443 Bacteria 1450
324 Ga0400483_080672 3300039062 Bacteria 9675
325 Ga0400483_153515 3300039062 Bacteria 9626
326 Ga0436360_0109393 3300039438 Bacteria 1578
327 Ga0436363_1222896 3300039450 Bacteria 4349
328 Ga0451843_1628459 3300041509 Bacteria 1028
329 Ga0439458_0001514 3300042157 Bacteria 5832
330 Ga0466966_0086662 3300044684 Bacteria 1947
331 Ga0466959_0020206 3300045049 Bacteria 4903
332 Ga0466958_0293956 3300045836 Bacteria 1042
333 Ga0466967_0182675 3300045976 Bacteria 1979
334 Ga0466967_0312529 3300045976 Bacteria 1514
335 Ga0466967_0595362 3300045976 Bacteria 1091
336 Ga0495606_0263607 3300046507 Bacteria 950
337 Ga0495616_0157160 3300046513 Bacteria 1025
338 Ga0496103_0075728 3300048906 Bacteria 2111
339 Ga0496107_0140198 3300048910 Bacteria 1787
340 Ga0496115_0002466 3300048918 Bacteria 13295
341 Ga0496118_0057111 3300048921 Bacteria 2929
342 Ga0501031_0156580 3300049568 Bacteria 1489
343 Ga0501032_0049015 3300049569 Bacteria 2851
344 Ga0501033_0041763 3300049570 Bacteria 3420
345 Ga0501033_0152001 3300049570 Bacteria 1670
346 Ga0501034_0307503 3300049571 Bacteria 1521
347 Ga0501037_0057505 3300049573 Bacteria 2839
348 Ga0501038_0340043 3300049574 Bacteria 1171
349 Ga0501043_0058262 3300049579 Bacteria 3032
350 Ga0501046_0062485 3300049580 Bacteria 2910
351 Ga0501046_0090123 3300049580 Bacteria 2360
352 Ga0501047_0009491 3300049581 Bacteria 9196
353 Ga0501047_0012103 3300049581 Bacteria 8166
354 Ga0501047_0280788 3300049581 Bacteria 1510
355 Ga0501067_0201432 3300049583 Bacteria 1109
356 Ga0501069_0000354 3300049585 Bacteria 20610
357 Ga0501069_0007349 3300049585 Bacteria 5781
358 Ga0501069_0139250 3300049585 Bacteria 1392
359 Ga0501070_0004257 3300049586 Bacteria 12303
360 Ga0501070_0127267 3300049586 Bacteria 2105
361 Ga0501072_0365262 3300049588 Bacteria 1146
362 Ga0501073_0004569 3300049589 Bacteria 10407
363 Ga0501073_0078036 3300049589 Bacteria 2304
364 Ga0501074_0003986 3300049590 Bacteria 10524
365 Ga0501074_0008081 3300049590 Bacteria 7622
366 Ga0501075_0321944 3300049591 Bacteria 1178
367 Ga0501079_0151714 3300049741 Bacteria 1806
368 Ga0501080_0003974 3300049742 Bacteria 13094
369 Ga0501080_0004446 3300049742 Bacteria 12474
370 Ga0501080_0044234 3300049742 Bacteria 4145
371 Ga0501080_0231414 3300049742 Bacteria 1689
372 Ga0501083_0092006 3300049744 Bacteria 2002
373 Ga0501035_0018090 3300049822 Bacteria 6494
374 Ga0501035_0091124 3300049822 Bacteria 2683
375 Ga0501044_0007113 3300049823 Bacteria 12307
376 Ga0501044_0008512 3300049823 Bacteria 11239
377 Ga0501044_0116103 3300049823 Bacteria 2682
378 Ga0495619_0341608 3300053085 Bacteria 1036
379 Ga0500627_0008605 3300053158 Bacteria 3636
380 Ga0500637_0057329 3300053178 Bacteria 2227
381 8048747317 8048746797 Bacteria 3557226
382 8055228574 8055225921 Bacteria 3341787
383 Ga0501047_0206340
384 JGI24736J21556_1001299
385 JGI24747J21853_1002293
386 JGI24740J21852_10002978
387 JGI24740J21852_10029623
388 JGI24735J21928_10013231
389 JGI24735J21928_10044711
390 JGI24744J21845_10000428
391 JGI25151J46595_10007947
392 JGI25151J46595_10035947
393 rootL2_10081310
394 Ga0055536_1013278
395 Ga0055531_10043110
396 Ga0070658_10033643
397 Ga0070658_10073505
398 Ga0070683_100027293
399 Ga0070670_100094229
400 Ga0070677_10020546
401 Ga0070680_100003756
402 Ga0070680_100021275
403 Ga0070680_100035712
404 Ga0070680_100065641
405 Ga0070680_100315168
406 Ga0070682_100062855
407 Ga0070682_100217609
408 Ga0070660_100032568
409 Ga0070660_100065512
410 Ga0070660_100127080
411 Ga0070660_100287768
412 Ga0070660_100512441
413 Ga0070691_10000950
414 Ga0070661_100008999
415 Ga0070661_100016739
416 Ga0070661_100072390
417 Ga0070661_100112888
418 Ga0070661_100371060
419 Ga0070692_10006218
420 Ga0070692_10010111
421 Ga0070692_10151384
422 Ga0070668_100179547
423 Ga0070671_100001635
424 Ga0070671_100299774
425 Ga0070674_100036414
426 Ga0070673_100115696
427 Ga0070659_100022031
428 Ga0070659_100061371
429 Ga0070659_100077642
430 Ga0070703_10092972
431 Ga0070714_100147861
432 Ga0070713_100090549
433 Ga0070663_100003400
434 Ga0070663_100160762
435 Ga0070678_100031929
436 Ga0070662_100025559
437 Ga0070662_100182943
438 Ga0070681_10014393
439 Ga0070681_10113122
440 Ga0070681_10183599
441 Ga0068867_100045205
442 Ga0070679_100003263
443 Ga0070679_100022097
444 Ga0070679_100095034
445 Ga0070679_100163029
446 Ga0070684_100028427
447 Ga0068853_100054229
448 Ga0068853_100115588
449 Ga0068853_100207488
450 Ga0068853_100351377
451 Ga0068853_100375599
452 Ga0070672_100012473
453 Ga0070696_100026819
454 Ga0070696_100030630
455 Ga0070696_100089549
456 Ga0070696_100118574
457 Ga0070693_100006002
458 Ga0070665_100056160
459 Ga0068855_100005000
460 Ga0068855_100068424
461 Ga0070664_100006860
462 Ga0070664_100233954
463 Ga0068857_100284541
464 Ga0068854_100004273
465 Ga0068854_100013401
466 Ga0068854_100284989
467 Ga0068856_100124347
468 Ga0068856_100374222
469 Ga0068856_100746791
470 Ga0068852_100006182
471 Ga0068852_100025747
472 Ga0068852_100025770
473 Ga0068852_100047865
474 Ga0068852_100068336
475 Ga0068852_100341071
476 Ga0068859_100348443
477 Ga0068851_10002906
478 Ga0068851_10027635
479 Ga0068851_10029896
480 Ga0068851_10044897
481 Ga0068860_100062901
482 Ga0081455_10002875
483 Ga0070716_100022752
484 Ga0097621_100088702
485 Ga0075431_100368470
486 Ga0068865_100015703
487 Ga0068865_100089854
488 Ga0097620_100348447
489 Ga0105240_10071725
490 Ga0105240_10111620
491 Ga0105240_10526708
492 Ga0105240_10736136
493 Ga0105245_10007531
494 Ga0105245_10279315
495 Ga0105241_10136666
496 Ga0105241_10172508
497 Ga0105242_10022850
498 Ga0105242_10569242
499 Ga0105238_10017053
500 Ga0105238_10069470
501 Ga0105246_10017231
502 Ga0157373_10008670
503 Ga0157373_10017085
504 Ga0157373_10058920
505 Ga0157371_10053432
506 Ga0157371_10228661
507 Ga0157371_10255439
508 Ga0157371_10326779
509 Ga0157370_10038713
510 Ga0157370_10060770
511 Ga0157370_10279646
512 Ga0157369_10002370
513 Ga0157369_10024776
514 Ga0157369_10046913
515 Ga0157369_10215556
516 Ga0157369_10418448
517 Ga0157369_10673068
518 Ga0157372_10005981
519 Ga0157372_10038566
520 Ga0157372_10075613
521 Ga0157372_10091814
522 Ga0157380_10245473
523 Ga0157379_10590789
524 Ga0157376_10061553
525 Ga0197907_10797091
526 Ga0197907_10914434
527 Ga0206356_10054440
528 Ga0206356_10332500
529 Ga0206356_11399675
530 Ga0206356_11540754
531 Ga0206354_10523033
532 Ga0206354_10611992
533 Ga0206354_10627850
534 Ga0206353_10016367
535 Ga0213875_10027427
536 Ga0209676_1003095
537 Ga0209676_1003992
538 Ga0209025_1001895
539 Ga0209564_1025670
540 Ga0209050_1001688
541 Ga0209256_1005277
542 Ga0209051_1002391
543 Ga0207682_10007233
544 Ga0207680_10083489
545 Ga0207647_10002208
546 Ga0207647_10018683
547 Ga0207647_10160252
548 Ga0207705_10000087
549 Ga0207705_10000153
550 Ga0207705_10000560
551 Ga0207705_10006119
552 Ga0207705_10043508
553 Ga0207705_10161570
554 Ga0207705_10166716
555 Ga0207705_10176601
556 Ga0207654_10113234
557 Ga0207707_10001030
558 Ga0207707_10001039
559 Ga0207707_10006315
560 Ga0207707_10012705
561 Ga0207707_10035028
562 Ga0207707_10039718
563 Ga0207707_10157757
564 Ga0207695_10000859
565 Ga0207695_10001326
566 Ga0207695_10041151
567 Ga0207695_10098768
568 Ga0207695_10136644
569 Ga0207671_10167035
570 Ga0207660_10003444
571 Ga0207660_10003556
572 Ga0207660_10164382
573 Ga0207660_10185376
574 Ga0207660_10241449
575 Ga0207662_10214116
576 Ga0207657_10000763
577 Ga0207657_10002836
578 Ga0207657_10003990
579 Ga0207657_10006705
580 Ga0207657_10008124
581 Ga0207657_10025402
582 Ga0207649_10001447
583 Ga0207649_10010230
584 Ga0207649_10045472
585 Ga0207649_10085159
586 Ga0207649_10124671
587 Ga0207649_10197145
588 Ga0207652_10000017
589 Ga0207652_10000040
590 Ga0207652_10000418
591 Ga0207652_10000801
592 Ga0207652_10009844
593 Ga0207652_10285155
594 Ga0207694_10017624
595 Ga0207687_10001315
596 Ga0207687_10213082
597 Ga0207644_10334891
598 Ga0207644_10354891
599 Ga0207690_10000494
600 Ga0207690_10000857
601 Ga0207690_10109812
602 Ga0207690_10200708
603 Ga0207690_10413751
604 Ga0207690_10423002
605 Ga0207706_10011550
606 Ga0207706_10088858
607 Ga0207686_10048002
608 Ga0207669_10145179
609 Ga0207704_10036618
610 Ga0207665_10170474
611 Ga0207691_10018849
612 Ga0207691_10022147
613 Ga0207689_10160000
614 Ga0207661_10005284
615 Ga0207661_10050906
616 Ga0207679_10007564
617 Ga0207679_10019553
618 Ga0207667_10000675
619 Ga0207667_10002419
620 Ga0207667_10002469
621 Ga0207667_10007504
622 Ga0207667_10010604
623 Ga0207651_10209592
624 Ga0207668_10057102
625 Ga0207640_10000495
626 Ga0207640_10001734
627 Ga0207640_10025876
628 Ga0207640_10027995
629 Ga0207640_10076572
630 Ga0207677_10086886
631 Ga0207639_10000429
632 Ga0207639_10001825
633 Ga0207639_10018071
634 Ga0207678_10002846
635 Ga0207678_10003458
636 Ga0207678_10008431
637 Ga0207678_10014039
638 Ga0207678_10035381
639 Ga0207678_10167347
640 Ga0207678_10288454
641 Ga0207708_10020714
642 Ga0207702_10011058
643 Ga0207702_10032065
644 Ga0207702_10069681
645 Ga0207648_10074094
646 Ga0207674_10002886
647 Ga0207674_10004194
648 Ga0207674_10026395
649 Ga0207683_10023790
650 Ga0207683_10025621
651 Ga0207698_10000491
652 Ga0207698_10000877
653 Ga0207698_10006712
654 Ga0207698_10137066
655 Ga0207698_10161030
656 Ga0207698_10325490
657 Ga0268264_10032310
658 Ga0307408_100149323
659 Ga0316575_10018895
660 Ga0316576_10001114
661 Ga0316576_10027035
662 Ga0316578_10023718
663 Ga0316578_10116625
664 Ga0307405_10093192
665 Ga0316577_10000644
666 Ga0307413_10001751
667 Ga0307413_10063154
668 Ga0307410_10000500
669 Ga0307410_10039222
670 Ga0307406_10007898
671 Ga0307412_10098308
672 Ga0307412_10303390
673 Ga0307409_100000732
674 Ga0307409_100022763
675 Ga0307416_100067781
676 Ga0307416_100098828
677 Ga0307416_100493229
678 Ga0307411_10000743
679 Ga0307411_10005352
680 Ga0307411_10402058
681 Ga0307415_100237375
682 Ga0316585_10020346
683 Ga0316580_10007458
684 Ga0316580_10007482
685 Ga0307507_10211748
686 Ga0316574_0012334
687 Ga0316582_0029387
688 Ga0316582_0380784
689 Ga0316584_0020853
690 Ga0316584_0075757
691 Ga0395899_0030132
692 Ga0395899_0206845
693 Ga0395900_0008812
694 Ga0395900_0254059
695 Ga0395900_0333049
696 Ga0395900_0544388
697 Ga0395905_0004997
698 Ga0395905_0014535
699 Ga0395905_0042916
700 Ga0395905_0278218
701 Ga0436364_0443476
702 Ga0436364_0663509
703 Ga0395901_0034542
704 Ga0395901_0065795
705 Ga0395901_0381501
706 Ga0400483_080672
707 Ga0400483_153515
708 Ga0436360_0109393
709 Ga0436363_1222896
710 Ga0451843_1628459
711 Ga0439458_0001514
712 Ga0466966_0086662
713 Ga0466959_0020206
714 Ga0466958_0293956
715 Ga0466967_0182675
716 Ga0466967_0312529
717 Ga0466967_0595362
718 Ga0495606_0263607
719 Ga0495616_0157160
720 Ga0496103_0075728
721 Ga0496107_0140198
722 Ga0496115_0002466
723 Ga0496118_0057111
724 Ga0501031_0156580
725 Ga0501032_0049015
726 Ga0501033_0041763
727 Ga0501033_0152001
728 Ga0501034_0307503
729 Ga0501037_0057505
730 Ga0501038_0340043
731 Ga0501043_0058262
732 Ga0501046_0062485
733 Ga0501046_0090123
734 Ga0501047_0009491
735 Ga0501047_0012103
736 Ga0501047_0280788
737 Ga0501067_0201432
738 Ga0501069_0000354
739 Ga0501069_0007349
740 Ga0501069_0139250
741 Ga0501070_0004257
742 Ga0501070_0127267
743 Ga0501072_0365262
744 Ga0501073_0004569
745 Ga0501073_0078036
746 Ga0501074_0003986
747 Ga0501074_0008081
748 Ga0501075_0321944
749 Ga0501079_0151714
750 Ga0501080_0003974
751 Ga0501080_0004446
752 Ga0501080_0044234
753 Ga0501080_0231414
754 Ga0501083_0092006
755 Ga0501035_0018090
756 Ga0501035_0091124
757 Ga0501044_0007113
758 Ga0501044_0008512
759 Ga0501044_0116103
760 Ga0495619_0341608
761 Ga0500627_0008605
762 Ga0500637_0057329
763 8048747317
764 8055228574

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF23016

RsmI_C

RsmI C-terminal HTH domain

270

309

0.95

PF00590

TP_methylase

Tetrapyrrole (Corrin/Porphyrin) Methylases

43

244

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hw4-assembly1.cif.gz_A crystal structure of escherichia coli 16s rrna methyltransferase rsmi in complex with adomet 0.9556 7 229
5hw4-assembly1.cif.gz_B crystal structure of escherichia coli 16s rrna methyltransferase rsmi in complex with adomet 0.953 7 229
3kwp-assembly1.cif.gz_A-2 crystal structure of putative methyltransferase from lactobacillus brevis 0.9514 5 229
5hw4-assembly2.cif.gz_C-2 crystal structure of escherichia coli 16s rrna methyltransferase rsmi in complex with adomet 0.9507 7 229
3hh1-assembly2.cif.gz_C the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.9413 6 115
ID Description Score Start End Superfamily
af_Q2FZP5_4_80_3.10.110.10 Alpha Beta;Roll;Ubiquitin Conjugating Enzyme;Ubiquitin Conjugating Enzyme 0.9746 237 266 3.10.110.10
af_P9WGW7_115_230_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9648 116 229 3.30.950.10
5hw4C02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9607 116 229 3.30.950.10
3kwpA02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9557 116 229 3.30.950.10
5hw4C01 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.9543 7 115 3.40.1010.10
ID Description Score Start End GO Terms
AF-A0A533J181-F1-model_v4 deleted 0.9774 7 99
AF-A0A439SM41-F1-model_v4 rRNA (Cytidine-2'-O-)-methyltransferase 0.9768 9 105 GO:0008168
GO:0032259
AF-A0A257QIP6-F1-model_v4 rRNA (Cytidine-2'-O-)-methyltransferase 0.9747 6 123 GO:0008168
GO:0032259
AF-A0A357BS29-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.9729 7 138 GO:0008168
GO:0032259
AF-A0A537VBW8-F1-model_v4 rRNA (Cytidine-2'-O-)-methyltransferase 0.9719 6 99 GO:0008168
GO:0032259

Map