F420871

General Info

Members Datasets Scaffolds Average Seq Length
357 165 714 197

Family's Representative Sequence

Representative Sequence 3300026118|Ga0207675_100324461|Ga0207675_1003244611
Length 215
Sequence MGGKDTRWRIVEAAMELFWLKGYASTSIADILSRSQVNSGSLYYFFPGKQDVLLAVLEAYRDGIGAMLLEPAWSGVEDPVEKVFALLAQYRRAIVDTECQYGCPIGSLALELHEPDPPVRERMAANFDAWTAAVRGCIQAARSRLPADVDADALAVFVLTTMEGGVMLARTYRNVAPFDAAVAQLRRHFDHLLRPEAKPIRRKRGVKTTPRRRNA

Samples

Sample ID Description Type Environment
1 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
29 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
56 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
127 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
128 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
129 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
130 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
131 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
132 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
133 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
134 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
135 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
136 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
137 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
138 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
139 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
140 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
141 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
142 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
143 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
144 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
145 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
146 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
147 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
148 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
149 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
150 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
151 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
152 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
153 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
154 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
155 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
156 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300049685 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_B_3_control Metagenome Rhizosphere
165 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.44
Metatranscriptomes 0.56
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.28
Nodule 0
Rhizoplane 3.08
Rhizosphere 96.08
Stem 0
Stem Tuber 0
Unclassified 7.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207675_100324461 3300026118 Bacteria 1504
2 rootL2_10091951 3300003322 Bacteria 2612
3 Ga0065712_10086653 3300005290 Bacteria 2623
4 Ga0065715_10105974 3300005293 Bacteria 2859
5 Ga0065715_10325608 3300005293 Bacteria 993
6 Ga0070658_10018945 3300005327 Bacteria 5514
7 Ga0070658_10417109 3300005327 Bacteria 1154
8 Ga0070676_10012774 3300005328 Bacteria 4594
9 Ga0070676_10271778 3300005328 Bacteria 1139
10 Ga0070683_100664578 3300005329 Bacteria 998
11 Ga0070690_100040578 3300005330 Bacteria 2944
12 Ga0070690_100151899 3300005330 Unclassified 1581
13 Ga0070670_100002840 3300005331 Bacteria 14323
14 Ga0070670_100205754 3300005331 Bacteria 1711
15 Ga0070670_100272730 3300005331 Bacteria 1476
16 Ga0070670_100523041 3300005331 Bacteria 1056
17 Ga0070677_10001139 3300005333 Bacteria 8562
18 Ga0070666_10000445 3300005335 Bacteria 25271
19 Ga0070666_10051629 3300005335 Bacteria 2769
20 Ga0070666_10215584 3300005335 Bacteria 1353
21 Ga0070666_10404851 3300005335 Bacteria 981
22 Ga0070682_100191569 3300005337 Bacteria 1436
23 Ga0068868_100007082 3300005338 Bacteria 7971
24 Ga0068868_100010852 3300005338 Bacteria 6609
25 Ga0068868_100450000 3300005338 Bacteria 1120
26 Ga0070660_100241583 3300005339 Bacteria 1471
27 Ga0070660_100567344 3300005339 Bacteria 947
28 Ga0070689_100079584 3300005340 Bacteria 2571
29 Ga0070687_100018699 3300005343 Unclassified 3210
30 Ga0070661_100113896 3300005344 Bacteria 2021
31 Ga0070661_100200274 3300005344 Bacteria 1525
32 Ga0070661_100715383 3300005344 Unclassified 817
33 Ga0070692_10024835 3300005345 Bacteria 2950
34 Ga0070668_100023366 3300005347 Bacteria 4676
35 Ga0070668_100300014 3300005347 Bacteria 1347
36 Ga0070668_100531957 3300005347 Bacteria 1021
37 Ga0070669_100057273 3300005353 Bacteria 2859
38 Ga0070669_100142680 3300005353 Bacteria 1848
39 Ga0070669_100188716 3300005353 Bacteria 1616
40 Ga0070669_100775568 3300005353 Bacteria 813
41 Ga0070675_100002927 3300005354 Bacteria 12874
42 Ga0070675_100010081 3300005354 Bacteria 7367
43 Ga0070675_100025583 3300005354 Bacteria 4732
44 Ga0070671_100000401 3300005355 Bacteria 29891
45 Ga0070671_100003283 3300005355 Bacteria 12621
46 Ga0070671_100068797 3300005355 Bacteria 2953
47 Ga0070671_100092830 3300005355 Bacteria 2529
48 Ga0070674_100089817 3300005356 Bacteria 2214
49 Ga0070674_100095492 3300005356 Bacteria 2155
50 Ga0070674_100096461 3300005356 Bacteria 2146
51 Ga0070673_100198117 3300005364 Bacteria 1728
52 Ga0070673_100347301 3300005364 Bacteria 1316
53 Ga0070673_100877165 3300005364 Bacteria 831
54 Ga0070688_100004507 3300005365 Bacteria 7262
55 Ga0070659_100038543 3300005366 Bacteria 3728
56 Ga0070659_100145193 3300005366 Unclassified 1933
57 Ga0070659_100201509 3300005366 Bacteria 1638
58 Ga0070659_100284891 3300005366 Bacteria 1375
59 Ga0070659_100306706 3300005366 Bacteria 1325
60 Ga0070667_100003053 3300005367 Bacteria 14391
61 Ga0070667_100013020 3300005367 Bacteria 6877
62 Ga0070667_100016412 3300005367 Bacteria 6128
63 Ga0070667_100286740 3300005367 Unclassified 1480
64 Ga0070667_100360827 3300005367 Bacteria 1317
65 Ga0070667_100857177 3300005367 Bacteria 845
66 Ga0070667_100939093 3300005367 Unclassified 806
67 Ga0070709_10031941 3300005434 Bacteria 3172
68 Ga0070714_100020330 3300005435 Bacteria 5420
69 Ga0070714_100053489 3300005435 Bacteria 3447
70 Ga0070663_100067572 3300005455 Bacteria 2593
71 Ga0070663_100475218 3300005455 Bacteria 1034
72 Ga0070663_100481458 3300005455 Bacteria 1027
73 Ga0070678_100193963 3300005456 Bacteria 1672
74 Ga0070678_100380556 3300005456 Bacteria 1221
75 Ga0070678_100388422 3300005456 Bacteria 1209
76 Ga0070662_100053847 3300005457 Bacteria 2914
77 Ga0070662_100059338 3300005457 Bacteria 2787
78 Ga0070662_100075505 3300005457 Bacteria 2496
79 Ga0068867_100158395 3300005459 Bacteria 1784
80 Ga0070685_10283477 3300005466 Bacteria 1110
81 Ga0070679_100470261 3300005530 Bacteria 1201
82 Ga0068853_100024140 3300005539 Bacteria 5096
83 Ga0070672_100002889 3300005543 Bacteria 11045
84 Ga0070672_100070650 3300005543 Bacteria 2775
85 Ga0070672_100612883 3300005543 Bacteria 949
86 Ga0070686_100013738 3300005544 Bacteria 4645
87 Ga0070686_100202815 3300005544 Bacteria 1423
88 Ga0070686_101042755 3300005544 Unclassified 673
89 Ga0070693_100124756 3300005547 Bacteria 1602
90 Ga0070665_100011774 3300005548 Bacteria 8835
91 Ga0070665_100301197 3300005548 Bacteria 1606
92 Ga0070665_100352749 3300005548 Bacteria 1477
93 Ga0068855_100331594 3300005563 Bacteria 1679
94 Ga0068855_100551063 3300005563 Bacteria 1248
95 Ga0070664_100001794 3300005564 Bacteria 17208
96 Ga0070664_100014907 3300005564 Bacteria 6342
97 Ga0070664_100028308 3300005564 Bacteria 4660
98 Ga0070664_100203246 3300005564 Bacteria 1768
99 Ga0068857_100261600 3300005577 Bacteria 1588
100 Ga0068857_100520515 3300005577 Bacteria 1118
101 Ga0068854_100384702 3300005578 Bacteria 1157
102 Ga0068854_100881031 3300005578 Bacteria 785
103 Ga0068856_100138460 3300005614 Bacteria 2440
104 Ga0068856_100163219 3300005614 Bacteria 2239
105 Ga0068852_100080245 3300005616 Bacteria 2892
106 Ga0068852_100244154 3300005616 Bacteria 1717
107 Ga0068859_100514914 3300005617 Unclassified 1291
108 Ga0068864_100027880 3300005618 Bacteria 4773
109 Ga0068864_100250811 3300005618 Bacteria 1643
110 Ga0068864_100510587 3300005618 Bacteria 1157
111 Ga0068864_101696349 3300005618 Unclassified 636
112 Ga0068861_100150153 3300005719 Bacteria 1911
113 Ga0068851_10063848 3300005834 Bacteria 1891
114 Ga0068851_10402421 3300005834 Bacteria 806
115 Ga0068870_10016451 3300005840 Bacteria 3534
116 Ga0068858_100000868 3300005842 Bacteria 31246
117 Ga0068860_100108878 3300005843 Bacteria 2648
118 Ga0068860_100282717 3300005843 Bacteria 1622
119 Ga0068860_101009819 3300005843 Bacteria 850
120 Ga0068862_100773499 3300005844 Bacteria 936
121 Ga0081539_10022982 3300005985 Bacteria 4100
122 Ga0070712_100049495 3300006175 Bacteria 2919
123 Ga0068871_100381627 3300006358 Bacteria 1252
124 Ga0068865_100513249 3300006881 Bacteria 1001
125 Ga0097620_100514931 3300006931 Unclassified 1291
126 Ga0105245_10009345 3300009098 Bacteria 8552
127 Ga0105247_10407054 3300009101 Bacteria 971
128 Ga0105243_10391350 3300009148 Bacteria 1288
129 Ga0105242_10126381 3300009176 Bacteria 2201
130 Ga0105248_10001078 3300009177 Bacteria 30151
131 Ga0105248_10008051 3300009177 Bacteria 11570
132 Ga0105248_10040174 3300009177 Bacteria 5245
133 Ga0105248_10048882 3300009177 Bacteria 4744
134 Ga0105248_10062840 3300009177 Bacteria 4168
135 Ga0105248_10309542 3300009177 Bacteria 1779
136 Ga0105248_10370934 3300009177 Bacteria 1611
137 Ga0105249_10096371 3300009553 Unclassified 2775
138 Ga0105249_11665350 3300009553 Bacteria 710
139 Ga0105246_10451982 3300011119 Unclassified 1080
140 Ga0157373_10060323 3300013100 Bacteria 2688
141 Ga0157373_10410673 3300013100 Bacteria 971
142 Ga0157373_10414254 3300013100 Bacteria 967
143 Ga0157373_10462427 3300013100 Bacteria 914
144 Ga0157369_10877476 3300013105 Bacteria 920
145 Ga0157374_10141811 3300013296 Bacteria 2333
146 Ga0157374_10687971 3300013296 Bacteria 1035
147 Ga0163162_10034487 3300013306 Bacteria 5036
148 Ga0163162_10418496 3300013306 Bacteria 1472
149 Ga0157375_10014331 3300013308 Bacteria 7069
150 Ga0157375_10016986 3300013308 Bacteria 6557
151 Ga0157375_10350433 3300013308 Bacteria 1642
152 Ga0157375_10443160 3300013308 Bacteria 1464
153 Ga0157380_10060140 3300014326 Bacteria 3035
154 Ga0157380_10103135 3300014326 Bacteria 2380
155 Ga0157379_10390994 3300014968 Bacteria 1277
156 Ga0157379_10803660 3300014968 Unclassified 888
157 Ga0163161_10218045 3300017792 Bacteria 1477
158 Ga0207656_10065441 3300025321 Bacteria 1605
159 Ga0207682_10001425 3300025893 Bacteria 11046
160 Ga0207682_10097808 3300025893 Bacteria 1280
161 Ga0207688_10066290 3300025901 Bacteria 2042
162 Ga0207688_10209321 3300025901 Bacteria 1171
163 Ga0207688_10352147 3300025901 Bacteria 907
164 Ga0207680_10014931 3300025903 Bacteria 4038
165 Ga0207680_10095489 3300025903 Bacteria 1900
166 Ga0207647_10012502 3300025904 Bacteria 5907
167 Ga0207699_10074826 3300025906 Bacteria 2082
168 Ga0207645_10010396 3300025907 Bacteria 6389
169 Ga0207645_10045212 3300025907 Bacteria 2814
170 Ga0207645_10067572 3300025907 Unclassified 2285
171 Ga0207643_10028193 3300025908 Bacteria 3117
172 Ga0207705_10010603 3300025909 Bacteria 6697
173 Ga0207705_10014840 3300025909 Bacteria 5602
174 Ga0207705_10287185 3300025909 Bacteria 1260
175 Ga0207707_10768684 3300025912 Bacteria 804
176 Ga0207693_10034801 3300025915 Bacteria 3972
177 Ga0207662_10007606 3300025918 Bacteria 5904
178 Ga0207657_10067278 3300025919 Bacteria 3047
179 Ga0207657_10082003 3300025919 Bacteria 2707
180 Ga0207657_10190179 3300025919 Bacteria 1656
181 Ga0207649_10048404 3300025920 Bacteria 2622
182 Ga0207649_10153194 3300025920 Bacteria 1590
183 Ga0207649_10200106 3300025920 Bacteria 1410
184 Ga0207652_10157591 3300025921 Bacteria 2034
185 Ga0207681_10058475 3300025923 Bacteria 2640
186 Ga0207681_10076405 3300025923 Bacteria 2352
187 Ga0207681_10153696 3300025923 Bacteria 1727
188 Ga0207681_10172247 3300025923 Bacteria 1641
189 Ga0207650_10004232 3300025925 Bacteria 9798
190 Ga0207650_10018589 3300025925 Bacteria 4878
191 Ga0207650_10231672 3300025925 Bacteria 1490
192 Ga0207659_10071625 3300025926 Bacteria 2531
193 Ga0207659_10170700 3300025926 Bacteria 1716
194 Ga0207659_10272026 3300025926 Unclassified 1382
195 Ga0207687_10006475 3300025927 Bacteria 7735
196 Ga0207700_10037100 3300025928 Bacteria 3526
197 Ga0207664_10018753 3300025929 Bacteria 5103
198 Ga0207664_10072381 3300025929 Bacteria 2778
199 Ga0207644_10014537 3300025931 Bacteria 5267
200 Ga0207644_10033449 3300025931 Bacteria 3592
201 Ga0207644_10037186 3300025931 Bacteria 3423
202 Ga0207644_10166813 3300025931 Bacteria 1716
203 Ga0207690_10073261 3300025932 Bacteria 2368
204 Ga0207690_10103201 3300025932 Bacteria 2041
205 Ga0207690_10694408 3300025932 Bacteria 836
206 Ga0207706_10024799 3300025933 Bacteria 5375
207 Ga0207706_10066822 3300025933 Bacteria 3164
208 Ga0207706_10083040 3300025933 Bacteria 2816
209 Ga0207706_10111675 3300025933 Bacteria 2405
210 Ga0207709_10103813 3300025935 Bacteria 1885
211 Ga0207709_10365865 3300025935 Unclassified 1093
212 Ga0207670_10145585 3300025936 Unclassified 1752
213 Ga0207669_10075845 3300025937 Bacteria 2132
214 Ga0207669_10102872 3300025937 Bacteria 1893
215 Ga0207669_10236854 3300025937 Bacteria 1350
216 Ga0207704_10569968 3300025938 Bacteria 923
217 Ga0207691_10006271 3300025940 Bacteria 11481
218 Ga0207691_10044474 3300025940 Bacteria 4088
219 Ga0207691_10266000 3300025940 Bacteria 1477
220 Ga0207711_10000510 3300025941 Bacteria 39938
221 Ga0207711_10005888 3300025941 Bacteria 10351
222 Ga0207711_10013710 3300025941 Bacteria 6731
223 Ga0207711_10071262 3300025941 Bacteria 3015
224 Ga0207711_10609158 3300025941 Bacteria 1019
225 Ga0207661_10652995 3300025944 Bacteria 967
226 Ga0207679_10027841 3300025945 Bacteria 3914
227 Ga0207679_10054437 3300025945 Unclassified 2946
228 Ga0207679_10150558 3300025945 Bacteria 1893
229 Ga0207679_10209059 3300025945 Bacteria 1635
230 Ga0207667_10188098 3300025949 Bacteria 2119
231 Ga0207667_10476337 3300025949 Bacteria 1267
232 Ga0207651_10219347 3300025960 Bacteria 1536
233 Ga0207651_10379043 3300025960 Bacteria 1198
234 Ga0207651_10539628 3300025960 Bacteria 1013
235 Ga0207712_10076389 3300025961 Unclassified 2425
236 Ga0207668_10881147 3300025972 Bacteria 796
237 Ga0207640_10238017 3300025981 Bacteria 1405
238 Ga0207640_10444791 3300025981 Bacteria 1066
239 Ga0207658_10006731 3300025986 Bacteria 7823
240 Ga0207658_10008217 3300025986 Bacteria 7112
241 Ga0207658_10049772 3300025986 Bacteria 3080
242 Ga0207658_10213886 3300025986 Bacteria 1617
243 Ga0207658_10576092 3300025986 Bacteria 1009
244 Ga0207677_10001503 3300026023 Bacteria 12317
245 Ga0207677_10007053 3300026023 Bacteria 6181
246 Ga0207703_10000896 3300026035 Bacteria 29159
247 Ga0207703_10435435 3300026035 Bacteria 1222
248 Ga0207639_10046814 3300026041 Bacteria 3265
249 Ga0207639_10800538 3300026041 Bacteria 878
250 Ga0207678_10006779 3300026067 Bacteria 10152
251 Ga0207678_10022618 3300026067 Bacteria 5505
252 Ga0207702_10112703 3300026078 Bacteria 2421
253 Ga0207702_10341213 3300026078 Bacteria 1431
254 Ga0207676_10203031 3300026095 Unclassified 1753
255 Ga0207676_10468909 3300026095 Bacteria 1190
256 Ga0207675_100164068 3300026118 Bacteria 2121
257 Ga0207683_10165408 3300026121 Bacteria 2001
258 Ga0207683_10475685 3300026121 Bacteria 1153
259 Ga0207683_10791532 3300026121 Bacteria 880
260 Ga0207698_10009614 3300026142 Bacteria 6174
261 Ga0207698_10150314 3300026142 Unclassified 2020
262 Ga0207698_10939908 3300026142 Bacteria 873
263 Ga0268266_10047932 3300028379 Bacteria 3662
264 Ga0268266_10309831 3300028379 Bacteria 1475
265 Ga0268265_10072933 3300028380 Unclassified 2679
266 Ga0268265_10156587 3300028380 Bacteria 1929
267 Ga0268265_10239066 3300028380 Bacteria 1601
268 Ga0268264_10046268 3300028381 Bacteria 3614
269 Ga0268264_10235826 3300028381 Bacteria 1692
270 Ga0265770_1000056 3300030878 Bacteria 12019
271 Ga0265760_10000261 3300031090 Bacteria 14402
272 Ga0307408_100238856 3300031548 Bacteria 1492
273 Ga0307408_100712062 3300031548 Bacteria 903
274 Ga0307405_10014907 3300031731 Bacteria 4195
275 Ga0307405_11096656 3300031731 Bacteria 684
276 Ga0307413_10000649 3300031824 Bacteria 11764
277 Ga0307413_10019214 3300031824 Bacteria 3605
278 Ga0307413_10217809 3300031824 Bacteria 1392
279 Ga0307413_10724739 3300031824 Bacteria 828
280 Ga0307410_10015780 3300031852 Bacteria 4488
281 Ga0307410_10017146 3300031852 Bacteria 4339
282 Ga0307410_10043565 3300031852 Bacteria 2975
283 Ga0307410_10161014 3300031852 Bacteria 1681
284 Ga0307410_10196207 3300031852 Bacteria 1538
285 Ga0307406_10349883 3300031901 Bacteria 1154
286 Ga0307406_10813739 3300031901 Bacteria 789
287 Ga0307407_10008840 3300031903 Bacteria 4652
288 Ga0307407_10025403 3300031903 Bacteria 3121
289 Ga0307407_10079838 3300031903 Bacteria 1975
290 Ga0307412_10120728 3300031911 Bacteria 1886
291 Ga0307412_10157543 3300031911 Bacteria 1683
292 Ga0307412_10294440 3300031911 Unclassified 1280
293 Ga0307412_10882734 3300031911 Bacteria 782
294 Ga0307409_100000240 3300031995 Bacteria 22082
295 Ga0307409_100000590 3300031995 Bacteria 15843
296 Ga0307409_100001643 3300031995 Bacteria 11203
297 Ga0307409_100038641 3300031995 Bacteria 3532
298 Ga0307409_100064907 3300031995 Unclassified 2870
299 Ga0307409_100122626 3300031995 Bacteria 2204
300 Ga0307409_100760701 3300031995 Bacteria 973
301 Ga0307416_100024214 3300032002 Bacteria 4426
302 Ga0307416_100088012 3300032002 Bacteria 2654
303 Ga0307416_100142624 3300032002 Bacteria 2180
304 Ga0307416_100212196 3300032002 Bacteria 1848
305 Ga0307416_100286836 3300032002 Bacteria 1627
306 Ga0307416_101020714 3300032002 Bacteria 931
307 Ga0307416_101086296 3300032002 Bacteria 904
308 Ga0307414_10000921 3300032004 Bacteria 15040
309 Ga0307414_10010676 3300032004 Bacteria 5345
310 Ga0307414_10066851 3300032004 Bacteria 2571
311 Ga0307411_10005274 3300032005 Bacteria 6328
312 Ga0307411_10308386 3300032005 Bacteria 1272
313 Ga0307411_10454957 3300032005 Bacteria 1072
314 Ga0307411_10496710 3300032005 Bacteria 1030
315 Ga0307415_100001963 3300032126 Bacteria 10125
316 Ga0307415_100059394 3300032126 Bacteria 2637
317 Ga0307415_100077269 3300032126 Bacteria 2363
318 Ga0373935_0028440 3300035692 Bacteria 3456
319 Ga0395899_0025757 3300037312 Bacteria 4440
320 Ga0395900_0039205 3300037418 Bacteria 4881
321 Ga0395900_0256710 3300037418 Bacteria 1747
322 Ga0395898_0240921 3300037466 Bacteria 1725
323 Ga0395905_0000956 3300037471 Bacteria 37067
324 Ga0395905_0018446 3300037471 Bacteria 6623
325 Ga0395905_0050332 3300037471 Bacteria 3903
326 Ga0395905_0234849 3300037471 Bacteria 1714
327 Ga0436364_0103913 3300037853 Bacteria 7699
328 Ga0395901_0095231 3300038443 Bacteria 3120
329 Ga0395901_0625554 3300038443 Bacteria 1083
330 Ga0451793_1287428 3300041452 Bacteria 647
331 Ga0439445_0128439 3300042004 Unclassified 731
332 Ga0466957_0074199 3300044842 Unclassified 2109
333 Ga0466967_0040142 3300045976 Bacteria 4028
334 Ga0466967_0142378 3300045976 Unclassified 2234
335 Ga0495585_0064753 3300046492 Bacteria 2004
336 Ga0495663_0001367 3300046525 Bacteria 7685
337 Ga0495598_0013213 3300046537 Bacteria 2042
338 Ga0495621_0028172 3300046539 Bacteria 1908
339 Ga0495668_0014787 3300046616 Bacteria 4569
340 Ga0495669_0011493 3300046684 Bacteria 3759
341 Ga0495669_0013437 3300046684 Bacteria 3488
342 Ga0495669_0071437 3300046684 Bacteria 1583
343 Ga0495669_0139743 3300046684 Bacteria 1143
344 Ga0495677_0034158 3300047445 Bacteria 1855
345 Ga0495685_038798 3300047447 Bacteria 1631
346 Ga0496102_0517755 3300048905 Bacteria 1115
347 Ga0496106_0554282 3300048909 Bacteria 922
348 Ga0496107_0158493 3300048910 Bacteria 1676
349 Ga0496109_0229807 3300048912 Bacteria 1745
350 Ga0496110_0000561 3300048913 Bacteria 25363
351 Ga0496110_0299809 3300048913 Bacteria 1464
352 Ga0496111_0093994 3300048914 Bacteria 2199
353 Ga0496111_0100449 3300048914 Bacteria 2125
354 Ga0496111_0158115 3300048914 Bacteria 1682
355 Ga0496112_0541116 3300048915 Bacteria 1099
356 Ga0501256_007441 3300049685 Unclassified 1005
357 Ga0500658_0000023 3300053134 Bacteria 123176
358 Ga0207675_100324461
359 rootL2_10091951
360 Ga0065712_10086653
361 Ga0065715_10105974
362 Ga0065715_10325608
363 Ga0070658_10018945
364 Ga0070658_10417109
365 Ga0070676_10012774
366 Ga0070676_10271778
367 Ga0070683_100664578
368 Ga0070690_100040578
369 Ga0070690_100151899
370 Ga0070670_100002840
371 Ga0070670_100205754
372 Ga0070670_100272730
373 Ga0070670_100523041
374 Ga0070677_10001139
375 Ga0070666_10000445
376 Ga0070666_10051629
377 Ga0070666_10215584
378 Ga0070666_10404851
379 Ga0070682_100191569
380 Ga0068868_100007082
381 Ga0068868_100010852
382 Ga0068868_100450000
383 Ga0070660_100241583
384 Ga0070660_100567344
385 Ga0070689_100079584
386 Ga0070687_100018699
387 Ga0070661_100113896
388 Ga0070661_100200274
389 Ga0070661_100715383
390 Ga0070692_10024835
391 Ga0070668_100023366
392 Ga0070668_100300014
393 Ga0070668_100531957
394 Ga0070669_100057273
395 Ga0070669_100142680
396 Ga0070669_100188716
397 Ga0070669_100775568
398 Ga0070675_100002927
399 Ga0070675_100010081
400 Ga0070675_100025583
401 Ga0070671_100000401
402 Ga0070671_100003283
403 Ga0070671_100068797
404 Ga0070671_100092830
405 Ga0070674_100089817
406 Ga0070674_100095492
407 Ga0070674_100096461
408 Ga0070673_100198117
409 Ga0070673_100347301
410 Ga0070673_100877165
411 Ga0070688_100004507
412 Ga0070659_100038543
413 Ga0070659_100145193
414 Ga0070659_100201509
415 Ga0070659_100284891
416 Ga0070659_100306706
417 Ga0070667_100003053
418 Ga0070667_100013020
419 Ga0070667_100016412
420 Ga0070667_100286740
421 Ga0070667_100360827
422 Ga0070667_100857177
423 Ga0070667_100939093
424 Ga0070709_10031941
425 Ga0070714_100020330
426 Ga0070714_100053489
427 Ga0070663_100067572
428 Ga0070663_100475218
429 Ga0070663_100481458
430 Ga0070678_100193963
431 Ga0070678_100380556
432 Ga0070678_100388422
433 Ga0070662_100053847
434 Ga0070662_100059338
435 Ga0070662_100075505
436 Ga0068867_100158395
437 Ga0070685_10283477
438 Ga0070679_100470261
439 Ga0068853_100024140
440 Ga0070672_100002889
441 Ga0070672_100070650
442 Ga0070672_100612883
443 Ga0070686_100013738
444 Ga0070686_100202815
445 Ga0070686_101042755
446 Ga0070693_100124756
447 Ga0070665_100011774
448 Ga0070665_100301197
449 Ga0070665_100352749
450 Ga0068855_100331594
451 Ga0068855_100551063
452 Ga0070664_100001794
453 Ga0070664_100014907
454 Ga0070664_100028308
455 Ga0070664_100203246
456 Ga0068857_100261600
457 Ga0068857_100520515
458 Ga0068854_100384702
459 Ga0068854_100881031
460 Ga0068856_100138460
461 Ga0068856_100163219
462 Ga0068852_100080245
463 Ga0068852_100244154
464 Ga0068859_100514914
465 Ga0068864_100027880
466 Ga0068864_100250811
467 Ga0068864_100510587
468 Ga0068864_101696349
469 Ga0068861_100150153
470 Ga0068851_10063848
471 Ga0068851_10402421
472 Ga0068870_10016451
473 Ga0068858_100000868
474 Ga0068860_100108878
475 Ga0068860_100282717
476 Ga0068860_101009819
477 Ga0068862_100773499
478 Ga0081539_10022982
479 Ga0070712_100049495
480 Ga0068871_100381627
481 Ga0068865_100513249
482 Ga0097620_100514931
483 Ga0105245_10009345
484 Ga0105247_10407054
485 Ga0105243_10391350
486 Ga0105242_10126381
487 Ga0105248_10001078
488 Ga0105248_10008051
489 Ga0105248_10040174
490 Ga0105248_10048882
491 Ga0105248_10062840
492 Ga0105248_10309542
493 Ga0105248_10370934
494 Ga0105249_10096371
495 Ga0105249_11665350
496 Ga0105246_10451982
497 Ga0157373_10060323
498 Ga0157373_10410673
499 Ga0157373_10414254
500 Ga0157373_10462427
501 Ga0157369_10877476
502 Ga0157374_10141811
503 Ga0157374_10687971
504 Ga0163162_10034487
505 Ga0163162_10418496
506 Ga0157375_10014331
507 Ga0157375_10016986
508 Ga0157375_10350433
509 Ga0157375_10443160
510 Ga0157380_10060140
511 Ga0157380_10103135
512 Ga0157379_10390994
513 Ga0157379_10803660
514 Ga0163161_10218045
515 Ga0207656_10065441
516 Ga0207682_10001425
517 Ga0207682_10097808
518 Ga0207688_10066290
519 Ga0207688_10209321
520 Ga0207688_10352147
521 Ga0207680_10014931
522 Ga0207680_10095489
523 Ga0207647_10012502
524 Ga0207699_10074826
525 Ga0207645_10010396
526 Ga0207645_10045212
527 Ga0207645_10067572
528 Ga0207643_10028193
529 Ga0207705_10010603
530 Ga0207705_10014840
531 Ga0207705_10287185
532 Ga0207707_10768684
533 Ga0207693_10034801
534 Ga0207662_10007606
535 Ga0207657_10067278
536 Ga0207657_10082003
537 Ga0207657_10190179
538 Ga0207649_10048404
539 Ga0207649_10153194
540 Ga0207649_10200106
541 Ga0207652_10157591
542 Ga0207681_10058475
543 Ga0207681_10076405
544 Ga0207681_10153696
545 Ga0207681_10172247
546 Ga0207650_10004232
547 Ga0207650_10018589
548 Ga0207650_10231672
549 Ga0207659_10071625
550 Ga0207659_10170700
551 Ga0207659_10272026
552 Ga0207687_10006475
553 Ga0207700_10037100
554 Ga0207664_10018753
555 Ga0207664_10072381
556 Ga0207644_10014537
557 Ga0207644_10033449
558 Ga0207644_10037186
559 Ga0207644_10166813
560 Ga0207690_10073261
561 Ga0207690_10103201
562 Ga0207690_10694408
563 Ga0207706_10024799
564 Ga0207706_10066822
565 Ga0207706_10083040
566 Ga0207706_10111675
567 Ga0207709_10103813
568 Ga0207709_10365865
569 Ga0207670_10145585
570 Ga0207669_10075845
571 Ga0207669_10102872
572 Ga0207669_10236854
573 Ga0207704_10569968
574 Ga0207691_10006271
575 Ga0207691_10044474
576 Ga0207691_10266000
577 Ga0207711_10000510
578 Ga0207711_10005888
579 Ga0207711_10013710
580 Ga0207711_10071262
581 Ga0207711_10609158
582 Ga0207661_10652995
583 Ga0207679_10027841
584 Ga0207679_10054437
585 Ga0207679_10150558
586 Ga0207679_10209059
587 Ga0207667_10188098
588 Ga0207667_10476337
589 Ga0207651_10219347
590 Ga0207651_10379043
591 Ga0207651_10539628
592 Ga0207712_10076389
593 Ga0207668_10881147
594 Ga0207640_10238017
595 Ga0207640_10444791
596 Ga0207658_10006731
597 Ga0207658_10008217
598 Ga0207658_10049772
599 Ga0207658_10213886
600 Ga0207658_10576092
601 Ga0207677_10001503
602 Ga0207677_10007053
603 Ga0207703_10000896
604 Ga0207703_10435435
605 Ga0207639_10046814
606 Ga0207639_10800538
607 Ga0207678_10006779
608 Ga0207678_10022618
609 Ga0207702_10112703
610 Ga0207702_10341213
611 Ga0207676_10203031
612 Ga0207676_10468909
613 Ga0207675_100164068
614 Ga0207683_10165408
615 Ga0207683_10475685
616 Ga0207683_10791532
617 Ga0207698_10009614
618 Ga0207698_10150314
619 Ga0207698_10939908
620 Ga0268266_10047932
621 Ga0268266_10309831
622 Ga0268265_10072933
623 Ga0268265_10156587
624 Ga0268265_10239066
625 Ga0268264_10046268
626 Ga0268264_10235826
627 Ga0265770_1000056
628 Ga0265760_10000261
629 Ga0307408_100238856
630 Ga0307408_100712062
631 Ga0307405_10014907
632 Ga0307405_11096656
633 Ga0307413_10000649
634 Ga0307413_10019214
635 Ga0307413_10217809
636 Ga0307413_10724739
637 Ga0307410_10015780
638 Ga0307410_10017146
639 Ga0307410_10043565
640 Ga0307410_10161014
641 Ga0307410_10196207
642 Ga0307406_10349883
643 Ga0307406_10813739
644 Ga0307407_10008840
645 Ga0307407_10025403
646 Ga0307407_10079838
647 Ga0307412_10120728
648 Ga0307412_10157543
649 Ga0307412_10294440
650 Ga0307412_10882734
651 Ga0307409_100000240
652 Ga0307409_100000590
653 Ga0307409_100001643
654 Ga0307409_100038641
655 Ga0307409_100064907
656 Ga0307409_100122626
657 Ga0307409_100760701
658 Ga0307416_100024214
659 Ga0307416_100088012
660 Ga0307416_100142624
661 Ga0307416_100212196
662 Ga0307416_100286836
663 Ga0307416_101020714
664 Ga0307416_101086296
665 Ga0307414_10000921
666 Ga0307414_10010676
667 Ga0307414_10066851
668 Ga0307411_10005274
669 Ga0307411_10308386
670 Ga0307411_10454957
671 Ga0307411_10496710
672 Ga0307415_100001963
673 Ga0307415_100059394
674 Ga0307415_100077269
675 Ga0373935_0028440
676 Ga0395899_0025757
677 Ga0395900_0039205
678 Ga0395900_0256710
679 Ga0395898_0240921
680 Ga0395905_0000956
681 Ga0395905_0018446
682 Ga0395905_0050332
683 Ga0395905_0234849
684 Ga0436364_0103913
685 Ga0395901_0095231
686 Ga0395901_0625554
687 Ga0451793_1287428
688 Ga0439445_0128439
689 Ga0466957_0074199
690 Ga0466967_0040142
691 Ga0466967_0142378
692 Ga0495585_0064753
693 Ga0495663_0001367
694 Ga0495598_0013213
695 Ga0495621_0028172
696 Ga0495668_0014787
697 Ga0495669_0011493
698 Ga0495669_0013437
699 Ga0495669_0071437
700 Ga0495669_0139743
701 Ga0495677_0034158
702 Ga0495685_038798
703 Ga0496102_0517755
704 Ga0496106_0554282
705 Ga0496107_0158493
706 Ga0496109_0229807
707 Ga0496110_0000561
708 Ga0496110_0299809
709 Ga0496111_0093994
710 Ga0496111_0100449
711 Ga0496111_0158115
712 Ga0496112_0541116
713 Ga0501256_007441
714 Ga0500658_0000023

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

10

56

0.98

PF16925

TetR_C_13

Tetracyclin repressor-like, C-terminal domain

79

185

0.96

PF21993

TetR_C_13_2

Transcriptional regulator LmrA/YxaF-like, C-terminal domain

79

184

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bru-assembly1.cif.gz_B crystal structure of regulatory protein tetr from rhodobacter sphaeroides 0.8544 6 184
1sgm-assembly1.cif.gz_B crystal structure of hypothetical protein yxaf 0.8428 5 187
4l62-assembly1.cif.gz_C crystal structure of pseudomonas aeruginosa transcriptional regulator pa2196 bound to its operator dna 0.8383 2 187
6zui-assembly1.cif.gz_A crystal structure of the cys-ser mutant of the cpyfp-based biosensor for hypochlorous acid 0.8268 104 192
2g7s-assembly1.cif.gz_A-2 the crystal structure of transcriptional regulator, tetr family, from agrobacterium tumefaciens 0.8263 2 192
ID Description Score Start End Superfamily
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.999 6 52 1.10.10.60
3br3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9777 7 52 1.10.10.60
3br5A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9775 6 52 1.10.10.60
3btjA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9768 6 52 1.10.10.60
3br6A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9766 6 52 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A0N1BLJ9-F1-model_v4 TetR family transcriptional regulator 0.9707 3 197 GO:0003677
GO:0006355
AF-A0A3D2W0B4-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9696 6 199 GO:0003677
GO:0006355
AF-A0A538S0V4-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9614 2 200 GO:0003677
GO:0006355
AF-A0A7Y3I4P3-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9614 16 198 GO:0003677
GO:0006355
AF-A0A7Y1YU34-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9578 1 200 GO:0003677
GO:0006355

Map