F421545

General Info

Members Datasets Scaffolds Average Seq Length
359 286 718 506

Family's Representative Sequence

Representative Sequence 3300025294|Ga0209025_1000616|Ga0209025_100061642
Length 558
Sequence VGNHSFFCFLNKIHINKEVEYSYLSEMFSSNIIYLEYFKLLFKGGHFLNLVHTLSQSVLKHPENTAIVFEGQSYSYSTLNTYVSRFASGLSKLGIEKGDKIALVVGNSPHFIIGLFGALKVGAAVIPVNPLYSPDELIYILTNGDAKAVITLDLFLPLVEKASPILPKIEHFIICETKQDNPYEFTDNKLKSFTNVIGLGDESFQGPELHDDDLAVILYTSGTTGKPKGAMLTHKNLYSNAIDAGHFLGFTSSEKVIATLPAFHVFCLTVALNAPLMYGATVILVPKFSPNEIFNIIRSQKATVFAGVPTMYNFLYQYPEGKTEDFDSIRLCISGGSSLPVALLENFEKKFNVMISEGYGLSEASPVTTFNPLDRPRKAGSIGTNISNVVNRIVNELGEDVKVGEVGELIVQGPNVMKGYYNMPEETAMTIKDGWLYTGDLARQDEDGYFFIVDRKKEMIIVGGFNVYPREVEEILYNHPDVVECAIIGLPDDNFGESVKAYVVSKNPALTEEILIEYCKAHLAKYKVPRSIEFIAELPKNATGKILRRALKESIVQS

Samples

Sample ID Description Type Environment
1 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
31 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
73 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
74 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
75 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
84 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
87 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
88 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
89 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
92 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
93 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
94 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
95 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
96 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
99 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
100 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
101 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
102 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
103 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
104 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
105 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
152 2501939600 Micromonospora sp. L5 Isolate Unclassified
153 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
154 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
155 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
156 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
157 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
158 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
159 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
160 2554235283 Bacillus safensis VK Isolate Rhizosphere
161 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
162 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
163 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
164 2643221729 Bacillus sp. Root11 Isolate Unclassified
165 2643221730 Bacillus sp. Root131 Isolate Unclassified
166 2643221731 Bacillus sp. Root147 Isolate Unclassified
167 2643221732 Bacillus sp. Root239 Isolate Unclassified
168 2643221735 Bacillus sp. Root920 Isolate Unclassified
169 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
170 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
171 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
172 2684622632 Bacillus cereus 905 Isolate Unclassified
173 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
174 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
175 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
176 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
177 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
178 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
179 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
180 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
181 2738541358 Bacillus sp. OV752 Isolate Unclassified
182 2738543006 Bacillus sp. OK077 Isolate Unclassified
183 2738543017 Bacillus sp. OV186 Isolate Unclassified
184 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
185 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
186 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
187 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
188 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
189 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
190 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
191 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
192 2808606448 Streptomyces sp. 193411 Isolate Unclassified
193 2811994870 Bacillus sp. JB4 Isolate Unclassified
194 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
195 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
196 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
197 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
198 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
199 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
200 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
201 2842682962 Bacillus sp. R-72492 Isolate Unclassified
202 2842882022 Bacillus sp. R-71893 Isolate Unclassified
203 2849139964 Bacillus sp. R-71875 Isolate Unclassified
204 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
205 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
206 2857581216 Bacillus sp. R-71922 Isolate Unclassified
207 2857586860 Bacillus sp. R-71935 Isolate Unclassified
208 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
209 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
210 2860837431 Bacillus sp. WR11 Isolate Unclassified
211 2862574272 Streptomyces sp. AcE210 Isolate Nodule
212 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
213 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
214 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
215 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
216 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
217 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
218 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
219 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
220 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
221 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
222 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
223 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
224 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
225 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
226 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
227 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
228 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
229 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
230 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
231 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
232 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
233 2919720352 Priestia megaterium 4340 Isolate Unclassified
234 2919726948 Bacillus pumilus 4489 Isolate Unclassified
235 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
236 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
237 2929004312 Priestia megaterium 1104 Isolate Unclassified
238 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
239 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
240 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
241 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
242 2938917290 Bacillus sp. CR71 Isolate Unclassified
243 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
244 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
245 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
246 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
247 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
248 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
249 2965761152 Bacillus sp. COPE52 Isolate Unclassified
250 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
251 2969141011 Bacillus velezensis MH25 Isolate Unclassified
252 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
253 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
254 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
255 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
256 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
257 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
258 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
259 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
260 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
261 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
262 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
263 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
264 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
265 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
266 649633069 Micromonospora sp. L5 Isolate Unclassified
267 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
268 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
269 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
270 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
271 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
272 8022653035 Bacillus sp. Rc4 Isolate Unclassified
273 8022792930 Bacillus sp. Xin Isolate Rhizosphere
274 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
275 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
276 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
277 8023438354 Bacillus sp. BH2 Isolate Unclassified
278 8023444577 Bacillus sp. BH32 Isolate Unclassified
279 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
280 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
281 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
282 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
283 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
284 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere
285 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
286 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 56.55
Metatranscriptomes 0.56
Isolates 42.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.36
Nodule 0.56
Rhizoplane 7.24
Rhizosphere 55.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209025_1000616 3300025294 Bacteria 63937
2 JGI25159J45721_1003482 3300002987 Bacteria 5554
3 JGI25151J46595_10000009 3300003187 Bacteria 296412
4 JGI25151J46595_10000496 3300003187 Bacteria 37061
5 JGI25151J46595_10000679 3300003187 Bacteria 28742
6 JGI25151J46595_10004504 3300003187 Bacteria 7362
7 JGI25151J46595_10010928 3300003187 Bacteria 4196
8 JGI25151J46595_10032374 3300003187 Bacteria 2027
9 rootH1_10025147 3300003316 Bacteria 10316
10 rootL2_10017596 3300003322 Bacteria 10714
11 rootH1_10036582 3300003323 Bacteria 5242
12 Ga0006562J51391_1001382 3300003578 Bacteria 3710
13 Ga0006562J51391_1003939 3300003578 Bacteria 4676
14 Ga0055532_1000213 3300003758 Bacteria 45732
15 Ga0055532_1004159 3300003758 Bacteria 2253
16 Ga0055536_1007664 3300003781 Bacteria 4785
17 Ga0055528_1005766 3300003790 Bacteria 5706
18 Ga0070683_100002531 3300005329 Bacteria 14580
19 Ga0070668_100002001 3300005347 Bacteria 14891
20 Ga0070709_10000438 3300005434 Bacteria 25206
21 Ga0070714_100001365 3300005435 Bacteria 17680
22 Ga0070714_100137000 3300005435 Bacteria 2193
23 Ga0070713_100003228 3300005436 Bacteria 10740
24 Ga0070710_10004834 3300005437 Bacteria 6371
25 Ga0070711_100001243 3300005439 Bacteria 13783
26 Ga0070708_100075280 3300005445 Bacteria 3046
27 Ga0070706_100001984 3300005467 Bacteria 21101
28 Ga0070706_100004995 3300005467 Bacteria 12696
29 Ga0070707_100012549 3300005468 Bacteria 7914
30 Ga0070684_100018668 3300005535 Bacteria 5719
31 Ga0070684_100108657 3300005535 Bacteria 2485
32 Ga0070684_100253011 3300005535 Bacteria 1610
33 Ga0068856_100020263 3300005614 Bacteria 6458
34 Ga0068864_100098029 3300005618 Bacteria 2596
35 Ga0081540_1007477 3300005983 Bacteria 7778
36 Ga0081539_10011148 3300005985 Bacteria 7168
37 Ga0081539_10039902 3300005985 Bacteria 2764
38 Ga0070717_10041302 3300006028 Bacteria 3760
39 Ga0070717_10056837 3300006028 Bacteria 3234
40 Ga0070715_10010186 3300006163 Bacteria 3341
41 Ga0070716_100001305 3300006173 Bacteria 11011
42 Ga0070712_100003336 3300006175 Bacteria 9864
43 Ga0105251_10012856 3300009011 Bacteria 4710
44 Ga0105250_10003739 3300009092 Bacteria 7145
45 Ga0105247_10042903 3300009101 Bacteria 2771
46 Ga0105243_10002585 3300009148 Bacteria 15110
47 Ga0105237_10240260 3300009545 Bacteria 1812
48 Ga0105238_10047067 3300009551 Bacteria 4350
49 Ga0105239_10171275 3300010375 Bacteria 2428
50 Ga0105246_10019281 3300011119 Bacteria 4357
51 Ga0105246_10049295 3300011119 Bacteria 2883
52 Ga0157371_10003017 3300013102 Bacteria 15630
53 Ga0157370_10044773 3300013104 Bacteria 4250
54 Ga0157378_10020113 3300013297 Bacteria 5871
55 Ga0163162_10002769 3300013306 Bacteria 16648
56 Ga0163163_10291460 3300014325 Bacteria 1684
57 Ga0157377_10030457 3300014745 Bacteria 2923
58 Ga0157376_10152353 3300014969 Bacteria 2086
59 Ga0209784_100178 3300025224 Bacteria 53225
60 Ga0209147_100080 3300025229 Bacteria 196308
61 Ga0209147_103180 3300025229 Bacteria 3366
62 Ga0209673_1003272 3300025273 Bacteria 9772
63 Ga0209130_1000311 3300025284 Bacteria 57319
64 Ga0209130_1005287 3300025284 Bacteria 4543
65 Ga0209130_1013717 3300025284 Bacteria 2066
66 Ga0209676_1000844 3300025292 Bacteria 39621
67 Ga0209676_1001224 3300025292 Bacteria 27208
68 Ga0209025_1000001 3300025294 Bacteria 1888151
69 Ga0209025_1000130 3300025294 Bacteria 198745
70 Ga0209025_1000209 3300025294 Bacteria 140401
71 Ga0209025_1001238 3300025294 Bacteria 35471
72 Ga0209025_1003540 3300025294 Bacteria 14644
73 Ga0209025_1004828 3300025294 Bacteria 11389
74 Ga0209025_1005845 3300025294 Bacteria 9844
75 Ga0209025_1011611 3300025294 Bacteria 5776
76 Ga0209025_1017206 3300025294 Bacteria 4194
77 Ga0207696_1004554 3300025711 Bacteria 5938
78 Ga0207696_1014879 3300025711 Bacteria 2653
79 Ga0207655_1005394 3300025728 Bacteria 8704
80 Ga0207655_1021235 3300025728 Bacteria 3303
81 Ga0207713_1003689 3300025735 Bacteria 10296
82 Ga0207692_10000109 3300025898 Bacteria 24511
83 Ga0207699_10000535 3300025906 Bacteria 18785
84 Ga0207684_10005514 3300025910 Bacteria 11655
85 Ga0207684_10008675 3300025910 Bacteria 9021
86 Ga0207707_10052992 3300025912 Bacteria 3531
87 Ga0207663_10000794 3300025916 Bacteria 14149
88 Ga0207663_10080427 3300025916 Bacteria 2131
89 Ga0207660_10045277 3300025917 Bacteria 3099
90 Ga0207657_10041595 3300025919 Bacteria 4063
91 Ga0207649_10028515 3300025920 Bacteria 3287
92 Ga0207646_10020650 3300025922 Bacteria 6100
93 Ga0207700_10000610 3300025928 Bacteria 20923
94 Ga0207664_10000597 3300025929 Bacteria 25009
95 Ga0207664_10117212 3300025929 Bacteria 2223
96 Ga0207709_10006359 3300025935 Bacteria 6629
97 Ga0207665_10002627 3300025939 Bacteria 12095
98 Ga0207661_10000965 3300025944 Bacteria 18939
99 Ga0207661_10073566 3300025944 Bacteria 2799
100 Ga0207668_10003840 3300025972 Bacteria 8856
101 Ga0207702_10019462 3300026078 Bacteria 5617
102 Ga0207675_100062821 3300026118 Bacteria 3469
103 Ga0307517_10027115 3300028786 Bacteria 6896
104 Ga0307515_10002732 3300028794 Bacteria 37745
105 Ga0237817_10231 3300030083 Bacteria 14044
106 Ga0307512_10002240 3300030522 Bacteria 25147
107 Ga0307516_10052337 3300031730 Bacteria 3997
108 Ga0307405_10066755 3300031731 Bacteria 2295
109 Ga0307409_100002667 3300031995 Bacteria 9395
110 Ga0307409_100111025 3300031995 Bacteria 2299
111 Ga0307416_100136166 3300032002 Bacteria 2222
112 Ga0373927_0005572 3300035695 Bacteria 8655
113 Ga0373925_0059115 3300037068 Bacteria 2875
114 Ga0395899_0028875 3300037312 Bacteria 4174
115 Ga0237819_00407 3300038705 Bacteria 14946
116 Ga0237819_01147 3300038705 Bacteria 7604
117 Ga0436365_1179273 3300039437 Bacteria 1525
118 Ga0451853_0189547 3300041512 Bacteria 6328
119 Ga0466969_0047271 3300044656 Bacteria 2131
120 Ga0466972_0008308 3300044658 Bacteria 5204
121 Ga0466961_0010579 3300044693 Bacteria 5886
122 Ga0466970_0024960 3300044765 Bacteria 3128
123 Ga0466959_0022953 3300045049 Bacteria 4613
124 Ga0466958_0071196 3300045836 Bacteria 2129
125 Ga0466967_0000910 3300045976 Bacteria 15867
126 Ga0466967_0043929 3300045976 Bacteria 3872
127 Ga0495603_0060095 3300046455 Bacteria 2246
128 Ga0495580_0008814 3300046472 Bacteria 7985
129 Ga0495594_0000007 3300046499 Bacteria 160047
130 Ga0495606_0004181 3300046507 Bacteria 14633
131 Ga0495628_0025725 3300046516 Bacteria 4806
132 Ga0495628_0028990 3300046516 Bacteria 4493
133 Ga0495632_0057348 3300046519 Bacteria 1901
134 Ga0495645_0055637 3300046543 Bacteria 2873
135 Ga0495622_0000736 3300046557 Bacteria 18486
136 Ga0495668_0000173 3300046616 Bacteria 95830
137 Ga0495625_0001016 3300046660 Bacteria 37004
138 Ga0495589_0050810 3300046794 Bacteria 2050
139 Ga0495674_0203865 3300047319 Bacteria 1640
140 Ga0495672_0013160 3300047320 Bacteria 5722
141 Ga0495676_0011083 3300047321 Bacteria 8146
142 Ga0495626_0000267 3300048091 Bacteria 58992
143 Ga0496100_0000490 3300048903 Bacteria 19068
144 Ga0496101_0009981 3300048904 Bacteria 6256
145 Ga0496102_0026674 3300048905 Bacteria 5156
146 Ga0496102_0036454 3300048905 Bacteria 4431
147 Ga0496103_0045185 3300048906 Bacteria 2717
148 Ga0496103_0076831 3300048906 Bacteria 2096
149 Ga0496103_0116342 3300048906 Bacteria 1701
150 Ga0496104_0005880 3300048907 Bacteria 10741
151 Ga0496105_0015693 3300048908 Bacteria 6043
152 Ga0496106_0003209 3300048909 Bacteria 12245
153 Ga0496106_0111086 3300048909 Bacteria 2134
154 Ga0496107_0000379 3300048910 Bacteria 24154
155 Ga0496108_0018100 3300048911 Bacteria 5764
156 Ga0496109_0003732 3300048912 Bacteria 12726
157 Ga0496110_0002059 3300048913 Bacteria 14989
158 Ga0496110_0020104 3300048913 Bacteria 5632
159 Ga0496110_0027890 3300048913 Bacteria 4845
160 Ga0496111_0003380 3300048914 Bacteria 9863
161 Ga0496111_0034200 3300048914 Bacteria 3628
162 Ga0496112_0048641 3300048915 Bacteria 4157
163 Ga0496112_0051265 3300048915 Bacteria 4047
164 Ga0496113_0112027 3300048916 Bacteria 2125
165 Ga0496115_0181668 3300048918 Bacteria 1739
166 Ga0496116_0018545 3300048919 Bacteria 5359
167 Ga0496116_0066261 3300048919 Bacteria 2312
168 Ga0496119_0004574 3300048922 Bacteria 13672
169 Ga0496122_0019998 3300048925 Bacteria 6084
170 Ga0496125_0118968 3300048928 Bacteria 1890
171 Ga0496126_0022089 3300048929 Bacteria 6198
172 Ga0501032_0045080 3300049569 Bacteria 2983
173 Ga0501033_0003338 3300049570 Bacteria 13252
174 Ga0501033_0017702 3300049570 Bacteria 5381
175 Ga0501033_0047940 3300049570 Bacteria 3175
176 Ga0501034_0001799 3300049571 Bacteria 27362
177 Ga0501034_0025553 3300049571 Bacteria 6013
178 Ga0501036_0002121 3300049572 Bacteria 15482
179 Ga0501036_0026621 3300049572 Bacteria 4884
180 Ga0501036_0090135 3300049572 Bacteria 2590
181 Ga0501037_0020331 3300049573 Bacteria 4901
182 Ga0501038_0015037 3300049574 Bacteria 7050
183 Ga0501038_0022455 3300049574 Bacteria 5654
184 Ga0501038_0028934 3300049574 Bacteria 4916
185 Ga0501039_0078235 3300049575 Bacteria 2572
186 Ga0501043_0126218 3300049579 Bacteria 2006
187 Ga0501046_0007628 3300049580 Bacteria 9491
188 Ga0501047_0152869 3300049581 Bacteria 2182
189 Ga0501048_0053575 3300049582 Bacteria 2868
190 Ga0501070_0016804 3300049586 Bacteria 6142
191 Ga0501072_0070965 3300049588 Bacteria 2751
192 Ga0501074_0002440 3300049590 Bacteria 12974
193 Ga0501075_0066006 3300049591 Bacteria 2730
194 Ga0501076_0068333 3300049592 Bacteria 2838
195 Ga0501221_008130 3300049704 Bacteria 1817
196 Ga0501079_0013840 3300049741 Bacteria 6153
197 Ga0501080_0105138 3300049742 Bacteria 2618
198 Ga0501035_0007127 3300049822 Bacteria 10451
199 Ga0501045_0064095 3300049824 Bacteria 2697
200 nmdc:mga06r32_254963_c1 3300050510 Bacteria 1742
201 Ga0495601_0093546 3300053077 Bacteria 1936
202 Ga0495612_0002190 3300053078 Bacteria 8037
203 Ga0495612_0011754 3300053078 Bacteria 3529
204 Ga0495619_0118744 3300053085 Bacteria 1812
205 Ga0530510_0052132 3300061734 Bacteria 2956
206 2501941596 2501939600 Bacteria 6907073
207 2511178095 2510917027 Bacteria 5287437
208 2511698952 2511231119 Bacteria 4019861
209 2512639495 2512564013 Bacteria 6286191
210 2540606164 2540341094 Bacteria 4061186
211 2545558167 2545555800 Bacteria 4222588
212 2547412312 2547132111 Bacteria 8013147
213 2553396093 2551306519 Bacteria 5465154
214 2555470725 2554235283 Bacteria 3683090
215 2578932589 2576861599 Bacteria 4217202
216 2595088776 2593339131 Bacteria 5116855
217 2595091335 2593339131 Bacteria 5116855
218 2631985592 2630968484 Bacteria 3876276
219 2644707833 2643221729 Bacteria 6621700
220 2644712137 2643221730 Bacteria 6523787
221 2644721070 2643221731 Bacteria 5623886
222 2644722526 2643221732 Bacteria 5756404
223 2644739357 2643221735 Bacteria 3676263
224 2651530131 2648501850 Bacteria 3975476
225 2672334664 2671180330 Bacteria 5521719
226 2672335603 2671180330 Bacteria 5521719
227 2674420259 2671180844 Bacteria 4164150
228 2685149013 2684622632 Bacteria 5380049
229 2686996239 2684623153 Bacteria 3878815
230 2687497490 2687453109 Bacteria 3860091
231 2695626876 2695420354 Bacteria 3922431
232 2698324152 2695420987 Bacteria 6152737
233 2705993060 2703719227 Bacteria 5631989
234 2717917309 2716884898 Bacteria 3928789
235 2721504416 2718218445 Bacteria 5113413
236 2738838160 2738541299 Bacteria 4020721
237 2739156646 2738541358 Bacteria 5932299
238 2739210247 2738543006 Bacteria 5904091
239 2739268907 2738543017 Bacteria 4271950
240 2739269023 2738543017 Bacteria 4271950
241 2739365502 2738543034 Bacteria 6084756
242 2757564529 2757320391 Bacteria 4746095
243 2757566367 2757320391 Bacteria 4746095
244 2757566774 2757320391 Bacteria 4746095
245 2777760653 2775507177 Bacteria 4384303
246 2777760748 2775507177 Bacteria 4384303
247 2777764267 2775507177 Bacteria 4384303
248 2777836133 2775507192 Bacteria 4622234
249 2777837651 2775507192 Bacteria 4622234
250 2777838958 2775507192 Bacteria 4622234
251 2784591976 2784132148 Bacteria 8627943
252 2791215209 2788500588 Bacteria 4584915
253 2808868164 2808606364 Bacteria 4465927
254 2809054365 2808606399 Bacteria 4021018
255 2809235614 2808606448 Bacteria 8656184
256 2812315362 2811994870 Bacteria 3776934
257 2816863520 2816332186 Bacteria 5331395
258 2816865151 2816332186 Bacteria 5331395
259 2817479229 2816332295 Bacteria 4352468
260 2819582833 2818991443 Bacteria 6598732
261 2819628215 2818991451 Bacteria 4697364
262 2819711630 2818991465 Bacteria 5388835
263 2819725208 2818991468 Bacteria 3723169
264 2823527341 2823526263 Bacteria 3765752
265 2842684022 2842682962 Bacteria 5589973
266 2842685578 2842682962 Bacteria 5589973
267 2842887194 2842882022 Bacteria 6158489
268 2849140421 2849139964 Bacteria 5613304
269 2852674669 2852673933 Bacteria 3347676
270 2857471341 2857465823 Bacteria 6772595
271 2857583703 2857581216 Bacteria 5522813
272 2857584820 2857581216 Bacteria 5522813
273 2857587853 2857586860 Bacteria 4354574
274 2857587970 2857586860 Bacteria 4354574
275 2857592484 2857591370 Bacteria 6569758
276 2857612410 2857609550 Bacteria 3753890
277 2860838538 2860837431 Bacteria 4202080
278 2862575322 2862574272 Bacteria 10567477
279 2867302586 2867302475 Bacteria 7087181
280 2867314508 2867312974 Bacteria 7058875
281 2867323334 2867319477 Bacteria 7069771
282 2870790106 2870782633 Bacteria 9624083
283 2877769695 2877768649 Bacteria 3957164
284 2880170693 2880169592 Bacteria 3900066
285 2881649849 2881644220 Bacteria 5302661
286 2887480907 2887478801 Bacteria 8972725
287 2897110676 2897109615 Bacteria 4009619
288 2904529625 2904524088 Bacteria 5887454
289 2904562957 2904560550 Bacteria 4029838
290 2904610421 2904606771 Bacteria 4684500
291 2908666440 2908665501 Bacteria 3678115
292 2912728937 2912723979 Bacteria 8557534
293 2915601751 2915597211 Bacteria 6475886
294 2915607669 2915606848 Bacteria 6032732
295 2919093445 2919093281 Bacteria 3660974
296 2919148863 2919143609 Bacteria 6219228
297 2919415008 2919414237 Bacteria 5429133
298 2919415882 2919414237 Bacteria 5429133
299 2919418112 2919414237 Bacteria 5429133
300 2919499282 2919497567 Bacteria 4408621
301 2919522329 2919517244 Bacteria 5858162
302 2919725498 2919720352 Bacteria 5986006
303 2919729645 2919726948 Bacteria 3696050
304 2928099209 2928093941 Bacteria 5965005
305 2928511348 2928510474 Bacteria 4815308
306 2929009181 2929004312 Bacteria 5678476
307 2929186877 2929183550 Bacteria 6377511
308 2929234283 2929233124 Bacteria 5948380
309 2936342205 2936340661 Bacteria 5139038
310 2936344279 2936340661 Bacteria 5139038
311 2936345125 2936340661 Bacteria 5139038
312 2936364723 2936361878 Bacteria 5632809
313 2938918462 2938917290 Bacteria 5914775
314 2939596091 2939593269 Bacteria 4798695
315 2947427812 2947426588 Bacteria 5357194
316 2954775152 2954773129 Bacteria 3741715
317 2960324696 2960319331 Bacteria 5502575
318 2960378129 2960375949 Bacteria 5361395
319 2962291899 2962290636 Bacteria 4072939
320 2965762324 2965761152 Bacteria 5806513
321 2969137945 2969136845 Bacteria 3923176
322 2969142147 2969141011 Bacteria 4118468
323 2969768271 2969765954 Bacteria 4216713
324 2969771729 2969770375 Bacteria 4271280
325 2971894443 2971893375 Bacteria 3929648
326 2977258779 2977254563 Bacteria 4828420
327 2979084734 2979083700 Bacteria 5894929
328 2980493721 2980492589 Bacteria 4072961
329 2990279683 2990275345 Bacteria 4887158
330 2990279804 2990275345 Bacteria 4887158
331 3001892663 3001892409 Bacteria 6328293
332 3001893868 3001892409 Bacteria 6328293
333 3006494588 3006493962 Bacteria 8825450
334 3006831655 3006826541 Bacteria 4678913
335 3006859553 3006858327 Bacteria 4317835
336 3006880186 3006879489 Bacteria 4064221
337 3006974272 3006973921 Bacteria 4423788
338 3006978754 3006978542 Bacteria 5328100
339 649816046 649633069 Bacteria 6962533
340 8001785419 8001781756 Bacteria 9586736
341 8003861679 8003856774 Bacteria 7675274
342 8008575852 8008574985 Bacteria 7815457
343 8022622238 8022621104 Bacteria 5241040
344 8022633905 8022630665 Bacteria 3886130
345 8022655110 8022653035 Bacteria 4035078
346 8022793476 8022792930 Bacteria 5693794
347 8022894692 8022893055 Bacteria 5300455
348 8022915146 8022914991 Bacteria 5584517
349 8022951321 8022948649 Bacteria 5366783
350 8023443387 8023438354 Bacteria 5779374
351 8023449312 8023444577 Bacteria 5661597
352 8023624161 8023623736 Bacteria 8593882
353 8051953486 8051952484 Bacteria 3926774
354 8052177093 8052174270 Bacteria 3881265
355 8054283984 8054280661 Bacteria 4232245
356 8055536338 8055531788 Bacteria 5249694
357 8056836131 8056829672 Bacteria 9045328
358 8057583817 8057582654 Bacteria 5218944
359 8057633766 8057632132 Bacteria 4726859
360 Ga0209025_1000616
361 JGI25159J45721_1003482
362 JGI25151J46595_10000009
363 JGI25151J46595_10000496
364 JGI25151J46595_10000679
365 JGI25151J46595_10004504
366 JGI25151J46595_10010928
367 JGI25151J46595_10032374
368 rootH1_10025147
369 rootL2_10017596
370 rootH1_10036582
371 Ga0006562J51391_1001382
372 Ga0006562J51391_1003939
373 Ga0055532_1000213
374 Ga0055532_1004159
375 Ga0055536_1007664
376 Ga0055528_1005766
377 Ga0070683_100002531
378 Ga0070668_100002001
379 Ga0070709_10000438
380 Ga0070714_100001365
381 Ga0070714_100137000
382 Ga0070713_100003228
383 Ga0070710_10004834
384 Ga0070711_100001243
385 Ga0070708_100075280
386 Ga0070706_100001984
387 Ga0070706_100004995
388 Ga0070707_100012549
389 Ga0070684_100018668
390 Ga0070684_100108657
391 Ga0070684_100253011
392 Ga0068856_100020263
393 Ga0068864_100098029
394 Ga0081540_1007477
395 Ga0081539_10011148
396 Ga0081539_10039902
397 Ga0070717_10041302
398 Ga0070717_10056837
399 Ga0070715_10010186
400 Ga0070716_100001305
401 Ga0070712_100003336
402 Ga0105251_10012856
403 Ga0105250_10003739
404 Ga0105247_10042903
405 Ga0105243_10002585
406 Ga0105237_10240260
407 Ga0105238_10047067
408 Ga0105239_10171275
409 Ga0105246_10019281
410 Ga0105246_10049295
411 Ga0157371_10003017
412 Ga0157370_10044773
413 Ga0157378_10020113
414 Ga0163162_10002769
415 Ga0163163_10291460
416 Ga0157377_10030457
417 Ga0157376_10152353
418 Ga0209784_100178
419 Ga0209147_100080
420 Ga0209147_103180
421 Ga0209673_1003272
422 Ga0209130_1000311
423 Ga0209130_1005287
424 Ga0209130_1013717
425 Ga0209676_1000844
426 Ga0209676_1001224
427 Ga0209025_1000001
428 Ga0209025_1000130
429 Ga0209025_1000209
430 Ga0209025_1001238
431 Ga0209025_1003540
432 Ga0209025_1004828
433 Ga0209025_1005845
434 Ga0209025_1011611
435 Ga0209025_1017206
436 Ga0207696_1004554
437 Ga0207696_1014879
438 Ga0207655_1005394
439 Ga0207655_1021235
440 Ga0207713_1003689
441 Ga0207692_10000109
442 Ga0207699_10000535
443 Ga0207684_10005514
444 Ga0207684_10008675
445 Ga0207707_10052992
446 Ga0207663_10000794
447 Ga0207663_10080427
448 Ga0207660_10045277
449 Ga0207657_10041595
450 Ga0207649_10028515
451 Ga0207646_10020650
452 Ga0207700_10000610
453 Ga0207664_10000597
454 Ga0207664_10117212
455 Ga0207709_10006359
456 Ga0207665_10002627
457 Ga0207661_10000965
458 Ga0207661_10073566
459 Ga0207668_10003840
460 Ga0207702_10019462
461 Ga0207675_100062821
462 Ga0307517_10027115
463 Ga0307515_10002732
464 Ga0237817_10231
465 Ga0307512_10002240
466 Ga0307516_10052337
467 Ga0307405_10066755
468 Ga0307409_100002667
469 Ga0307409_100111025
470 Ga0307416_100136166
471 Ga0373927_0005572
472 Ga0373925_0059115
473 Ga0395899_0028875
474 Ga0237819_00407
475 Ga0237819_01147
476 Ga0436365_1179273
477 Ga0451853_0189547
478 Ga0466969_0047271
479 Ga0466972_0008308
480 Ga0466961_0010579
481 Ga0466970_0024960
482 Ga0466959_0022953
483 Ga0466958_0071196
484 Ga0466967_0000910
485 Ga0466967_0043929
486 Ga0495603_0060095
487 Ga0495580_0008814
488 Ga0495594_0000007
489 Ga0495606_0004181
490 Ga0495628_0025725
491 Ga0495628_0028990
492 Ga0495632_0057348
493 Ga0495645_0055637
494 Ga0495622_0000736
495 Ga0495668_0000173
496 Ga0495625_0001016
497 Ga0495589_0050810
498 Ga0495674_0203865
499 Ga0495672_0013160
500 Ga0495676_0011083
501 Ga0495626_0000267
502 Ga0496100_0000490
503 Ga0496101_0009981
504 Ga0496102_0026674
505 Ga0496102_0036454
506 Ga0496103_0045185
507 Ga0496103_0076831
508 Ga0496103_0116342
509 Ga0496104_0005880
510 Ga0496105_0015693
511 Ga0496106_0003209
512 Ga0496106_0111086
513 Ga0496107_0000379
514 Ga0496108_0018100
515 Ga0496109_0003732
516 Ga0496110_0002059
517 Ga0496110_0020104
518 Ga0496110_0027890
519 Ga0496111_0003380
520 Ga0496111_0034200
521 Ga0496112_0048641
522 Ga0496112_0051265
523 Ga0496113_0112027
524 Ga0496115_0181668
525 Ga0496116_0018545
526 Ga0496116_0066261
527 Ga0496119_0004574
528 Ga0496122_0019998
529 Ga0496125_0118968
530 Ga0496126_0022089
531 Ga0501032_0045080
532 Ga0501033_0003338
533 Ga0501033_0017702
534 Ga0501033_0047940
535 Ga0501034_0001799
536 Ga0501034_0025553
537 Ga0501036_0002121
538 Ga0501036_0026621
539 Ga0501036_0090135
540 Ga0501037_0020331
541 Ga0501038_0015037
542 Ga0501038_0022455
543 Ga0501038_0028934
544 Ga0501039_0078235
545 Ga0501043_0126218
546 Ga0501046_0007628
547 Ga0501047_0152869
548 Ga0501048_0053575
549 Ga0501070_0016804
550 Ga0501072_0070965
551 Ga0501074_0002440
552 Ga0501075_0066006
553 Ga0501076_0068333
554 Ga0501221_008130
555 Ga0501079_0013840
556 Ga0501080_0105138
557 Ga0501035_0007127
558 Ga0501045_0064095
559 nmdc:mga06r32_254963_c1
560 Ga0495601_0093546
561 Ga0495612_0002190
562 Ga0495612_0011754
563 Ga0495619_0118744
564 Ga0530510_0052132
565 2501941596
566 2511178095
567 2511698952
568 2512639495
569 2540606164
570 2545558167
571 2547412312
572 2553396093
573 2555470725
574 2578932589
575 2595088776
576 2595091335
577 2631985592
578 2644707833
579 2644712137
580 2644721070
581 2644722526
582 2644739357
583 2651530131
584 2672334664
585 2672335603
586 2674420259
587 2685149013
588 2686996239
589 2687497490
590 2695626876
591 2698324152
592 2705993060
593 2717917309
594 2721504416
595 2738838160
596 2739156646
597 2739210247
598 2739268907
599 2739269023
600 2739365502
601 2757564529
602 2757566367
603 2757566774
604 2777760653
605 2777760748
606 2777764267
607 2777836133
608 2777837651
609 2777838958
610 2784591976
611 2791215209
612 2808868164
613 2809054365
614 2809235614
615 2812315362
616 2816863520
617 2816865151
618 2817479229
619 2819582833
620 2819628215
621 2819711630
622 2819725208
623 2823527341
624 2842684022
625 2842685578
626 2842887194
627 2849140421
628 2852674669
629 2857471341
630 2857583703
631 2857584820
632 2857587853
633 2857587970
634 2857592484
635 2857612410
636 2860838538
637 2862575322
638 2867302586
639 2867314508
640 2867323334
641 2870790106
642 2877769695
643 2880170693
644 2881649849
645 2887480907
646 2897110676
647 2904529625
648 2904562957
649 2904610421
650 2908666440
651 2912728937
652 2915601751
653 2915607669
654 2919093445
655 2919148863
656 2919415008
657 2919415882
658 2919418112
659 2919499282
660 2919522329
661 2919725498
662 2919729645
663 2928099209
664 2928511348
665 2929009181
666 2929186877
667 2929234283
668 2936342205
669 2936344279
670 2936345125
671 2936364723
672 2938918462
673 2939596091
674 2947427812
675 2954775152
676 2960324696
677 2960378129
678 2962291899
679 2965762324
680 2969137945
681 2969142147
682 2969768271
683 2969771729
684 2971894443
685 2977258779
686 2979084734
687 2980493721
688 2990279683
689 2990279804
690 3001892663
691 3001893868
692 3006494588
693 3006831655
694 3006859553
695 3006880186
696 3006974272
697 3006978754
698 649816046
699 8001785419
700 8003861679
701 8008575852
702 8022622238
703 8022633905
704 8022655110
705 8022793476
706 8022894692
707 8022915146
708 8022951321
709 8023443387
710 8023449312
711 8023624161
712 8051953486
713 8052177093
714 8054283984
715 8055536338
716 8056836131
717 8057583817
718 8057633766

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

471

545

0.96

PF00501

AMP-binding

AMP-binding enzyme

54

421

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fut-assembly1.cif.gz_A crystal structure of atp bound matb from rhodopseudomonas palustris 0.9504 2 506
4gxr-assembly1.cif.gz_A structure of atp bound rpmatb-bxbclm chimera b3 0.949 2 509
4gxq-assembly3.cif.gz_C crystal structure of atp bound rpmatb-bxbclm chimera b1 0.9442 2 509
4wv3-assembly2.cif.gz_B crystal structure of the anthranilate coa ligase auaeii in complex with anthranoyl-amp 0.9399 1 510
1ry2-assembly1.cif.gz_A crystal structure of yeast acetyl-coenzyme a synthetase in complex with amp 0.9376 1 505
ID Description Score Start End Superfamily
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9802 411 503 3.30.300.30
af_Q9SS00_444_572_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9783 410 507 3.30.300.30
af_O18693_496_601_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9703 410 507 3.30.300.30
af_Q9LQS1_441_544_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9684 410 507 3.30.300.30
af_Q2G2V3_396_492_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9679 410 504 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A7K0MYV2-F1-model_v4 Fatty acid--CoA ligase family protein 0.9801 410 506 GO:0006631
GO:0031956
AF-A0A520ETI9-F1-model_v4 AMP-dependent synthetase 0.9711 308 505 GO:0005524
GO:0006631
GO:0031956
AF-A0A3D5MRC7-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9663 407 509 GO:0016405
AF-A0A350RFD6-F1-model_v4 Fatty acid--CoA ligase 0.9607 359 509 GO:0006631
GO:0031956
AF-A0A1F9AC18-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9603 1 506 GO:0005524
GO:0006631
GO:0031956

Map