F425696

General Info

Members Datasets Scaffolds Average Seq Length
371 186 742 414

Family's Representative Sequence

Representative Sequence 3300006177|Ga0075362_10008078|Ga0075362_100080782
Length 433
Sequence MSAGTTMMKKVLYTLAGLVGLAVAGVLFVLFRAAGDDTGPPPSITAKLAPAEKIARGAYLAKAGDCMACHTTRGGRQYAGGRALKTPFGSVISPNITSDKATGIGGWSADDFWLALHNGKSKDGRLLYPAFPYTNRDDSDALHAYFQSVPAVSQANRPHELRFPYNQQFMLAAWRALYFKPAVFRPETGQSMDWNRGAYLVQGLGHCSACHSPRNALGAVSGSSGDSLSGGLIPVLGWYAPSLNSDAEAGLGDWRQEHITALLKTGVSPRATVFGPMAEVVRESLQHLSDSDINAMAVYLRALPAQGVKSEFERDKGAQATAFLTAGGKLYEQHCAECHGAGGAGMPPGYPPLAGNRALTMEQAVNPIRIVLNGGFAPGTAGNPRPYSMPPFGHVLNDAEVAQVVSYLRSAWGNNAPPVDGNEVNRYRAIPLD

Samples

Sample ID Description Type Environment
1 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
11 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
12 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
13 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
14 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
17 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
18 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
19 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
20 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
26 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
45 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
46 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
50 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
54 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
58 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
59 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
63 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
79 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
80 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
90 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
94 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
95 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
99 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
100 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
101 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
102 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
103 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
104 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
105 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
109 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
110 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
111 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
112 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
113 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
114 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
115 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
116 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
117 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
118 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
119 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
120 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
121 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
122 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
125 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
126 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
127 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
128 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
129 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
130 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
131 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
132 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
133 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
134 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
139 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
140 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
141 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
142 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
155 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
156 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
157 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
160 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
161 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
162 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
163 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
164 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
165 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
166 2643221638 Duganella sp. Root336D2 Isolate Unclassified
167 2643221645 Massilia sp. Root351 Isolate Unclassified
168 2643221664 Massilia sp. Root418 Isolate Unclassified
169 2738541280 Massilia sp. GV090 Isolate Unclassified
170 2738541297 Duganella sp. GV083 Isolate Unclassified
171 2738541300 Massilia sp. GV016 Isolate Unclassified
172 2738541357 Duganella sp. GV053 Isolate Unclassified
173 2738543003 Duganella sp. GV066 Isolate Unclassified
174 2738543018 Massilia sp. GV045 Isolate Unclassified
175 2738543026 Duganella sp. GV089 Isolate Unclassified
176 2738543029 Duganella sp. GV039 Isolate Unclassified
177 2738543030 Massilia sp. GV097 Isolate Unclassified
178 2821131069 Duganella sp. 1224 Isolate Unclassified
179 2842711865 Duganella sp. R-73148 Isolate Unclassified
180 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
181 2857558681 Duganella sp. R-74565 Isolate Unclassified
182 2857564685 Duganella sp. R-74599 Isolate Unclassified
183 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
184 2904424332 Duganella sp. 1411 Isolate Rhizosphere
185 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
186 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.8
Metatranscriptomes 0
Isolates 6.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.88
Nodule 0.54
Rhizoplane 0.81
Rhizosphere 62.8
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075362_10008078 3300006177 Bacteria 4010
2 JGI25154J39366_1001352 3300002738 Bacteria 8977
3 JGI25154J39366_1006716 3300002738 Bacteria 1651
4 JGI25157J39369_1000082 3300002741 Bacteria 84303
5 JGI25152J39213_1000003 3300002773 Bacteria 214804
6 JGI25150J39212_1001090 3300002774 Bacteria 8196
7 JGI25159J45721_1005207 3300002987 Bacteria 4117
8 JGI25159J45721_1005873 3300002987 Bacteria 3782
9 JGI25159J45721_1012771 3300002987 Bacteria 1981
10 rootL2_10137927 3300003322 Bacteria 3754
11 rootL2_10183717 3300003322 Bacteria 2656
12 rootH1_10031534 3300003323 Bacteria 7119
13 JGI25160J50197_1008879 3300003354 Bacteria 3782
14 JGI25161J50226_1001729 3300003374 Bacteria 6188
15 JGI25161J50226_1002341 3300003374 Bacteria 4906
16 Ga0055539_1000280 3300003752 Bacteria 29407
17 Ga0055539_1001433 3300003752 Bacteria 4465
18 Ga0055533_1000043 3300003756 Bacteria 229262
19 Ga0055535_1009063 3300003761 Bacteria 1743
20 Ga0055529_1000051 3300003763 Bacteria 205006
21 Ga0055526_1000219 3300003771 Bacteria 49669
22 Ga0055526_1000220 3300003771 Bacteria 49269
23 Ga0055526_1000593 3300003771 Bacteria 28490
24 Ga0055526_1002519 3300003771 Bacteria 12315
25 Ga0055526_1010018 3300003771 Bacteria 4468
26 Ga0055537_1000022 3300003773 Bacteria 114484
27 Ga0055537_1007539 3300003773 Bacteria 2614
28 Ga0055524_1000050 3300003775 Bacteria 149338
29 Ga0055524_1000480 3300003775 Bacteria 31434
30 Ga0055524_1001744 3300003775 Bacteria 12025
31 Ga0055524_1007471 3300003775 Bacteria 4633
32 Ga0055524_1009553 3300003775 Bacteria 3932
33 Ga0055534_1003126 3300003784 Bacteria 5366
34 Ga0055534_1004319 3300003784 Bacteria 4160
35 Ga0055528_1000037 3300003790 Bacteria 116318
36 Ga0055528_1006084 3300003790 Bacteria 5516
37 Ga0055530_10000319 3300003791 Bacteria 43619
38 Ga0055530_10002804 3300003791 Bacteria 10722
39 Ga0055530_10002909 3300003791 Bacteria 10378
40 Ga0055531_10001054 3300003794 Bacteria 21746
41 Ga0055543_1000407 3300004625 Bacteria 27176
42 Ga0065165_1000051 3300005262 Bacteria 194844
43 Ga0065165_1000820 3300005262 Bacteria 41193
44 Ga0065165_1032495 3300005262 Bacteria 1635
45 Ga0070658_10126720 3300005327 Bacteria 2126
46 Ga0070683_100155198 3300005329 Bacteria 2171
47 Ga0070690_100027652 3300005330 Bacteria 3507
48 Ga0070660_100022038 3300005339 Bacteria 4707
49 Ga0070660_100127218 3300005339 Bacteria 2036
50 Ga0070659_100034270 3300005366 Bacteria 3948
51 Ga0068855_100026784 3300005563 Bacteria 6898
52 Ga0068857_100006079 3300005577 Bacteria 10309
53 Ga0068857_100180928 3300005577 Bacteria 1919
54 Ga0068856_100001614 3300005614 Bacteria 23593
55 Ga0068861_100023470 3300005719 Bacteria 4449
56 Ga0075366_10122769 3300006195 Bacteria 1566
57 Ga0075370_10003202 3300006353 Bacteria 7750
58 Ga0099826_10000001 3300006948 Bacteria 1155201
59 Ga0105244_10001646 3300009036 Bacteria 17689
60 Ga0105244_10011116 3300009036 Bacteria 5421
61 Ga0105240_10024884 3300009093 Bacteria 7881
62 Ga0105238_10023156 3300009551 Bacteria 6334
63 Ga0105249_10233630 3300009553 Bacteria 1814
64 Ga0105246_10207348 3300011119 Bacteria 1528
65 Ga0157369_10006014 3300013105 Bacteria 14098
66 Ga0157378_10027257 3300013297 Bacteria 5042
67 Ga0182008_10005754 3300014497 Bacteria 7015
68 Ga0182006_1000053 3300015261 Bacteria 180648
69 Ga0182007_10000075 3300015262 Bacteria 77567
70 Ga0182005_1000031 3300015265 Bacteria 202902
71 Ga0163161_10022757 3300017792 Bacteria 4415
72 Ga0213872_10000088 3300021361 Bacteria 83921
73 Ga0213872_10000279 3300021361 Bacteria 43537
74 Ga0209436_100714 3300025208 Bacteria 13922
75 Ga0209436_101162 3300025208 Bacteria 9697
76 Ga0209674_100067 3300025226 Bacteria 253824
77 Ga0209563_100068 3300025230 Bacteria 254802
78 Ga0209258_100813 3300025242 Bacteria 17939
79 Ga0207425_1000014 3300025245 Bacteria 481113
80 Ga0207425_1000173 3300025245 Bacteria 52861
81 Ga0207425_1000313 3300025245 Bacteria 35023
82 Ga0207425_1009338 3300025245 Bacteria 2444
83 Ga0209646_1000072 3300025246 Bacteria 224823
84 Ga0209646_1000198 3300025246 Bacteria 72654
85 Ga0209026_1000004 3300025250 Bacteria 949012
86 Ga0209677_100049 3300025253 Bacteria 180721
87 Ga0209677_100260 3300025253 Bacteria 35657
88 Ga0209759_1000003 3300025256 Bacteria 792130
89 Ga0209759_1000978 3300025256 Bacteria 19762
90 Ga0209129_1000017 3300025258 Bacteria 480935
91 Ga0209129_1001978 3300025258 Bacteria 10671
92 Ga0209565_1000015 3300025263 Bacteria 494091
93 Ga0209565_1000577 3300025263 Bacteria 24928
94 Ga0209565_1001098 3300025263 Bacteria 13364
95 Ga0209565_1001109 3300025263 Bacteria 13204
96 Ga0209565_1005524 3300025263 Bacteria 3656
97 Ga0209455_1000044 3300025272 Bacteria 410787
98 Ga0209673_1000017 3300025273 Bacteria 492994
99 Ga0209673_1004396 3300025273 Bacteria 7569
100 Ga0209130_1000063 3300025284 Bacteria 198142
101 Ga0209130_1000581 3300025284 Bacteria 35580
102 Ga0209130_1001321 3300025284 Bacteria 16908
103 Ga0209675_1000012 3300025291 Bacteria 494061
104 Ga0209675_1000207 3300025291 Bacteria 61880
105 Ga0209675_1000610 3300025291 Bacteria 25610
106 Ga0209675_1000647 3300025291 Bacteria 24647
107 Ga0209564_1000007 3300025295 Bacteria 1028582
108 Ga0209564_1000016 3300025295 Bacteria 613131
109 Ga0209564_1000071 3300025295 Bacteria 301332
110 Ga0209564_1000072 3300025295 Bacteria 289331
111 Ga0209564_1001400 3300025295 Bacteria 25052
112 Ga0209564_1013432 3300025295 Bacteria 3481
113 Ga0209758_1000038 3300025297 Bacteria 433771
114 Ga0209758_1001504 3300025297 Bacteria 27114
115 Ga0209050_1000011 3300025298 Bacteria 914037
116 Ga0209050_1000418 3300025298 Bacteria 78617
117 Ga0209050_1003109 3300025298 Bacteria 12723
118 Ga0209256_1000005 3300025299 Bacteria 1315082
119 Ga0209256_1000076 3300025299 Bacteria 234735
120 Ga0209256_1000118 3300025299 Bacteria 168228
121 Ga0209256_1000446 3300025299 Bacteria 63058
122 Ga0209256_1001324 3300025299 Bacteria 26461
123 Ga0209256_1001862 3300025299 Bacteria 19490
124 Ga0207426_1018211 3300025302 Bacteria 2479
125 Ga0209257_1000003 3300025304 Bacteria 1702593
126 Ga0209257_1003050 3300025304 Bacteria 15106
127 Ga0207655_1010395 3300025728 Bacteria 5645
128 Ga0207705_10031349 3300025909 Bacteria 3794
129 Ga0207695_10007496 3300025913 Bacteria 13854
130 Ga0207694_10101823 3300025924 Bacteria 2276
131 Ga0207661_10087100 3300025944 Bacteria 2593
132 Ga0207667_10015852 3300025949 Bacteria 8540
133 Ga0207702_10000525 3300026078 Bacteria 42984
134 Ga0207674_10008772 3300026116 Bacteria 11644
135 Ga0207674_10149412 3300026116 Bacteria 2294
136 Ga0209282_1000001 3300027666 Bacteria 2450367
137 Ga0316177_1050119 3300030731 Bacteria 2488
138 Ga0316181_1288357 3300030744 Bacteria 2881
139 Ga0307408_100000443 3300031548 Bacteria 36595
140 Ga0307408_100002108 3300031548 Bacteria 14315
141 Ga0307408_100012302 3300031548 Bacteria 5665
142 Ga0265314_10027256 3300031711 Bacteria 4280
143 Ga0307414_10003027 3300032004 Bacteria 8913
144 Ga0395905_0068127 3300037471 Bacteria 3334
145 Ga0436361_0751748 3300039447 Bacteria 4835
146 Ga0436361_0795799 3300039447 Bacteria 83096
147 Ga0436361_0815531 3300039447 Bacteria 1436
148 Ga0436361_0925120 3300039447 Bacteria 3109
149 Ga0466965_0020049 3300044683 Bacteria 3212
150 Ga0466961_0012662 3300044693 Bacteria 5402
151 Ga0466963_0012696 3300044694 Bacteria 5158
152 Ga0466970_0011456 3300044765 Bacteria 4520
153 Ga0466960_0015281 3300044901 Bacteria 3307
154 Ga0466959_0000301 3300045049 Bacteria 29334
155 Ga0466967_0106556 3300045976 Bacteria 2569
156 Ga0495617_000004 3300046452 Bacteria 511274
157 Ga0495617_000152 3300046452 Bacteria 44579
158 Ga0495617_010055 3300046452 Bacteria 3243
159 Ga0495627_000005 3300046453 Bacteria 630805
160 Ga0495590_0000006 3300046457 Bacteria 372949
161 Ga0495590_0010717 3300046457 Bacteria 3436
162 Ga0495629_0005575 3300046459 Bacteria 9396
163 Ga0495638_0000333 3300046460 Bacteria 59483
164 Ga0495638_0013091 3300046460 Bacteria 5662
165 Ga0495638_0014100 3300046460 Bacteria 5412
166 Ga0495638_0042685 3300046460 Bacteria 2864
167 Ga0495638_0080566 3300046460 Bacteria 1978
168 Ga0495653_0000004 3300046463 Bacteria 376003
169 Ga0495653_0054911 3300046463 Bacteria 3042
170 Ga0495650_0000042 3300046471 Bacteria 357244
171 Ga0495650_0000086 3300046471 Bacteria 235224
172 Ga0495650_0000137 3300046471 Bacteria 171680
173 Ga0495650_0002926 3300046471 Bacteria 12969
174 Ga0495650_0004106 3300046471 Bacteria 10162
175 Ga0495650_0024497 3300046471 Bacteria 2848
176 Ga0495605_0000022 3300046474 Bacteria 248321
177 Ga0495605_0003445 3300046474 Bacteria 9407
178 Ga0495584_0000003 3300046491 Bacteria 323768
179 Ga0495584_0000341 3300046491 Bacteria 32350
180 Ga0495584_0000597 3300046491 Bacteria 24296
181 Ga0495584_0064649 3300046491 Bacteria 1839
182 Ga0495585_0000010 3300046492 Bacteria 229958
183 Ga0495585_0000492 3300046492 Bacteria 37424
184 Ga0495585_0001692 3300046492 Bacteria 16851
185 Ga0495585_0006790 3300046492 Bacteria 7065
186 Ga0495585_0024032 3300046492 Bacteria 3495
187 Ga0495585_0025618 3300046492 Bacteria 3376
188 Ga0495596_0001972 3300046500 Bacteria 11323
189 Ga0495596_0002226 3300046500 Bacteria 10560
190 Ga0495607_0001831 3300046501 Bacteria 18117
191 Ga0495607_0004408 3300046501 Bacteria 10373
192 Ga0495607_0034229 3300046501 Bacteria 3083
193 Ga0495607_0041551 3300046501 Bacteria 2730
194 Ga0495583_0000475 3300046506 Bacteria 58746
195 Ga0495583_0000644 3300046506 Bacteria 46048
196 Ga0495583_0000666 3300046506 Bacteria 44971
197 Ga0495583_0006026 3300046506 Bacteria 8033
198 Ga0495606_0000039 3300046507 Bacteria 224632
199 Ga0495606_0000376 3300046507 Bacteria 75612
200 Ga0495606_0000953 3300046507 Bacteria 42573
201 Ga0495606_0001153 3300046507 Bacteria 37464
202 Ga0495606_0006231 3300046507 Bacteria 11077
203 Ga0495606_0006280 3300046507 Bacteria 11022
204 Ga0495606_0009818 3300046507 Bacteria 8039
205 Ga0495606_0010138 3300046507 Bacteria 7863
206 Ga0495606_0044264 3300046507 Bacteria 2962
207 Ga0495610_0000010 3300046512 Bacteria 538821
208 Ga0495610_0002554 3300046512 Bacteria 15154
209 Ga0495610_0003671 3300046512 Bacteria 11797
210 Ga0495610_0004305 3300046512 Bacteria 10573
211 Ga0495610_0021731 3300046512 Bacteria 3522
212 Ga0495610_0025361 3300046512 Bacteria 3183
213 Ga0495616_0001802 3300046513 Bacteria 14546
214 Ga0495616_0002676 3300046513 Bacteria 11683
215 Ga0495616_0004727 3300046513 Bacteria 8537
216 Ga0495616_0008234 3300046513 Bacteria 6188
217 Ga0495616_0069847 3300046513 Bacteria 1701
218 Ga0495632_0033817 3300046519 Bacteria 2621
219 Ga0495632_0069041 3300046519 Bacteria 1702
220 Ga0495637_0000056 3300046520 Bacteria 98978
221 Ga0495643_0000358 3300046522 Bacteria 62194
222 Ga0495643_0000379 3300046522 Bacteria 59082
223 Ga0495643_0051744 3300046522 Bacteria 2208
224 Ga0495643_0128012 3300046522 Bacteria 1277
225 Ga0495644_0000598 3300046523 Bacteria 15123
226 Ga0495644_0004123 3300046523 Bacteria 5709
227 Ga0495648_0000003 3300046524 Bacteria 386817
228 Ga0495648_0000054 3300046524 Bacteria 159674
229 Ga0495648_0001812 3300046524 Bacteria 20585
230 Ga0495648_0003405 3300046524 Bacteria 13979
231 Ga0495648_0014878 3300046524 Bacteria 5669
232 Ga0495648_0136449 3300046524 Bacteria 1296
233 Ga0495663_0001572 3300046525 Bacteria 7159
234 Ga0495642_0000656 3300046528 Bacteria 17318
235 Ga0495642_0004791 3300046528 Bacteria 5234
236 Ga0495654_0000002 3300046530 Bacteria 1021205
237 Ga0495654_0002447 3300046530 Bacteria 11946
238 Ga0495654_0043231 3300046530 Bacteria 2234
239 Ga0495609_0000447 3300046538 Bacteria 33815
240 Ga0495609_0001304 3300046538 Bacteria 17005
241 Ga0495609_0001673 3300046538 Bacteria 14405
242 Ga0495609_0012661 3300046538 Bacteria 3999
243 Ga0495597_0000191 3300046542 Bacteria 55786
244 Ga0495597_0000678 3300046542 Bacteria 27651
245 Ga0495597_0021079 3300046542 Bacteria 3031
246 Ga0495597_0024882 3300046542 Bacteria 2760
247 Ga0495597_0029098 3300046542 Bacteria 2524
248 Ga0495622_0000038 3300046557 Bacteria 119397
249 Ga0495622_0000698 3300046557 Bacteria 19035
250 Ga0495622_0009013 3300046557 Bacteria 4620
251 Ga0495633_0000031 3300046558 Bacteria 196727
252 Ga0495633_0001744 3300046558 Bacteria 16191
253 Ga0495633_0001940 3300046558 Bacteria 15037
254 Ga0495633_0005202 3300046558 Bacteria 8033
255 Ga0495633_0006109 3300046558 Bacteria 7213
256 Ga0495633_0006273 3300046558 Bacteria 7086
257 Ga0495633_0016497 3300046558 Bacteria 3807
258 Ga0495668_0000089 3300046616 Bacteria 145477
259 Ga0495668_0000303 3300046616 Bacteria 67905
260 Ga0495668_0001151 3300046616 Bacteria 27068
261 Ga0495668_0005128 3300046616 Bacteria 9006
262 Ga0495668_0006565 3300046616 Bacteria 7593
263 Ga0495668_0012469 3300046616 Bacteria 5039
264 Ga0495611_0019385 3300046648 Bacteria 2921
265 Ga0495611_0027010 3300046648 Bacteria 2507
266 Ga0495625_0000491 3300046660 Bacteria 59427
267 Ga0495625_0000558 3300046660 Bacteria 54572
268 Ga0495625_0005229 3300046660 Bacteria 11947
269 Ga0495625_0040604 3300046660 Bacteria 3391
270 Ga0495625_0069958 3300046660 Bacteria 2465
271 Ga0495625_0208632 3300046660 Bacteria 1285
272 Ga0495659_0000047 3300046664 Bacteria 55056
273 Ga0495659_0000960 3300046664 Bacteria 10173
274 Ga0495659_0001041 3300046664 Bacteria 9683
275 Ga0495661_0012739 3300046665 Bacteria 5674
276 Ga0495661_0012774 3300046665 Bacteria 5667
277 Ga0495661_0046622 3300046665 Bacteria 2645
278 Ga0495661_0059123 3300046665 Bacteria 2282
279 Ga0495588_0045422 3300046674 Bacteria 2251
280 Ga0495669_0008985 3300046684 Bacteria 4211
281 Ga0495669_0095241 3300046684 Bacteria 1378
282 Ga0495670_0007485 3300046691 Bacteria 5365
283 Ga0495670_0053713 3300046691 Bacteria 2018
284 Ga0495671_0000002 3300046692 Bacteria 1136189
285 Ga0495671_0000101 3300046692 Bacteria 78511
286 Ga0495649_0003102 3300046694 Bacteria 11373
287 Ga0495649_0011188 3300046694 Bacteria 5275
288 Ga0495649_0025842 3300046694 Bacteria 3269
289 Ga0495589_0023818 3300046794 Bacteria 3115
290 Ga0495660_0000597 3300046810 Bacteria 28558
291 Ga0495660_0001154 3300046810 Bacteria 18748
292 Ga0495660_0004839 3300046810 Bacteria 8121
293 Ga0495660_0006756 3300046810 Bacteria 6769
294 Ga0495660_0030944 3300046810 Bacteria 3012
295 Ga0495660_0044291 3300046810 Bacteria 2449
296 Ga0495636_0000913 3300047318 Bacteria 10978
297 Ga0495636_0001997 3300047318 Bacteria 7814
298 Ga0495672_0000031 3300047320 Bacteria 298258
299 Ga0495672_0000130 3300047320 Bacteria 111611
300 Ga0495672_0000461 3300047320 Bacteria 48032
301 Ga0495672_0026733 3300047320 Bacteria 3677
302 Ga0495676_0078217 3300047321 Bacteria 2519
303 Ga0495683_0000651 3300047323 Bacteria 25768
304 Ga0495683_0009027 3300047323 Bacteria 5313
305 Ga0495687_001334 3300047443 Bacteria 23017
306 Ga0495687_004860 3300047443 Bacteria 8825
307 Ga0495687_010968 3300047443 Bacteria 4913
308 Ga0495687_024051 3300047443 Bacteria 2901
309 Ga0495677_0000529 3300047445 Bacteria 15903
310 Ga0495677_0045124 3300047445 Bacteria 1616
311 Ga0495679_037806 3300047446 Bacteria 1516
312 Ga0495685_000286 3300047447 Bacteria 16900
313 Ga0495685_002252 3300047447 Bacteria 6011
314 Ga0495673_0000005 3300047469 Bacteria 943364
315 Ga0495673_0000026 3300047469 Bacteria 476378
316 Ga0495673_0000028 3300047469 Bacteria 473418
317 Ga0495673_0026049 3300047469 Bacteria 2801
318 Ga0495681_0004627 3300047470 Bacteria 9339
319 Ga0495681_0004741 3300047470 Bacteria 9216
320 Ga0495686_0000635 3300047472 Bacteria 48342
321 Ga0495686_0016577 3300047472 Bacteria 4994
322 Ga0495626_0031816 3300048091 Bacteria 2536
323 Ga0496103_0029532 3300048906 Bacteria 3332
324 Ga0496114_0059119 3300048917 Bacteria 3202
325 Ga0496117_0000032 3300048920 Bacteria 375533
326 Ga0496118_0000027 3300048921 Bacteria 375533
327 Ga0496121_0006384 3300048924 Bacteria 14674
328 Ga0496122_0002194 3300048925 Bacteria 28521
329 Ga0496122_0027732 3300048925 Bacteria 4832
330 Ga0496123_0000549 3300048926 Bacteria 64292
331 Ga0496125_0091886 3300048928 Bacteria 2272
332 Ga0496126_0009606 3300048929 Bacteria 10259
333 Ga0495678_001162 3300049459 Bacteria 21739
334 Ga0495678_002238 3300049459 Bacteria 13487
335 Ga0495678_004790 3300049459 Bacteria 7700
336 Ga0495678_017379 3300049459 Bacteria 3261
337 Ga0495682_0000398 3300049460 Bacteria 31324
338 Ga0495682_0003754 3300049460 Bacteria 6681
339 Ga0495682_0005313 3300049460 Bacteria 5370
340 Ga0501269_001316 3300049766 Bacteria 3304
341 nmdc:mga03683_9931_c1 3300050489 Bacteria 3400
342 nmdc:mga0k408_33366_c1 3300050493 Bacteria 2944
343 nmdc:mga07m45_2824_c1 3300050496 Bacteria 8217
344 Ga0500635_0000144 3300053080 Bacteria 40631
345 Ga0500594_0009810 3300053118 Bacteria 2212
346 Ga0500618_000880 3300053125 Bacteria 15941
347 Ga0500586_000150 3300053145 Bacteria 12733
348 Ga0500586_027717 3300053145 Bacteria 1843
349 2601671842 2600255292 Bacteria 6300551
350 2643791157 2643221554 Bacteria 6603920
351 2644215366 2643221638 Bacteria 6579467
352 2644252098 2643221645 Bacteria 7207331
353 2644360733 2643221664 Bacteria 7272945
354 2738740210 2738541280 Bacteria 6630198
355 2738829049 2738541297 Bacteria 6549566
356 2738843543 2738541300 Bacteria 6675882
357 2739152845 2738541357 Bacteria 6549408
358 2739194765 2738543003 Bacteria 6549560
359 2739275383 2738543018 Bacteria 6718814
360 2739321241 2738543026 Bacteria 6549408
361 2739339482 2738543029 Bacteria 6549249
362 2739344427 2738543030 Bacteria 6719714
363 2821133250 2821131069 Bacteria 6108407
364 2842717622 2842711865 Bacteria 7155354
365 2857552152 2857547612 Bacteria 6179999
366 2857563250 2857558681 Bacteria 6617694
367 2857567453 2857564685 Bacteria 6290584
368 2885082879 2885080285 Bacteria 6355622
369 2904427513 2904424332 Bacteria 7633521
370 2932413775 2932410948 Bacteria 6312192
371 2932417835 2932416698 Bacteria 6315112
372 Ga0075362_10008078
373 JGI25154J39366_1001352
374 JGI25154J39366_1006716
375 JGI25157J39369_1000082
376 JGI25152J39213_1000003
377 JGI25150J39212_1001090
378 JGI25159J45721_1005207
379 JGI25159J45721_1005873
380 JGI25159J45721_1012771
381 rootL2_10137927
382 rootL2_10183717
383 rootH1_10031534
384 JGI25160J50197_1008879
385 JGI25161J50226_1001729
386 JGI25161J50226_1002341
387 Ga0055539_1000280
388 Ga0055539_1001433
389 Ga0055533_1000043
390 Ga0055535_1009063
391 Ga0055529_1000051
392 Ga0055526_1000219
393 Ga0055526_1000220
394 Ga0055526_1000593
395 Ga0055526_1002519
396 Ga0055526_1010018
397 Ga0055537_1000022
398 Ga0055537_1007539
399 Ga0055524_1000050
400 Ga0055524_1000480
401 Ga0055524_1001744
402 Ga0055524_1007471
403 Ga0055524_1009553
404 Ga0055534_1003126
405 Ga0055534_1004319
406 Ga0055528_1000037
407 Ga0055528_1006084
408 Ga0055530_10000319
409 Ga0055530_10002804
410 Ga0055530_10002909
411 Ga0055531_10001054
412 Ga0055543_1000407
413 Ga0065165_1000051
414 Ga0065165_1000820
415 Ga0065165_1032495
416 Ga0070658_10126720
417 Ga0070683_100155198
418 Ga0070690_100027652
419 Ga0070660_100022038
420 Ga0070660_100127218
421 Ga0070659_100034270
422 Ga0068855_100026784
423 Ga0068857_100006079
424 Ga0068857_100180928
425 Ga0068856_100001614
426 Ga0068861_100023470
427 Ga0075366_10122769
428 Ga0075370_10003202
429 Ga0099826_10000001
430 Ga0105244_10001646
431 Ga0105244_10011116
432 Ga0105240_10024884
433 Ga0105238_10023156
434 Ga0105249_10233630
435 Ga0105246_10207348
436 Ga0157369_10006014
437 Ga0157378_10027257
438 Ga0182008_10005754
439 Ga0182006_1000053
440 Ga0182007_10000075
441 Ga0182005_1000031
442 Ga0163161_10022757
443 Ga0213872_10000088
444 Ga0213872_10000279
445 Ga0209436_100714
446 Ga0209436_101162
447 Ga0209674_100067
448 Ga0209563_100068
449 Ga0209258_100813
450 Ga0207425_1000014
451 Ga0207425_1000173
452 Ga0207425_1000313
453 Ga0207425_1009338
454 Ga0209646_1000072
455 Ga0209646_1000198
456 Ga0209026_1000004
457 Ga0209677_100049
458 Ga0209677_100260
459 Ga0209759_1000003
460 Ga0209759_1000978
461 Ga0209129_1000017
462 Ga0209129_1001978
463 Ga0209565_1000015
464 Ga0209565_1000577
465 Ga0209565_1001098
466 Ga0209565_1001109
467 Ga0209565_1005524
468 Ga0209455_1000044
469 Ga0209673_1000017
470 Ga0209673_1004396
471 Ga0209130_1000063
472 Ga0209130_1000581
473 Ga0209130_1001321
474 Ga0209675_1000012
475 Ga0209675_1000207
476 Ga0209675_1000610
477 Ga0209675_1000647
478 Ga0209564_1000007
479 Ga0209564_1000016
480 Ga0209564_1000071
481 Ga0209564_1000072
482 Ga0209564_1001400
483 Ga0209564_1013432
484 Ga0209758_1000038
485 Ga0209758_1001504
486 Ga0209050_1000011
487 Ga0209050_1000418
488 Ga0209050_1003109
489 Ga0209256_1000005
490 Ga0209256_1000076
491 Ga0209256_1000118
492 Ga0209256_1000446
493 Ga0209256_1001324
494 Ga0209256_1001862
495 Ga0207426_1018211
496 Ga0209257_1000003
497 Ga0209257_1003050
498 Ga0207655_1010395
499 Ga0207705_10031349
500 Ga0207695_10007496
501 Ga0207694_10101823
502 Ga0207661_10087100
503 Ga0207667_10015852
504 Ga0207702_10000525
505 Ga0207674_10008772
506 Ga0207674_10149412
507 Ga0209282_1000001
508 Ga0316177_1050119
509 Ga0316181_1288357
510 Ga0307408_100000443
511 Ga0307408_100002108
512 Ga0307408_100012302
513 Ga0265314_10027256
514 Ga0307414_10003027
515 Ga0395905_0068127
516 Ga0436361_0751748
517 Ga0436361_0795799
518 Ga0436361_0815531
519 Ga0436361_0925120
520 Ga0466965_0020049
521 Ga0466961_0012662
522 Ga0466963_0012696
523 Ga0466970_0011456
524 Ga0466960_0015281
525 Ga0466959_0000301
526 Ga0466967_0106556
527 Ga0495617_000004
528 Ga0495617_000152
529 Ga0495617_010055
530 Ga0495627_000005
531 Ga0495590_0000006
532 Ga0495590_0010717
533 Ga0495629_0005575
534 Ga0495638_0000333
535 Ga0495638_0013091
536 Ga0495638_0014100
537 Ga0495638_0042685
538 Ga0495638_0080566
539 Ga0495653_0000004
540 Ga0495653_0054911
541 Ga0495650_0000042
542 Ga0495650_0000086
543 Ga0495650_0000137
544 Ga0495650_0002926
545 Ga0495650_0004106
546 Ga0495650_0024497
547 Ga0495605_0000022
548 Ga0495605_0003445
549 Ga0495584_0000003
550 Ga0495584_0000341
551 Ga0495584_0000597
552 Ga0495584_0064649
553 Ga0495585_0000010
554 Ga0495585_0000492
555 Ga0495585_0001692
556 Ga0495585_0006790
557 Ga0495585_0024032
558 Ga0495585_0025618
559 Ga0495596_0001972
560 Ga0495596_0002226
561 Ga0495607_0001831
562 Ga0495607_0004408
563 Ga0495607_0034229
564 Ga0495607_0041551
565 Ga0495583_0000475
566 Ga0495583_0000644
567 Ga0495583_0000666
568 Ga0495583_0006026
569 Ga0495606_0000039
570 Ga0495606_0000376
571 Ga0495606_0000953
572 Ga0495606_0001153
573 Ga0495606_0006231
574 Ga0495606_0006280
575 Ga0495606_0009818
576 Ga0495606_0010138
577 Ga0495606_0044264
578 Ga0495610_0000010
579 Ga0495610_0002554
580 Ga0495610_0003671
581 Ga0495610_0004305
582 Ga0495610_0021731
583 Ga0495610_0025361
584 Ga0495616_0001802
585 Ga0495616_0002676
586 Ga0495616_0004727
587 Ga0495616_0008234
588 Ga0495616_0069847
589 Ga0495632_0033817
590 Ga0495632_0069041
591 Ga0495637_0000056
592 Ga0495643_0000358
593 Ga0495643_0000379
594 Ga0495643_0051744
595 Ga0495643_0128012
596 Ga0495644_0000598
597 Ga0495644_0004123
598 Ga0495648_0000003
599 Ga0495648_0000054
600 Ga0495648_0001812
601 Ga0495648_0003405
602 Ga0495648_0014878
603 Ga0495648_0136449
604 Ga0495663_0001572
605 Ga0495642_0000656
606 Ga0495642_0004791
607 Ga0495654_0000002
608 Ga0495654_0002447
609 Ga0495654_0043231
610 Ga0495609_0000447
611 Ga0495609_0001304
612 Ga0495609_0001673
613 Ga0495609_0012661
614 Ga0495597_0000191
615 Ga0495597_0000678
616 Ga0495597_0021079
617 Ga0495597_0024882
618 Ga0495597_0029098
619 Ga0495622_0000038
620 Ga0495622_0000698
621 Ga0495622_0009013
622 Ga0495633_0000031
623 Ga0495633_0001744
624 Ga0495633_0001940
625 Ga0495633_0005202
626 Ga0495633_0006109
627 Ga0495633_0006273
628 Ga0495633_0016497
629 Ga0495668_0000089
630 Ga0495668_0000303
631 Ga0495668_0001151
632 Ga0495668_0005128
633 Ga0495668_0006565
634 Ga0495668_0012469
635 Ga0495611_0019385
636 Ga0495611_0027010
637 Ga0495625_0000491
638 Ga0495625_0000558
639 Ga0495625_0005229
640 Ga0495625_0040604
641 Ga0495625_0069958
642 Ga0495625_0208632
643 Ga0495659_0000047
644 Ga0495659_0000960
645 Ga0495659_0001041
646 Ga0495661_0012739
647 Ga0495661_0012774
648 Ga0495661_0046622
649 Ga0495661_0059123
650 Ga0495588_0045422
651 Ga0495669_0008985
652 Ga0495669_0095241
653 Ga0495670_0007485
654 Ga0495670_0053713
655 Ga0495671_0000002
656 Ga0495671_0000101
657 Ga0495649_0003102
658 Ga0495649_0011188
659 Ga0495649_0025842
660 Ga0495589_0023818
661 Ga0495660_0000597
662 Ga0495660_0001154
663 Ga0495660_0004839
664 Ga0495660_0006756
665 Ga0495660_0030944
666 Ga0495660_0044291
667 Ga0495636_0000913
668 Ga0495636_0001997
669 Ga0495672_0000031
670 Ga0495672_0000130
671 Ga0495672_0000461
672 Ga0495672_0026733
673 Ga0495676_0078217
674 Ga0495683_0000651
675 Ga0495683_0009027
676 Ga0495687_001334
677 Ga0495687_004860
678 Ga0495687_010968
679 Ga0495687_024051
680 Ga0495677_0000529
681 Ga0495677_0045124
682 Ga0495679_037806
683 Ga0495685_000286
684 Ga0495685_002252
685 Ga0495673_0000005
686 Ga0495673_0000026
687 Ga0495673_0000028
688 Ga0495673_0026049
689 Ga0495681_0004627
690 Ga0495681_0004741
691 Ga0495686_0000635
692 Ga0495686_0016577
693 Ga0495626_0031816
694 Ga0496103_0029532
695 Ga0496114_0059119
696 Ga0496117_0000032
697 Ga0496118_0000027
698 Ga0496121_0006384
699 Ga0496122_0002194
700 Ga0496122_0027732
701 Ga0496123_0000549
702 Ga0496125_0091886
703 Ga0496126_0009606
704 Ga0495678_001162
705 Ga0495678_002238
706 Ga0495678_004790
707 Ga0495678_017379
708 Ga0495682_0000398
709 Ga0495682_0003754
710 Ga0495682_0005313
711 Ga0501269_001316
712 nmdc:mga03683_9931_c1
713 nmdc:mga0k408_33366_c1
714 nmdc:mga07m45_2824_c1
715 Ga0500635_0000144
716 Ga0500594_0009810
717 Ga0500618_000880
718 Ga0500586_000150
719 Ga0500586_027717
720 2601671842
721 2643791157
722 2644215366
723 2644252098
724 2644360733
725 2738740210
726 2738829049
727 2738843543
728 2739152845
729 2739194765
730 2739275383
731 2739321241
732 2739339482
733 2739344427
734 2821133250
735 2842717622
736 2857552152
737 2857563250
738 2857567453
739 2885082879
740 2904427513
741 2932413775
742 2932417835

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00034

Cytochrom_C

Cytochrome c

324

412

0.91

PF13442

Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

322

408

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
8gy2-assembly1.cif.gz_B cryo-em structure of membrane-bound alcohol dehydrogenase from gluconobacter oxydans 0.8553 38 409
8snh-assembly1.cif.gz_G cytochrome bc1-cbb3 supercomplex from pseudomonas aeruginosa 0.818 300 351
6qpv-assembly1.cif.gz_A crystal structure of as isolated y323a mutant of haem-cu containing nitrite reductase from ralstonia pickettii 0.808 300 408
7w2j-assembly1.cif.gz_C cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus 0.7893 45 408
8jek-assembly1.cif.gz_C cryo-em structure of k-ferricyanide oxidized membrane-bound fructose dehydrogenase from gluconobacter japonicus 0.7889 45 411
ID Description Score Start End Superfamily
1h9yA01 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.7861 301 391 1.10.760.10
5oboA03 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.7796 300 410 1.10.760.10
1mg2H00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.7717 298 388 1.10.760.10
1r0qA00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.7644 306 408 1.10.760.10
1hj3A01 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.7619 301 387 1.10.760.10
ID Description Score Start End GO Terms
AF-A0A848QHX9-F1-model_v4 deleted 0.9164 41 281
AF-A0A4Q3K9I5-F1-model_v4 deleted 0.9041 169 412
AF-A0A7X5UAQ9-F1-model_v4 C-type cytochrome 0.9024 39 410 GO:0005506
GO:0005886
GO:0009055
GO:0016614
GO:0020037
AF-A0A6J5DI98-F1-model_v4 Alcohol dehydrogenase (Quinone), cytochrome c subunit (EC 1.1.5.5) 0.9016 44 412 GO:0005506
GO:0005886
GO:0009055
GO:0016614
GO:0020037
AF-A0A4Q3K9I5-F1-model_v4 deleted 0.9005 169 412

Map