F428660

General Info

Members Datasets Scaffolds Average Seq Length
380 183 760 233

Family's Representative Sequence

Representative Sequence 3300014497|Ga0182008_10048523|Ga0182008_100485232
Length 275
Sequence MRTPFKAKSDKWLIYKLVVEPAVRTRSTPSYKLPNYPNEMIPLRDDTPRFSTPYVTYFIIALNILVWFYELMLGGQSHRALDRFIYQFGVVPSYDLAVLSGATELSRTAGILPIFTSMFLHGSWLHIIGNMWVLWIFGDNIEDYLGHFKYLLFYFASGLGAGLLHILFNLNSRLPSVGASGAIAGVMGAYFVLYPRARVLTIVPLIIFFTFWWLPAWIVLGYWFLVQFLSGAATAIAATSQTTGGVAFWAHVGGFAAGILLIKLVPPRPRRYSYR

Samples

Sample ID Description Type Environment
1 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
76 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
77 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
78 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
79 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
80 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
81 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
123 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
124 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
127 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
128 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
129 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
132 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
133 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
134 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
135 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
136 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
137 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
138 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
139 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
140 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
141 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
142 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
143 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
144 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
145 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
146 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
147 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
148 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
149 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
150 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
151 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
152 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
153 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
154 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
155 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
156 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
157 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
158 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
159 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
160 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
161 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
162 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
163 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
164 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
165 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
166 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
167 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
168 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
171 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
172 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
176 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
177 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
180 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
181 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
182 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
183 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.37
Metatranscriptomes 2.63
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.26
Nodule 0
Rhizoplane 3.42
Rhizosphere 94.21
Stem 0
Stem Tuber 0
Unclassified 21.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0182008_10048523 3300014497 Bacteria 2108
2 LJNas_1002162 3300000546 Bacteria 2458
3 Ga0065712_10023444 3300005290 Bacteria 1709
4 Ga0070658_10349881 3300005327 Bacteria 1265
5 Ga0070676_10193299 3300005328 Bacteria 1330
6 Ga0070683_100138229 3300005329 Unclassified 2308
7 Ga0070670_100084810 3300005331 Bacteria 2722
8 Ga0068869_100016525 3300005334 Unclassified 4976
9 Ga0070666_10006359 3300005335 Bacteria 7266
10 Ga0070680_100330358 3300005336 Unclassified 1295
11 Ga0070682_100053298 3300005337 Bacteria 2535
12 Ga0068868_100010136 3300005338 Bacteria 6809
13 Ga0068868_100052693 3300005338 Unclassified 3203
14 Ga0068868_100538620 3300005338 Bacteria 1027
15 Ga0070673_100572197 3300005364 Bacteria 1028
16 Ga0070709_10000663 3300005434 Bacteria 19594
17 Ga0070709_10038148 3300005434 Bacteria 2940
18 Ga0070709_10128195 3300005434 Bacteria 1729
19 Ga0070709_10226049 3300005434 Bacteria 1337
20 Ga0070714_100037484 3300005435 Unclassified 4074
21 Ga0070714_100053172 3300005435 Bacteria 3455
22 Ga0070714_100187713 3300005435 Bacteria 1884
23 Ga0070714_100189173 3300005435 Bacteria 1877
24 Ga0070713_100000288 3300005436 Bacteria 33342
25 Ga0070713_100019269 3300005436 Bacteria 5205
26 Ga0070713_100022893 3300005436 Bacteria 4837
27 Ga0070713_100076932 3300005436 Unclassified 2836
28 Ga0070713_100127484 3300005436 Unclassified 2240
29 Ga0070713_100149202 3300005436 Unclassified 2078
30 Ga0070713_100150045 3300005436 Unclassified 2073
31 Ga0070713_100255826 3300005436 Bacteria 1599
32 Ga0070713_100320852 3300005436 Unclassified 1431
33 Ga0070713_100337969 3300005436 Bacteria 1394
34 Ga0070710_10002080 3300005437 Bacteria 9488
35 Ga0070710_10012391 3300005437 Bacteria 4234
36 Ga0070711_100018276 3300005439 Bacteria 4473
37 Ga0070711_100622690 3300005439 Unclassified 902
38 Ga0070694_100177763 3300005444 Bacteria 1572
39 Ga0070708_100000595 3300005445 Bacteria 27186
40 Ga0070708_100041996 3300005445 Bacteria 4012
41 Ga0070708_100233778 3300005445 Bacteria 1725
42 Ga0070708_100454406 3300005445 Bacteria 1208
43 Ga0070681_10005766 3300005458 Bacteria 11974
44 Ga0070681_10026890 3300005458 Bacteria 5785
45 Ga0070681_10374086 3300005458 Unclassified 1335
46 Ga0068867_100043155 3300005459 Bacteria 3301
47 Ga0070685_10004730 3300005466 Bacteria 6893
48 Ga0070706_100166768 3300005467 Bacteria 2056
49 Ga0070706_100372670 3300005467 Unclassified 1330
50 Ga0070707_100062125 3300005468 Bacteria 3584
51 Ga0070707_100368187 3300005468 Unclassified 1396
52 Ga0070707_100821143 3300005468 Bacteria 894
53 Ga0070699_100014509 3300005518 Bacteria 6776
54 Ga0070699_100014709 3300005518 Bacteria 6729
55 Ga0070699_100363988 3300005518 Unclassified 1304
56 Ga0070697_100000069 3300005536 Bacteria 82627
57 Ga0070697_100005737 3300005536 Bacteria 9571
58 Ga0070697_100122990 3300005536 Unclassified 2171
59 Ga0070697_100151263 3300005536 Bacteria 1956
60 Ga0070697_100176094 3300005536 Bacteria 1812
61 Ga0070672_100177237 3300005543 Bacteria 1775
62 Ga0070693_100108448 3300005547 Bacteria 1704
63 Ga0070693_100154787 3300005547 Bacteria 1455
64 Ga0068855_100432810 3300005563 Bacteria 1438
65 Ga0068855_100525345 3300005563 Bacteria 1283
66 Ga0070664_100277400 3300005564 Bacteria 1511
67 Ga0070664_100282305 3300005564 Bacteria 1497
68 Ga0068857_100126339 3300005577 Bacteria 2305
69 Ga0068857_100355724 3300005577 Bacteria 1357
70 Ga0068854_100015148 3300005578 Bacteria 5100
71 Ga0068854_100183171 3300005578 Bacteria 1637
72 Ga0068856_100009525 3300005614 Bacteria 9437
73 Ga0068856_100224721 3300005614 Unclassified 1893
74 Ga0068856_100341506 3300005614 Bacteria 1515
75 Ga0068856_100400412 3300005614 Bacteria 1392
76 Ga0068856_100905479 3300005614 Bacteria 901
77 Ga0068856_101202377 3300005614 Unclassified 774
78 Ga0068852_100157460 3300005616 Bacteria 2117
79 Ga0068852_100684005 3300005616 Unclassified 1035
80 Ga0068859_100003437 3300005617 Bacteria 16100
81 Ga0068863_100115709 3300005841 Bacteria 2555
82 Ga0068863_100168590 3300005841 Unclassified 2100
83 Ga0068863_100204477 3300005841 Bacteria 1900
84 Ga0068863_100565388 3300005841 Bacteria 1124
85 Ga0068858_100005022 3300005842 Bacteria 12966
86 Ga0068858_100178383 3300005842 Bacteria 2005
87 Ga0068860_100151293 3300005843 Bacteria 2235
88 Ga0070717_10001784 3300006028 Bacteria 14999
89 Ga0070717_10002934 3300006028 Bacteria 12109
90 Ga0070717_10015030 3300006028 Bacteria 5965
91 Ga0070717_10153234 3300006028 Bacteria 1995
92 Ga0070717_10189649 3300006028 Bacteria 1796
93 Ga0070717_10242894 3300006028 Unclassified 1589
94 Ga0070717_10345630 3300006028 Bacteria 1329
95 Ga0070717_10348980 3300006028 Bacteria 1323
96 Ga0070717_10558565 3300006028 Bacteria 1037
97 Ga0070715_10100767 3300006163 Bacteria 1347
98 Ga0070716_100006469 3300006173 Bacteria 5724
99 Ga0070716_100034395 3300006173 Unclassified 2779
100 Ga0070716_100136711 3300006173 Bacteria 1557
101 Ga0070712_100000525 3300006175 Bacteria 22111
102 Ga0070712_100010745 3300006175 Bacteria 5785
103 Ga0070712_100023053 3300006175 Bacteria 4107
104 Ga0070712_100214397 3300006175 Bacteria 1520
105 Ga0097621_100106269 3300006237 Unclassified 2367
106 Ga0097621_100364593 3300006237 Bacteria 1288
107 Ga0068871_100000387 3300006358 Bacteria 30959
108 Ga0068871_100219307 3300006358 Bacteria 1647
109 Ga0068871_100428529 3300006358 Bacteria 1182
110 Ga0068871_100755758 3300006358 Bacteria 894
111 Ga0075433_10000048 3300006852 Bacteria 50702
112 Ga0075433_10014358 3300006852 Bacteria 6468
113 Ga0075434_100017473 3300006871 Bacteria 6913
114 Ga0075434_100029822 3300006871 Bacteria 5369
115 Ga0075434_100043947 3300006871 Bacteria 4432
116 Ga0075434_100186244 3300006871 Bacteria 2096
117 Ga0075429_100535668 3300006880 Bacteria 1026
118 Ga0068865_100056792 3300006881 Bacteria 2728
119 Ga0068865_100111229 3300006881 Bacteria 2021
120 Ga0075436_100006700 3300006914 Bacteria 7887
121 Ga0075436_100037980 3300006914 Bacteria 3324
122 Ga0075436_100058389 3300006914 Unclassified 2664
123 Ga0075436_100531035 3300006914 Unclassified 863
124 Ga0097620_100003437 3300006931 Bacteria 16100
125 Ga0075435_100003723 3300007076 Bacteria 10386
126 Ga0075435_100005663 3300007076 Bacteria 8758
127 Ga0075435_100189613 3300007076 Bacteria 1740
128 Ga0105240_10017920 3300009093 Bacteria 9525
129 Ga0105240_10022192 3300009093 Bacteria 8421
130 Ga0105240_10081941 3300009093 Bacteria 3963
131 Ga0105240_10119522 3300009093 Bacteria 3174
132 Ga0105245_10002370 3300009098 Bacteria 17039
133 Ga0105245_10501522 3300009098 Bacteria 1230
134 Ga0105247_10178364 3300009101 Bacteria 1416
135 Ga0114129_10093043 3300009147 Bacteria 4177
136 Ga0114129_10162799 3300009147 Bacteria 3046
137 Ga0105241_10016210 3300009174 Bacteria 5460
138 Ga0105241_10041532 3300009174 Bacteria 3475
139 Ga0105241_10165070 3300009174 Bacteria 1824
140 Ga0105242_10027491 3300009176 Unclassified 4517
141 Ga0105242_10135087 3300009176 Bacteria 2134
142 Ga0105248_10017578 3300009177 Bacteria 7887
143 Ga0105248_10087501 3300009177 Bacteria 3506
144 Ga0105237_10044928 3300009545 Bacteria 4448
145 Ga0105237_10058855 3300009545 Bacteria 3846
146 Ga0105237_10101879 3300009545 Bacteria 2863
147 Ga0105237_10318688 3300009545 Bacteria 1558
148 Ga0099796_10008278 3300010159 Bacteria 2766
149 Ga0105239_10049374 3300010375 Unclassified 4614
150 Ga0105239_10067537 3300010375 Unclassified 3928
151 Ga0105239_11002399 3300010375 Bacteria 960
152 Ga0157373_10007492 3300013100 Bacteria 8119
153 Ga0157373_10060756 3300013100 Unclassified 2677
154 Ga0157370_10140502 3300013104 Bacteria 2250
155 Ga0157369_10038011 3300013105 Bacteria 5265
156 Ga0157369_10097304 3300013105 Bacteria 3140
157 Ga0157369_10196722 3300013105 Bacteria 2117
158 Ga0157369_10593509 3300013105 Bacteria 1144
159 Ga0157374_10023735 3300013296 Bacteria 5490
160 Ga0157374_10057262 3300013296 Bacteria 3640
161 Ga0157374_10100449 3300013296 Unclassified 2773
162 Ga0157378_10000287 3300013297 Bacteria 49194
163 Ga0157378_10084164 3300013297 Unclassified 2879
164 Ga0157378_10225338 3300013297 Unclassified 1784
165 Ga0157378_10292909 3300013297 Bacteria 1573
166 Ga0163162_10045135 3300013306 Unclassified 4415
167 Ga0163162_10278177 3300013306 Bacteria 1806
168 Ga0157372_10001762 3300013307 Bacteria 23466
169 Ga0157372_10012688 3300013307 Bacteria 8976
170 Ga0157372_10019542 3300013307 Bacteria 7302
171 Ga0157372_10034290 3300013307 Bacteria 5579
172 Ga0157372_10037557 3300013307 Bacteria 5344
173 Ga0157372_10051100 3300013307 Bacteria 4599
174 Ga0157372_10088840 3300013307 Bacteria 3510
175 Ga0157372_10155450 3300013307 Bacteria 2642
176 Ga0157372_10207957 3300013307 Bacteria 2268
177 Ga0157372_10522473 3300013307 Bacteria 1384
178 Ga0157375_10029397 3300013308 Bacteria 5168
179 Ga0157375_10215497 3300013308 Unclassified 2078
180 Ga0163163_10006557 3300014325 Bacteria 10194
181 Ga0163163_10009778 3300014325 Bacteria 8592
182 Ga0163163_10309727 3300014325 Bacteria 1632
183 Ga0157380_10433629 3300014326 Bacteria 1257
184 Ga0157379_10031737 3300014968 Bacteria 4706
185 Ga0157379_10252055 3300014968 Bacteria 1603
186 Ga0157376_10016440 3300014969 Bacteria 5617
187 Ga0157376_10050708 3300014969 Bacteria 3444
188 Ga0182007_10001865 3300015262 Bacteria 10993
189 Ga0182005_1040587 3300015265 Bacteria 1266
190 Ga0213873_10006732 3300021358 Bacteria 2273
191 Ga0213874_10006251 3300021377 Bacteria 2815
192 Ga0213874_10012813 3300021377 Bacteria 2159
193 Ga0224570_100152 3300022730 Bacteria 4661
194 Ga0228598_1000521 3300024227 Bacteria 7998
195 Ga0207656_10084196 3300025321 Bacteria 1434
196 Ga0207692_10001166 3300025898 Bacteria 9713
197 Ga0207692_10018517 3300025898 Unclassified 3128
198 Ga0207642_10139199 3300025899 Bacteria 1277
199 Ga0207680_10004357 3300025903 Bacteria 6706
200 Ga0207647_10002682 3300025904 Bacteria 13425
201 Ga0207699_10079251 3300025906 Bacteria 2031
202 Ga0207699_10095710 3300025906 Bacteria 1873
203 Ga0207699_10127610 3300025906 Bacteria 1654
204 Ga0207705_10112825 3300025909 Bacteria 2010
205 Ga0207684_10770310 3300025910 Unclassified 815
206 Ga0207654_10024375 3300025911 Unclassified 3252
207 Ga0207707_10267059 3300025912 Unclassified 1483
208 Ga0207707_10578050 3300025912 Unclassified 953
209 Ga0207707_10637102 3300025912 Bacteria 899
210 Ga0207695_10016331 3300025913 Bacteria 8689
211 Ga0207695_10052920 3300025913 Bacteria 4250
212 Ga0207695_10112339 3300025913 Bacteria 2702
213 Ga0207671_10080424 3300025914 Bacteria 2443
214 Ga0207671_10248295 3300025914 Bacteria 1399
215 Ga0207693_10000203 3300025915 Bacteria 54373
216 Ga0207693_10002101 3300025915 Bacteria 17385
217 Ga0207693_10048864 3300025915 Bacteria 3322
218 Ga0207693_10053625 3300025915 Unclassified 3164
219 Ga0207663_10032460 3300025916 Unclassified 3100
220 Ga0207663_10549569 3300025916 Unclassified 903
221 Ga0207663_10559301 3300025916 Bacteria 895
222 Ga0207663_10592375 3300025916 Bacteria 870
223 Ga0207657_10001068 3300025919 Bacteria 29011
224 Ga0207649_10257644 3300025920 Bacteria 1259
225 Ga0207652_10155139 3300025921 Unclassified 2051
226 Ga0207646_10321332 3300025922 Unclassified 1399
227 Ga0207650_10331008 3300025925 Bacteria 1249
228 Ga0207687_10027847 3300025927 Bacteria 3793
229 Ga0207687_10354487 3300025927 Bacteria 1196
230 Ga0207700_10003811 3300025928 Bacteria 8810
231 Ga0207700_10017211 3300025928 Bacteria 4824
232 Ga0207700_10060997 3300025928 Unclassified 2859
233 Ga0207700_10242248 3300025928 Bacteria 1537
234 Ga0207700_10276232 3300025928 Bacteria 1444
235 Ga0207700_10460134 3300025928 Unclassified 1122
236 Ga0207700_10608372 3300025928 Unclassified 973
237 Ga0207664_10024676 3300025929 Bacteria 4520
238 Ga0207664_10057866 3300025929 Bacteria 3083
239 Ga0207664_10231593 3300025929 Bacteria 1606
240 Ga0207664_10246668 3300025929 Bacteria 1557
241 Ga0207664_10634278 3300025929 Unclassified 960
242 Ga0207690_10069687 3300025932 Bacteria 2420
243 Ga0207686_10017338 3300025934 Unclassified 4057
244 Ga0207704_10331259 3300025938 Bacteria 1178
245 Ga0207665_10010521 3300025939 Bacteria 6078
246 Ga0207665_10033386 3300025939 Bacteria 3410
247 Ga0207665_10048291 3300025939 Unclassified 2856
248 Ga0207691_10186199 3300025940 Unclassified 1812
249 Ga0207711_10031833 3300025941 Unclassified 4456
250 Ga0207689_10002500 3300025942 Bacteria 17076
251 Ga0207661_10412398 3300025944 Bacteria 1226
252 Ga0207667_10114566 3300025949 Unclassified 2779
253 Ga0207667_10332331 3300025949 Bacteria 1551
254 Ga0207651_10718330 3300025960 Bacteria 881
255 Ga0207640_10168577 3300025981 Bacteria 1629
256 Ga0207677_10053695 3300026023 Unclassified 2745
257 Ga0207677_10134674 3300026023 Bacteria 1882
258 Ga0207703_10012076 3300026035 Bacteria 6728
259 Ga0207703_10167927 3300026035 Bacteria 1927
260 Ga0207639_10328963 3300026041 Bacteria 1359
261 Ga0207702_10002510 3300026078 Bacteria 17306
262 Ga0207702_10137908 3300026078 Bacteria 2203
263 Ga0207702_10200246 3300026078 Bacteria 1850
264 Ga0207641_10022330 3300026088 Bacteria 5209
265 Ga0207641_10650570 3300026088 Unclassified 1035
266 Ga0207648_10282672 3300026089 Bacteria 1484
267 Ga0207648_10311658 3300026089 Unclassified 1413
268 Ga0207674_10044614 3300026116 Bacteria 4566
269 Ga0207675_100609027 3300026118 Bacteria 1096
270 Ga0265354_1002168 3300028016 Unclassified 2515
271 Ga0265356_1000376 3300028017 Bacteria 8112
272 Ga0265356_1005762 3300028017 Bacteria 1467
273 Ga0268266_10415626 3300028379 Bacteria 1274
274 Ga0268264_10046060 3300028381 Bacteria 3622
275 Ga0265322_10040400 3300028654 Bacteria 1328
276 Ga0265338_10001433 3300028800 Bacteria 38741
277 Ga0265338_10064605 3300028800 Unclassified 3181
278 Ga0265338_10079043 3300028800 Bacteria 2770
279 Ga0265338_10298223 3300028800 Bacteria 1172
280 Ga0265338_10581766 3300028800 Bacteria 781
281 Ga0265762_1000311 3300030760 Bacteria 8261
282 Ga0265762_1002537 3300030760 Unclassified 3292
283 Ga0265770_1008911 3300030878 Unclassified 1439
284 Ga0265770_1009954 3300030878 Unclassified 1375
285 Ga0265760_10000390 3300031090 Bacteria 12257
286 Ga0265760_10000434 3300031090 Bacteria 11750
287 Ga0265760_10000553 3300031090 Bacteria 10580
288 Ga0265760_10003607 3300031090 Bacteria 4491
289 Ga0265760_10010574 3300031090 Bacteria 2636
290 Ga0265760_10017528 3300031090 Unclassified 2057
291 Ga0265340_10052639 3300031247 Bacteria 1968
292 Ga0265339_10036392 3300031249 Bacteria 2756
293 Ga0265339_10112703 3300031249 Bacteria 1405
294 Ga0265339_10129378 3300031249 Bacteria 1292
295 Ga0265339_10148124 3300031249 Bacteria 1189
296 Ga0265316_10029710 3300031344 Bacteria 4489
297 Ga0265316_10271528 3300031344 Bacteria 1241
298 Ga0265316_10282780 3300031344 Bacteria 1212
299 Ga0265314_10049537 3300031711 Bacteria 2940
300 Ga0265314_10056878 3300031711 Bacteria 2690
301 Ga0373923_0046721 3300035111 Bacteria 1802
302 Ga0373936_0131144 3300035113 Bacteria 1077
303 Ga0373936_0158878 3300035113 Unclassified 984
304 Ga0373941_0036020 3300035115 Bacteria 1503
305 Ga0373943_0048890 3300035170 Bacteria 2074
306 Ga0373943_0346661 3300035170 Unclassified 850
307 Ga0373946_0031768 3300035171 Bacteria 2118
308 Ga0316574_0384523 3300035398 Bacteria 885
309 Ga0373935_0675735 3300035692 Unclassified 759
310 Ga0373927_0027507 3300035695 Unclassified 3713
311 Ga0373927_0066913 3300035695 Bacteria 2325
312 Ga0373927_0209642 3300035695 Bacteria 1280
313 Ga0373933_0149123 3300035724 Bacteria 1480
314 Ga0373947_0012518 3300035725 Bacteria 4866
315 Ga0373937_0027196 3300036401 Bacteria 5171
316 Ga0373937_0933702 3300036401 Unclassified 816
317 Ga0373925_0079077 3300037068 Unclassified 2498
318 Ga0373925_0148021 3300037068 Bacteria 1841
319 Ga0436364_0697912 3300037853 Bacteria 1969
320 Ga0400483_275173 3300039062 Bacteria 33880
321 Ga0436365_0817811 3300039437 Unclassified 1390
322 Ga0436363_0734583 3300039450 Bacteria 4161
323 Ga0436363_1079012 3300039450 Bacteria 2408
324 Ga0436363_1093435 3300039450 Bacteria 2172
325 Ga0436362_0697763 3300039453 Bacteria 3170
326 Ga0453683_0150422 3300044673 Bacteria 1471
327 Ga0451576_0132089 3300045051 Bacteria 2603
328 Ga0451576_0506652 3300045051 Unclassified 1268
329 Ga0451576_1007804 3300045051 Bacteria 873
330 Ga0466967_0003157 3300045976 Bacteria 10621
331 Ga0466967_0240122 3300045976 Bacteria 1728
332 Ga0495653_0371177 3300046463 Bacteria 916
333 Ga0495580_0005677 3300046472 Bacteria 10262
334 Ga0495580_0052827 3300046472 Unclassified 2869
335 Ga0495580_0191631 3300046472 Unclassified 1410
336 Ga0495582_0104842 3300046473 Bacteria 1585
337 Ga0495630_0118618 3300046517 Bacteria 2007
338 Ga0495645_0263542 3300046543 Unclassified 1140
339 Ga0495635_0252660 3300046663 Unclassified 1188
340 Ga0495647_0026472 3300046681 Bacteria 2125
341 Ga0495658_0006517 3300046683 Bacteria 5735
342 Ga0495658_0011963 3300046683 Bacteria 4380
343 Ga0495669_0004965 3300046684 Bacteria 5530
344 Ga0495669_0174395 3300046684 Unclassified 1024
345 Ga0495600_0320283 3300046809 Bacteria 975
346 Ga0495674_0078526 3300047319 Bacteria 2836
347 Ga0495674_0087772 3300047319 Bacteria 2661
348 Ga0495602_0126555 3300048088 Unclassified 2046
349 Ga0495602_0205806 3300048088 Bacteria 1498
350 Ga0496100_0181400 3300048903 Bacteria 1523
351 Ga0496101_0429740 3300048904 Bacteria 1041
352 Ga0496105_0233843 3300048908 Bacteria 1493
353 Ga0496108_0108781 3300048911 Bacteria 2368
354 Ga0496109_0097758 3300048912 Bacteria 2721
355 Ga0496109_0206446 3300048912 Unclassified 1847
356 Ga0496110_0014240 3300048913 Bacteria 6598
357 Ga0496112_0056891 3300048915 Bacteria 3850
358 Ga0496112_0091257 3300048915 Unclassified 3015
359 Ga0496112_0176301 3300048915 Unclassified 2102
360 Ga0496112_0582045 3300048915 Bacteria 1052
361 Ga0496113_0091211 3300048916 Bacteria 2348
362 Ga0496115_0588385 3300048918 Bacteria 886
363 Ga0501069_0401325 3300049585 Bacteria 811
364 nmdc:mga05p37_212474_c1 3300050507 Bacteria 2338
365 nmdc:mga0n895_13548_c1 3300050512 Bacteria 7364
366 nmdc:mga0n895_482_c1 3300050512 Bacteria 26852
367 nmdc:mga0n895_5946_c1 3300050512 Bacteria 10265
368 nmdc:mga0rr50_1340_c1 3300050513 Bacteria 13435
369 nmdc:mga0rr50_146726_c1 3300050513 Bacteria 1903
370 nmdc:mga0rr50_2317_c2 3300050513 Bacteria 6511
371 nmdc:mga0rr50_30499_c1 3300050513 Bacteria 3818
372 nmdc:mga08x19_2268_c1 3300050514 Bacteria 11698
373 nmdc:mga08x19_23979_c1 3300050514 Bacteria 3788
374 nmdc:mga08x19_29363_c1 3300050514 Bacteria 3448
375 nmdc:mga08x19_471327_c1 3300050514 Unclassified 885
376 nmdc:mga0a205_107_c2 3300050515 Bacteria 46625
377 nmdc:mga0a205_171023_c1 3300050515 Bacteria 2069
378 Ga0495619_0177140 3300053085 Bacteria 1475
379 Ga0495619_0199918 3300053085 Unclassified 1383
380 Ga0500590_051093 3300053148 Bacteria 2101
381 Ga0182008_10048523
382 LJNas_1002162
383 Ga0065712_10023444
384 Ga0070658_10349881
385 Ga0070676_10193299
386 Ga0070683_100138229
387 Ga0070670_100084810
388 Ga0068869_100016525
389 Ga0070666_10006359
390 Ga0070680_100330358
391 Ga0070682_100053298
392 Ga0068868_100010136
393 Ga0068868_100052693
394 Ga0068868_100538620
395 Ga0070673_100572197
396 Ga0070709_10000663
397 Ga0070709_10038148
398 Ga0070709_10128195
399 Ga0070709_10226049
400 Ga0070714_100037484
401 Ga0070714_100053172
402 Ga0070714_100187713
403 Ga0070714_100189173
404 Ga0070713_100000288
405 Ga0070713_100019269
406 Ga0070713_100022893
407 Ga0070713_100076932
408 Ga0070713_100127484
409 Ga0070713_100149202
410 Ga0070713_100150045
411 Ga0070713_100255826
412 Ga0070713_100320852
413 Ga0070713_100337969
414 Ga0070710_10002080
415 Ga0070710_10012391
416 Ga0070711_100018276
417 Ga0070711_100622690
418 Ga0070694_100177763
419 Ga0070708_100000595
420 Ga0070708_100041996
421 Ga0070708_100233778
422 Ga0070708_100454406
423 Ga0070681_10005766
424 Ga0070681_10026890
425 Ga0070681_10374086
426 Ga0068867_100043155
427 Ga0070685_10004730
428 Ga0070706_100166768
429 Ga0070706_100372670
430 Ga0070707_100062125
431 Ga0070707_100368187
432 Ga0070707_100821143
433 Ga0070699_100014509
434 Ga0070699_100014709
435 Ga0070699_100363988
436 Ga0070697_100000069
437 Ga0070697_100005737
438 Ga0070697_100122990
439 Ga0070697_100151263
440 Ga0070697_100176094
441 Ga0070672_100177237
442 Ga0070693_100108448
443 Ga0070693_100154787
444 Ga0068855_100432810
445 Ga0068855_100525345
446 Ga0070664_100277400
447 Ga0070664_100282305
448 Ga0068857_100126339
449 Ga0068857_100355724
450 Ga0068854_100015148
451 Ga0068854_100183171
452 Ga0068856_100009525
453 Ga0068856_100224721
454 Ga0068856_100341506
455 Ga0068856_100400412
456 Ga0068856_100905479
457 Ga0068856_101202377
458 Ga0068852_100157460
459 Ga0068852_100684005
460 Ga0068859_100003437
461 Ga0068863_100115709
462 Ga0068863_100168590
463 Ga0068863_100204477
464 Ga0068863_100565388
465 Ga0068858_100005022
466 Ga0068858_100178383
467 Ga0068860_100151293
468 Ga0070717_10001784
469 Ga0070717_10002934
470 Ga0070717_10015030
471 Ga0070717_10153234
472 Ga0070717_10189649
473 Ga0070717_10242894
474 Ga0070717_10345630
475 Ga0070717_10348980
476 Ga0070717_10558565
477 Ga0070715_10100767
478 Ga0070716_100006469
479 Ga0070716_100034395
480 Ga0070716_100136711
481 Ga0070712_100000525
482 Ga0070712_100010745
483 Ga0070712_100023053
484 Ga0070712_100214397
485 Ga0097621_100106269
486 Ga0097621_100364593
487 Ga0068871_100000387
488 Ga0068871_100219307
489 Ga0068871_100428529
490 Ga0068871_100755758
491 Ga0075433_10000048
492 Ga0075433_10014358
493 Ga0075434_100017473
494 Ga0075434_100029822
495 Ga0075434_100043947
496 Ga0075434_100186244
497 Ga0075429_100535668
498 Ga0068865_100056792
499 Ga0068865_100111229
500 Ga0075436_100006700
501 Ga0075436_100037980
502 Ga0075436_100058389
503 Ga0075436_100531035
504 Ga0097620_100003437
505 Ga0075435_100003723
506 Ga0075435_100005663
507 Ga0075435_100189613
508 Ga0105240_10017920
509 Ga0105240_10022192
510 Ga0105240_10081941
511 Ga0105240_10119522
512 Ga0105245_10002370
513 Ga0105245_10501522
514 Ga0105247_10178364
515 Ga0114129_10093043
516 Ga0114129_10162799
517 Ga0105241_10016210
518 Ga0105241_10041532
519 Ga0105241_10165070
520 Ga0105242_10027491
521 Ga0105242_10135087
522 Ga0105248_10017578
523 Ga0105248_10087501
524 Ga0105237_10044928
525 Ga0105237_10058855
526 Ga0105237_10101879
527 Ga0105237_10318688
528 Ga0099796_10008278
529 Ga0105239_10049374
530 Ga0105239_10067537
531 Ga0105239_11002399
532 Ga0157373_10007492
533 Ga0157373_10060756
534 Ga0157370_10140502
535 Ga0157369_10038011
536 Ga0157369_10097304
537 Ga0157369_10196722
538 Ga0157369_10593509
539 Ga0157374_10023735
540 Ga0157374_10057262
541 Ga0157374_10100449
542 Ga0157378_10000287
543 Ga0157378_10084164
544 Ga0157378_10225338
545 Ga0157378_10292909
546 Ga0163162_10045135
547 Ga0163162_10278177
548 Ga0157372_10001762
549 Ga0157372_10012688
550 Ga0157372_10019542
551 Ga0157372_10034290
552 Ga0157372_10037557
553 Ga0157372_10051100
554 Ga0157372_10088840
555 Ga0157372_10155450
556 Ga0157372_10207957
557 Ga0157372_10522473
558 Ga0157375_10029397
559 Ga0157375_10215497
560 Ga0163163_10006557
561 Ga0163163_10009778
562 Ga0163163_10309727
563 Ga0157380_10433629
564 Ga0157379_10031737
565 Ga0157379_10252055
566 Ga0157376_10016440
567 Ga0157376_10050708
568 Ga0182007_10001865
569 Ga0182005_1040587
570 Ga0213873_10006732
571 Ga0213874_10006251
572 Ga0213874_10012813
573 Ga0224570_100152
574 Ga0228598_1000521
575 Ga0207656_10084196
576 Ga0207692_10001166
577 Ga0207692_10018517
578 Ga0207642_10139199
579 Ga0207680_10004357
580 Ga0207647_10002682
581 Ga0207699_10079251
582 Ga0207699_10095710
583 Ga0207699_10127610
584 Ga0207705_10112825
585 Ga0207684_10770310
586 Ga0207654_10024375
587 Ga0207707_10267059
588 Ga0207707_10578050
589 Ga0207707_10637102
590 Ga0207695_10016331
591 Ga0207695_10052920
592 Ga0207695_10112339
593 Ga0207671_10080424
594 Ga0207671_10248295
595 Ga0207693_10000203
596 Ga0207693_10002101
597 Ga0207693_10048864
598 Ga0207693_10053625
599 Ga0207663_10032460
600 Ga0207663_10549569
601 Ga0207663_10559301
602 Ga0207663_10592375
603 Ga0207657_10001068
604 Ga0207649_10257644
605 Ga0207652_10155139
606 Ga0207646_10321332
607 Ga0207650_10331008
608 Ga0207687_10027847
609 Ga0207687_10354487
610 Ga0207700_10003811
611 Ga0207700_10017211
612 Ga0207700_10060997
613 Ga0207700_10242248
614 Ga0207700_10276232
615 Ga0207700_10460134
616 Ga0207700_10608372
617 Ga0207664_10024676
618 Ga0207664_10057866
619 Ga0207664_10231593
620 Ga0207664_10246668
621 Ga0207664_10634278
622 Ga0207690_10069687
623 Ga0207686_10017338
624 Ga0207704_10331259
625 Ga0207665_10010521
626 Ga0207665_10033386
627 Ga0207665_10048291
628 Ga0207691_10186199
629 Ga0207711_10031833
630 Ga0207689_10002500
631 Ga0207661_10412398
632 Ga0207667_10114566
633 Ga0207667_10332331
634 Ga0207651_10718330
635 Ga0207640_10168577
636 Ga0207677_10053695
637 Ga0207677_10134674
638 Ga0207703_10012076
639 Ga0207703_10167927
640 Ga0207639_10328963
641 Ga0207702_10002510
642 Ga0207702_10137908
643 Ga0207702_10200246
644 Ga0207641_10022330
645 Ga0207641_10650570
646 Ga0207648_10282672
647 Ga0207648_10311658
648 Ga0207674_10044614
649 Ga0207675_100609027
650 Ga0265354_1002168
651 Ga0265356_1000376
652 Ga0265356_1005762
653 Ga0268266_10415626
654 Ga0268264_10046060
655 Ga0265322_10040400
656 Ga0265338_10001433
657 Ga0265338_10064605
658 Ga0265338_10079043
659 Ga0265338_10298223
660 Ga0265338_10581766
661 Ga0265762_1000311
662 Ga0265762_1002537
663 Ga0265770_1008911
664 Ga0265770_1009954
665 Ga0265760_10000390
666 Ga0265760_10000434
667 Ga0265760_10000553
668 Ga0265760_10003607
669 Ga0265760_10010574
670 Ga0265760_10017528
671 Ga0265340_10052639
672 Ga0265339_10036392
673 Ga0265339_10112703
674 Ga0265339_10129378
675 Ga0265339_10148124
676 Ga0265316_10029710
677 Ga0265316_10271528
678 Ga0265316_10282780
679 Ga0265314_10049537
680 Ga0265314_10056878
681 Ga0373923_0046721
682 Ga0373936_0131144
683 Ga0373936_0158878
684 Ga0373941_0036020
685 Ga0373943_0048890
686 Ga0373943_0346661
687 Ga0373946_0031768
688 Ga0316574_0384523
689 Ga0373935_0675735
690 Ga0373927_0027507
691 Ga0373927_0066913
692 Ga0373927_0209642
693 Ga0373933_0149123
694 Ga0373947_0012518
695 Ga0373937_0027196
696 Ga0373937_0933702
697 Ga0373925_0079077
698 Ga0373925_0148021
699 Ga0436364_0697912
700 Ga0400483_275173
701 Ga0436365_0817811
702 Ga0436363_0734583
703 Ga0436363_1079012
704 Ga0436363_1093435
705 Ga0436362_0697763
706 Ga0453683_0150422
707 Ga0451576_0132089
708 Ga0451576_0506652
709 Ga0451576_1007804
710 Ga0466967_0003157
711 Ga0466967_0240122
712 Ga0495653_0371177
713 Ga0495580_0005677
714 Ga0495580_0052827
715 Ga0495580_0191631
716 Ga0495582_0104842
717 Ga0495630_0118618
718 Ga0495645_0263542
719 Ga0495635_0252660
720 Ga0495647_0026472
721 Ga0495658_0006517
722 Ga0495658_0011963
723 Ga0495669_0004965
724 Ga0495669_0174395
725 Ga0495600_0320283
726 Ga0495674_0078526
727 Ga0495674_0087772
728 Ga0495602_0126555
729 Ga0495602_0205806
730 Ga0496100_0181400
731 Ga0496101_0429740
732 Ga0496105_0233843
733 Ga0496108_0108781
734 Ga0496109_0097758
735 Ga0496109_0206446
736 Ga0496110_0014240
737 Ga0496112_0056891
738 Ga0496112_0091257
739 Ga0496112_0176301
740 Ga0496112_0582045
741 Ga0496113_0091211
742 Ga0496115_0588385
743 Ga0501069_0401325
744 nmdc:mga05p37_212474_c1
745 nmdc:mga0n895_13548_c1
746 nmdc:mga0n895_482_c1
747 nmdc:mga0n895_5946_c1
748 nmdc:mga0rr50_1340_c1
749 nmdc:mga0rr50_146726_c1
750 nmdc:mga0rr50_2317_c2
751 nmdc:mga0rr50_30499_c1
752 nmdc:mga08x19_2268_c1
753 nmdc:mga08x19_23979_c1
754 nmdc:mga08x19_29363_c1
755 nmdc:mga08x19_471327_c1
756 nmdc:mga0a205_107_c2
757 nmdc:mga0a205_171023_c1
758 Ga0495619_0177140
759 Ga0495619_0199918
760 Ga0500590_051093

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01694

Rhomboid

Rhomboid family

108

268

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3odj-assembly1.cif.gz_A crystal structure of h. influenzae rhomboid glpg with disordered loop 4, helix 5 and loop 5 0.842 16 218
6pjq-assembly1.cif.gz_A time-resolved structural snapshot of proteolysis by glpg inside the membrane 0.7754 10 218
2nr9-assembly1.cif.gz_A crystal structure of glpg, rhomboid peptidase from haemophilus influenzae 0.7659 16 218
6pjr-assembly1.cif.gz_A time-resolved structural snapshot of proteolysis by glpg inside the membrane 0.764 12 218
6pju-assembly1.cif.gz_A time-resolved structural snapshot of proteolysis by glpg inside the membrane 0.7601 12 218
ID Description Score Start End Superfamily
3odjA00 Mainly Alpha;Up-down Bundle;Rhomboid-like fold;Rhomboid-like 0.842 16 218 1.20.1540.10
af_F1R9M8_118_305_1.20.1540.10 Mainly Alpha;Up-down Bundle;Rhomboid-like fold;Rhomboid-like 0.7799 13 217 1.20.1540.10
af_O53632_31_206_1.20.1540.10 Mainly Alpha;Up-down Bundle;Rhomboid-like fold;Rhomboid-like 0.7688 8 220 1.20.1540.10
2nr9A00 Mainly Alpha;Up-down Bundle;Rhomboid-like fold;Rhomboid-like 0.7659 16 218 1.20.1540.10
af_O53632_31_206_1.20.1540.10 Mainly Alpha;Up-down Bundle;Rhomboid-like fold;Rhomboid-like 0.762 8 220 1.20.1540.10
ID Description Score Start End GO Terms
AF-A0A1F2QPD5-F1-model_v4 Rhomboid family intramembrane serine protease 0.9687 1 161 GO:0004252
GO:0006508
GO:0016020
AF-A0A537IWD0-F1-model_v4 Rhomboid family intramembrane serine protease 0.9574 1 158 GO:0004252
GO:0006508
GO:0016020
AF-A0A1F2QPD5-F1-model_v4 Rhomboid family intramembrane serine protease 0.957 1 161 GO:0004252
GO:0006508
GO:0016020
AF-A0A6M0C9Y5-F1-model_v4 Rhomboid family intramembrane serine protease 0.9554 1 173 GO:0004252
GO:0006508
GO:0016020
AF-A0A6M0C9Y5-F1-model_v4 Rhomboid family intramembrane serine protease 0.9447 1 173 GO:0004252
GO:0006508
GO:0016020

Map