F422391

General Info

Members Datasets Scaffolds Average Seq Length
361 167 722 296

Family's Representative Sequence

Representative Sequence 3300050511|nmdc:mga08y16_473945_c1|nmdc:mga08y16_473945_c1_215_1201
Length 328
Sequence MACEHWSWLPESTKAAAVARRFARVSENSWWVARIPASSANLGPGFDALGLALDIPLTVRFRRSKGLDILATGRDAESIPPGENNLIWQTALAVARDVGREMPAVEMRIHNEIPIGRGLGSSASALVAGVVVADALLGLNWSREKLLDEAAKIEGHPDNVAACVLGSIVASAIDNGGTARAVRLELPEWCDVSVIVPDFILPTVEARQVLPESYSKADVIFNVQRSALLIAALCTGVPGVFPAALEDRLHQPYRSKLVPGLAEILKLRVPGLLGCALSGAGPSVLVLYERGAAQVCEAVQAVFREKGHHSEILPAPISKQGLTISKES

Samples

Sample ID Description Type Environment
1 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
106 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
107 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
110 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
111 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
112 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
113 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
130 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
131 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
132 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
133 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
134 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
135 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
152 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
153 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.28
Rhizosphere 98.61
Stem 0
Stem Tuber 0
Unclassified 7.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga08y16_473945_c1 3300050511 Bacteria 1274
2 SwRhRL2b_contig_1957525 2162886007 Eukaryota 64253
3 Ga0065704_10000186 3300005289 Eukaryota 349361
4 Ga0065707_10081779 3300005295 Eukaryota 42525
5 Ga0070658_10010090 3300005327 Bacteria 7581
6 Ga0070683_100003062 3300005329 Bacteria 13451
7 Ga0070683_100006794 3300005329 Bacteria 9615
8 Ga0070683_100291998 3300005329 Bacteria 1551
9 Ga0070666_10095670 3300005335 Bacteria 2044
10 Ga0070680_100016074 3300005336 Bacteria 5879
11 Ga0070680_100022694 3300005336 Viruses 5001
12 Ga0070680_100121531 3300005336 Bacteria 2180
13 Ga0068868_100034345 3300005338 Bacteria 3914
14 Ga0068868_100034422 3300005338 Bacteria 3911
15 Ga0070660_100062463 3300005339 Bacteria 2893
16 Ga0070660_100116349 3300005339 Bacteria 2132
17 Ga0070691_10034175 3300005341 Bacteria 2393
18 Ga0070691_10135689 3300005341 Unclassified 1250
19 Ga0070661_100215118 3300005344 Bacteria 1472
20 Ga0070671_100139460 3300005355 Bacteria 2046
21 Ga0070659_100055602 3300005366 Bacteria 3120
22 Ga0070659_100093950 3300005366 Bacteria 2407
23 Ga0070713_100217632 3300005436 Bacteria 1732
24 Ga0070711_100072549 3300005439 Unclassified 2429
25 Ga0070663_100124832 3300005455 Bacteria 1949
26 Ga0070678_100163825 3300005456 Bacteria 1804
27 Ga0070681_10005504 3300005458 Bacteria 12236
28 Ga0070681_10008180 3300005458 Bacteria 10238
29 Ga0070681_10009639 3300005458 Bacteria 9499
30 Ga0070681_10085267 3300005458 Bacteria 3111
31 Ga0070681_10106612 3300005458 Bacteria 2744
32 Ga0070681_10160347 3300005458 Unclassified 2173
33 Ga0068867_100056779 3300005459 Bacteria 2897
34 Ga0070699_100030572 3300005518 Unclassified 4650
35 Ga0070679_100011620 3300005530 Bacteria 8391
36 Ga0070679_100027433 3300005530 Bacteria 5605
37 Ga0070679_100207239 3300005530 Viruses 1925
38 Ga0070684_100002507 3300005535 Bacteria 13526
39 Ga0070684_100028878 3300005535 Bacteria 4694
40 Ga0068853_100025593 3300005539 Bacteria 4953
41 Ga0070696_100000202 3300005546 Bacteria 35448
42 Ga0070693_100042461 3300005547 Bacteria 2562
43 Ga0070665_100037740 3300005548 Bacteria 4857
44 Ga0070665_100185689 3300005548 Unclassified 2080
45 Ga0068855_100001959 3300005563 Bacteria 25565
46 Ga0068855_100005049 3300005563 Bacteria 16107
47 Ga0068855_100010512 3300005563 Bacteria 11166
48 Ga0068855_100027571 3300005563 Bacteria 6794
49 Ga0068855_100044966 3300005563 Bacteria 5224
50 Ga0068855_100047749 3300005563 Bacteria 5057
51 Ga0068855_100130116 3300005563 Bacteria 2875
52 Ga0070664_100037786 3300005564 Bacteria 4061
53 Ga0070664_100069594 3300005564 Bacteria 3012
54 Ga0068857_100005231 3300005577 Bacteria 11048
55 Ga0068857_100005882 3300005577 Bacteria 10470
56 Ga0068856_100004699 3300005614 Bacteria 13562
57 Ga0068856_100006642 3300005614 Bacteria 11333
58 Ga0068856_100055435 3300005614 Bacteria 3912
59 Ga0068856_100170538 3300005614 Bacteria 2188
60 Ga0068856_100387500 3300005614 Bacteria 1417
61 Ga0068852_100002343 3300005616 Bacteria 13036
62 Ga0068852_100178509 3300005616 Viruses 1995
63 Ga0068852_100225252 3300005616 Bacteria 1785
64 Ga0068859_100181987 3300005617 Bacteria 2185
65 Ga0068870_10099443 3300005840 Bacteria 1641
66 Ga0068863_100111358 3300005841 Bacteria 2607
67 Ga0068858_100155935 3300005842 Bacteria 2148
68 Ga0068860_100294061 3300005843 Unclassified 1590
69 Ga0081539_10157410 3300005985 Unclassified 1086
70 Ga0070712_100079392 3300006175 Unclassified 2371
71 Ga0097621_100001453 3300006237 Bacteria 16213
72 Ga0097621_100021745 3300006237 Bacteria 4969
73 Ga0097621_100066916 3300006237 Bacteria 2960
74 Ga0068871_100022713 3300006358 Bacteria 4840
75 Ga0068871_100040542 3300006358 Bacteria 3730
76 Ga0068871_100083610 3300006358 Bacteria 2648
77 Ga0075431_100102039 3300006847 Unclassified 2961
78 Ga0068865_100018685 3300006881 Bacteria 4477
79 Ga0068865_100020379 3300006881 Bacteria 4298
80 Ga0075436_100001120 3300006914 Bacteria 18123
81 Ga0097620_100181984 3300006931 Bacteria 2185
82 Ga0075435_100151940 3300007076 Bacteria 1947
83 Ga0105240_10001367 3300009093 Bacteria 41914
84 Ga0105240_10013345 3300009093 Bacteria 11291
85 Ga0105240_10063245 3300009093 Bacteria 4604
86 Ga0105240_10107842 3300009093 Unclassified 3376
87 Ga0105240_10134086 3300009093 Bacteria 2967
88 Ga0105240_10168152 3300009093 Bacteria 2599
89 Ga0105240_10327093 3300009093 Bacteria 1745
90 Ga0105240_10406142 3300009093 Bacteria 1533
91 Ga0105240_10449889 3300009093 Bacteria 1441
92 Ga0105240_10527732 3300009093 Bacteria 1309
93 Ga0111539_10009071 3300009094 Bacteria 12590
94 Ga0105245_10003818 3300009098 Bacteria 13390
95 Ga0105245_10022815 3300009098 Bacteria 5492
96 Ga0105245_10064273 3300009098 Bacteria 3316
97 Ga0105245_10073725 3300009098 Bacteria 3104
98 Ga0105245_10132153 3300009098 Bacteria 2342
99 Ga0105245_10182443 3300009098 Bacteria 2006
100 Ga0105247_10054100 3300009101 Bacteria 2477
101 Ga0105243_10058441 3300009148 Bacteria 3073
102 Ga0105241_10013481 3300009174 Bacteria 5991
103 Ga0105241_10013947 3300009174 Bacteria 5891
104 Ga0105241_10064578 3300009174 Bacteria 2826
105 Ga0105242_10017695 3300009176 Bacteria 5559
106 Ga0105242_10088206 3300009176 Bacteria 2606
107 Ga0105242_10176959 3300009176 Bacteria 1879
108 Ga0105242_10198317 3300009176 Bacteria 1781
109 Ga0105248_10003201 3300009177 Bacteria 18151
110 Ga0105248_10013736 3300009177 Bacteria 8914
111 Ga0105248_10024277 3300009177 Bacteria 6741
112 Ga0105248_10060620 3300009177 Bacteria 4248
113 Ga0105248_10104739 3300009177 Bacteria 3189
114 Ga0105248_10146052 3300009177 Bacteria 2669
115 Ga0105237_10005324 3300009545 Bacteria 14552
116 Ga0105237_10012673 3300009545 Bacteria 8874
117 Ga0105237_10037839 3300009545 Bacteria 4875
118 Ga0105237_10063239 3300009545 Bacteria 3699
119 Ga0105237_10409648 3300009545 Bacteria 1360
120 Ga0105238_10005581 3300009551 Bacteria 12428
121 Ga0105238_10006934 3300009551 Bacteria 11320
122 Ga0105238_10008202 3300009551 Bacteria 10448
123 Ga0105238_10019320 3300009551 Bacteria 6941
124 Ga0105238_10037041 3300009551 Bacteria 4960
125 Ga0105238_10051296 3300009551 Bacteria 4150
126 Ga0105238_10054495 3300009551 Bacteria 4016
127 Ga0105238_10085809 3300009551 Bacteria 3136
128 Ga0105238_10116073 3300009551 Bacteria 2656
129 Ga0105239_10005016 3300010375 Bacteria 15631
130 Ga0105239_10009611 3300010375 Bacteria 10879
131 Ga0105239_10009774 3300010375 Bacteria 10781
132 Ga0105239_10011066 3300010375 Bacteria 10072
133 Ga0105239_10069686 3300010375 Bacteria 3863
134 Ga0105239_10201202 3300010375 Bacteria 2231
135 Ga0105246_10013718 3300011119 Bacteria 5083
136 Ga0105246_10123614 3300011119 Bacteria 1922
137 Ga0157373_10041633 3300013100 Bacteria 3285
138 Ga0157370_10006847 3300013104 Bacteria 12480
139 Ga0157370_10008547 3300013104 Bacteria 11035
140 Ga0157370_10012054 3300013104 Bacteria 8999
141 Ga0157370_10031403 3300013104 Bacteria 5196
142 Ga0157370_10125713 3300013104 Bacteria 2393
143 Ga0157370_10216114 3300013104 Viruses 1776
144 Ga0157370_10219294 3300013104 Bacteria 1762
145 Ga0157369_10008743 3300013105 Bacteria 11599
146 Ga0157369_10016330 3300013105 Viruses 8355
147 Ga0157369_10023214 3300013105 Bacteria 6910
148 Ga0157369_10024335 3300013105 Bacteria 6738
149 Ga0157369_10035924 3300013105 Bacteria 5431
150 Ga0157369_10091732 3300013105 Bacteria 3242
151 Ga0157369_10613155 3300013105 Bacteria 1123
152 Ga0157374_10007654 3300013296 Bacteria 9222
153 Ga0157374_10054998 3300013296 Bacteria 3713
154 Ga0157374_10314152 3300013296 Unclassified 1552
155 Ga0157378_10002041 3300013297 Bacteria 18090
156 Ga0157378_10359007 3300013297 Unclassified 1425
157 Ga0157378_10419723 3300013297 Bacteria 1322
158 Ga0157378_10454567 3300013297 Unclassified 1272
159 Ga0157372_10032575 3300013307 Bacteria 5716
160 Ga0157372_10229916 3300013307 Viruses 2150
161 Ga0157372_10285492 3300013307 Bacteria 1919
162 Ga0157372_10290271 3300013307 Bacteria 1902
163 Ga0157375_10024587 3300013308 Bacteria 5578
164 Ga0157375_10055752 3300013308 Bacteria 3898
165 Ga0157375_10670077 3300013308 Bacteria 1192
166 Ga0163163_10000894 3300014325 Bacteria 25299
167 Ga0163163_10005939 3300014325 Bacteria 10626
168 Ga0163163_10142006 3300014325 Unclassified 2444
169 Ga0163163_10160053 3300014325 Bacteria 2297
170 Ga0157379_10387032 3300014968 Bacteria 1284
171 Ga0157376_10017655 3300014969 Bacteria 5450
172 Ga0157376_10047915 3300014969 Bacteria 3531
173 Ga0157376_10386454 3300014969 Bacteria 1350
174 Ga0207705_10134860 3300025909 Bacteria 1840
175 Ga0207654_10051088 3300025911 Bacteria 2378
176 Ga0207707_10000927 3300025912 Bacteria 28437
177 Ga0207707_10014579 3300025912 Bacteria 6847
178 Ga0207707_10142780 3300025912 Bacteria 2093
179 Ga0207707_10337938 3300025912 Bacteria 1299
180 Ga0207695_10001584 3300025913 Bacteria 37018
181 Ga0207695_10005193 3300025913 Bacteria 17429
182 Ga0207695_10010871 3300025913 Bacteria 11084
183 Ga0207695_10014249 3300025913 Bacteria 9430
184 Ga0207695_10053148 3300025913 Bacteria 4238
185 Ga0207695_10432526 3300025913 Bacteria 1200
186 Ga0207671_10020872 3300025914 Bacteria 4981
187 Ga0207671_10070377 3300025914 Bacteria 2608
188 Ga0207671_10075000 3300025914 Bacteria 2529
189 Ga0207663_10065632 3300025916 Bacteria 2321
190 Ga0207657_10321684 3300025919 Viruses 1223
191 Ga0207649_10119279 3300025920 Bacteria 1776
192 Ga0207652_10122692 3300025921 Bacteria 2312
193 Ga0207694_10004295 3300025924 Bacteria 11151
194 Ga0207694_10012265 3300025924 Bacteria 6458
195 Ga0207694_10013568 3300025924 Bacteria 6139
196 Ga0207694_10028707 3300025924 Bacteria 4242
197 Ga0207694_10037866 3300025924 Bacteria 3707
198 Ga0207694_10172409 3300025924 Bacteria 1752
199 Ga0207687_10001871 3300025927 Bacteria 14483
200 Ga0207687_10002890 3300025927 Bacteria 11664
201 Ga0207687_10006189 3300025927 Bacteria 7922
202 Ga0207687_10066277 3300025927 Bacteria 2566
203 Ga0207687_10123004 3300025927 Bacteria 1943
204 Ga0207700_10082974 3300025928 Bacteria 2508
205 Ga0207700_10198278 3300025928 Bacteria 1690
206 Ga0207664_10093199 3300025929 Bacteria 2473
207 Ga0207644_10116198 3300025931 Bacteria 2030
208 Ga0207690_10051056 3300025932 Bacteria 2764
209 Ga0207686_10002328 3300025934 Bacteria 10387
210 Ga0207686_10028711 3300025934 Bacteria 3274
211 Ga0207709_10032304 3300025935 Bacteria 3064
212 Ga0207704_10122689 3300025938 Bacteria 1782
213 Ga0207704_10173709 3300025938 Bacteria 1549
214 Ga0207711_10000564 3300025941 Bacteria 37778
215 Ga0207711_10047012 3300025941 Bacteria 3689
216 Ga0207711_10063531 3300025941 Bacteria 3187
217 Ga0207711_10251249 3300025941 Bacteria 1624
218 Ga0207689_10116147 3300025942 Bacteria 2200
219 Ga0207661_10003035 3300025944 Bacteria 11608
220 Ga0207661_10022115 3300025944 Bacteria 4782
221 Ga0207661_10050631 3300025944 Bacteria 3310
222 Ga0207661_10102448 3300025944 Bacteria 2407
223 Ga0207661_10133970 3300025944 Bacteria 2126
224 Ga0207679_10212047 3300025945 Bacteria 1625
225 Ga0207667_10000305 3300025949 Bacteria 67996
226 Ga0207667_10011940 3300025949 Bacteria 10058
227 Ga0207667_10025597 3300025949 Bacteria 6455
228 Ga0207667_10105234 3300025949 Bacteria 2911
229 Ga0207667_10217994 3300025949 Bacteria 1955
230 Ga0207667_10307925 3300025949 Bacteria 1618
231 Ga0207667_10320902 3300025949 Bacteria 1582
232 Ga0207712_10395001 3300025961 Bacteria 1161
233 Ga0207677_10024751 3300026023 Bacteria 3734
234 Ga0207677_10138600 3300026023 Bacteria 1859
235 Ga0207677_10143408 3300026023 Bacteria 1832
236 Ga0207639_10076161 3300026041 Bacteria 2641
237 Ga0207639_10532205 3300026041 Bacteria 1077
238 Ga0207702_10005639 3300026078 Bacteria 10915
239 Ga0207702_10015601 3300026078 Bacteria 6288
240 Ga0207702_10085835 3300026078 Bacteria 2743
241 Ga0207702_10162139 3300026078 Bacteria 2042
242 Ga0207641_10154172 3300026088 Bacteria 2083
243 Ga0207648_10018794 3300026089 Bacteria 6247
244 Ga0207676_10071704 3300026095 Unclassified 2782
245 Ga0207674_10002448 3300026116 Bacteria 23445
246 Ga0207674_10003622 3300026116 Bacteria 18833
247 Ga0207674_10025556 3300026116 Bacteria 6294
248 Ga0207674_10220146 3300026116 Bacteria 1846
249 Ga0207683_10191922 3300026121 Bacteria 1855
250 Ga0207698_10019075 3300026142 Bacteria 4686
251 Ga0207698_10305518 3300026142 Bacteria 1483
252 Ga0268266_10035364 3300028379 Bacteria 4249
253 Ga0268266_10170756 3300028379 Unclassified 1974
254 Ga0268266_10352674 3300028379 Bacteria 1383
255 Ga0268266_10472945 3300028379 Unclassified 1194
256 Ga0268264_10204980 3300028381 Bacteria 1807
257 Ga0265338_10313293 3300028800 Bacteria 1138
258 Ga0265325_10006300 3300031241 Bacteria 7218
259 Ga0307509_10370026 3300031507 Unclassified 1150
260 Ga0265313_10045373 3300031595 Bacteria 2140
261 Ga0265314_10002013 3300031711 Bacteria 21586
262 Ga0265314_10198828 3300031711 Bacteria 1187
263 Ga0373934_0138072 3300035086 Bacteria 996
264 Ga0373953_0022595 3300035117 Bacteria 2373
265 Ga0373953_0024467 3300035117 Bacteria 2296
266 Ga0373953_0032882 3300035117 Bacteria 2026
267 Ga0373953_0133228 3300035117 Bacteria 1060
268 Ga0373954_0001652 3300035118 Bacteria 9122
269 Ga0373954_0007705 3300035118 Bacteria 4713
270 Ga0373954_0047821 3300035118 Unclassified 2003
271 Ga0373943_0014160 3300035170 Unclassified 3607
272 Ga0373943_0097241 3300035170 Bacteria 1534
273 Ga0373955_0031398 3300035172 Bacteria 2782
274 Ga0373955_0131958 3300035172 Bacteria 1459
275 Ga0373927_0002507 3300035695 Bacteria 13396
276 Ga0373927_0015195 3300035695 Bacteria 5089
277 Ga0373927_0037592 3300035695 Bacteria 3145
278 Ga0373933_0011588 3300035724 Bacteria 4864
279 Ga0373933_0046015 3300035724 Bacteria 2589
280 Ga0373933_0149395 3300035724 Bacteria 1479
281 Ga0373933_0225062 3300035724 Bacteria 1204
282 Ga0373947_0000682 3300035725 Bacteria 20203
283 Ga0373947_0004707 3300035725 Bacteria 7995
284 Ga0373947_0144669 3300035725 Bacteria 1527
285 Ga0373937_0004941 3300036401 Bacteria 11335
286 Ga0373937_0018018 3300036401 Bacteria 6298
287 Ga0373937_0027949 3300036401 Bacteria 5102
288 Ga0373937_0028976 3300036401 Bacteria 5014
289 Ga0373937_0046061 3300036401 Bacteria 3987
290 Ga0373937_0059162 3300036401 Bacteria 3521
291 Ga0373937_0192467 3300036401 Bacteria 1917
292 Ga0373937_0215570 3300036401 Bacteria 1807
293 Ga0373925_0000383 3300037068 Bacteria 45655
294 Ga0373925_0027589 3300037068 Bacteria 4156
295 Ga0373925_0076145 3300037068 Bacteria 2544
296 Ga0395898_0103944 3300037466 Bacteria 2725
297 Ga0395898_0552399 3300037466 Bacteria 1094
298 Ga0436364_0138642 3300037853 Bacteria 9608
299 Ga0436364_1191397 3300037853 Unclassified 2337
300 Ga0436365_0338788 3300039437 Bacteria 3748
301 Ga0439448_0057288 3300042005 Bacteria 1284
302 Ga0495651_0056157 3300046462 Bacteria 3025
303 Ga0495651_0380849 3300046462 Bacteria 925
304 Ga0495580_0002781 3300046472 Bacteria 15060
305 Ga0495580_0103176 3300046472 Bacteria 1982
306 Ga0495582_0275046 3300046473 Unclassified 967
307 Ga0495664_0236686 3300046477 Bacteria 1105
308 Ga0495594_0163254 3300046499 Unclassified 1267
309 Ga0495628_0117659 3300046516 Bacteria 2041
310 Ga0495640_0001237 3300046533 Eukaryota 20005
311 Ga0495640_0212726 3300046533 Bacteria 1222
312 Ga0495587_0011596 3300046536 Bacteria 5581
313 Ga0495587_0104174 3300046536 Bacteria 1633
314 Ga0495634_0292879 3300046642 Bacteria 986
315 Ga0495635_0041715 3300046663 Bacteria 3170
316 Ga0495623_0096034 3300046679 Bacteria 1811
317 Ga0495669_0035722 3300046684 Bacteria 2195
318 Ga0495581_0182075 3300047315 Bacteria 1229
319 Ga0495674_0071804 3300047319 Bacteria 2987
320 Ga0495680_0042035 3300047322 Bacteria 3630
321 Ga0495602_0005600 3300048088 Bacteria 13188
322 Ga0496112_0066541 3300048915 Bacteria 3556
323 Ga0501031_0001243 3300049568 Bacteria 15625
324 Ga0501032_0000837 3300049569 Bacteria 25024
325 Ga0501034_0022723 3300049571 Bacteria 6388
326 Ga0501036_0004940 3300049572 Bacteria 10777
327 Ga0501037_0007636 3300049573 Bacteria 7917
328 Ga0501038_0018241 3300049574 Bacteria 6334
329 Ga0501038_0020251 3300049574 Bacteria 5984
330 Ga0501039_0005686 3300049575 Bacteria 9445
331 Ga0501043_0003588 3300049579 Bacteria 12740
332 Ga0501043_0095828 3300049579 Bacteria 2332
333 Ga0501046_0000591 3300049580 Bacteria 35671
334 Ga0501047_0010620 3300049581 Bacteria 8707
335 Ga0501047_0120705 3300049581 Unclassified 2503
336 Ga0501047_0166546 3300049581 Bacteria 2074
337 Ga0501048_0018645 3300049582 Bacteria 5102
338 Ga0501067_0005951 3300049583 Bacteria 6761
339 Ga0501068_0018077 3300049584 Bacteria 4082
340 Ga0501069_0000329 3300049585 Bacteria 21365
341 Ga0501070_0010268 3300049586 Bacteria 7919
342 Ga0501070_0081442 3300049586 Bacteria 2678
343 Ga0501072_0001356 3300049588 Bacteria 18370
344 Ga0501073_0003261 3300049589 Bacteria 12180
345 Ga0501073_0042134 3300049589 Bacteria 3223
346 Ga0501074_0125739 3300049590 Bacteria 1834
347 Ga0501076_0042397 3300049592 Bacteria 3582
348 Ga0501079_0051702 3300049741 Bacteria 3172
349 Ga0501080_0000466 3300049742 Bacteria 31417
350 Ga0501083_0042249 3300049744 Unclassified 3091
351 Ga0501035_0003747 3300049822 Bacteria 14500
352 Ga0501035_0106757 3300049822 Bacteria 2455
353 Ga0501044_0000537 3300049823 Bacteria 45993
354 Ga0501044_0010485 3300049823 Bacteria 10056
355 Ga0501044_0022553 3300049823 Bacteria 6708
356 nmdc:mga06r32_170054_c1 3300050510 Unclassified 2163
357 nmdc:mga06r32_3342_c1 3300050510 Bacteria 14361
358 nmdc:mga08y16_16239_c1 3300050511 Bacteria 7828
359 nmdc:mga08x19_3541_c1 3300050514 Bacteria 9287
360 Ga0501084_0006326 3300054114 Bacteria 9724
361 Ga0501082_0102593 3300060353 Bacteria 2474
362 nmdc:mga08y16_473945_c1
363 SwRhRL2b_contig_1957525
364 Ga0065704_10000186
365 Ga0065707_10081779
366 Ga0070658_10010090
367 Ga0070683_100003062
368 Ga0070683_100006794
369 Ga0070683_100291998
370 Ga0070666_10095670
371 Ga0070680_100016074
372 Ga0070680_100022694
373 Ga0070680_100121531
374 Ga0068868_100034345
375 Ga0068868_100034422
376 Ga0070660_100062463
377 Ga0070660_100116349
378 Ga0070691_10034175
379 Ga0070691_10135689
380 Ga0070661_100215118
381 Ga0070671_100139460
382 Ga0070659_100055602
383 Ga0070659_100093950
384 Ga0070713_100217632
385 Ga0070711_100072549
386 Ga0070663_100124832
387 Ga0070678_100163825
388 Ga0070681_10005504
389 Ga0070681_10008180
390 Ga0070681_10009639
391 Ga0070681_10085267
392 Ga0070681_10106612
393 Ga0070681_10160347
394 Ga0068867_100056779
395 Ga0070699_100030572
396 Ga0070679_100011620
397 Ga0070679_100027433
398 Ga0070679_100207239
399 Ga0070684_100002507
400 Ga0070684_100028878
401 Ga0068853_100025593
402 Ga0070696_100000202
403 Ga0070693_100042461
404 Ga0070665_100037740
405 Ga0070665_100185689
406 Ga0068855_100001959
407 Ga0068855_100005049
408 Ga0068855_100010512
409 Ga0068855_100027571
410 Ga0068855_100044966
411 Ga0068855_100047749
412 Ga0068855_100130116
413 Ga0070664_100037786
414 Ga0070664_100069594
415 Ga0068857_100005231
416 Ga0068857_100005882
417 Ga0068856_100004699
418 Ga0068856_100006642
419 Ga0068856_100055435
420 Ga0068856_100170538
421 Ga0068856_100387500
422 Ga0068852_100002343
423 Ga0068852_100178509
424 Ga0068852_100225252
425 Ga0068859_100181987
426 Ga0068870_10099443
427 Ga0068863_100111358
428 Ga0068858_100155935
429 Ga0068860_100294061
430 Ga0081539_10157410
431 Ga0070712_100079392
432 Ga0097621_100001453
433 Ga0097621_100021745
434 Ga0097621_100066916
435 Ga0068871_100022713
436 Ga0068871_100040542
437 Ga0068871_100083610
438 Ga0075431_100102039
439 Ga0068865_100018685
440 Ga0068865_100020379
441 Ga0075436_100001120
442 Ga0097620_100181984
443 Ga0075435_100151940
444 Ga0105240_10001367
445 Ga0105240_10013345
446 Ga0105240_10063245
447 Ga0105240_10107842
448 Ga0105240_10134086
449 Ga0105240_10168152
450 Ga0105240_10327093
451 Ga0105240_10406142
452 Ga0105240_10449889
453 Ga0105240_10527732
454 Ga0111539_10009071
455 Ga0105245_10003818
456 Ga0105245_10022815
457 Ga0105245_10064273
458 Ga0105245_10073725
459 Ga0105245_10132153
460 Ga0105245_10182443
461 Ga0105247_10054100
462 Ga0105243_10058441
463 Ga0105241_10013481
464 Ga0105241_10013947
465 Ga0105241_10064578
466 Ga0105242_10017695
467 Ga0105242_10088206
468 Ga0105242_10176959
469 Ga0105242_10198317
470 Ga0105248_10003201
471 Ga0105248_10013736
472 Ga0105248_10024277
473 Ga0105248_10060620
474 Ga0105248_10104739
475 Ga0105248_10146052
476 Ga0105237_10005324
477 Ga0105237_10012673
478 Ga0105237_10037839
479 Ga0105237_10063239
480 Ga0105237_10409648
481 Ga0105238_10005581
482 Ga0105238_10006934
483 Ga0105238_10008202
484 Ga0105238_10019320
485 Ga0105238_10037041
486 Ga0105238_10051296
487 Ga0105238_10054495
488 Ga0105238_10085809
489 Ga0105238_10116073
490 Ga0105239_10005016
491 Ga0105239_10009611
492 Ga0105239_10009774
493 Ga0105239_10011066
494 Ga0105239_10069686
495 Ga0105239_10201202
496 Ga0105246_10013718
497 Ga0105246_10123614
498 Ga0157373_10041633
499 Ga0157370_10006847
500 Ga0157370_10008547
501 Ga0157370_10012054
502 Ga0157370_10031403
503 Ga0157370_10125713
504 Ga0157370_10216114
505 Ga0157370_10219294
506 Ga0157369_10008743
507 Ga0157369_10016330
508 Ga0157369_10023214
509 Ga0157369_10024335
510 Ga0157369_10035924
511 Ga0157369_10091732
512 Ga0157369_10613155
513 Ga0157374_10007654
514 Ga0157374_10054998
515 Ga0157374_10314152
516 Ga0157378_10002041
517 Ga0157378_10359007
518 Ga0157378_10419723
519 Ga0157378_10454567
520 Ga0157372_10032575
521 Ga0157372_10229916
522 Ga0157372_10285492
523 Ga0157372_10290271
524 Ga0157375_10024587
525 Ga0157375_10055752
526 Ga0157375_10670077
527 Ga0163163_10000894
528 Ga0163163_10005939
529 Ga0163163_10142006
530 Ga0163163_10160053
531 Ga0157379_10387032
532 Ga0157376_10017655
533 Ga0157376_10047915
534 Ga0157376_10386454
535 Ga0207705_10134860
536 Ga0207654_10051088
537 Ga0207707_10000927
538 Ga0207707_10014579
539 Ga0207707_10142780
540 Ga0207707_10337938
541 Ga0207695_10001584
542 Ga0207695_10005193
543 Ga0207695_10010871
544 Ga0207695_10014249
545 Ga0207695_10053148
546 Ga0207695_10432526
547 Ga0207671_10020872
548 Ga0207671_10070377
549 Ga0207671_10075000
550 Ga0207663_10065632
551 Ga0207657_10321684
552 Ga0207649_10119279
553 Ga0207652_10122692
554 Ga0207694_10004295
555 Ga0207694_10012265
556 Ga0207694_10013568
557 Ga0207694_10028707
558 Ga0207694_10037866
559 Ga0207694_10172409
560 Ga0207687_10001871
561 Ga0207687_10002890
562 Ga0207687_10006189
563 Ga0207687_10066277
564 Ga0207687_10123004
565 Ga0207700_10082974
566 Ga0207700_10198278
567 Ga0207664_10093199
568 Ga0207644_10116198
569 Ga0207690_10051056
570 Ga0207686_10002328
571 Ga0207686_10028711
572 Ga0207709_10032304
573 Ga0207704_10122689
574 Ga0207704_10173709
575 Ga0207711_10000564
576 Ga0207711_10047012
577 Ga0207711_10063531
578 Ga0207711_10251249
579 Ga0207689_10116147
580 Ga0207661_10003035
581 Ga0207661_10022115
582 Ga0207661_10050631
583 Ga0207661_10102448
584 Ga0207661_10133970
585 Ga0207679_10212047
586 Ga0207667_10000305
587 Ga0207667_10011940
588 Ga0207667_10025597
589 Ga0207667_10105234
590 Ga0207667_10217994
591 Ga0207667_10307925
592 Ga0207667_10320902
593 Ga0207712_10395001
594 Ga0207677_10024751
595 Ga0207677_10138600
596 Ga0207677_10143408
597 Ga0207639_10076161
598 Ga0207639_10532205
599 Ga0207702_10005639
600 Ga0207702_10015601
601 Ga0207702_10085835
602 Ga0207702_10162139
603 Ga0207641_10154172
604 Ga0207648_10018794
605 Ga0207676_10071704
606 Ga0207674_10002448
607 Ga0207674_10003622
608 Ga0207674_10025556
609 Ga0207674_10220146
610 Ga0207683_10191922
611 Ga0207698_10019075
612 Ga0207698_10305518
613 Ga0268266_10035364
614 Ga0268266_10170756
615 Ga0268266_10352674
616 Ga0268266_10472945
617 Ga0268264_10204980
618 Ga0265338_10313293
619 Ga0265325_10006300
620 Ga0307509_10370026
621 Ga0265313_10045373
622 Ga0265314_10002013
623 Ga0265314_10198828
624 Ga0373934_0138072
625 Ga0373953_0022595
626 Ga0373953_0024467
627 Ga0373953_0032882
628 Ga0373953_0133228
629 Ga0373954_0001652
630 Ga0373954_0007705
631 Ga0373954_0047821
632 Ga0373943_0014160
633 Ga0373943_0097241
634 Ga0373955_0031398
635 Ga0373955_0131958
636 Ga0373927_0002507
637 Ga0373927_0015195
638 Ga0373927_0037592
639 Ga0373933_0011588
640 Ga0373933_0046015
641 Ga0373933_0149395
642 Ga0373933_0225062
643 Ga0373947_0000682
644 Ga0373947_0004707
645 Ga0373947_0144669
646 Ga0373937_0004941
647 Ga0373937_0018018
648 Ga0373937_0027949
649 Ga0373937_0028976
650 Ga0373937_0046061
651 Ga0373937_0059162
652 Ga0373937_0192467
653 Ga0373937_0215570
654 Ga0373925_0000383
655 Ga0373925_0027589
656 Ga0373925_0076145
657 Ga0395898_0103944
658 Ga0395898_0552399
659 Ga0436364_0138642
660 Ga0436364_1191397
661 Ga0436365_0338788
662 Ga0439448_0057288
663 Ga0495651_0056157
664 Ga0495651_0380849
665 Ga0495580_0002781
666 Ga0495580_0103176
667 Ga0495582_0275046
668 Ga0495664_0236686
669 Ga0495594_0163254
670 Ga0495628_0117659
671 Ga0495640_0001237
672 Ga0495640_0212726
673 Ga0495587_0011596
674 Ga0495587_0104174
675 Ga0495634_0292879
676 Ga0495635_0041715
677 Ga0495623_0096034
678 Ga0495669_0035722
679 Ga0495581_0182075
680 Ga0495674_0071804
681 Ga0495680_0042035
682 Ga0495602_0005600
683 Ga0496112_0066541
684 Ga0501031_0001243
685 Ga0501032_0000837
686 Ga0501034_0022723
687 Ga0501036_0004940
688 Ga0501037_0007636
689 Ga0501038_0018241
690 Ga0501038_0020251
691 Ga0501039_0005686
692 Ga0501043_0003588
693 Ga0501043_0095828
694 Ga0501046_0000591
695 Ga0501047_0010620
696 Ga0501047_0120705
697 Ga0501047_0166546
698 Ga0501048_0018645
699 Ga0501067_0005951
700 Ga0501068_0018077
701 Ga0501069_0000329
702 Ga0501070_0010268
703 Ga0501070_0081442
704 Ga0501072_0001356
705 Ga0501073_0003261
706 Ga0501073_0042134
707 Ga0501074_0125739
708 Ga0501076_0042397
709 Ga0501079_0051702
710 Ga0501080_0000466
711 Ga0501083_0042249
712 Ga0501035_0003747
713 Ga0501035_0106757
714 Ga0501044_0000537
715 Ga0501044_0010485
716 Ga0501044_0022553
717 nmdc:mga06r32_170054_c1
718 nmdc:mga06r32_3342_c1
719 nmdc:mga08y16_16239_c1
720 nmdc:mga08x19_3541_c1
721 Ga0501084_0006326
722 Ga0501082_0102593

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00288

GHMP_kinases_N

GHMP kinases N terminal domain

85

167

0.97

PF08544

GHMP_kinases_C

GHMP kinases C terminal

229

305

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6cyz-assembly1.cif.gz_B mycobacterial homoserine kinase thrb in complex with amppnp 0.8762 4 350
3hul-assembly1.cif.gz_B-2 structure of putative homoserine kinase thrb from listeria monocytogenes 0.8637 5 351
3hul-assembly1.cif.gz_B-2 structure of putative homoserine kinase thrb from listeria monocytogenes 0.8547 5 351
6cyz-assembly1.cif.gz_B mycobacterial homoserine kinase thrb in complex with amppnp 0.8513 4 350
5wat-assembly1.cif.gz_B corynebacterium glutamicum full length homoserine kinase 0.8486 1 350
ID Description Score Start End Superfamily
af_Q92209_209_343_3.30.70.890 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;GHMP kinase, C-terminal domain 0.9942 205 338 3.30.70.890
af_Q92209_209_343_3.30.70.890 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;GHMP kinase, C-terminal domain 0.9796 205 338 3.30.70.890
af_Q92209_4_174_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9518 3 174 3.30.230.10
af_Q92209_4_174_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9408 3 174 3.30.230.10
af_Q2FYV2_4_165_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9287 6 161 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A4Y9ZVW4-F1-model_v4 GHMP kinase C-terminal domain-containing protein 0.9693 193 351
AF-A0A1S6KZF0-F1-model_v4 Putative homoserine kinase 0.9653 193 341 GO:0016301
AF-A0A2V9IWN4-F1-model_v4 Homoserine kinase (HK) (HSK) (EC 2.7.1.39) 0.9634 1 350 GO:0004413
GO:0005524
GO:0005737
GO:0009088
AF-A0A7W0ZJE1-F1-model_v4 Homoserine kinase (EC 2.7.1.39) 0.9628 107 346 GO:0004413
GO:0005524
GO:0009088
AF-A0A7W1JFS6-F1-model_v4 Homoserine kinase (EC 2.7.1.39) 0.9615 69 348 GO:0004413
GO:0005524
GO:0009088

Map