F422531

General Info

Members Datasets Scaffolds Average Seq Length
362 146 724 296

Family's Representative Sequence

Representative Sequence 3300005546|Ga0070696_100080900|Ga0070696_1000809003
Length 306
Sequence MENVDRDSLKLFRDIAQTRSFSRAAAMNDCSQSAASQQVQELERSLGTTLLDRSRRPLVVTPAGQLYAEFCRDVLRRRDELEAALGQLKHETGGTVRVASIYSVGLSEMVELEKQFAARRPEATLEVQYLQPAKVYAAVLADQADLGLVSYPHATREIKVIPWRQEEMVLATAPDHPLAKKAAAIRGAIPIEDLKGVDFVGFDEELPIRSDVDRFFKEKGVEVNVTVHFDNIEMIKEAVAHRVGVSIMPHRVMREDIRQKRLAAIRIAGASLYRPLGIIHRKKKRFQPAAQAFLDLLCEKPMPEAA

Samples

Sample ID Description Type Environment
1 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
63 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
102 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
107 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
108 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
109 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
110 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
111 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
112 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
113 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
123 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
124 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
128 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
129 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
130 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
131 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
132 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
146 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.28
Nodule 0
Rhizoplane 0.83
Rhizosphere 91.71
Stem 0
Stem Tuber 0
Unclassified 17.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070696_100080900 3300005546 Bacteria 2301
2 Ga0070683_100003062 3300005329 Bacteria 13451
3 Ga0070683_100025051 3300005329 Bacteria 5353
4 Ga0070683_100350387 3300005329 Unclassified 1406
5 Ga0070683_100390342 3300005329 Bacteria 1327
6 Ga0068869_100078802 3300005334 Bacteria 2454
7 Ga0068869_100188681 3300005334 Unclassified 1620
8 Ga0070666_10002895 3300005335 Bacteria 10362
9 Ga0070666_10153436 3300005335 Unclassified 1607
10 Ga0068868_100007515 3300005338 Bacteria 7763
11 Ga0068868_100061551 3300005338 Unclassified 2974
12 Ga0068868_100237664 3300005338 Unclassified 1530
13 Ga0070660_100083094 3300005339 Bacteria 2516
14 Ga0070691_10015710 3300005341 Bacteria 3478
15 Ga0070691_10239688 3300005341 Bacteria 968
16 Ga0070661_100056958 3300005344 Bacteria 2864
17 Ga0070661_100088988 3300005344 Bacteria 2286
18 Ga0070667_100112289 3300005367 Bacteria 2364
19 Ga0070667_100211228 3300005367 Bacteria 1725
20 Ga0070667_100324614 3300005367 Bacteria 1389
21 Ga0070709_10005677 3300005434 Bacteria 6762
22 Ga0070709_10028213 3300005434 Bacteria 3346
23 Ga0070714_100063754 3300005435 Bacteria 3170
24 Ga0070714_100087245 3300005435 Bacteria 2729
25 Ga0070714_100148283 3300005435 Bacteria 2112
26 Ga0070713_100058093 3300005436 Bacteria 3225
27 Ga0070713_100105717 3300005436 Bacteria 2446
28 Ga0070713_100289708 3300005436 Bacteria 1504
29 Ga0070711_100063602 3300005439 Bacteria 2576
30 Ga0070711_100110640 3300005439 Bacteria 2016
31 Ga0070662_100027976 3300005457 Bacteria 3920
32 Ga0070681_10008180 3300005458 Bacteria 10238
33 Ga0070681_10029391 3300005458 Bacteria 5519
34 Ga0070681_10062572 3300005458 Bacteria 3695
35 Ga0070681_10247632 3300005458 Unclassified 1695
36 Ga0068867_100004965 3300005459 Bacteria 9373
37 Ga0070679_100011620 3300005530 Bacteria 8391
38 Ga0070679_100513179 3300005530 Unclassified 1142
39 Ga0070684_100002507 3300005535 Bacteria 13526
40 Ga0068853_100034437 3300005539 Bacteria 4299
41 Ga0068853_100186353 3300005539 Bacteria 1884
42 Ga0068853_100660132 3300005539 Unclassified 996
43 Ga0070695_100125771 3300005545 Bacteria 1760
44 Ga0070695_100194046 3300005545 Bacteria 1447
45 Ga0070693_100079460 3300005547 Bacteria 1952
46 Ga0070665_100061415 3300005548 Bacteria 3767
47 Ga0070665_100162449 3300005548 Bacteria 2236
48 Ga0068855_100011816 3300005563 Bacteria 10558
49 Ga0068855_100027571 3300005563 Bacteria 6794
50 Ga0068855_100083411 3300005563 Bacteria 3702
51 Ga0068855_100259263 3300005563 Unclassified 1937
52 Ga0068855_100455809 3300005563 Unclassified 1395
53 Ga0068855_100469585 3300005563 Bacteria 1371
54 Ga0068857_100003901 3300005577 Bacteria 12554
55 Ga0068857_100005231 3300005577 Bacteria 11048
56 Ga0068857_100006378 3300005577 Bacteria 10107
57 Ga0068857_100045199 3300005577 Bacteria 3906
58 Ga0068857_100222244 3300005577 Bacteria 1725
59 Ga0068856_100001855 3300005614 Bacteria 22069
60 Ga0068856_100004699 3300005614 Bacteria 13562
61 Ga0068856_100013966 3300005614 Bacteria 7766
62 Ga0068856_100085504 3300005614 Bacteria 3133
63 Ga0068856_100137228 3300005614 Bacteria 2452
64 Ga0068856_100234639 3300005614 Unclassified 1850
65 Ga0068859_100028419 3300005617 Bacteria 5605
66 Ga0068859_100206905 3300005617 Bacteria 2048
67 Ga0068859_100346590 3300005617 Bacteria 1580
68 Ga0068864_100038205 3300005618 Bacteria 4099
69 Ga0068864_100216809 3300005618 Bacteria 1764
70 Ga0068863_100059442 3300005841 Bacteria 3616
71 Ga0068858_100005380 3300005842 Bacteria 12549
72 Ga0068858_100025944 3300005842 Bacteria 5450
73 Ga0068858_100029538 3300005842 Bacteria 5090
74 Ga0068860_100364460 3300005843 Bacteria 1424
75 Ga0068860_100480070 3300005843 Bacteria 1239
76 Ga0081455_10068776 3300005937 Bacteria 2946
77 Ga0097621_100021745 3300006237 Bacteria 4969
78 Ga0097621_100029406 3300006237 Bacteria 4339
79 Ga0097621_100139928 3300006237 Unclassified 2068
80 Ga0097621_100193879 3300006237 Bacteria 1761
81 Ga0068871_100004229 3300006358 Bacteria 9943
82 Ga0068871_100011929 3300006358 Bacteria 6396
83 Ga0068871_100068609 3300006358 Unclassified 2911
84 Ga0068871_100098035 3300006358 Bacteria 2452
85 Ga0068865_100028881 3300006881 Bacteria 3675
86 Ga0068865_100092673 3300006881 Bacteria 2195
87 Ga0097620_100028420 3300006931 Bacteria 5605
88 Ga0097620_100206899 3300006931 Bacteria 2048
89 Ga0097620_100346574 3300006931 Bacteria 1580
90 Ga0105240_10000438 3300009093 Bacteria 76903
91 Ga0105240_10001075 3300009093 Bacteria 48253
92 Ga0105240_10002574 3300009093 Bacteria 29072
93 Ga0105240_10013345 3300009093 Bacteria 11291
94 Ga0105240_10087048 3300009093 Bacteria 3826
95 Ga0105240_10107842 3300009093 Unclassified 3376
96 Ga0105240_10190009 3300009093 Bacteria 2415
97 Ga0105240_10269057 3300009093 Archaea 1963
98 Ga0105245_10015845 3300009098 Bacteria 6567
99 Ga0105245_10020617 3300009098 Bacteria 5780
100 Ga0105245_10022815 3300009098 Bacteria 5492
101 Ga0105245_10045488 3300009098 Bacteria 3920
102 Ga0105245_10069879 3300009098 Bacteria 3185
103 Ga0105245_10267219 3300009098 Bacteria 1667
104 Ga0105245_10417308 3300009098 Bacteria 1344
105 Ga0105245_10454011 3300009098 Unclassified 1291
106 Ga0105243_10008129 3300009148 Bacteria 8055
107 Ga0105243_10058441 3300009148 Bacteria 3073
108 Ga0105241_10012620 3300009174 Bacteria 6199
109 Ga0105241_10023034 3300009174 Bacteria 4617
110 Ga0105241_10098692 3300009174 Bacteria 2318
111 Ga0105241_10302754 3300009174 Bacteria 1373
112 Ga0105242_10042968 3300009176 Unclassified 3653
113 Ga0105242_10050023 3300009176 Unclassified 3402
114 Ga0105242_10134608 3300009176 Bacteria 2137
115 Ga0105242_10199475 3300009176 Bacteria 1777
116 Ga0105242_10260221 3300009176 Unclassified 1567
117 Ga0105242_10285294 3300009176 Bacteria 1501
118 Ga0105242_10302881 3300009176 Archaea 1460
119 Ga0105248_10012321 3300009177 Bacteria 9432
120 Ga0105248_10012973 3300009177 Bacteria 9185
121 Ga0105248_10021173 3300009177 Bacteria 7205
122 Ga0105248_10066991 3300009177 Unclassified 4031
123 Ga0105237_10002757 3300009545 Bacteria 21362
124 Ga0105237_10012673 3300009545 Bacteria 8874
125 Ga0105237_10037839 3300009545 Bacteria 4875
126 Ga0105237_10124844 3300009545 Bacteria 2568
127 Ga0105237_10147461 3300009545 Bacteria 2348
128 Ga0105237_10228599 3300009545 Unclassified 1861
129 Ga0105238_10005581 3300009551 Bacteria 12428
130 Ga0105238_10008202 3300009551 Bacteria 10448
131 Ga0105238_10018965 3300009551 Bacteria 7006
132 Ga0105238_10078170 3300009551 Unclassified 3300
133 Ga0105238_10401471 3300009551 Unclassified 1364
134 Ga0105249_10028171 3300009553 Bacteria 5072
135 Ga0105249_10224892 3300009553 Bacteria 1848
136 Ga0105249_10392806 3300009553 Unclassified 1416
137 Ga0105239_10009774 3300010375 Bacteria 10781
138 Ga0105239_10009858 3300010375 Bacteria 10730
139 Ga0105239_10086782 3300010375 Bacteria 3449
140 Ga0105239_10150857 3300010375 Bacteria 2594
141 Ga0105239_10241305 3300010375 Archaea 2028
142 Ga0105239_10357356 3300010375 Bacteria 1649
143 Ga0105246_10021533 3300011119 Bacteria 4149
144 Ga0105246_10073611 3300011119 Bacteria 2413
145 Ga0157373_10020898 3300013100 Bacteria 4752
146 Ga0157370_10008547 3300013104 Bacteria 11035
147 Ga0157370_10012054 3300013104 Bacteria 8999
148 Ga0157370_10069674 3300013104 Bacteria 3321
149 Ga0157369_10001600 3300013105 Bacteria 27714
150 Ga0157369_10008743 3300013105 Bacteria 11599
151 Ga0157369_10016526 3300013105 Bacteria 8297
152 Ga0157369_10023214 3300013105 Bacteria 6910
153 Ga0157369_10024335 3300013105 Bacteria 6738
154 Ga0157369_10096449 3300013105 Bacteria 3155
155 Ga0157369_10153662 3300013105 Bacteria 2432
156 Ga0157374_10003794 3300013296 Bacteria 12717
157 Ga0157374_10073813 3300013296 Bacteria 3220
158 Ga0157374_10075725 3300013296 Unclassified 3180
159 Ga0157374_10129618 3300013296 Unclassified 2440
160 Ga0157378_10002041 3300013297 Bacteria 18090
161 Ga0157378_10024655 3300013297 Bacteria 5296
162 Ga0157378_10172039 3300013297 Unclassified 2032
163 Ga0163162_10012007 3300013306 Bacteria 8447
164 Ga0163162_10079587 3300013306 Bacteria 3343
165 Ga0163162_10684937 3300013306 Unclassified 1147
166 Ga0163162_10818743 3300013306 Unclassified 1048
167 Ga0157372_10017925 3300013307 Bacteria 7609
168 Ga0157372_10032575 3300013307 Bacteria 5716
169 Ga0157372_10079883 3300013307 Bacteria 3700
170 Ga0157375_10049695 3300013308 Bacteria 4111
171 Ga0163163_10009154 3300014325 Bacteria 8826
172 Ga0163163_10018272 3300014325 Bacteria 6558
173 Ga0163163_10152187 3300014325 Bacteria 2357
174 Ga0163163_10923773 3300014325 Bacteria 936
175 Ga0157379_10110008 3300014968 Bacteria 2475
176 Ga0157376_10020647 3300014969 Bacteria 5101
177 Ga0157376_10135722 3300014969 Unclassified 2201
178 Ga0157376_10212770 3300014969 Bacteria 1786
179 Ga0157376_10252394 3300014969 Bacteria 1648
180 Ga0213873_10001641 3300021358 Bacteria 3739
181 Ga0213872_10028147 3300021361 Bacteria 2578
182 Ga0213874_10021379 3300021377 Bacteria 1784
183 Ga0213876_10029432 3300021384 Bacteria 2894
184 Ga0213876_10036792 3300021384 Unclassified 2582
185 Ga0213876_10133025 3300021384 Unclassified 1322
186 Ga0213875_10000057 3300021388 Bacteria 136082
187 Ga0213875_10015719 3300021388 Bacteria 3680
188 Ga0213875_10079082 3300021388 Archaea 1534
189 Ga0213875_10107801 3300021388 Bacteria 1300
190 Ga0207642_10132019 3300025899 Unclassified 1305
191 Ga0207680_10048755 3300025903 Unclassified 2517
192 Ga0207680_10131475 3300025903 Unclassified 1650
193 Ga0207699_10004346 3300025906 Bacteria 6779
194 Ga0207654_10007211 3300025911 Bacteria 5599
195 Ga0207654_10010439 3300025911 Bacteria 4729
196 Ga0207707_10000927 3300025912 Bacteria 28437
197 Ga0207695_10001584 3300025913 Bacteria 37018
198 Ga0207695_10001643 3300025913 Bacteria 36050
199 Ga0207695_10008595 3300025913 Bacteria 12758
200 Ga0207695_10014249 3300025913 Bacteria 9430
201 Ga0207695_10028656 3300025913 Bacteria 6166
202 Ga0207695_10046042 3300025913 Bacteria 4625
203 Ga0207695_10078405 3300025913 Bacteria 3352
204 Ga0207671_10038354 3300025914 Bacteria 3551
205 Ga0207671_10043149 3300025914 Bacteria 3335
206 Ga0207671_10048181 3300025914 Bacteria 3154
207 Ga0207671_10049708 3300025914 Bacteria 3104
208 Ga0207671_10127884 3300025914 Bacteria 1948
209 Ga0207671_10129692 3300025914 Bacteria 1934
210 Ga0207663_10059897 3300025916 Unclassified 2411
211 Ga0207657_10004110 3300025919 Bacteria 15452
212 Ga0207657_10038973 3300025919 Bacteria 4225
213 Ga0207657_10081856 3300025919 Bacteria 2711
214 Ga0207657_10215937 3300025919 Unclassified 1538
215 Ga0207649_10033353 3300025920 Unclassified 3076
216 Ga0207649_10047793 3300025920 Unclassified 2636
217 Ga0207649_10066549 3300025920 Bacteria 2285
218 Ga0207652_10010925 3300025921 Bacteria 7319
219 Ga0207652_10152067 3300025921 Unclassified 2073
220 Ga0207652_10439792 3300025921 Bacteria 1176
221 Ga0207694_10004295 3300025924 Bacteria 11151
222 Ga0207694_10007177 3300025924 Bacteria 8458
223 Ga0207694_10012265 3300025924 Bacteria 6458
224 Ga0207694_10047678 3300025924 Unclassified 3314
225 Ga0207694_10061675 3300025924 Bacteria 2918
226 Ga0207694_10100612 3300025924 Bacteria 2290
227 Ga0207694_10147026 3300025924 Bacteria 1897
228 Ga0207694_10380361 3300025924 Bacteria 1172
229 Ga0207687_10001871 3300025927 Bacteria 14483
230 Ga0207687_10077847 3300025927 Unclassified 2386
231 Ga0207687_10138082 3300025927 Unclassified 1846
232 Ga0207700_10066672 3300025928 Bacteria 2752
233 Ga0207700_10325835 3300025928 Bacteria 1332
234 Ga0207700_10432559 3300025928 Unclassified 1157
235 Ga0207664_10116760 3300025929 Unclassified 2227
236 Ga0207706_10085643 3300025933 Bacteria 2771
237 Ga0207686_10018150 3300025934 Bacteria 3978
238 Ga0207686_10055074 3300025934 Bacteria 2493
239 Ga0207686_10070213 3300025934 Unclassified 2250
240 Ga0207686_10081423 3300025934 Bacteria 2113
241 Ga0207686_10085298 3300025934 Bacteria 2071
242 Ga0207704_10015369 3300025938 Bacteria 3899
243 Ga0207711_10000564 3300025941 Bacteria 37778
244 Ga0207711_10074821 3300025941 Bacteria 2946
245 Ga0207689_10118071 3300025942 Unclassified 2181
246 Ga0207689_10126356 3300025942 Bacteria 2104
247 Ga0207661_10022115 3300025944 Bacteria 4782
248 Ga0207661_10026023 3300025944 Bacteria 4454
249 Ga0207679_10051767 3300025945 Bacteria 3007
250 Ga0207667_10000305 3300025949 Bacteria 67996
251 Ga0207667_10014431 3300025949 Bacteria 9007
252 Ga0207667_10030245 3300025949 Bacteria 5861
253 Ga0207667_10034680 3300025949 Bacteria 5417
254 Ga0207667_10111169 3300025949 Bacteria 2826
255 Ga0207667_10122279 3300025949 Bacteria 2682
256 Ga0207651_10025025 3300025960 Unclassified 3704
257 Ga0207712_10037666 3300025961 Bacteria 3301
258 Ga0207658_10093358 3300025986 Bacteria 2339
259 Ga0207658_10220527 3300025986 Bacteria 1595
260 Ga0207677_10044481 3300026023 Unclassified 2959
261 Ga0207677_10048102 3300026023 Unclassified 2869
262 Ga0207703_10007830 3300026035 Bacteria 8450
263 Ga0207703_10154218 3300026035 Bacteria 2005
264 Ga0207703_10384180 3300026035 Bacteria 1299
265 Ga0207639_10025614 3300026041 Bacteria 4278
266 Ga0207639_10083390 3300026041 Bacteria 2537
267 Ga0207639_10320240 3300026041 Unclassified 1377
268 Ga0207678_10029272 3300026067 Bacteria 4806
269 Ga0207702_10001949 3300026078 Bacteria 20122
270 Ga0207702_10071618 3300026078 Bacteria 2985
271 Ga0207702_10083849 3300026078 Bacteria 2774
272 Ga0207702_10104800 3300026078 Bacteria 2503
273 Ga0207702_10117935 3300026078 Unclassified 2371
274 Ga0207702_10242687 3300026078 Bacteria 1688
275 Ga0207641_10133719 3300026088 Bacteria 2230
276 Ga0207648_10015884 3300026089 Bacteria 6902
277 Ga0207648_10141700 3300026089 Bacteria 2119
278 Ga0207648_10585056 3300026089 Unclassified 1028
279 Ga0207676_10066495 3300026095 Bacteria 2876
280 Ga0207674_10002448 3300026116 Bacteria 23445
281 Ga0207674_10010643 3300026116 Bacteria 10402
282 Ga0207698_10028190 3300026142 Bacteria 4001
283 Ga0207698_10047064 3300026142 Bacteria 3263
284 Ga0268266_10004433 3300028379 Bacteria 13440
285 Ga0268266_10202678 3300028379 Bacteria 1816
286 Ga0268264_10033709 3300028381 Unclassified 4209
287 Ga0268264_10406488 3300028381 Bacteria 1309
288 Ga0265332_10030304 3300031238 Bacteria 2363
289 Ga0265340_10039428 3300031247 Bacteria 2331
290 Ga0265316_10136755 3300031344 Bacteria 1843
291 Ga0265313_10030061 3300031595 Bacteria 2802
292 Ga0265314_10001088 3300031711 Bacteria 31424
293 Ga0265314_10002013 3300031711 Bacteria 21586
294 Ga0373926_0002222 3300035083 Bacteria 6128
295 Ga0373934_0003854 3300035086 Bacteria 5517
296 Ga0373934_0040636 3300035086 Bacteria 1835
297 Ga0373944_0107938 3300035089 Unclassified 947
298 Ga0373923_0011000 3300035111 Bacteria 3309
299 Ga0373954_0001652 3300035118 Bacteria 9122
300 Ga0373954_0073666 3300035118 Bacteria 1625
301 Ga0373943_0108811 3300035170 Unclassified 1459
302 Ga0373955_0068547 3300035172 Bacteria 1977
303 Ga0373955_0171680 3300035172 Bacteria 1284
304 Ga0373935_0006400 3300035692 Bacteria 7026
305 Ga0373935_0082349 3300035692 Bacteria 2094
306 Ga0373927_0002292 3300035695 Bacteria 14012
307 Ga0373927_0047155 3300035695 Bacteria 2787
308 Ga0373927_0049240 3300035695 Bacteria 2725
309 Ga0373927_0326164 3300035695 Bacteria 1011
310 Ga0373933_0011588 3300035724 Bacteria 4864
311 Ga0373947_0004707 3300035725 Bacteria 7995
312 Ga0373937_0018018 3300036401 Bacteria 6298
313 Ga0373937_0039834 3300036401 Bacteria 4282
314 Ga0373937_0655023 3300036401 Unclassified 996
315 Ga0373925_0047385 3300037068 Bacteria 3199
316 Ga0436364_0248525 3300037853 Bacteria 3614
317 Ga0436364_0373559 3300037853 Bacteria 2266
318 Ga0436364_0455018 3300037853 Bacteria 3096
319 Ga0436364_0885511 3300037853 Bacteria 3141
320 Ga0436364_0962549 3300037853 Bacteria 2447
321 Ga0436364_1069869 3300037853 Unclassified 953
322 Ga0436364_1102754 3300037853 Bacteria 136103
323 Ga0436364_1121221 3300037853 Bacteria 3957
324 Ga0436364_1225448 3300037853 Bacteria 9973
325 Ga0436364_1257793 3300037853 Bacteria 1000
326 Ga0436364_1345352 3300037853 Unclassified 3099
327 Ga0436364_1518684 3300037853 Bacteria 4407
328 Ga0395901_0409613 3300038443 Bacteria 1392
329 Ga0436365_0291153 3300039437 Bacteria 3161
330 Ga0436365_1407879 3300039437 Bacteria 9820
331 Ga0436365_1426088 3300039437 Unclassified 4758
332 Ga0436360_0024446 3300039438 Bacteria 1722
333 Ga0436361_1038242 3300039447 Bacteria 3829
334 Ga0436363_0192962 3300039450 Bacteria 2450
335 Ga0436363_0197097 3300039450 Bacteria 1130
336 Ga0436363_0643185 3300039450 Bacteria 1322
337 Ga0436362_0054577 3300039453 Bacteria 6135
338 Ga0436362_0099289 3300039453 Bacteria 1733
339 Ga0436362_0347378 3300039453 Bacteria 3926
340 Ga0451577_0300989 3300042876 Unclassified 1453
341 Ga0466966_0234017 3300044684 Unclassified 1108
342 Ga0466958_0117015 3300045836 Bacteria 1667
343 Ga0495580_0342685 3300046472 Unclassified 1013
344 Ga0495582_0015169 3300046473 Bacteria 4238
345 Ga0495586_0045044 3300046535 Unclassified 2377
346 Ga0495587_0006794 3300046536 Bacteria 7447
347 Ga0495645_0325531 3300046543 Bacteria 997
348 Ga0495634_0042427 3300046642 Bacteria 3086
349 Ga0495624_0324505 3300046690 Unclassified 927
350 Ga0495674_0078868 3300047319 Bacteria 2829
351 Ga0495674_0198941 3300047319 Bacteria 1663
352 Ga0495684_0131906 3300047471 Bacteria 1876
353 Ga0495602_0005600 3300048088 Bacteria 13188
354 Ga0496112_0020920 3300048915 Bacteria 6212
355 Ga0496115_0043170 3300048918 Bacteria 3595
356 Ga0496115_0180349 3300048918 Bacteria 1746
357 Ga0501034_0086731 3300049571 Bacteria 3131
358 Ga0501037_0029751 3300049573 Bacteria 4035
359 Ga0501047_0031372 3300049581 Bacteria 5125
360 Ga0501070_0015085 3300049586 Bacteria 6504
361 Ga0495612_0033531 3300053078 Bacteria 2078
362 Ga0500616_0072771 3300053153 Bacteria 1747
363 Ga0070696_100080900
364 Ga0070683_100003062
365 Ga0070683_100025051
366 Ga0070683_100350387
367 Ga0070683_100390342
368 Ga0068869_100078802
369 Ga0068869_100188681
370 Ga0070666_10002895
371 Ga0070666_10153436
372 Ga0068868_100007515
373 Ga0068868_100061551
374 Ga0068868_100237664
375 Ga0070660_100083094
376 Ga0070691_10015710
377 Ga0070691_10239688
378 Ga0070661_100056958
379 Ga0070661_100088988
380 Ga0070667_100112289
381 Ga0070667_100211228
382 Ga0070667_100324614
383 Ga0070709_10005677
384 Ga0070709_10028213
385 Ga0070714_100063754
386 Ga0070714_100087245
387 Ga0070714_100148283
388 Ga0070713_100058093
389 Ga0070713_100105717
390 Ga0070713_100289708
391 Ga0070711_100063602
392 Ga0070711_100110640
393 Ga0070662_100027976
394 Ga0070681_10008180
395 Ga0070681_10029391
396 Ga0070681_10062572
397 Ga0070681_10247632
398 Ga0068867_100004965
399 Ga0070679_100011620
400 Ga0070679_100513179
401 Ga0070684_100002507
402 Ga0068853_100034437
403 Ga0068853_100186353
404 Ga0068853_100660132
405 Ga0070695_100125771
406 Ga0070695_100194046
407 Ga0070693_100079460
408 Ga0070665_100061415
409 Ga0070665_100162449
410 Ga0068855_100011816
411 Ga0068855_100027571
412 Ga0068855_100083411
413 Ga0068855_100259263
414 Ga0068855_100455809
415 Ga0068855_100469585
416 Ga0068857_100003901
417 Ga0068857_100005231
418 Ga0068857_100006378
419 Ga0068857_100045199
420 Ga0068857_100222244
421 Ga0068856_100001855
422 Ga0068856_100004699
423 Ga0068856_100013966
424 Ga0068856_100085504
425 Ga0068856_100137228
426 Ga0068856_100234639
427 Ga0068859_100028419
428 Ga0068859_100206905
429 Ga0068859_100346590
430 Ga0068864_100038205
431 Ga0068864_100216809
432 Ga0068863_100059442
433 Ga0068858_100005380
434 Ga0068858_100025944
435 Ga0068858_100029538
436 Ga0068860_100364460
437 Ga0068860_100480070
438 Ga0081455_10068776
439 Ga0097621_100021745
440 Ga0097621_100029406
441 Ga0097621_100139928
442 Ga0097621_100193879
443 Ga0068871_100004229
444 Ga0068871_100011929
445 Ga0068871_100068609
446 Ga0068871_100098035
447 Ga0068865_100028881
448 Ga0068865_100092673
449 Ga0097620_100028420
450 Ga0097620_100206899
451 Ga0097620_100346574
452 Ga0105240_10000438
453 Ga0105240_10001075
454 Ga0105240_10002574
455 Ga0105240_10013345
456 Ga0105240_10087048
457 Ga0105240_10107842
458 Ga0105240_10190009
459 Ga0105240_10269057
460 Ga0105245_10015845
461 Ga0105245_10020617
462 Ga0105245_10022815
463 Ga0105245_10045488
464 Ga0105245_10069879
465 Ga0105245_10267219
466 Ga0105245_10417308
467 Ga0105245_10454011
468 Ga0105243_10008129
469 Ga0105243_10058441
470 Ga0105241_10012620
471 Ga0105241_10023034
472 Ga0105241_10098692
473 Ga0105241_10302754
474 Ga0105242_10042968
475 Ga0105242_10050023
476 Ga0105242_10134608
477 Ga0105242_10199475
478 Ga0105242_10260221
479 Ga0105242_10285294
480 Ga0105242_10302881
481 Ga0105248_10012321
482 Ga0105248_10012973
483 Ga0105248_10021173
484 Ga0105248_10066991
485 Ga0105237_10002757
486 Ga0105237_10012673
487 Ga0105237_10037839
488 Ga0105237_10124844
489 Ga0105237_10147461
490 Ga0105237_10228599
491 Ga0105238_10005581
492 Ga0105238_10008202
493 Ga0105238_10018965
494 Ga0105238_10078170
495 Ga0105238_10401471
496 Ga0105249_10028171
497 Ga0105249_10224892
498 Ga0105249_10392806
499 Ga0105239_10009774
500 Ga0105239_10009858
501 Ga0105239_10086782
502 Ga0105239_10150857
503 Ga0105239_10241305
504 Ga0105239_10357356
505 Ga0105246_10021533
506 Ga0105246_10073611
507 Ga0157373_10020898
508 Ga0157370_10008547
509 Ga0157370_10012054
510 Ga0157370_10069674
511 Ga0157369_10001600
512 Ga0157369_10008743
513 Ga0157369_10016526
514 Ga0157369_10023214
515 Ga0157369_10024335
516 Ga0157369_10096449
517 Ga0157369_10153662
518 Ga0157374_10003794
519 Ga0157374_10073813
520 Ga0157374_10075725
521 Ga0157374_10129618
522 Ga0157378_10002041
523 Ga0157378_10024655
524 Ga0157378_10172039
525 Ga0163162_10012007
526 Ga0163162_10079587
527 Ga0163162_10684937
528 Ga0163162_10818743
529 Ga0157372_10017925
530 Ga0157372_10032575
531 Ga0157372_10079883
532 Ga0157375_10049695
533 Ga0163163_10009154
534 Ga0163163_10018272
535 Ga0163163_10152187
536 Ga0163163_10923773
537 Ga0157379_10110008
538 Ga0157376_10020647
539 Ga0157376_10135722
540 Ga0157376_10212770
541 Ga0157376_10252394
542 Ga0213873_10001641
543 Ga0213872_10028147
544 Ga0213874_10021379
545 Ga0213876_10029432
546 Ga0213876_10036792
547 Ga0213876_10133025
548 Ga0213875_10000057
549 Ga0213875_10015719
550 Ga0213875_10079082
551 Ga0213875_10107801
552 Ga0207642_10132019
553 Ga0207680_10048755
554 Ga0207680_10131475
555 Ga0207699_10004346
556 Ga0207654_10007211
557 Ga0207654_10010439
558 Ga0207707_10000927
559 Ga0207695_10001584
560 Ga0207695_10001643
561 Ga0207695_10008595
562 Ga0207695_10014249
563 Ga0207695_10028656
564 Ga0207695_10046042
565 Ga0207695_10078405
566 Ga0207671_10038354
567 Ga0207671_10043149
568 Ga0207671_10048181
569 Ga0207671_10049708
570 Ga0207671_10127884
571 Ga0207671_10129692
572 Ga0207663_10059897
573 Ga0207657_10004110
574 Ga0207657_10038973
575 Ga0207657_10081856
576 Ga0207657_10215937
577 Ga0207649_10033353
578 Ga0207649_10047793
579 Ga0207649_10066549
580 Ga0207652_10010925
581 Ga0207652_10152067
582 Ga0207652_10439792
583 Ga0207694_10004295
584 Ga0207694_10007177
585 Ga0207694_10012265
586 Ga0207694_10047678
587 Ga0207694_10061675
588 Ga0207694_10100612
589 Ga0207694_10147026
590 Ga0207694_10380361
591 Ga0207687_10001871
592 Ga0207687_10077847
593 Ga0207687_10138082
594 Ga0207700_10066672
595 Ga0207700_10325835
596 Ga0207700_10432559
597 Ga0207664_10116760
598 Ga0207706_10085643
599 Ga0207686_10018150
600 Ga0207686_10055074
601 Ga0207686_10070213
602 Ga0207686_10081423
603 Ga0207686_10085298
604 Ga0207704_10015369
605 Ga0207711_10000564
606 Ga0207711_10074821
607 Ga0207689_10118071
608 Ga0207689_10126356
609 Ga0207661_10022115
610 Ga0207661_10026023
611 Ga0207679_10051767
612 Ga0207667_10000305
613 Ga0207667_10014431
614 Ga0207667_10030245
615 Ga0207667_10034680
616 Ga0207667_10111169
617 Ga0207667_10122279
618 Ga0207651_10025025
619 Ga0207712_10037666
620 Ga0207658_10093358
621 Ga0207658_10220527
622 Ga0207677_10044481
623 Ga0207677_10048102
624 Ga0207703_10007830
625 Ga0207703_10154218
626 Ga0207703_10384180
627 Ga0207639_10025614
628 Ga0207639_10083390
629 Ga0207639_10320240
630 Ga0207678_10029272
631 Ga0207702_10001949
632 Ga0207702_10071618
633 Ga0207702_10083849
634 Ga0207702_10104800
635 Ga0207702_10117935
636 Ga0207702_10242687
637 Ga0207641_10133719
638 Ga0207648_10015884
639 Ga0207648_10141700
640 Ga0207648_10585056
641 Ga0207676_10066495
642 Ga0207674_10002448
643 Ga0207674_10010643
644 Ga0207698_10028190
645 Ga0207698_10047064
646 Ga0268266_10004433
647 Ga0268266_10202678
648 Ga0268264_10033709
649 Ga0268264_10406488
650 Ga0265332_10030304
651 Ga0265340_10039428
652 Ga0265316_10136755
653 Ga0265313_10030061
654 Ga0265314_10001088
655 Ga0265314_10002013
656 Ga0373926_0002222
657 Ga0373934_0003854
658 Ga0373934_0040636
659 Ga0373944_0107938
660 Ga0373923_0011000
661 Ga0373954_0001652
662 Ga0373954_0073666
663 Ga0373943_0108811
664 Ga0373955_0068547
665 Ga0373955_0171680
666 Ga0373935_0006400
667 Ga0373935_0082349
668 Ga0373927_0002292
669 Ga0373927_0047155
670 Ga0373927_0049240
671 Ga0373927_0326164
672 Ga0373933_0011588
673 Ga0373947_0004707
674 Ga0373937_0018018
675 Ga0373937_0039834
676 Ga0373937_0655023
677 Ga0373925_0047385
678 Ga0436364_0248525
679 Ga0436364_0373559
680 Ga0436364_0455018
681 Ga0436364_0885511
682 Ga0436364_0962549
683 Ga0436364_1069869
684 Ga0436364_1102754
685 Ga0436364_1121221
686 Ga0436364_1225448
687 Ga0436364_1257793
688 Ga0436364_1345352
689 Ga0436364_1518684
690 Ga0395901_0409613
691 Ga0436365_0291153
692 Ga0436365_1407879
693 Ga0436365_1426088
694 Ga0436360_0024446
695 Ga0436361_1038242
696 Ga0436363_0192962
697 Ga0436363_0197097
698 Ga0436363_0643185
699 Ga0436362_0054577
700 Ga0436362_0099289
701 Ga0436362_0347378
702 Ga0451577_0300989
703 Ga0466966_0234017
704 Ga0466958_0117015
705 Ga0495580_0342685
706 Ga0495582_0015169
707 Ga0495586_0045044
708 Ga0495587_0006794
709 Ga0495645_0325531
710 Ga0495634_0042427
711 Ga0495624_0324505
712 Ga0495674_0078868
713 Ga0495674_0198941
714 Ga0495684_0131906
715 Ga0495602_0005600
716 Ga0496112_0020920
717 Ga0496115_0043170
718 Ga0496115_0180349
719 Ga0501034_0086731
720 Ga0501037_0029751
721 Ga0501047_0031372
722 Ga0501070_0015085
723 Ga0495612_0033531
724 Ga0500616_0072771

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03466

LysR_substrate

LysR substrate binding domain

89

301

0.98

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

7

65

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5y2w-assembly1.cif.gz_A-2 structure of synechocystis pcc6803 ccmr regulatory domain in complex with 2-pg 0.8985 68 272
7erq-assembly1.cif.gz_B the regulatory domain of yeie, a sulfite sensing lysr-type transcriptional regulator from cronobacter sakazakii (ligand-free form) 0.8921 68 273
2fyi-assembly2.cif.gz_C crystal structure of the cofactor-binding domain of the cbl transcriptional regulator 0.892 67 272
5z50-assembly1.cif.gz_B crystal structure of pacysb regulatory domain 0.8916 68 271
5ted-assembly1.cif.gz_A effector binding domain of quir in complex with shikimate 0.8881 68 272
ID Description Score Start End Superfamily
af_P27111_3_88_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9274 4 60 1.10.10.10
af_Q2G1Q6_4_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9221 5 60 1.10.10.10
af_P39376_183_267_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9077 170 237 3.40.190.10
af_P52696_95_297_3.40.190.290 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2; 0.9061 70 272 3.40.190.290
af_P0ACR7_95_299_3.40.190.290 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2; 0.9025 70 272 3.40.190.290
ID Description Score Start End GO Terms
AF-A0A354RCI4-F1-model_v4 LysR family transcriptional regulator 0.9621 109 273 GO:0005829
GO:0006355
AF-A0A354RCI4-F1-model_v4 LysR family transcriptional regulator 0.9283 109 273 GO:0005829
GO:0006355
AF-A0A7Y8AXN9-F1-model_v4 deleted 0.9014 72 273
AF-A0A7C5BP07-F1-model_v4 LysR family transcriptional regulator 0.892 102 274 GO:0000976
GO:0006355
AF-A0A7V0QHQ5-F1-model_v4 LysR family transcriptional regulator 0.8919 67 273 GO:0000976
GO:0006355

Map