F421731

General Info

Members Datasets Scaffolds Average Seq Length
359 237 718 506

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8008574985|8008575160
Length 582
Sequence LPGRTDHVVVVGAGLAGLSAALHLLGAGRRVTVVEREELPGGRAGRLDLGGYRVDTGPTVLTMPDLADEAFAAVGDSLYERVELIPLHPAYRACFADGSSLDVHTGAEAMAAEVERFAGPGEAAGYRRLRDWLERLYRAQMRRFIDANFDSPLGLLTPDLARLAALGGFGRLDARIGRFLSDERLRRVFSFQALYAGVPPARALAAYAVIAYMDTVAGVYFPRGGMHALPRAMADAAAAAGADLRYGQRVTRLERSGERVTAVVTDAGRIACDAVVLTPDLPVAYRLLGRRPRRPLRLRHSPSAFVLHVGTDRTWPRLAHHTIMFGAAWHTTFDELTRAGRLMSDPSLLVTRPTATDPGLAPPGRHLHYILAPCPNTDIGPDAAAWSDLGPRYRDSLLRELARRGLEGVADAVEEECLVTPAEWHAQGHAAGTPFSAAHTFAQTGPFRPRNLVRGTENAVLAGCGTTPGVGVPTVLLSGKLAAARVTGVTGRHGITRPLPPRPAASATVPDRSGLRALAGSPGPSPSSEAALGVCDTAPGRADGPQEPPLSPACPPVAAARSEPPQSPPADPAAPTTEGRTR

Samples

Sample ID Description Type Environment
1 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300012507 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610 Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
57 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
60 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
98 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
104 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
105 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
108 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
109 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
110 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
111 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
112 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
113 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
114 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
115 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
116 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
119 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
120 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
121 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
122 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
123 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
124 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
125 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
126 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
129 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
130 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
131 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
134 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
135 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
136 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
137 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
146 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
164 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
167 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
168 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
169 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
170 2547132424 Nocardia nova SH22a Isolate Unclassified
171 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
172 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
173 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
174 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
175 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
176 2643221548 Streptomyces sp. Root55 Isolate Unclassified
177 2643221578 Streptomyces sp. Root63 Isolate Unclassified
178 2643221647 Streptomyces sp. Root369 Isolate Unclassified
179 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
180 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
181 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
182 2643221714 Streptomyces sp. Root264 Isolate Unclassified
183 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
184 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
185 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
186 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
187 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
188 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
189 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
190 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
191 2808606448 Streptomyces sp. 193411 Isolate Unclassified
192 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
193 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
194 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
195 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
196 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
197 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
198 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
199 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
200 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
201 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
202 2867428634 Streptomyces sp. RP5T Isolate Unclassified
203 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
204 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
205 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
206 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
207 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
208 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
209 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
210 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
211 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
212 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
213 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
214 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
215 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
216 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
217 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
218 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
219 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
220 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
221 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
222 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
223 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
224 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
225 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
226 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
227 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
228 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
229 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
230 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
231 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
232 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
233 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
234 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
235 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
236 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
237 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 79.67
Metatranscriptomes 0
Isolates 20.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.91
Nodule 0.56
Rhizoplane 7.24
Rhizosphere 69.08
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24744J21845_10004898 3300002077 Bacteria 2771
2 rootH1_10043336 3300003323 Bacteria 2847
3 JGI25160J50197_1008517 3300003354 Bacteria 3902
4 JGI25160J50197_1008598 3300003354 Bacteria 3877
5 Ga0055540_1002072 3300003792 Bacteria 11042
6 Ga0055540_1003668 3300003792 Bacteria 7304
7 Ga0070658_10059705 3300005327 Bacteria 3105
8 Ga0070682_100010946 3300005337 Bacteria 5169
9 Ga0070682_100041209 3300005337 Bacteria 2845
10 Ga0068868_100079943 3300005338 Bacteria 2619
11 Ga0068868_100103884 3300005338 Bacteria 2302
12 Ga0070661_100059886 3300005344 Bacteria 2793
13 Ga0070668_100019914 3300005347 Bacteria 5056
14 Ga0070668_100021020 3300005347 Bacteria 4931
15 Ga0070668_100146685 3300005347 Bacteria 1905
16 Ga0070675_100112037 3300005354 Bacteria 2310
17 Ga0070671_100002174 3300005355 Bacteria 15134
18 Ga0070688_100006614 3300005365 Bacteria 6205
19 Ga0070688_100008312 3300005365 Bacteria 5630
20 Ga0070667_100004741 3300005367 Bacteria 11395
21 Ga0070710_10096947 3300005437 Bacteria 1749
22 Ga0070711_100039762 3300005439 Bacteria 3169
23 Ga0070694_100064947 3300005444 Bacteria 2499
24 Ga0070663_100005885 3300005455 Bacteria 7334
25 Ga0070663_100007163 3300005455 Bacteria 6774
26 Ga0070663_100034146 3300005455 Bacteria 3521
27 Ga0070678_100022456 3300005456 Bacteria 4182
28 Ga0070678_100146078 3300005456 Bacteria 1899
29 Ga0070662_100040763 3300005457 Bacteria 3308
30 Ga0068867_100058042 3300005459 Bacteria 2868
31 Ga0070685_10031669 3300005466 Bacteria 2957
32 Ga0068853_100007448 3300005539 Bacteria 8759
33 Ga0070665_100046375 3300005548 Bacteria 4367
34 Ga0070665_100098908 3300005548 Bacteria 2922
35 Ga0068854_100004401 3300005578 Bacteria 8889
36 Ga0068856_100031199 3300005614 Bacteria 5213
37 Ga0068852_100198658 3300005616 Bacteria 1897
38 Ga0068859_100082625 3300005617 Bacteria 3255
39 Ga0068864_100088009 3300005618 Bacteria 2735
40 Ga0068866_10004759 3300005718 Bacteria 5570
41 Ga0068861_100025244 3300005719 Bacteria 4308
42 Ga0068870_10030276 3300005840 Bacteria 2734
43 Ga0068858_100168374 3300005842 Bacteria 2065
44 Ga0081455_10080245 3300005937 Bacteria 2676
45 Ga0075363_100000243 3300006048 Bacteria 15356
46 Ga0075363_100000469 3300006048 Bacteria 12665
47 Ga0075363_100006331 3300006048 Bacteria 5363
48 Ga0075364_10003467 3300006051 Bacteria 8977
49 Ga0075364_10013455 3300006051 Bacteria 5031
50 Ga0075364_10029438 3300006051 Bacteria 3522
51 Ga0070712_100038341 3300006175 Bacteria 3274
52 Ga0070712_100038682 3300006175 Bacteria 3261
53 Ga0075369_10000231 3300006186 Bacteria 16454
54 Ga0075369_10013143 3300006186 Bacteria 3279
55 Ga0075369_10013655 3300006186 Bacteria 3230
56 Ga0075369_10024374 3300006186 Bacteria 2506
57 Ga0075369_10025533 3300006186 Bacteria 2457
58 Ga0097621_100041486 3300006237 Bacteria 3705
59 Ga0075370_10004730 3300006353 Bacteria 6654
60 Ga0075370_10010407 3300006353 Bacteria 4864
61 Ga0068865_100030847 3300006881 Bacteria 3569
62 Ga0097620_100082626 3300006931 Bacteria 3255
63 Ga0099826_10064036 3300006948 Bacteria 2372
64 Ga0105245_10014867 3300009098 Bacteria 6779
65 Ga0105245_10015707 3300009098 Bacteria 6601
66 Ga0105245_10085744 3300009098 Bacteria 2887
67 Ga0105245_10190769 3300009098 Bacteria 1963
68 Ga0105243_10050646 3300009148 Bacteria 3282
69 Ga0105238_10302041 3300009551 Bacteria 1584
70 Ga0105249_10004907 3300009553 Bacteria 11545
71 Ga0105239_10028934 3300010375 Bacteria 6090
72 Ga0105246_10128407 3300011119 Bacteria 1890
73 Ga0157342_1001504 3300012507 Bacteria 1744
74 Ga0157369_10185205 3300013105 Bacteria 2190
75 Ga0157374_10055383 3300013296 Bacteria 3701
76 Ga0163162_10011029 3300013306 Bacteria 8803
77 Ga0157375_10120366 3300013308 Bacteria 2734
78 Ga0163163_10028914 3300014325 Bacteria 5328
79 Ga0163163_10127694 3300014325 Bacteria 2581
80 Ga0157377_10004688 3300014745 Bacteria 6326
81 Ga0183367_1011 3300015688 Bacteria 397353
82 Ga0213873_10000069 3300021358 Bacteria 22106
83 Ga0213876_10016995 3300021384 Bacteria 3843
84 Ga0213876_10030684 3300021384 Bacteria 2836
85 Ga0213875_10000494 3300021388 Bacteria 33185
86 Ga0213875_10001025 3300021388 Bacteria 19827
87 Ga0213875_10003638 3300021388 Bacteria 8714
88 Ga0213875_10014579 3300021388 Bacteria 3833
89 Ga0207426_1000664 3300025302 Bacteria 42204
90 Ga0207426_1002863 3300025302 Bacteria 10255
91 Ga0207426_1009226 3300025302 Bacteria 3921
92 Ga0207426_1013226 3300025302 Bacteria 3065
93 Ga0209051_1002712 3300025303 Bacteria 12316
94 Ga0209051_1003282 3300025303 Bacteria 10728
95 Ga0209051_1003392 3300025303 Bacteria 10452
96 Ga0209051_1015787 3300025303 Bacteria 3459
97 Ga0207656_10022501 3300025321 Bacteria 2529
98 Ga0207692_10027918 3300025898 Bacteria 2663
99 Ga0207688_10000568 3300025901 Bacteria 18123
100 Ga0207688_10021867 3300025901 Bacteria 3498
101 Ga0207643_10009350 3300025908 Bacteria 5267
102 Ga0207705_10130096 3300025909 Bacteria 1873
103 Ga0207693_10000258 3300025915 Bacteria 48916
104 Ga0207663_10005721 3300025916 Bacteria 6289
105 Ga0207657_10047326 3300025919 Bacteria 3762
106 Ga0207694_10073858 3300025924 Bacteria 2669
107 Ga0207687_10034365 3300025927 Bacteria 3442
108 Ga0207644_10003464 3300025931 Bacteria 10198
109 Ga0207706_10010629 3300025933 Bacteria 8407
110 Ga0207706_10027379 3300025933 Bacteria 5097
111 Ga0207669_10052589 3300025937 Bacteria 2448
112 Ga0207704_10050910 3300025938 Bacteria 2501
113 Ga0207665_10001399 3300025939 Bacteria 16225
114 Ga0207711_10111063 3300025941 Bacteria 2438
115 Ga0207689_10005601 3300025942 Bacteria 11190
116 Ga0207689_10030998 3300025942 Bacteria 4455
117 Ga0207658_10013296 3300025986 Bacteria 5621
118 Ga0207658_10144218 3300025986 Bacteria 1931
119 Ga0207677_10025281 3300026023 Bacteria 3702
120 Ga0207703_10029031 3300026035 Bacteria 4363
121 Ga0207678_10010125 3300026067 Bacteria 8273
122 Ga0207678_10012889 3300026067 Bacteria 7338
123 Ga0207678_10018978 3300026067 Bacteria 6041
124 Ga0207678_10140556 3300026067 Bacteria 2060
125 Ga0207702_10086648 3300026078 Bacteria 2732
126 Ga0207641_10009196 3300026088 Bacteria 8151
127 Ga0207641_10105063 3300026088 Bacteria 2494
128 Ga0207648_10011715 3300026089 Bacteria 8246
129 Ga0207648_10067170 3300026089 Bacteria 3127
130 Ga0207676_10060183 3300026095 Bacteria 3003
131 Ga0207674_10160669 3300026116 Bacteria 2201
132 Ga0207675_100004097 3300026118 Bacteria 14105
133 Ga0207675_100014995 3300026118 Bacteria 7232
134 Ga0207675_100189303 3300026118 Bacteria 1973
135 Ga0207683_10156083 3300026121 Bacteria 2061
136 Ga0207698_10117684 3300026142 Bacteria 2242
137 Ga0268266_10024624 3300028379 Bacteria 5120
138 Ga0268264_10094018 3300028381 Bacteria 2591
139 Ga0307511_10002286 3300030521 Bacteria 20032
140 Ga0307513_10006534 3300031456 Bacteria 15227
141 Ga0316576_10010505 3300031727 Bacteria 6020
142 Ga0316576_10016124 3300031727 Bacteria 5038
143 Ga0307411_10005146 3300032005 Bacteria 6388
144 Ga0316583_10004703 3300032133 Bacteria 4872
145 Ga0373941_0012053 3300035115 Bacteria 2251
146 Ga0373931_0027063 3300035691 Bacteria 2923
147 Ga0373937_0128151 3300036401 Bacteria 2369
148 Ga0436364_0426817 3300037853 Bacteria 52455
149 Ga0436364_0499509 3300037853 Bacteria 94496
150 Ga0436364_0907404 3300037853 Bacteria 16111
151 Ga0436364_1375330 3300037853 Bacteria 10166
152 Ga0436364_1531377 3300037853 Bacteria 65823
153 Ga0436365_0087669 3300039437 Bacteria 2388
154 Ga0436365_0502119 3300039437 Bacteria 3664
155 Ga0436365_0977142 3300039437 Bacteria 6176
156 Ga0436365_1826047 3300039437 Bacteria 17805
157 Ga0436362_1080049 3300039453 Bacteria 54319
158 Ga0439436_0010582 3300041404 Bacteria 2811
159 Ga0439466_0001416 3300041411 Bacteria 9351
160 Ga0439466_0001892 3300041411 Bacteria 8195
161 Ga0439465_0000074 3300041413 Bacteria 21675
162 Ga0439465_0000685 3300041413 Bacteria 10379
163 Ga0451789_0913153 3300041443 Bacteria 1779
164 Ga0451853_1570646 3300041512 Bacteria 4897
165 Ga0439433_0000890 3300041999 Bacteria 5949
166 Ga0439449_0006292 3300042007 Bacteria 4538
167 Ga0439457_000923 3300042014 Bacteria 8869
168 Ga0450894_000107 3300042131 Bacteria 14158
169 Ga0450898_000075 3300042134 Bacteria 8786
170 Ga0450903_001262 3300042138 Bacteria 4756
171 Ga0439458_0000512 3300042157 Bacteria 9949
172 Ga0466972_0006369 3300044658 Bacteria 5929
173 Ga0466965_0024022 3300044683 Bacteria 2947
174 Ga0466965_0025158 3300044683 Bacteria 2881
175 Ga0466966_0008099 3300044684 Bacteria 6967
176 Ga0466966_0023045 3300044684 Bacteria 4079
177 Ga0466966_0085728 3300044684 Bacteria 1958
178 Ga0466961_0013444 3300044693 Bacteria 5243
179 Ga0466961_0037301 3300044693 Bacteria 3118
180 Ga0466963_0003278 3300044694 Bacteria 9226
181 Ga0466963_0022786 3300044694 Bacteria 3970
182 Ga0466964_0037155 3300044706 Bacteria 1955
183 Ga0466964_0058429 3300044706 Bacteria 1599
184 Ga0466971_0009391 3300044719 Bacteria 4273
185 Ga0466968_0000605 3300044735 Bacteria 12223
186 Ga0466968_0005378 3300044735 Bacteria 4791
187 Ga0466970_0000911 3300044765 Bacteria 14307
188 Ga0466970_0021384 3300044765 Bacteria 3369
189 Ga0466957_0007354 3300044842 Bacteria 6226
190 Ga0466957_0016842 3300044842 Bacteria 4276
191 Ga0466957_0022079 3300044842 Bacteria 3753
192 Ga0466957_0038394 3300044842 Bacteria 2885
193 Ga0466960_0001276 3300044901 Bacteria 9123
194 Ga0466960_0003854 3300044901 Bacteria 5815
195 Ga0466960_0020862 3300044901 Bacteria 2910
196 Ga0466960_0068367 3300044901 Bacteria 1762
197 Ga0466959_0016118 3300045049 Bacteria 5453
198 Ga0466959_0027564 3300045049 Bacteria 4213
199 Ga0466959_0115045 3300045049 Bacteria 1916
200 Ga0466958_0005551 3300045836 Bacteria 6800
201 Ga0466958_0019025 3300045836 Bacteria 3994
202 Ga0466958_0031862 3300045836 Bacteria 3133
203 Ga0466958_0086764 3300045836 Bacteria 1932
204 Ga0466967_0000587 3300045976 Bacteria 18002
205 Ga0466967_0011453 3300045976 Bacteria 6718
206 Ga0466967_0116516 3300045976 Bacteria 2461
207 Ga0466967_0191057 3300045976 Bacteria 1935
208 Ga0466967_0201843 3300045976 Bacteria 1884
209 Ga0466967_0283848 3300045976 Bacteria 1589
210 Ga0495650_0016634 3300046471 Bacteria 3718
211 Ga0495581_0046015 3300047315 Bacteria 2522
212 Ga0495676_0055872 3300047321 Bacteria 3127
213 Ga0495686_0004693 3300047472 Bacteria 11087
214 Ga0495593_0025922 3300047673 Bacteria 3243
215 Ga0496101_0017837 3300048904 Bacteria 4818
216 Ga0496102_0008142 3300048905 Bacteria 8970
217 Ga0496102_0044135 3300048905 Bacteria 4045
218 Ga0496102_0052640 3300048905 Bacteria 3710
219 Ga0496102_0082341 3300048905 Bacteria 2968
220 Ga0496103_0133542 3300048906 Bacteria 1586
221 Ga0496104_0011737 3300048907 Bacteria 7860
222 Ga0496104_0013226 3300048907 Bacteria 7440
223 Ga0496105_0020180 3300048908 Bacteria 5382
224 Ga0496105_0077569 3300048908 Bacteria 2744
225 Ga0496108_0000520 3300048911 Bacteria 30186
226 Ga0496108_0005604 3300048911 Bacteria 10160
227 Ga0496108_0073788 3300048911 Bacteria 2880
228 Ga0496109_0000679 3300048912 Bacteria 28265
229 Ga0496109_0006834 3300048912 Bacteria 9619
230 Ga0496109_0008487 3300048912 Bacteria 8733
231 Ga0496109_0146136 3300048912 Bacteria 2212
232 Ga0496110_0011120 3300048913 Bacteria 7353
233 Ga0496110_0019333 3300048913 Bacteria 5730
234 Ga0496110_0281752 3300048913 Bacteria 1513
235 Ga0496111_0113228 3300048914 Bacteria 1999
236 Ga0496112_0005252 3300048915 Bacteria 11153
237 Ga0496112_0006797 3300048915 Bacteria 10082
238 Ga0496113_0015815 3300048916 Bacteria 5199
239 Ga0496113_0042299 3300048916 Bacteria 3366
240 Ga0501031_0004573 3300049568 Bacteria 8975
241 Ga0501032_0063256 3300049569 Bacteria 2477
242 Ga0501033_0013592 3300049570 Bacteria 6196
243 Ga0501033_0047114 3300049570 Bacteria 3205
244 Ga0501033_0075270 3300049570 Bacteria 2478
245 Ga0501033_0075358 3300049570 Bacteria 2476
246 Ga0501034_0002700 3300049571 Bacteria 20893
247 Ga0501034_0013923 3300049571 Bacteria 8280
248 Ga0501034_0064435 3300049571 Bacteria 3679
249 Ga0501034_0089493 3300049571 Bacteria 3076
250 Ga0501036_0002027 3300049572 Bacteria 15764
251 Ga0501036_0021884 3300049572 Bacteria 5375
252 Ga0501036_0024152 3300049572 Bacteria 5124
253 Ga0501036_0051119 3300049572 Bacteria 3499
254 Ga0501038_0037595 3300049574 Bacteria 4244
255 Ga0501038_0126885 3300049574 Bacteria 2099
256 Ga0501039_0003529 3300049575 Bacteria 11714
257 Ga0501039_0025292 3300049575 Bacteria 4561
258 Ga0501042_0056303 3300049578 Bacteria 2806
259 Ga0501043_0002318 3300049579 Bacteria 16117
260 Ga0501043_0005277 3300049579 Bacteria 10447
261 Ga0501043_0005419 3300049579 Bacteria 10310
262 Ga0501043_0049012 3300049579 Bacteria 3320
263 Ga0501046_0007783 3300049580 Bacteria 9399
264 Ga0501047_0012293 3300049581 Bacteria 8101
265 Ga0501047_0016099 3300049581 Bacteria 7132
266 Ga0501047_0046616 3300049581 Bacteria 4189
267 Ga0501070_0033199 3300049586 Bacteria 4318
268 Ga0501073_0029551 3300049589 Bacteria 3916
269 Ga0501074_0000555 3300049590 Bacteria 23047
270 Ga0501080_0093015 3300049742 Bacteria 2800
271 Ga0501035_0016633 3300049822 Bacteria 6782
272 Ga0501035_0016721 3300049822 Bacteria 6762
273 Ga0501035_0049249 3300049822 Bacteria 3776
274 Ga0501044_0002203 3300049823 Bacteria 22353
275 Ga0501044_0009205 3300049823 Bacteria 10788
276 Ga0501044_0016459 3300049823 Bacteria 7937
277 Ga0501044_0117120 3300049823 Bacteria 2668
278 nmdc:mga03n38_12122_c1 3300050490 Bacteria 3235
279 nmdc:mga03n38_3369_c1 3300050490 Bacteria 5121
280 nmdc:mga00v17_1895_c1 3300050491 Bacteria 10828
281 nmdc:mga00v17_2271_c1 3300050491 Bacteria 9858
282 nmdc:mga00v17_46014_c1 3300050491 Bacteria 2639
283 nmdc:mga07m45_4192_c2 3300050496 Bacteria 4915
284 nmdc:mga0sz30_8208_c2 3300050516 Bacteria 3535
285 Ga0466962_0002281 3300061719 Bacteria 9089
286 Ga0466962_0009799 3300061719 Bacteria 4596
287 8008575160 8008574985 Bacteria 7815457
288 2547405521 2547132111 Bacteria 8013147
289 2547410770 2547132111 Bacteria 8013147
290 2548696116 2547132424 Bacteria 8348532
291 2552109874 2551306166 Bacteria 9731570
292 2554260869 2554235005 Bacteria 6457341
293 2558911999 2558860112 Bacteria 9931328
294 2585308021 2582581313 Bacteria 10042643
295 2616906399 2616644941 Bacteria 8510691
296 2616906472 2616644941 Bacteria 8510691
297 2643766079 2643221548 Bacteria 8053412
298 2643900816 2643221578 Bacteria 9213798
299 2644266529 2643221647 Bacteria 10741251
300 2644402108 2643221673 Bacteria 9196637
301 2644463536 2643221682 Bacteria 6743283
302 2644490776 2643221687 Bacteria 6500351
303 2644627369 2643221714 Bacteria 9015452
304 2644637068 2643221715 Bacteria 6671032
305 2753070285 2751185734 Bacteria 8863695
306 2784592051 2784132148 Bacteria 8627943
307 2785373898 2784746768 Bacteria 10036182
308 2786666966 2786546132 Bacteria 10419719
309 2795784337 2795385470 Bacteria 8317180
310 2804843384 2802429296 Bacteria 7227771
311 2808917261 2808606375 Bacteria 9466072
312 2809229396 2808606448 Bacteria 8656184
313 2809235729 2808606448 Bacteria 8656184
314 2812356299 2811994879 Bacteria 9313447
315 2812477729 2811994917 Bacteria 7761064
316 2816504225 2816332139 Bacteria 9138787
317 2819695810 2818991463 Bacteria 7948711
318 2842136108 2842134933 Bacteria 5847019
319 2852641988 2852635781 Bacteria 8251373
320 2862178675 2862178590 Bacteria 8583590
321 2862282044 2862281513 Bacteria 9621493
322 2862515686 2862507626 Bacteria 9425308
323 2863410924 2863404153 Bacteria 9672205
324 2867434440 2867428634 Bacteria 9590268
325 2870729910 2870721527 Bacteria 9689237
326 2873158322 2873151551 Bacteria 8625867
327 2875398425 2875391855 Bacteria 7600475
328 2877677080 2877676314 Bacteria 9512378
329 2891328566 2891326441 Bacteria 6439512
330 2902799652 2902799365 Bacteria 5419524
331 2902814782 2902810491 Bacteria 6794147
332 2902838556 2902837492 Bacteria 6697721
333 2912721146 2912715099 Bacteria 9460473
334 2912728888 2912723979 Bacteria 8557534
335 2912764589 2912757875 Bacteria 7940295
336 2918501243 2918501144 Bacteria 8668083
337 2919470818 2919468124 Bacteria 9133025
338 2919716579 2919713450 Bacteria 7431245
339 2929218510 2929212328 Bacteria 7708288
340 2946045875 2946045630 Bacteria 8527308
341 2946069566 2946064051 Bacteria 8957905
342 2946072807 2946072368 Bacteria 8999607
343 2954682051 2954673503 Bacteria 9685905
344 2954690874 2954682443 Bacteria 9862841
345 2954692283 2954691527 Bacteria 10720516
346 2954707349 2954701450 Bacteria 10834262
347 2954719371 2954711539 Bacteria 10867210
348 2954729342 2954721474 Bacteria 10456478
349 2954732466 2954731030 Bacteria 10243860
350 2954748243 2954740390 Bacteria 10229294
351 2954751345 2954749733 Bacteria 10366972
352 2954767368 2954759201 Bacteria 9358192
353 2966599082 2966598605 Bacteria 7676064
354 2990092449 2990088156 Bacteria 6657676
355 3006425530 3006425503 Bacteria 6491253
356 3006489310 3006486233 Bacteria 8157040
357 8023623858 8023623736 Bacteria 8593882
358 8025416729 8025413630 Bacteria 7014048
359 8025536003 8025530807 Bacteria 8495698
360 JGI24744J21845_10004898
361 rootH1_10043336
362 JGI25160J50197_1008517
363 JGI25160J50197_1008598
364 Ga0055540_1002072
365 Ga0055540_1003668
366 Ga0070658_10059705
367 Ga0070682_100010946
368 Ga0070682_100041209
369 Ga0068868_100079943
370 Ga0068868_100103884
371 Ga0070661_100059886
372 Ga0070668_100019914
373 Ga0070668_100021020
374 Ga0070668_100146685
375 Ga0070675_100112037
376 Ga0070671_100002174
377 Ga0070688_100006614
378 Ga0070688_100008312
379 Ga0070667_100004741
380 Ga0070710_10096947
381 Ga0070711_100039762
382 Ga0070694_100064947
383 Ga0070663_100005885
384 Ga0070663_100007163
385 Ga0070663_100034146
386 Ga0070678_100022456
387 Ga0070678_100146078
388 Ga0070662_100040763
389 Ga0068867_100058042
390 Ga0070685_10031669
391 Ga0068853_100007448
392 Ga0070665_100046375
393 Ga0070665_100098908
394 Ga0068854_100004401
395 Ga0068856_100031199
396 Ga0068852_100198658
397 Ga0068859_100082625
398 Ga0068864_100088009
399 Ga0068866_10004759
400 Ga0068861_100025244
401 Ga0068870_10030276
402 Ga0068858_100168374
403 Ga0081455_10080245
404 Ga0075363_100000243
405 Ga0075363_100000469
406 Ga0075363_100006331
407 Ga0075364_10003467
408 Ga0075364_10013455
409 Ga0075364_10029438
410 Ga0070712_100038341
411 Ga0070712_100038682
412 Ga0075369_10000231
413 Ga0075369_10013143
414 Ga0075369_10013655
415 Ga0075369_10024374
416 Ga0075369_10025533
417 Ga0097621_100041486
418 Ga0075370_10004730
419 Ga0075370_10010407
420 Ga0068865_100030847
421 Ga0097620_100082626
422 Ga0099826_10064036
423 Ga0105245_10014867
424 Ga0105245_10015707
425 Ga0105245_10085744
426 Ga0105245_10190769
427 Ga0105243_10050646
428 Ga0105238_10302041
429 Ga0105249_10004907
430 Ga0105239_10028934
431 Ga0105246_10128407
432 Ga0157342_1001504
433 Ga0157369_10185205
434 Ga0157374_10055383
435 Ga0163162_10011029
436 Ga0157375_10120366
437 Ga0163163_10028914
438 Ga0163163_10127694
439 Ga0157377_10004688
440 Ga0183367_1011
441 Ga0213873_10000069
442 Ga0213876_10016995
443 Ga0213876_10030684
444 Ga0213875_10000494
445 Ga0213875_10001025
446 Ga0213875_10003638
447 Ga0213875_10014579
448 Ga0207426_1000664
449 Ga0207426_1002863
450 Ga0207426_1009226
451 Ga0207426_1013226
452 Ga0209051_1002712
453 Ga0209051_1003282
454 Ga0209051_1003392
455 Ga0209051_1015787
456 Ga0207656_10022501
457 Ga0207692_10027918
458 Ga0207688_10000568
459 Ga0207688_10021867
460 Ga0207643_10009350
461 Ga0207705_10130096
462 Ga0207693_10000258
463 Ga0207663_10005721
464 Ga0207657_10047326
465 Ga0207694_10073858
466 Ga0207687_10034365
467 Ga0207644_10003464
468 Ga0207706_10010629
469 Ga0207706_10027379
470 Ga0207669_10052589
471 Ga0207704_10050910
472 Ga0207665_10001399
473 Ga0207711_10111063
474 Ga0207689_10005601
475 Ga0207689_10030998
476 Ga0207658_10013296
477 Ga0207658_10144218
478 Ga0207677_10025281
479 Ga0207703_10029031
480 Ga0207678_10010125
481 Ga0207678_10012889
482 Ga0207678_10018978
483 Ga0207678_10140556
484 Ga0207702_10086648
485 Ga0207641_10009196
486 Ga0207641_10105063
487 Ga0207648_10011715
488 Ga0207648_10067170
489 Ga0207676_10060183
490 Ga0207674_10160669
491 Ga0207675_100004097
492 Ga0207675_100014995
493 Ga0207675_100189303
494 Ga0207683_10156083
495 Ga0207698_10117684
496 Ga0268266_10024624
497 Ga0268264_10094018
498 Ga0307511_10002286
499 Ga0307513_10006534
500 Ga0316576_10010505
501 Ga0316576_10016124
502 Ga0307411_10005146
503 Ga0316583_10004703
504 Ga0373941_0012053
505 Ga0373931_0027063
506 Ga0373937_0128151
507 Ga0436364_0426817
508 Ga0436364_0499509
509 Ga0436364_0907404
510 Ga0436364_1375330
511 Ga0436364_1531377
512 Ga0436365_0087669
513 Ga0436365_0502119
514 Ga0436365_0977142
515 Ga0436365_1826047
516 Ga0436362_1080049
517 Ga0439436_0010582
518 Ga0439466_0001416
519 Ga0439466_0001892
520 Ga0439465_0000074
521 Ga0439465_0000685
522 Ga0451789_0913153
523 Ga0451853_1570646
524 Ga0439433_0000890
525 Ga0439449_0006292
526 Ga0439457_000923
527 Ga0450894_000107
528 Ga0450898_000075
529 Ga0450903_001262
530 Ga0439458_0000512
531 Ga0466972_0006369
532 Ga0466965_0024022
533 Ga0466965_0025158
534 Ga0466966_0008099
535 Ga0466966_0023045
536 Ga0466966_0085728
537 Ga0466961_0013444
538 Ga0466961_0037301
539 Ga0466963_0003278
540 Ga0466963_0022786
541 Ga0466964_0037155
542 Ga0466964_0058429
543 Ga0466971_0009391
544 Ga0466968_0000605
545 Ga0466968_0005378
546 Ga0466970_0000911
547 Ga0466970_0021384
548 Ga0466957_0007354
549 Ga0466957_0016842
550 Ga0466957_0022079
551 Ga0466957_0038394
552 Ga0466960_0001276
553 Ga0466960_0003854
554 Ga0466960_0020862
555 Ga0466960_0068367
556 Ga0466959_0016118
557 Ga0466959_0027564
558 Ga0466959_0115045
559 Ga0466958_0005551
560 Ga0466958_0019025
561 Ga0466958_0031862
562 Ga0466958_0086764
563 Ga0466967_0000587
564 Ga0466967_0011453
565 Ga0466967_0116516
566 Ga0466967_0191057
567 Ga0466967_0201843
568 Ga0466967_0283848
569 Ga0495650_0016634
570 Ga0495581_0046015
571 Ga0495676_0055872
572 Ga0495686_0004693
573 Ga0495593_0025922
574 Ga0496101_0017837
575 Ga0496102_0008142
576 Ga0496102_0044135
577 Ga0496102_0052640
578 Ga0496102_0082341
579 Ga0496103_0133542
580 Ga0496104_0011737
581 Ga0496104_0013226
582 Ga0496105_0020180
583 Ga0496105_0077569
584 Ga0496108_0000520
585 Ga0496108_0005604
586 Ga0496108_0073788
587 Ga0496109_0000679
588 Ga0496109_0006834
589 Ga0496109_0008487
590 Ga0496109_0146136
591 Ga0496110_0011120
592 Ga0496110_0019333
593 Ga0496110_0281752
594 Ga0496111_0113228
595 Ga0496112_0005252
596 Ga0496112_0006797
597 Ga0496113_0015815
598 Ga0496113_0042299
599 Ga0501031_0004573
600 Ga0501032_0063256
601 Ga0501033_0013592
602 Ga0501033_0047114
603 Ga0501033_0075270
604 Ga0501033_0075358
605 Ga0501034_0002700
606 Ga0501034_0013923
607 Ga0501034_0064435
608 Ga0501034_0089493
609 Ga0501036_0002027
610 Ga0501036_0021884
611 Ga0501036_0024152
612 Ga0501036_0051119
613 Ga0501038_0037595
614 Ga0501038_0126885
615 Ga0501039_0003529
616 Ga0501039_0025292
617 Ga0501042_0056303
618 Ga0501043_0002318
619 Ga0501043_0005277
620 Ga0501043_0005419
621 Ga0501043_0049012
622 Ga0501046_0007783
623 Ga0501047_0012293
624 Ga0501047_0016099
625 Ga0501047_0046616
626 Ga0501070_0033199
627 Ga0501073_0029551
628 Ga0501074_0000555
629 Ga0501080_0093015
630 Ga0501035_0016633
631 Ga0501035_0016721
632 Ga0501035_0049249
633 Ga0501044_0002203
634 Ga0501044_0009205
635 Ga0501044_0016459
636 Ga0501044_0117120
637 nmdc:mga03n38_12122_c1
638 nmdc:mga03n38_3369_c1
639 nmdc:mga00v17_1895_c1
640 nmdc:mga00v17_2271_c1
641 nmdc:mga00v17_46014_c1
642 nmdc:mga07m45_4192_c2
643 nmdc:mga0sz30_8208_c2
644 Ga0466962_0002281
645 Ga0466962_0009799
646 8008575160
647 2547405521
648 2547410770
649 2548696116
650 2552109874
651 2554260869
652 2558911999
653 2585308021
654 2616906399
655 2616906472
656 2643766079
657 2643900816
658 2644266529
659 2644402108
660 2644463536
661 2644490776
662 2644627369
663 2644637068
664 2753070285
665 2784592051
666 2785373898
667 2786666966
668 2795784337
669 2804843384
670 2808917261
671 2809229396
672 2809235729
673 2812356299
674 2812477729
675 2816504225
676 2819695810
677 2842136108
678 2852641988
679 2862178675
680 2862282044
681 2862515686
682 2863410924
683 2867434440
684 2870729910
685 2873158322
686 2875398425
687 2877677080
688 2891328566
689 2902799652
690 2902814782
691 2902838556
692 2912721146
693 2912728888
694 2912764589
695 2918501243
696 2919470818
697 2919716579
698 2929218510
699 2946045875
700 2946069566
701 2946072807
702 2954682051
703 2954690874
704 2954692283
705 2954707349
706 2954719371
707 2954729342
708 2954732466
709 2954748243
710 2954751345
711 2954767368
712 2966599082
713 2990092449
714 3006425530
715 3006489310
716 8023623858
717 8025416729
718 8025536003

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

15

487

0.94

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

10

75

0.93

PF00890

FAD_binding_2

FAD binding domain

7

51

0.92

PF01266

DAO

FAD dependent oxidoreductase

7

485

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
6aa8-assembly1.cif.gz_F crystal structure of (s)-3-hydroxybutyryl-coenzymea dehydrogenase from clostridium acetobutylicum complexed with nad+ 1.001 10 38
4j0e-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p1 space group 0.9918 8 37
1vkz-assembly2.cif.gz_B crystal structure of phosphoribosylamine--glycine ligase (tm1250) from thermotoga maritima at 2.30 a resolution 0.9753 10 37
4j0e-assembly1.cif.gz_B crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p1 space group 0.9749 7 37
6kq9-assembly1.cif.gz_A a long chain secondary alcohol dehydrogenase of micrococcus luteus 0.9721 7 39
ID Description Score Start End Superfamily
af_A0A0P0V2P7_13_181_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.007 11 46 3.50.50.60
af_P9WFZ3_1_135_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 1.005 10 41 3.40.50.720
af_A0A1D6LYX0_29_117_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9923 8 44 3.50.50.60
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9864 11 38 3.50.50.60
af_A7YT47_359_542_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9837 9 41 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1A3PIN5-F1-model_v4 Phytoene dehydrogenase 0.9836 1 497 GO:0016117
GO:0016491
AF-A0A0Q7NDV4-F1-model_v4 Phytoene dehydrogenase 0.982 1 502 GO:0016020
GO:0016117
GO:0016491
AF-A0A846YIS7-F1-model_v4 Phytoene desaturase 0.981 1 502 GO:0016117
GO:0016491
AF-A0A0Q7NDV4-F1-model_v4 Phytoene dehydrogenase 0.98 1 502 GO:0016020
GO:0016117
GO:0016491
AF-A0A846YIS7-F1-model_v4 Phytoene desaturase 0.9791 1 502 GO:0016117
GO:0016491

Map