F422145

General Info

Members Datasets Scaffolds Average Seq Length
361 199 717 769

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100030834|Ga0068853_1000308342
Length 812
Sequence MSASSNKFVRIFWKVFFYTLGAFVLFLILINLGVFGSLPSLKELENPSITLATEVFAEDGTPMGKFYKDKGNRSNVEFKDISPNVINALVATEDERFYDHSGIDGFSVMRAVIKLGRDGGGSTITQQLAKNLLDQGSKNFARRGIEKLKEWIIAIKLERNFTKQEILALYLNEVPFGDNVYGIRNASRTFFQKEPDRLNVDEAAVLIGMLKGNTIYNPRRNPKMAIERRNTVMSQMVKNNYLSTPDYAKLKVRPIDLSSYKKVDENNGLAPYFRDVLRSYLQTWCKEHKNPATGEPYNLYQDGLKIYTTINPRMQLYADEAVAKQLPILQRALVSQYSIRKGTIWKDHMNVLEGAMRNSDRWHSLEDDGLTDAEIRKTFYHPVAMKVFAWNTKREKDTVMTPMDSIKYSQAMLQTAFMVMDPVTGAVKAWVGGIDFKTYKYDHVNINTKRQVGSAIKPFLYSLGIEDYNMTPETMCTTSQQYFPGFGNVPARMDKYEGGAMTMANGLAWSVNGVAAYIMKQVGPKRFADYVKQIGIPTKIDPYPSMALGACDLSLFEVMWGYTMFPSGGFSTMPYYISRIEDKNGNVLDRFDTKRKEVISQATAYTMARMMQGPVDFGTAAGLRNRLGVAEMGGKTGTTNDNSDAWFMGYIPQLMGGAWIGCDDRFIHLEGGLGYGAQAARPIWEYFFAKVLADKTLGIERNAKFIQPENMRREMMYDYMNLIEKTPPPGAEGANQGNGRANQYLDTTAPTVPVDSKLSPEEQKILKEATHQKESKEGAVKITVTDTKPQEPPRKKEGFFKRLFGGKKNKDQ

Samples

Sample ID Description Type Environment
1 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
7 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
8 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
14 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
24 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
25 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
28 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
29 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
65 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
79 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
80 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
81 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
82 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
83 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
84 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
85 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
86 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
87 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
89 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
90 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
122 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
123 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
124 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
125 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
126 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
127 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
128 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
129 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
130 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
131 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
132 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
133 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
134 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
135 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
138 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
139 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
144 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
145 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
146 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
147 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
148 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
149 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
150 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
162 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
163 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
164 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
165 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
166 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
167 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
168 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
169 2738541278 Niastella sp. CF465 Isolate Unclassified
170 2738541284 Pedobacter sp. YR016 Isolate Unclassified
171 2738541302 Pedobacter sp. CF074 Isolate Unclassified
172 2738543023 Pedobacter sp. OK628 Isolate Unclassified
173 2739367651 Pedobacter sp. OK291 Isolate Unclassified
174 2739367656 Pedobacter sp. CF523 Isolate Unclassified
175 2739367663 Pedobacter sp. YR510 Isolate Unclassified
176 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
177 2818991437 Pedobacter terrae 518 Isolate Unclassified
178 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
179 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
180 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
181 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
182 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
183 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
184 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
185 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
186 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
187 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
188 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
189 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
190 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
191 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
192 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
193 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
194 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
195 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
196 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
197 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
198 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
199 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.14
Metatranscriptomes 0
Isolates 8.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.2
Nodule 0
Rhizoplane 0
Rhizosphere 80.33
Stem 0
Stem Tuber 0
Unclassified 2.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068853_100030834 3300005539 Bacteria 4530
2 SwRhRL2b_contig_1525126 2162886007 Bacteria 13327
3 JGI24740J21852_10000912 3300001979 Bacteria 13106
4 JGI24751J29686_10000983 3300002459 Bacteria 6265
5 JGI25154J39366_1000293 3300002738 Bacteria 29883
6 JGI25152J39213_1000007 3300002773 Bacteria 156012
7 JGI25150J39212_1000013 3300002774 Bacteria 182307
8 JGI25151J46595_10000004 3300003187 Bacteria 494006
9 JGI25153J46596_10000004 3300003215 Bacteria 494006
10 rootH2_10000327 3300003320 Bacteria 51947
11 rootH2_10001798 3300003320 Bacteria 6787
12 rootH2_10003679 3300003320 Bacteria 27278
13 rootH2_10020682 3300003320 Bacteria 8342
14 rootH2_10029854 3300003320 Bacteria 27610
15 rootL2_10105893 3300003322 Bacteria 5515
16 rootH1_10055447 3300003316 Bacteria 1123
17 rootH1_10055447 3300003323 Bacteria 11096
18 rootH1_10107652 3300003323 Bacteria 11068
19 JGI25160J50197_1008170 3300003354 Bacteria 4013
20 JGI25160J50197_1009522 3300003354 Bacteria 3594
21 Ga0055536_1000010 3300003781 Bacteria 304614
22 Ga0055530_10004015 3300003791 Bacteria 7912
23 Ga0065714_10002733 3300005288 Bacteria 12948
24 Ga0065714_10003358 3300005288 Bacteria 12661
25 Ga0065714_10013230 3300005288 Bacteria 3169
26 Ga0065714_10065453 3300005288 Bacteria 9995
27 Ga0065704_10070203 3300005289 Bacteria 85863
28 Ga0065704_10078188 3300005289 Bacteria 4505
29 Ga0065704_10079785 3300005289 Bacteria 4082
30 Ga0065712_10072637 3300005290 Bacteria 4671
31 Ga0070658_10001461 3300005327 Bacteria 20135
32 Ga0070676_10000153 3300005328 Bacteria 27368
33 Ga0070670_100008495 3300005331 Bacteria 8759
34 Ga0068869_100005195 3300005334 Bacteria 8174
35 Ga0070666_10000074 3300005335 Bacteria 72739
36 Ga0070666_10000209 3300005335 Bacteria 40151
37 Ga0070680_100000076 3300005336 Bacteria 53273
38 Ga0070682_100000173 3300005337 Bacteria 47981
39 Ga0070682_100005061 3300005337 Bacteria 7325
40 Ga0068868_100004181 3300005338 Bacteria 10091
41 Ga0068868_100004761 3300005338 Bacteria 9530
42 Ga0068868_100054568 3300005338 Unclassified 3150
43 Ga0070687_100002957 3300005343 Bacteria 6521
44 Ga0070668_100014060 3300005347 Bacteria 5983
45 Ga0070675_100008396 3300005354 Bacteria 8014
46 Ga0070667_100008197 3300005367 Bacteria 8661
47 Ga0070667_100022628 3300005367 Bacteria 5212
48 Ga0070662_100003938 3300005457 Bacteria 9309
49 Ga0068867_100001726 3300005459 Bacteria 15219
50 Ga0068867_100008986 3300005459 Bacteria 7049
51 Ga0070679_100001661 3300005530 Bacteria 20056
52 Ga0070684_100000495 3300005535 Bacteria 27122
53 Ga0068853_100011603 3300005539 Bacteria 7162
54 Ga0070672_100000738 3300005543 Bacteria 19396
55 Ga0070693_100005830 3300005547 Bacteria 5951
56 Ga0070665_100000001 3300005548 Bacteria 1083363
57 Ga0070665_100000041 3300005548 Bacteria 297849
58 Ga0068855_100000089 3300005563 Bacteria 110845
59 Ga0068855_100001157 3300005563 Bacteria 32696
60 Ga0068855_100004081 3300005563 Bacteria 17813
61 Ga0068855_100016774 3300005563 Bacteria 8807
62 Ga0068855_100088399 3300005563 Bacteria 3579
63 Ga0068857_100000416 3300005577 Bacteria 30150
64 Ga0068857_100008582 3300005577 Bacteria 8840
65 Ga0068854_100022140 3300005578 Bacteria 4324
66 Ga0068856_100033066 3300005614 Bacteria 5064
67 Ga0070702_100016135 3300005615 Bacteria 3827
68 Ga0068852_100071706 3300005616 Bacteria 3043
69 Ga0068859_100000064 3300005617 Bacteria 104971
70 Ga0068859_100001471 3300005617 Bacteria 24005
71 Ga0068851_10003846 3300005834 Bacteria 6720
72 Ga0068863_100000858 3300005841 Bacteria 30354
73 Ga0068858_100007741 3300005842 Bacteria 10367
74 Ga0068860_100000111 3300005843 Bacteria 131004
75 Ga0068860_100000208 3300005843 Bacteria 92818
76 Ga0068860_100007897 3300005843 Bacteria 10623
77 Ga0068860_100009196 3300005843 Bacteria 9821
78 Ga0068860_100079244 3300005843 Unclassified 3123
79 Ga0097621_100008646 3300006237 Bacteria 7347
80 Ga0068871_100009309 3300006358 Bacteria 7110
81 Ga0068871_100042935 3300006358 Unclassified 3632
82 Ga0068865_100009268 3300006881 Bacteria 6096
83 Ga0097620_100000064 3300006931 Bacteria 104971
84 Ga0097620_100001471 3300006931 Bacteria 24005
85 Ga0105240_10000074 3300009093 Bacteria 199611
86 Ga0105240_10000147 3300009093 Bacteria 142340
87 Ga0105240_10000168 3300009093 Bacteria 133212
88 Ga0105240_10000224 3300009093 Bacteria 113175
89 Ga0105240_10002252 3300009093 Bacteria 31329
90 Ga0105240_10002663 3300009093 Bacteria 28411
91 Ga0105240_10004368 3300009093 Bacteria 21581
92 Ga0105240_10024459 3300009093 Bacteria 7958
93 Ga0105240_10029873 3300009093 Bacteria 7093
94 Ga0105240_10032320 3300009093 Bacteria 6777
95 Ga0111539_10051901 3300009094 Unclassified 4883
96 Ga0105245_10056272 3300009098 Bacteria 3535
97 Ga0105245_10073256 3300009098 Bacteria 3114
98 Ga0105247_10004954 3300009101 Bacteria 8465
99 Ga0114129_10001869 3300009147 Bacteria 28696
100 Ga0105241_10000224 3300009174 Bacteria 42685
101 Ga0105241_10000286 3300009174 Bacteria 37584
102 Ga0105241_10001283 3300009174 Bacteria 19188
103 Ga0105241_10005064 3300009174 Bacteria 9718
104 Ga0105242_10021375 3300009176 Bacteria 5079
105 Ga0105237_10000052 3300009545 Bacteria 160459
106 Ga0105237_10001529 3300009545 Bacteria 30313
107 Ga0105237_10001565 3300009545 Bacteria 29826
108 Ga0105237_10002860 3300009545 Bacteria 20998
109 Ga0105237_10006124 3300009545 Bacteria 13447
110 Ga0105237_10019356 3300009545 Bacteria 7030
111 Ga0105237_10035475 3300009545 Bacteria 5047
112 Ga0105237_10042489 3300009545 Bacteria 4583
113 Ga0105238_10004027 3300009551 Bacteria 14580
114 Ga0105238_10008004 3300009551 Bacteria 10574
115 Ga0105238_10029869 3300009551 Bacteria 5550
116 Ga0105249_10008293 3300009553 Bacteria 9046
117 Ga0105249_10008850 3300009553 Bacteria 8791
118 Ga0105239_10000048 3300010375 Bacteria 177855
119 Ga0105239_10000370 3300010375 Bacteria 66106
120 Ga0105239_10000785 3300010375 Bacteria 45044
121 Ga0105239_10000981 3300010375 Bacteria 40055
122 Ga0105239_10001154 3300010375 Bacteria 36333
123 Ga0105239_10001973 3300010375 Bacteria 26693
124 Ga0105239_10028742 3300010375 Bacteria 6113
125 Ga0105239_10029990 3300010375 Bacteria 5983
126 Ga0105239_10030798 3300010375 Bacteria 5901
127 Ga0105239_10095251 3300010375 Bacteria 3289
128 Ga0157373_10000074 3300013100 Bacteria 86431
129 Ga0157373_10001608 3300013100 Bacteria 17242
130 Ga0157373_10018799 3300013100 Bacteria 5028
131 Ga0157371_10000046 3300013102 Bacteria 187304
132 Ga0157371_10003822 3300013102 Bacteria 13447
133 Ga0157371_10003853 3300013102 Bacteria 13385
134 Ga0157371_10004981 3300013102 Bacteria 11401
135 Ga0157370_10001393 3300013104 Bacteria 29968
136 Ga0157370_10013384 3300013104 Bacteria 8452
137 Ga0157370_10016405 3300013104 Bacteria 7498
138 Ga0157370_10027772 3300013104 Bacteria 5578
139 Ga0157370_10041160 3300013104 Bacteria 4460
140 Ga0157370_10049307 3300013104 Bacteria 4030
141 Ga0157369_10000046 3300013105 Bacteria 172851
142 Ga0157374_10000001 3300013296 Bacteria 1077351
143 Ga0157374_10000002 3300013296 Bacteria 1054226
144 Ga0157374_10007111 3300013296 Bacteria 9531
145 Ga0157378_10010269 3300013297 Bacteria 8175
146 Ga0157378_10012218 3300013297 Bacteria 7520
147 Ga0157378_10019168 3300013297 Bacteria 6012
148 Ga0163162_10000037 3300013306 Bacteria 138420
149 Ga0163162_10000100 3300013306 Bacteria 78269
150 Ga0163162_10000101 3300013306 Bacteria 77114
151 Ga0163162_10000190 3300013306 Bacteria 56892
152 Ga0163162_10001171 3300013306 Bacteria 24456
153 Ga0157372_10002055 3300013307 Bacteria 21888
154 Ga0157372_10011468 3300013307 Bacteria 9425
155 Ga0157372_10018556 3300013307 Bacteria 7483
156 Ga0157372_10028893 3300013307 Bacteria 6051
157 Ga0157372_10043490 3300013307 Bacteria 4973
158 Ga0157375_10016252 3300013308 Bacteria 6677
159 Ga0163163_10000254 3300014325 Bacteria 54049
160 Ga0163163_10013741 3300014325 Bacteria 7420
161 Ga0157380_10000003 3300014326 Bacteria 224643
162 Ga0157380_10009623 3300014326 Bacteria 6931
163 Ga0182008_10000002 3300014497 Bacteria 480216
164 Ga0157379_10000367 3300014968 Bacteria 36246
165 Ga0157376_10000135 3300014969 Bacteria 50667
166 Ga0157376_10000526 3300014969 Bacteria 24613
167 Ga0157376_10001835 3300014969 Bacteria 14153
168 Ga0157376_10004235 3300014969 Bacteria 9957
169 Ga0157376_10013394 3300014969 Bacteria 6118
170 Ga0182006_1000132 3300015261 Bacteria 80500
171 Ga0182006_1000229 3300015261 Bacteria 53391
172 Ga0182006_1002723 3300015261 Bacteria 9476
173 Ga0182006_1016315 3300015261 Bacteria 3169
174 Ga0182007_10000009 3300015262 Bacteria 316298
175 Ga0182007_10002605 3300015262 Bacteria 8885
176 Ga0182005_1000023 3300015265 Bacteria 246328
177 Ga0183373_1009 3300015682 Bacteria 210158
178 Ga0163161_10000973 3300017792 Bacteria 21897
179 Ga0163161_10001103 3300017792 Bacteria 20376
180 Ga0207425_1000008 3300025245 Bacteria 618024
181 Ga0209646_1000025 3300025246 Bacteria 406493
182 Ga0209646_1002047 3300025246 Bacteria 4782
183 Ga0209026_1000097 3300025250 Bacteria 163212
184 Ga0209129_1000042 3300025258 Bacteria 305537
185 Ga0209676_1000009 3300025292 Bacteria 981719
186 Ga0209025_1000020 3300025294 Bacteria 618024
187 Ga0209758_1000022 3300025297 Bacteria 618024
188 Ga0209758_1011896 3300025297 Bacteria 4958
189 Ga0209050_1000103 3300025298 Bacteria 229225
190 Ga0207426_1000164 3300025302 Bacteria 171465
191 Ga0207426_1000220 3300025302 Bacteria 134979
192 Ga0207680_10000034 3300025903 Bacteria 74519
193 Ga0207680_10004030 3300025903 Bacteria 6941
194 Ga0207647_10012780 3300025904 Bacteria 5834
195 Ga0207647_10026742 3300025904 Bacteria 3771
196 Ga0207645_10003311 3300025907 Bacteria 12295
197 Ga0207705_10013472 3300025909 Bacteria 5900
198 Ga0207654_10000259 3300025911 Bacteria 32195
199 Ga0207654_10001139 3300025911 Bacteria 14349
200 Ga0207654_10001938 3300025911 Bacteria 10731
201 Ga0207707_10000574 3300025912 Bacteria 37317
202 Ga0207707_10082232 3300025912 Bacteria 2811
203 Ga0207695_10000023 3300025913 Bacteria 657903
204 Ga0207695_10000031 3300025913 Bacteria 526801
205 Ga0207695_10000071 3300025913 Bacteria 315568
206 Ga0207695_10000084 3300025913 Bacteria 282392
207 Ga0207695_10000110 3300025913 Bacteria 250079
208 Ga0207695_10000323 3300025913 Bacteria 114265
209 Ga0207695_10000812 3300025913 Bacteria 58133
210 Ga0207695_10007886 3300025913 Bacteria 13438
211 Ga0207695_10011843 3300025913 Bacteria 10520
212 Ga0207695_10043162 3300025913 Bacteria 4808
213 Ga0207671_10001497 3300025914 Bacteria 26937
214 Ga0207671_10003626 3300025914 Bacteria 15252
215 Ga0207671_10005086 3300025914 Bacteria 12275
216 Ga0207671_10006883 3300025914 Bacteria 10032
217 Ga0207671_10008560 3300025914 Bacteria 8657
218 Ga0207671_10011632 3300025914 Bacteria 7142
219 Ga0207671_10011826 3300025914 Bacteria 7063
220 Ga0207671_10021755 3300025914 Bacteria 4861
221 Ga0207660_10002766 3300025917 Bacteria 11500
222 Ga0207662_10010949 3300025918 Bacteria 5016
223 Ga0207652_10001002 3300025921 Bacteria 26045
224 Ga0207694_10051075 3300025924 Bacteria 3204
225 Ga0207650_10008227 3300025925 Bacteria 7118
226 Ga0207706_10014550 3300025933 Bacteria 7131
227 Ga0207691_10002120 3300025940 Bacteria 19396
228 Ga0207691_10074499 3300025940 Bacteria 3062
229 Ga0207689_10000835 3300025942 Bacteria 29733
230 Ga0207689_10049282 3300025942 Unclassified 3474
231 Ga0207667_10000135 3300025949 Bacteria 111565
232 Ga0207667_10000144 3300025949 Bacteria 108295
233 Ga0207667_10000177 3300025949 Bacteria 92852
234 Ga0207667_10003934 3300025949 Bacteria 18278
235 Ga0207667_10014193 3300025949 Bacteria 9090
236 Ga0207668_10001106 3300025972 Bacteria 16044
237 Ga0207658_10014873 3300025986 Bacteria 5332
238 Ga0207658_10015884 3300025986 Bacteria 5170
239 Ga0207677_10002069 3300026023 Bacteria 10566
240 Ga0207677_10019927 3300026023 Bacteria 4061
241 Ga0207639_10021266 3300026041 Bacteria 4658
242 Ga0207702_10029094 3300026078 Bacteria 4596
243 Ga0207641_10000082 3300026088 Bacteria 138385
244 Ga0207641_10013439 3300026088 Bacteria 6714
245 Ga0207648_10006588 3300026089 Bacteria 11528
246 Ga0207648_10053881 3300026089 Unclassified 3515
247 Ga0207674_10004100 3300026116 Bacteria 17648
248 Ga0207674_10025815 3300026116 Bacteria 6255
249 Ga0207683_10018194 3300026121 Bacteria 5993
250 Ga0207698_10031965 3300026142 Bacteria 3807
251 Ga0207698_10034332 3300026142 Bacteria 3696
252 Ga0268266_10000014 3300028379 Bacteria 644033
253 Ga0268266_10000049 3300028379 Bacteria 307763
254 Ga0268264_10000041 3300028381 Bacteria 372501
255 Ga0268264_10006410 3300028381 Bacteria 9912
256 Ga0268264_10012050 3300028381 Bacteria 7118
257 Ga0268264_10059208 3300028381 Unclassified 3209
258 Ga0307517_10002048 3300028786 Bacteria 32795
259 Ga0307515_10000002 3300028794 Bacteria 1231751
260 Ga0307515_10000412 3300028794 Bacteria 103361
261 Ga0307511_10000042 3300030521 Bacteria 102114
262 Ga0307511_10001595 3300030521 Bacteria 24052
263 Ga0265327_10000531 3300031251 Bacteria 65562
264 Ga0307509_10028767 3300031507 Bacteria 6175
265 Ga0307508_10000559 3300031616 Bacteria 44219
266 Ga0307516_10001770 3300031730 Bacteria 29691
267 Ga0307516_10059710 3300031730 Bacteria 3708
268 Ga0307405_10000016 3300031731 Bacteria 197180
269 Ga0307407_10000006 3300031903 Bacteria 218714
270 Ga0307412_10000038 3300031911 Bacteria 187857
271 Ga0307416_100000032 3300032002 Bacteria 156777
272 Ga0307414_10000378 3300032004 Bacteria 24278
273 Ga0307414_10001361 3300032004 Bacteria 12637
274 Ga0307414_10001512 3300032004 Bacteria 12082
275 Ga0307414_10011444 3300032004 Bacteria 5203
276 Ga0307510_10000091 3300033180 Bacteria 68694
277 Ga0307510_10029406 3300033180 Bacteria 6255
278 Ga0439431_0004819 3300041997 Bacteria 2972
279 Ga0439457_000387 3300042014 Bacteria 12448
280 Ga0451577_0000870 3300042876 Bacteria 44894
281 Ga0451577_0075318 3300042876 Bacteria 3010
282 Ga0466969_0000238 3300044656 Bacteria 30098
283 Ga0466972_0000207 3300044658 Bacteria 42277
284 Ga0466972_0001912 3300044658 Bacteria 10219
285 Ga0466966_0000136 3300044684 Bacteria 47038
286 Ga0453684_0072679 3300044712 Bacteria 4341
287 Ga0453684_0209027 3300044712 Unclassified 2270
288 Ga0466959_0000002 3300045049 Bacteria 362671
289 Ga0451576_0014471 3300045051 Bacteria 8778
290 Ga0495638_0036254 3300046460 Unclassified 3143
291 Ga0495606_0002804 3300046507 Bacteria 19399
292 Ga0495606_0008121 3300046507 Bacteria 9196
293 Ga0495610_0000231 3300046512 Bacteria 59540
294 Ga0495610_0002800 3300046512 Bacteria 14261
295 Ga0495648_0002333 3300046524 Bacteria 17656
296 Ga0495648_0004547 3300046524 Bacteria 11817
297 Ga0495633_0039993 3300046558 Bacteria 2236
298 Ga0495668_0000310 3300046616 Bacteria 67405
299 Ga0495668_0000720 3300046616 Bacteria 39763
300 Ga0495668_0000751 3300046616 Bacteria 38311
301 Ga0495611_0000100 3300046648 Bacteria 59688
302 Ga0495611_0000844 3300046648 Bacteria 16812
303 Ga0495674_0024846 3300047319 Bacteria 5500
304 Ga0495687_000001 3300047443 Bacteria 1215582
305 Ga0495686_0000004 3300047472 Bacteria 869019
306 Ga0495686_0000271 3300047472 Bacteria 92137
307 Ga0496121_0000010 3300048924 Bacteria 793488
308 Ga0501034_0000277 3300049571 Bacteria 92445
309 Ga0501034_0011261 3300049571 Bacteria 9284
310 Ga0501037_0006260 3300049573 Bacteria 8701
311 Ga0501047_0014119 3300049581 Bacteria 7589
312 Ga0501047_0020877 3300049581 Bacteria 6291
313 Ga0501047_0089348 3300049581 Bacteria 2958
314 Ga0501035_0035195 3300049822 Bacteria 4546
315 Ga0501044_0128965 3300049823 Bacteria 2524
316 Ga0501284_00011 3300050005 Bacteria 131008
317 nmdc:mga05p37_1503_c1 3300050507 Bacteria 27101
318 Ga0500578_0000034 3300053086 Bacteria 136582
319 Ga0500646_0000342 3300053090 Bacteria 14036
320 Ga0500646_0007216 3300053090 Bacteria 2836
321 Ga0500583_0000059 3300053092 Bacteria 68222
322 Ga0500583_0000346 3300053092 Bacteria 15437
323 Ga0500583_0000533 3300053092 Bacteria 11541
324 Ga0500651_0000229 3300053093 Bacteria 34863
325 Ga0500642_0002628 3300053130 Bacteria 5307
326 Ga0500622_0001749 3300053156 Bacteria 16736
327 Ga0501082_0043530 3300060353 Bacteria 3871
328 2586210588 2585427687 Bacteria 5544917
329 2738727072 2738541278 Bacteria 9755573
330 2738761914 2738541284 Bacteria 5199923
331 2738854773 2738541302 Bacteria 5944758
332 2739303905 2738543023 Bacteria 6767879
333 2739587703 2739367651 Bacteria 6359826
334 2739617583 2739367656 Bacteria 5152243
335 2739648043 2739367663 Bacteria 5040914
336 2776615442 2775506987 Bacteria 5373360
337 2819545606 2818991437 Bacteria 5805520
338 2819572422 2818991442 Bacteria 8318214
339 2819680596 2818991460 Bacteria 7595395
340 2840677779 2840677318 Bacteria 2664183
341 2842724508 2842722452 Bacteria 6263924
342 2842911998 2842909656 Bacteria 6185908
343 2849283636 2849281842 Bacteria 6065644
344 2852630810 2852627209 Bacteria 5896285
345 2857630030 2857627736 Bacteria 5625397
346 2883071091 2883068021 Bacteria 6192739
347 2884797978 2884791551 Bacteria 8511252
348 2896085597 2896085136 Bacteria 6129793
349 2896113802 2896109856 Bacteria 7140722
350 2902050930 2902048731 Bacteria 4976191
351 2904448104 2904445276 Bacteria 5310396
352 2904472331 2904467357 Bacteria 8057758
353 2929182888 2929177148 Bacteria 7883697
354 2929927300 2929921140 Bacteria 8649150
355 2945978843 2945977869 Bacteria 7777518
356 2945998642 2945997725 Bacteria 6404843
357 2946015291 2946013367 Bacteria 7766675
358 2954021094 2954016120 Bacteria 6446024
359 8003151185 8003151029 Bacteria 8187759
360 Ga0068853_100030834
361 SwRhRL2b_contig_1525126
362 JGI24740J21852_10000912
363 JGI24751J29686_10000983
364 JGI25154J39366_1000293
365 JGI25152J39213_1000007
366 JGI25150J39212_1000013
367 JGI25151J46595_10000004
368 JGI25153J46596_10000004
369 rootH2_10000327
370 rootH2_10001798
371 rootH2_10003679
372 rootH2_10020682
373 rootH2_10029854
374 rootL2_10105893
375 rootH1_10055447
376 rootH1_10107652
377 JGI25160J50197_1008170
378 JGI25160J50197_1009522
379 Ga0055536_1000010
380 Ga0055530_10004015
381 Ga0065714_10002733
382 Ga0065714_10003358
383 Ga0065714_10013230
384 Ga0065714_10065453
385 Ga0065704_10070203
386 Ga0065704_10078188
387 Ga0065704_10079785
388 Ga0065712_10072637
389 Ga0070658_10001461
390 Ga0070676_10000153
391 Ga0070670_100008495
392 Ga0068869_100005195
393 Ga0070666_10000074
394 Ga0070666_10000209
395 Ga0070680_100000076
396 Ga0070682_100000173
397 Ga0070682_100005061
398 Ga0068868_100004181
399 Ga0068868_100004761
400 Ga0068868_100054568
401 Ga0070687_100002957
402 Ga0070668_100014060
403 Ga0070675_100008396
404 Ga0070667_100008197
405 Ga0070667_100022628
406 Ga0070662_100003938
407 Ga0068867_100001726
408 Ga0068867_100008986
409 Ga0070679_100001661
410 Ga0070684_100000495
411 Ga0068853_100011603
412 Ga0070672_100000738
413 Ga0070693_100005830
414 Ga0070665_100000001
415 Ga0070665_100000041
416 Ga0068855_100000089
417 Ga0068855_100001157
418 Ga0068855_100004081
419 Ga0068855_100016774
420 Ga0068855_100088399
421 Ga0068857_100000416
422 Ga0068857_100008582
423 Ga0068854_100022140
424 Ga0068856_100033066
425 Ga0070702_100016135
426 Ga0068852_100071706
427 Ga0068859_100000064
428 Ga0068859_100001471
429 Ga0068851_10003846
430 Ga0068863_100000858
431 Ga0068858_100007741
432 Ga0068860_100000111
433 Ga0068860_100000208
434 Ga0068860_100007897
435 Ga0068860_100009196
436 Ga0068860_100079244
437 Ga0097621_100008646
438 Ga0068871_100009309
439 Ga0068871_100042935
440 Ga0068865_100009268
441 Ga0097620_100000064
442 Ga0097620_100001471
443 Ga0105240_10000074
444 Ga0105240_10000147
445 Ga0105240_10000168
446 Ga0105240_10000224
447 Ga0105240_10002252
448 Ga0105240_10002663
449 Ga0105240_10004368
450 Ga0105240_10024459
451 Ga0105240_10029873
452 Ga0105240_10032320
453 Ga0111539_10051901
454 Ga0105245_10056272
455 Ga0105245_10073256
456 Ga0105247_10004954
457 Ga0114129_10001869
458 Ga0105241_10000224
459 Ga0105241_10000286
460 Ga0105241_10001283
461 Ga0105241_10005064
462 Ga0105242_10021375
463 Ga0105237_10000052
464 Ga0105237_10001529
465 Ga0105237_10001565
466 Ga0105237_10002860
467 Ga0105237_10006124
468 Ga0105237_10019356
469 Ga0105237_10035475
470 Ga0105237_10042489
471 Ga0105238_10004027
472 Ga0105238_10008004
473 Ga0105238_10029869
474 Ga0105249_10008293
475 Ga0105249_10008850
476 Ga0105239_10000048
477 Ga0105239_10000370
478 Ga0105239_10000785
479 Ga0105239_10000981
480 Ga0105239_10001154
481 Ga0105239_10001973
482 Ga0105239_10028742
483 Ga0105239_10029990
484 Ga0105239_10030798
485 Ga0105239_10095251
486 Ga0157373_10000074
487 Ga0157373_10001608
488 Ga0157373_10018799
489 Ga0157371_10000046
490 Ga0157371_10003822
491 Ga0157371_10003853
492 Ga0157371_10004981
493 Ga0157370_10001393
494 Ga0157370_10013384
495 Ga0157370_10016405
496 Ga0157370_10027772
497 Ga0157370_10041160
498 Ga0157370_10049307
499 Ga0157369_10000046
500 Ga0157374_10000001
501 Ga0157374_10000002
502 Ga0157374_10007111
503 Ga0157378_10010269
504 Ga0157378_10012218
505 Ga0157378_10019168
506 Ga0163162_10000037
507 Ga0163162_10000100
508 Ga0163162_10000101
509 Ga0163162_10000190
510 Ga0163162_10001171
511 Ga0157372_10002055
512 Ga0157372_10011468
513 Ga0157372_10018556
514 Ga0157372_10028893
515 Ga0157372_10043490
516 Ga0157375_10016252
517 Ga0163163_10000254
518 Ga0163163_10013741
519 Ga0157380_10000003
520 Ga0157380_10009623
521 Ga0182008_10000002
522 Ga0157379_10000367
523 Ga0157376_10000135
524 Ga0157376_10000526
525 Ga0157376_10001835
526 Ga0157376_10004235
527 Ga0157376_10013394
528 Ga0182006_1000132
529 Ga0182006_1000229
530 Ga0182006_1002723
531 Ga0182006_1016315
532 Ga0182007_10000009
533 Ga0182007_10002605
534 Ga0182005_1000023
535 Ga0183373_1009
536 Ga0163161_10000973
537 Ga0163161_10001103
538 Ga0207425_1000008
539 Ga0209646_1000025
540 Ga0209646_1002047
541 Ga0209026_1000097
542 Ga0209129_1000042
543 Ga0209676_1000009
544 Ga0209025_1000020
545 Ga0209758_1000022
546 Ga0209758_1011896
547 Ga0209050_1000103
548 Ga0207426_1000164
549 Ga0207426_1000220
550 Ga0207680_10000034
551 Ga0207680_10004030
552 Ga0207647_10012780
553 Ga0207647_10026742
554 Ga0207645_10003311
555 Ga0207705_10013472
556 Ga0207654_10000259
557 Ga0207654_10001139
558 Ga0207654_10001938
559 Ga0207707_10000574
560 Ga0207707_10082232
561 Ga0207695_10000023
562 Ga0207695_10000031
563 Ga0207695_10000071
564 Ga0207695_10000084
565 Ga0207695_10000110
566 Ga0207695_10000323
567 Ga0207695_10000812
568 Ga0207695_10007886
569 Ga0207695_10011843
570 Ga0207695_10043162
571 Ga0207671_10001497
572 Ga0207671_10003626
573 Ga0207671_10005086
574 Ga0207671_10006883
575 Ga0207671_10008560
576 Ga0207671_10011632
577 Ga0207671_10011826
578 Ga0207671_10021755
579 Ga0207660_10002766
580 Ga0207662_10010949
581 Ga0207652_10001002
582 Ga0207694_10051075
583 Ga0207650_10008227
584 Ga0207706_10014550
585 Ga0207691_10002120
586 Ga0207691_10074499
587 Ga0207689_10000835
588 Ga0207689_10049282
589 Ga0207667_10000135
590 Ga0207667_10000144
591 Ga0207667_10000177
592 Ga0207667_10003934
593 Ga0207667_10014193
594 Ga0207668_10001106
595 Ga0207658_10014873
596 Ga0207658_10015884
597 Ga0207677_10002069
598 Ga0207677_10019927
599 Ga0207639_10021266
600 Ga0207702_10029094
601 Ga0207641_10000082
602 Ga0207641_10013439
603 Ga0207648_10006588
604 Ga0207648_10053881
605 Ga0207674_10004100
606 Ga0207674_10025815
607 Ga0207683_10018194
608 Ga0207698_10031965
609 Ga0207698_10034332
610 Ga0268266_10000014
611 Ga0268266_10000049
612 Ga0268264_10000041
613 Ga0268264_10006410
614 Ga0268264_10012050
615 Ga0268264_10059208
616 Ga0307517_10002048
617 Ga0307515_10000002
618 Ga0307515_10000412
619 Ga0307511_10000042
620 Ga0307511_10001595
621 Ga0265327_10000531
622 Ga0307509_10028767
623 Ga0307508_10000559
624 Ga0307516_10001770
625 Ga0307516_10059710
626 Ga0307405_10000016
627 Ga0307407_10000006
628 Ga0307412_10000038
629 Ga0307416_100000032
630 Ga0307414_10000378
631 Ga0307414_10001361
632 Ga0307414_10001512
633 Ga0307414_10011444
634 Ga0307510_10000091
635 Ga0307510_10029406
636 Ga0439431_0004819
637 Ga0439457_000387
638 Ga0451577_0000870
639 Ga0451577_0075318
640 Ga0466969_0000238
641 Ga0466972_0000207
642 Ga0466972_0001912
643 Ga0466966_0000136
644 Ga0453684_0072679
645 Ga0453684_0209027
646 Ga0466959_0000002
647 Ga0451576_0014471
648 Ga0495638_0036254
649 Ga0495606_0002804
650 Ga0495606_0008121
651 Ga0495610_0000231
652 Ga0495610_0002800
653 Ga0495648_0002333
654 Ga0495648_0004547
655 Ga0495633_0039993
656 Ga0495668_0000310
657 Ga0495668_0000720
658 Ga0495668_0000751
659 Ga0495611_0000100
660 Ga0495611_0000844
661 Ga0495674_0024846
662 Ga0495687_000001
663 Ga0495686_0000004
664 Ga0495686_0000271
665 Ga0496121_0000010
666 Ga0501034_0000277
667 Ga0501034_0011261
668 Ga0501037_0006260
669 Ga0501047_0014119
670 Ga0501047_0020877
671 Ga0501047_0089348
672 Ga0501035_0035195
673 Ga0501044_0128965
674 Ga0501284_00011
675 nmdc:mga05p37_1503_c1
676 Ga0500578_0000034
677 Ga0500646_0000342
678 Ga0500646_0007216
679 Ga0500583_0000059
680 Ga0500583_0000346
681 Ga0500583_0000533
682 Ga0500651_0000229
683 Ga0500642_0002628
684 Ga0500622_0001749
685 Ga0501082_0043530
686 2586210588
687 2738727072
688 2738761914
689 2738854773
690 2739303905
691 2739587703
692 2739617583
693 2739648043
694 2776615442
695 2819545606
696 2819572422
697 2819680596
698 2840677779
699 2842724508
700 2842911998
701 2849283636
702 2852630810
703 2857630030
704 2883071091
705 2884797978
706 2896085597
707 2896113802
708 2902050930
709 2904448104
710 2904472331
711 2929182888
712 2929927300
713 2945978843
714 2945998642
715 2946015291
716 2954021094
717 8003151185

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00912

Transgly

Transglycosylase

59

237

0.95

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

415

662

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.9586 74 260
2oqo-assembly1.cif.gz_A-2 crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis 0.9539 74 260
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.9533 74 260
3nb7-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with decarboxylated neryl moenomycin 0.9448 76 260
3nb6-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with methylphosphoryl neryl moenomycin 0.9344 74 260
ID Description Score Start End Superfamily
3d3hA00 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9586 74 260 1.10.3810.10
3d3hA00 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9533 74 260 1.10.3810.10
af_P76577_56_250_1.10.3810.10 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9145 61 267 1.10.3810.10
3fwmA02 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9069 74 242 1.10.3810.10
af_P76577_56_250_1.10.3810.10 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9054 61 267 1.10.3810.10
ID Description Score Start End GO Terms
AF-A0A351SS91-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9608 523 713 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A523GHQ7-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.9599 466 713 GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A1C0BVW5-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.9534 77 257 GO:0005886
GO:0008360
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A7C2SV79-F1-model_v4 Penicillin-binding protein 0.9501 526 713 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A3D1H6D1-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.9413 469 733 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0016020
GO:0030288
GO:0071555

Map