F419393

General Info

Members Datasets Scaffolds Average Seq Length
353 199 706 277

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10031287|Ga0157380_100312872
Length 330
Sequence MSFRRPNWGTFRAFVRGESVRPARFPKDLRAHAATGGNQLRRTVMDLNALVQNASVTLVALAWKLAGAAALWLAGRWLIAFVTRLVAQALDKQQFDVTLARYAKTALKIVLNTALIVALLGFFGVETTSFAALLAAGGVAIGVAWGGLLANFAAGVFLVFLRPFKVGDDVTAGGVRGTVEAIGLFGTVINTPDNVHTIVGNNKVFGDTIQNFSANPYRRVDLTAIINQSVDHRTAIRVLKQRLSAIPNVLASPAPDVDVLEFTPAGPQLCVRPYCNNDHYWQVYFDTNRLIREAFGEAGFPAPMPAYAVSGPFVGPALDAGNGASAARRG

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
121 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
127 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
128 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
131 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
132 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
133 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
134 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
135 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
136 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
137 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
138 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
139 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
140 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
141 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
142 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
143 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
144 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
145 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
146 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
147 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
148 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
149 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
150 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
151 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
152 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
153 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
154 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
155 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
156 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
157 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
160 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
161 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
164 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
165 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
168 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
171 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
172 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
178 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
179 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
180 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
181 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
182 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
183 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
184 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
185 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
187 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
188 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
189 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
190 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
191 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
192 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
193 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
194 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
195 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
196 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
197 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
198 2831426010 Nostoc sp. 106C Isolate Unclassified
199 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.15
Metatranscriptomes 0.28
Isolates 0.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.37
Rhizosphere 91.78
Stem 0
Stem Tuber 0
Unclassified 2.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10031287 3300014326 Bacteria 4084
2 JGI24746J21847_1003729 3300001977 Bacteria 2408
3 Ga0065712_10075598 3300005290 Bacteria 3826
4 Ga0065715_10001042 3300005293 Bacteria 7283
5 Ga0065715_10099442 3300005293 Bacteria 3411
6 Ga0065715_10135279 3300005293 Bacteria 1941
7 Ga0065715_10170397 3300005293 Bacteria 1551
8 Ga0065707_10003102 3300005295 Bacteria 5616
9 Ga0070676_10020425 3300005328 Bacteria 3697
10 Ga0070683_100000298 3300005329 Bacteria 34255
11 Ga0070670_100516697 3300005331 Bacteria 1063
12 Ga0070677_10003719 3300005333 Bacteria 4935
13 Ga0070677_10094010 3300005333 Bacteria 1309
14 Ga0068869_100010713 3300005334 Bacteria 5986
15 Ga0070666_10026737 3300005335 Bacteria 3773
16 Ga0070666_10085609 3300005335 Bacteria 2159
17 Ga0070689_100035174 3300005340 Bacteria 3826
18 Ga0070687_100075138 3300005343 Bacteria 1826
19 Ga0070661_100002563 3300005344 Bacteria 12457
20 Ga0070669_100032772 3300005353 Bacteria 3754
21 Ga0070669_100038678 3300005353 Bacteria 3464
22 Ga0070669_100332743 3300005353 Bacteria 1229
23 Ga0070669_100438843 3300005353 Bacteria 1074
24 Ga0070675_100220240 3300005354 Bacteria 1652
25 Ga0070675_100413067 3300005354 Bacteria 1206
26 Ga0070675_100497422 3300005354 Bacteria 1098
27 Ga0070671_100208048 3300005355 Bacteria 1659
28 Ga0070671_100593233 3300005355 Bacteria 957
29 Ga0070674_100009078 3300005356 Bacteria 5946
30 Ga0070674_100010890 3300005356 Bacteria 5516
31 Ga0070674_100083055 3300005356 Bacteria 2293
32 Ga0070674_100099007 3300005356 Bacteria 2120
33 Ga0070673_100015658 3300005364 Bacteria 5334
34 Ga0070688_100004966 3300005365 Bacteria 6959
35 Ga0070667_100045418 3300005367 Bacteria 3693
36 Ga0070667_100197360 3300005367 Bacteria 1784
37 Ga0070713_100005622 3300005436 Bacteria 8594
38 Ga0070701_10119059 3300005438 Bacteria 1485
39 Ga0070700_100045774 3300005441 Bacteria 2700
40 Ga0070678_100151948 3300005456 Bacteria 1866
41 Ga0070678_100190654 3300005456 Bacteria 1685
42 Ga0070678_100391510 3300005456 Bacteria 1205
43 Ga0070662_100066579 3300005457 Bacteria 2643
44 Ga0070662_100129273 3300005457 Bacteria 1945
45 Ga0068867_100287793 3300005459 Bacteria 1350
46 Ga0070685_10056634 3300005466 Bacteria 2279
47 Ga0070685_10095056 3300005466 Bacteria 1811
48 Ga0070684_100000117 3300005535 Bacteria 51696
49 Ga0068853_100234228 3300005539 Bacteria 1681
50 Ga0070672_100145013 3300005543 Bacteria 1961
51 Ga0070686_100014146 3300005544 Bacteria 4590
52 Ga0070686_100195921 3300005544 Bacteria 1445
53 Ga0070665_100002932 3300005548 Bacteria 18423
54 Ga0070665_100154774 3300005548 Bacteria 2294
55 Ga0070665_100285933 3300005548 Bacteria 1651
56 Ga0070704_100240599 3300005549 Bacteria 1481
57 Ga0068855_100429032 3300005563 Bacteria 1445
58 Ga0070664_100008568 3300005564 Bacteria 8273
59 Ga0070664_100091177 3300005564 Bacteria 2638
60 Ga0068857_100133605 3300005577 Bacteria 2239
61 Ga0070702_100063655 3300005615 Bacteria 2155
62 Ga0068852_100253094 3300005616 Bacteria 1688
63 Ga0068852_100420163 3300005616 Bacteria 1319
64 Ga0068859_100209819 3300005617 Bacteria 2034
65 Ga0068859_100251657 3300005617 Bacteria 1857
66 Ga0068864_100054556 3300005618 Bacteria 3449
67 Ga0068864_100423926 3300005618 Bacteria 1268
68 Ga0068861_100057297 3300005719 Bacteria 2976
69 Ga0068861_100140602 3300005719 Bacteria 1970
70 Ga0068861_100664619 3300005719 Bacteria 964
71 Ga0068851_10273875 3300005834 Bacteria 963
72 Ga0068870_10084800 3300005840 Unclassified 1759
73 Ga0068870_10088725 3300005840 Bacteria 1724
74 Ga0068863_100009372 3300005841 Bacteria 9555
75 Ga0068858_100036808 3300005842 Bacteria 4537
76 Ga0068858_100068803 3300005842 Bacteria 3281
77 Ga0068858_100326679 3300005842 Bacteria 1467
78 Ga0068860_100030396 3300005843 Bacteria 5195
79 Ga0068862_100017285 3300005844 Bacteria 6004
80 Ga0068862_100101435 3300005844 Bacteria 2518
81 Ga0068862_100499227 3300005844 Bacteria 1155
82 Ga0081539_10000720 3300005985 Bacteria 66266
83 Ga0097621_100018431 3300006237 Bacteria 5332
84 Ga0097621_100201570 3300006237 Bacteria 1728
85 Ga0097621_100265092 3300006237 Bacteria 1508
86 Ga0068871_100046186 3300006358 Bacteria 3507
87 Ga0068871_100087763 3300006358 Bacteria 2587
88 Ga0068871_100101466 3300006358 Bacteria 2412
89 Ga0075428_100012138 3300006844 Bacteria 9585
90 Ga0075428_100017457 3300006844 Bacteria 7931
91 Ga0075428_100439158 3300006844 Unclassified 1398
92 Ga0075430_100007884 3300006846 Bacteria 9003
93 Ga0075431_100000921 3300006847 Bacteria 25923
94 Ga0075431_100031462 3300006847 Bacteria 5466
95 Ga0075431_100256385 3300006847 Bacteria 1776
96 Ga0075433_10000581 3300006852 Bacteria 24193
97 Ga0075433_10045556 3300006852 Unclassified 3813
98 Ga0075433_10132213 3300006852 Bacteria 2217
99 Ga0075434_100031923 3300006871 Bacteria 5192
100 Ga0075429_100007075 3300006880 Bacteria 9738
101 Ga0075429_100066940 3300006880 Bacteria 3126
102 Ga0068865_100016123 3300006881 Bacteria 4774
103 Ga0097620_100209816 3300006931 Bacteria 2034
104 Ga0097620_100251659 3300006931 Bacteria 1857
105 Ga0105240_10128322 3300009093 Bacteria 3045
106 Ga0105240_10579124 3300009093 Bacteria 1238
107 Ga0111539_10000112 3300009094 Bacteria 89047
108 Ga0111539_10000577 3300009094 Bacteria 47124
109 Ga0111539_10008292 3300009094 Bacteria 13229
110 Ga0111539_10117218 3300009094 Bacteria 3122
111 Ga0111539_10292265 3300009094 Bacteria 1896
112 Ga0111539_10921282 3300009094 Bacteria 1016
113 Ga0105245_10075713 3300009098 Bacteria 3065
114 Ga0105245_10255781 3300009098 Bacteria 1703
115 Ga0105245_10365172 3300009098 Bacteria 1434
116 Ga0105245_10377061 3300009098 Bacteria 1412
117 Ga0114129_10000374 3300009147 Bacteria 52129
118 Ga0114129_10175435 3300009147 Bacteria 2919
119 Ga0105243_10018166 3300009148 Bacteria 5323
120 Ga0105241_10081912 3300009174 Bacteria 2529
121 Ga0105242_10003047 3300009176 Bacteria 13103
122 Ga0105242_10269219 3300009176 Bacteria 1542
123 Ga0105248_10008487 3300009177 Bacteria 11277
124 Ga0105248_10017094 3300009177 Bacteria 7990
125 Ga0105248_10026470 3300009177 Bacteria 6453
126 Ga0105248_10077807 3300009177 Bacteria 3729
127 Ga0105248_10135725 3300009177 Bacteria 2776
128 Ga0105237_10161409 3300009545 Bacteria 2240
129 Ga0105249_10000263 3300009553 Bacteria 56064
130 Ga0105249_10004224 3300009553 Bacteria 12417
131 Ga0105249_10445659 3300009553 Bacteria 1333
132 Ga0105249_10490323 3300009553 Bacteria 1272
133 Ga0105249_10550270 3300009553 Bacteria 1204
134 Ga0157374_10010803 3300013296 Bacteria 7875
135 Ga0157374_10013523 3300013296 Bacteria 7124
136 Ga0157378_10352064 3300013297 Bacteria 1439
137 Ga0163162_10002891 3300013306 Bacteria 16347
138 Ga0157375_10096509 3300013308 Bacteria 3029
139 Ga0157375_10969855 3300013308 Unclassified 991
140 Ga0163163_10000008 3300014325 Bacteria 286490
141 Ga0163163_10139843 3300014325 Bacteria 2463
142 Ga0157380_10115821 3300014326 Bacteria 2261
143 Ga0157380_10774628 3300014326 Bacteria 973
144 Ga0157377_10237629 3300014745 Bacteria 1174
145 Ga0157379_10008752 3300014968 Bacteria 8823
146 Ga0157379_10138751 3300014968 Bacteria 2191
147 Ga0157376_10005981 3300014969 Bacteria 8550
148 Ga0157376_10096979 3300014969 Bacteria 2567
149 Ga0157376_10184870 3300014969 Bacteria 1907
150 Ga0163161_10069052 3300017792 Bacteria 2582
151 Ga0207697_10020322 3300025315 Bacteria 2719
152 Ga0207682_10003649 3300025893 Bacteria 6642
153 Ga0207688_10028050 3300025901 Bacteria 3098
154 Ga0207680_10011934 3300025903 Bacteria 4411
155 Ga0207680_10041106 3300025903 Bacteria 2696
156 Ga0207645_10092802 3300025907 Bacteria 1942
157 Ga0207643_10043337 3300025908 Bacteria 2539
158 Ga0207643_10048345 3300025908 Bacteria 2409
159 Ga0207654_10069138 3300025911 Bacteria 2091
160 Ga0207695_10095981 3300025913 Bacteria 2967
161 Ga0207671_10387115 3300025914 Bacteria 1111
162 Ga0207662_10041887 3300025918 Bacteria 2697
163 Ga0207649_10006507 3300025920 Bacteria 6346
164 Ga0207681_10005209 3300025923 Bacteria 7983
165 Ga0207650_10367756 3300025925 Bacteria 1186
166 Ga0207659_10008874 3300025926 Bacteria 6266
167 Ga0207659_10127819 3300025926 Bacteria 1957
168 Ga0207659_10267982 3300025926 Bacteria 1392
169 Ga0207687_10188539 3300025927 Bacteria 1603
170 Ga0207687_10548159 3300025927 Bacteria 970
171 Ga0207700_10022369 3300025928 Bacteria 4338
172 Ga0207644_10127523 3300025931 Bacteria 1944
173 Ga0207644_10175973 3300025931 Bacteria 1674
174 Ga0207706_10006644 3300025933 Bacteria 10700
175 Ga0207706_10087626 3300025933 Bacteria 2738
176 Ga0207706_10275388 3300025933 Bacteria 1468
177 Ga0207686_10006070 3300025934 Bacteria 6487
178 Ga0207686_10031541 3300025934 Bacteria 3148
179 Ga0207709_10071760 3300025935 Bacteria 2200
180 Ga0207709_10136334 3300025935 Bacteria 1681
181 Ga0207670_10163727 3300025936 Bacteria 1662
182 Ga0207669_10208115 3300025937 Bacteria 1425
183 Ga0207704_10181135 3300025938 Bacteria 1522
184 Ga0207704_10184394 3300025938 Bacteria 1511
185 Ga0207691_10016584 3300025940 Bacteria 6992
186 Ga0207691_10095008 3300025940 Bacteria 2667
187 Ga0207691_10166900 3300025940 Bacteria 1929
188 Ga0207711_10074755 3300025941 Bacteria 2947
189 Ga0207711_10113689 3300025941 Bacteria 2410
190 Ga0207711_10152916 3300025941 Bacteria 2083
191 Ga0207711_10314202 3300025941 Bacteria 1447
192 Ga0207689_10017328 3300025942 Bacteria 6097
193 Ga0207689_10021365 3300025942 Bacteria 5443
194 Ga0207661_10060788 3300025944 Bacteria 3050
195 Ga0207679_10087332 3300025945 Bacteria 2401
196 Ga0207679_10164937 3300025945 Bacteria 1818
197 Ga0207679_10226693 3300025945 Bacteria 1575
198 Ga0207679_10341856 3300025945 Bacteria 1302
199 Ga0207712_10021144 3300025961 Bacteria 4269
200 Ga0207712_10052815 3300025961 Bacteria 2848
201 Ga0207712_10112994 3300025961 Bacteria 2041
202 Ga0207712_10390217 3300025961 Bacteria 1167
203 Ga0207668_10159852 3300025972 Bacteria 1754
204 Ga0207668_10321389 3300025972 Bacteria 1284
205 Ga0207640_10416147 3300025981 Bacteria 1099
206 Ga0207703_10011523 3300026035 Bacteria 6878
207 Ga0207639_10104167 3300026041 Bacteria 2300
208 Ga0207678_10012541 3300026067 Bacteria 7444
209 Ga0207708_10079797 3300026075 Bacteria 2514
210 Ga0207648_10065722 3300026089 Bacteria 3162
211 Ga0207648_10490005 3300026089 Bacteria 1124
212 Ga0207676_10137239 3300026095 Bacteria 2089
213 Ga0207676_10264630 3300026095 Bacteria 1554
214 Ga0207674_10065166 3300026116 Bacteria 3673
215 Ga0207674_10152175 3300026116 Bacteria 2270
216 Ga0207675_100117726 3300026118 Bacteria 2512
217 Ga0207675_100217683 3300026118 Bacteria 1839
218 Ga0207683_10012949 3300026121 Bacteria 7122
219 Ga0207683_10177411 3300026121 Bacteria 1931
220 Ga0207683_10235909 3300026121 Bacteria 1668
221 Ga0207683_10258113 3300026121 Bacteria 1591
222 Ga0207698_10185701 3300026142 Bacteria 1846
223 Ga0207428_10012633 3300027907 Bacteria 7407
224 Ga0207428_10014047 3300027907 Bacteria 6974
225 Ga0207428_10015700 3300027907 Bacteria 6542
226 Ga0207428_10053206 3300027907 Bacteria 3229
227 Ga0268266_10013855 3300028379 Bacteria 6941
228 Ga0268266_10194912 3300028379 Bacteria 1851
229 Ga0268266_10211495 3300028379 Bacteria 1779
230 Ga0268265_10050495 3300028380 Bacteria 3134
231 Ga0268265_10089958 3300028380 Bacteria 2451
232 Ga0268265_10225033 3300028380 Bacteria 1644
233 Ga0268264_10260542 3300028381 Bacteria 1615
234 Ga0265760_10040882 3300031090 Bacteria 1382
235 Ga0307408_100035190 3300031548 Bacteria 3512
236 Ga0307410_10246524 3300031852 Bacteria 1387
237 Ga0307406_10179155 3300031901 Bacteria 1541
238 Ga0307412_10219535 3300031911 Bacteria 1456
239 Ga0307416_100003707 3300032002 Bacteria 9056
240 Ga0373930_0000247 3300034816 Bacteria 6851
241 Ga0373948_0000646 3300034817 Bacteria 4504
242 Ga0373958_0001225 3300034819 Bacteria 3431
243 Ga0373959_0000686 3300034820 Bacteria 5790
244 Ga0373929_0002330 3300035085 Bacteria 3491
245 Ga0373940_0011941 3300035088 Bacteria 2073
246 Ga0373949_0010426 3300035090 Bacteria 2037
247 Ga0373949_0015499 3300035090 Bacteria 1703
248 Ga0373951_0001356 3300035091 Bacteria 6433
249 Ga0373923_0024706 3300035111 Bacteria 2373
250 Ga0373932_0001348 3300035112 Bacteria 6874
251 Ga0373939_0005791 3300035114 Bacteria 2951
252 Ga0373941_0013178 3300035115 Bacteria 2179
253 Ga0373960_0011108 3300035121 Bacteria 2211
254 Ga0373955_0037634 3300035172 Bacteria 2573
255 Ga0373942_0000220 3300035207 Bacteria 15001
256 Ga0373961_0002714 3300035241 Bacteria 4527
257 Ga0373962_0006418 3300035242 Bacteria 2849
258 Ga0373931_0001742 3300035691 Bacteria 9434
259 Ga0373931_0134865 3300035691 Bacteria 1425
260 Ga0373933_0009614 3300035724 Bacteria 5282
261 Ga0373937_0000180 3300036401 Bacteria 61995
262 Ga0451853_1148526 3300041512 Bacteria 1316
263 Ga0439435_0001910 3300042436 Bacteria 3998
264 Ga0439460_0068456 3300042461 Bacteria 1095
265 Ga0451576_0005992 3300045051 Bacteria 15031
266 Ga0451576_0030251 3300045051 Bacteria 5789
267 Ga0451576_0259110 3300045051 Bacteria 1817
268 Ga0495580_0005499 3300046472 Bacteria 10468
269 Ga0495639_0053836 3300046475 Bacteria 1834
270 Ga0495639_0146551 3300046475 Bacteria 1137
271 Ga0495652_0235844 3300046529 Bacteria 1365
272 Ga0495658_0046623 3300046683 Bacteria 2437
273 Ga0495613_0073570 3300046689 Bacteria 2490
274 Ga0495680_0138342 3300047322 Bacteria 1784
275 Ga0496100_0008160 3300048903 Bacteria 5830
276 Ga0496101_0000950 3300048904 Bacteria 17103
277 Ga0496104_0010839 3300048907 Bacteria 8153
278 Ga0496104_0161929 3300048907 Bacteria 2146
279 Ga0496105_0036468 3300048908 Bacteria 4051
280 Ga0496105_0061174 3300048908 Bacteria 3107
281 Ga0496105_0385765 3300048908 Bacteria 1114
282 Ga0496106_0169379 3300048909 Bacteria 1730
283 Ga0496107_0031929 3300048910 Bacteria 3761
284 Ga0496107_0193585 3300048910 Bacteria 1511
285 Ga0496107_0373636 3300048910 Bacteria 1060
286 Ga0496108_0069479 3300048911 Bacteria 2972
287 Ga0496109_0001090 3300048912 Bacteria 22529
288 Ga0496109_0073414 3300048912 Bacteria 3144
289 Ga0496110_0039819 3300048913 Bacteria 4093
290 Ga0496110_0290765 3300048913 Bacteria 1488
291 Ga0496110_0314467 3300048913 Bacteria 1426
292 Ga0496110_0328083 3300048913 Bacteria 1394
293 Ga0496112_0022512 3300048915 Bacteria 6006
294 Ga0496112_0104488 3300048915 Bacteria 2802
295 Ga0496113_0092984 3300048916 Bacteria 2327
296 Ga0496114_0010149 3300048917 Bacteria 7493
297 Ga0496114_0093038 3300048917 Bacteria 2563
298 Ga0496114_0130054 3300048917 Bacteria 2173
299 Ga0496114_0138903 3300048917 Bacteria 2102
300 Ga0496114_0343060 3300048917 Bacteria 1321
301 Ga0501036_0004354 3300049572 Bacteria 11421
302 Ga0501036_0338337 3300049572 Bacteria 1257
303 Ga0501040_0001546 3300049576 Bacteria 14646
304 Ga0501041_0048782 3300049577 Bacteria 2579
305 Ga0501042_0008122 3300049578 Bacteria 6912
306 Ga0501046_0006942 3300049580 Bacteria 9979
307 Ga0501071_0001006 3300049587 Bacteria 15498
308 Ga0501071_0043738 3300049587 Bacteria 3212
309 Ga0501072_0007212 3300049588 Bacteria 8437
310 Ga0501072_0181375 3300049588 Bacteria 1679
311 Ga0501072_0191442 3300049588 Bacteria 1631
312 Ga0501075_0000713 3300049591 Bacteria 20583
313 Ga0501076_0000324 3300049592 Bacteria 29536
314 Ga0501076_0038874 3300049592 Bacteria 3735
315 Ga0501076_0694707 3300049592 Bacteria 840
316 Ga0501079_0135969 3300049741 Bacteria 1914
317 Ga0501080_0305931 3300049742 Bacteria 1441
318 Ga0501081_0000289 3300049743 Bacteria 26773
319 Ga0501283_020024 3300049779 Bacteria 1063
320 Ga0501035_0330053 3300049822 Bacteria 1280
321 Ga0501045_0007248 3300049824 Bacteria 7699
322 Ga0501045_0008752 3300049824 Bacteria 7062
323 Ga0501045_0036025 3300049824 Unclassified 3593
324 nmdc:mga05p37_263456_c1 3300050507 Bacteria 2062
325 nmdc:mga05p37_345940_c1 3300050507 Bacteria 1752
326 nmdc:mga05p37_34_c1 3300050507 Bacteria 111954
327 nmdc:mga09592_131221_c1 3300050508 Bacteria 2156
328 nmdc:mga09592_95516_c1 3300050508 Unclassified 2543
329 nmdc:mga0qj67_256846_c1 3300050509 Bacteria 1418
330 nmdc:mga0qj67_435_c1 3300050509 Bacteria 28521
331 nmdc:mga06r32_213752_c1 3300050510 Bacteria 1916
332 nmdc:mga06r32_2574_c1 3300050510 Bacteria 16190
333 nmdc:mga06r32_267552_c1 3300050510 Bacteria 1697
334 nmdc:mga08y16_118467_c1 3300050511 Bacteria 2756
335 nmdc:mga08y16_159_c2 3300050511 Bacteria 44026
336 nmdc:mga08y16_33195_c1 3300050511 Bacteria 5422
337 nmdc:mga08y16_41080_c1 3300050511 Bacteria 4846
338 nmdc:mga08y16_696666_c1 3300050511 Bacteria 1016
339 nmdc:mga08y16_8729_c1 3300050511 Bacteria 10630
340 nmdc:mga0n895_36364_c1 3300050512 Bacteria 4754
341 nmdc:mga0rr50_17603_c1 3300050513 Bacteria 4775
342 nmdc:mga0a205_12570_c1 3300050515 Bacteria 7837
343 nmdc:mga0a205_147355_c1 3300050515 Bacteria 2254
344 nmdc:mga0a205_25500_c1 3300050515 Bacteria 5632
345 nmdc:mga0a205_43961_c1 3300050515 Unclassified 4305
346 Ga0501084_0008121 3300054114 Bacteria 8647
347 Ga0501084_0100775 3300054114 Bacteria 2425
348 Ga0501084_0260792 3300054114 Bacteria 1463
349 Ga0501082_0001496 3300060353 Bacteria 20567
350 Ga0530510_0004513 3300061734 Bacteria 9639
351 Ga0530510_0213607 3300061734 Unclassified 1433
352 2831432466 2831426010 Bacteria 8662725
353 2913943639 2913939268 Bacteria 8559644
354 Ga0157380_10031287
355 JGI24746J21847_1003729
356 Ga0065712_10075598
357 Ga0065715_10001042
358 Ga0065715_10099442
359 Ga0065715_10135279
360 Ga0065715_10170397
361 Ga0065707_10003102
362 Ga0070676_10020425
363 Ga0070683_100000298
364 Ga0070670_100516697
365 Ga0070677_10003719
366 Ga0070677_10094010
367 Ga0068869_100010713
368 Ga0070666_10026737
369 Ga0070666_10085609
370 Ga0070689_100035174
371 Ga0070687_100075138
372 Ga0070661_100002563
373 Ga0070669_100032772
374 Ga0070669_100038678
375 Ga0070669_100332743
376 Ga0070669_100438843
377 Ga0070675_100220240
378 Ga0070675_100413067
379 Ga0070675_100497422
380 Ga0070671_100208048
381 Ga0070671_100593233
382 Ga0070674_100009078
383 Ga0070674_100010890
384 Ga0070674_100083055
385 Ga0070674_100099007
386 Ga0070673_100015658
387 Ga0070688_100004966
388 Ga0070667_100045418
389 Ga0070667_100197360
390 Ga0070713_100005622
391 Ga0070701_10119059
392 Ga0070700_100045774
393 Ga0070678_100151948
394 Ga0070678_100190654
395 Ga0070678_100391510
396 Ga0070662_100066579
397 Ga0070662_100129273
398 Ga0068867_100287793
399 Ga0070685_10056634
400 Ga0070685_10095056
401 Ga0070684_100000117
402 Ga0068853_100234228
403 Ga0070672_100145013
404 Ga0070686_100014146
405 Ga0070686_100195921
406 Ga0070665_100002932
407 Ga0070665_100154774
408 Ga0070665_100285933
409 Ga0070704_100240599
410 Ga0068855_100429032
411 Ga0070664_100008568
412 Ga0070664_100091177
413 Ga0068857_100133605
414 Ga0070702_100063655
415 Ga0068852_100253094
416 Ga0068852_100420163
417 Ga0068859_100209819
418 Ga0068859_100251657
419 Ga0068864_100054556
420 Ga0068864_100423926
421 Ga0068861_100057297
422 Ga0068861_100140602
423 Ga0068861_100664619
424 Ga0068851_10273875
425 Ga0068870_10084800
426 Ga0068870_10088725
427 Ga0068863_100009372
428 Ga0068858_100036808
429 Ga0068858_100068803
430 Ga0068858_100326679
431 Ga0068860_100030396
432 Ga0068862_100017285
433 Ga0068862_100101435
434 Ga0068862_100499227
435 Ga0081539_10000720
436 Ga0097621_100018431
437 Ga0097621_100201570
438 Ga0097621_100265092
439 Ga0068871_100046186
440 Ga0068871_100087763
441 Ga0068871_100101466
442 Ga0075428_100012138
443 Ga0075428_100017457
444 Ga0075428_100439158
445 Ga0075430_100007884
446 Ga0075431_100000921
447 Ga0075431_100031462
448 Ga0075431_100256385
449 Ga0075433_10000581
450 Ga0075433_10045556
451 Ga0075433_10132213
452 Ga0075434_100031923
453 Ga0075429_100007075
454 Ga0075429_100066940
455 Ga0068865_100016123
456 Ga0097620_100209816
457 Ga0097620_100251659
458 Ga0105240_10128322
459 Ga0105240_10579124
460 Ga0111539_10000112
461 Ga0111539_10000577
462 Ga0111539_10008292
463 Ga0111539_10117218
464 Ga0111539_10292265
465 Ga0111539_10921282
466 Ga0105245_10075713
467 Ga0105245_10255781
468 Ga0105245_10365172
469 Ga0105245_10377061
470 Ga0114129_10000374
471 Ga0114129_10175435
472 Ga0105243_10018166
473 Ga0105241_10081912
474 Ga0105242_10003047
475 Ga0105242_10269219
476 Ga0105248_10008487
477 Ga0105248_10017094
478 Ga0105248_10026470
479 Ga0105248_10077807
480 Ga0105248_10135725
481 Ga0105237_10161409
482 Ga0105249_10000263
483 Ga0105249_10004224
484 Ga0105249_10445659
485 Ga0105249_10490323
486 Ga0105249_10550270
487 Ga0157374_10010803
488 Ga0157374_10013523
489 Ga0157378_10352064
490 Ga0163162_10002891
491 Ga0157375_10096509
492 Ga0157375_10969855
493 Ga0163163_10000008
494 Ga0163163_10139843
495 Ga0157380_10115821
496 Ga0157380_10774628
497 Ga0157377_10237629
498 Ga0157379_10008752
499 Ga0157379_10138751
500 Ga0157376_10005981
501 Ga0157376_10096979
502 Ga0157376_10184870
503 Ga0163161_10069052
504 Ga0207697_10020322
505 Ga0207682_10003649
506 Ga0207688_10028050
507 Ga0207680_10011934
508 Ga0207680_10041106
509 Ga0207645_10092802
510 Ga0207643_10043337
511 Ga0207643_10048345
512 Ga0207654_10069138
513 Ga0207695_10095981
514 Ga0207671_10387115
515 Ga0207662_10041887
516 Ga0207649_10006507
517 Ga0207681_10005209
518 Ga0207650_10367756
519 Ga0207659_10008874
520 Ga0207659_10127819
521 Ga0207659_10267982
522 Ga0207687_10188539
523 Ga0207687_10548159
524 Ga0207700_10022369
525 Ga0207644_10127523
526 Ga0207644_10175973
527 Ga0207706_10006644
528 Ga0207706_10087626
529 Ga0207706_10275388
530 Ga0207686_10006070
531 Ga0207686_10031541
532 Ga0207709_10071760
533 Ga0207709_10136334
534 Ga0207670_10163727
535 Ga0207669_10208115
536 Ga0207704_10181135
537 Ga0207704_10184394
538 Ga0207691_10016584
539 Ga0207691_10095008
540 Ga0207691_10166900
541 Ga0207711_10074755
542 Ga0207711_10113689
543 Ga0207711_10152916
544 Ga0207711_10314202
545 Ga0207689_10017328
546 Ga0207689_10021365
547 Ga0207661_10060788
548 Ga0207679_10087332
549 Ga0207679_10164937
550 Ga0207679_10226693
551 Ga0207679_10341856
552 Ga0207712_10021144
553 Ga0207712_10052815
554 Ga0207712_10112994
555 Ga0207712_10390217
556 Ga0207668_10159852
557 Ga0207668_10321389
558 Ga0207640_10416147
559 Ga0207703_10011523
560 Ga0207639_10104167
561 Ga0207678_10012541
562 Ga0207708_10079797
563 Ga0207648_10065722
564 Ga0207648_10490005
565 Ga0207676_10137239
566 Ga0207676_10264630
567 Ga0207674_10065166
568 Ga0207674_10152175
569 Ga0207675_100117726
570 Ga0207675_100217683
571 Ga0207683_10012949
572 Ga0207683_10177411
573 Ga0207683_10235909
574 Ga0207683_10258113
575 Ga0207698_10185701
576 Ga0207428_10012633
577 Ga0207428_10014047
578 Ga0207428_10015700
579 Ga0207428_10053206
580 Ga0268266_10013855
581 Ga0268266_10194912
582 Ga0268266_10211495
583 Ga0268265_10050495
584 Ga0268265_10089958
585 Ga0268265_10225033
586 Ga0268264_10260542
587 Ga0265760_10040882
588 Ga0307408_100035190
589 Ga0307410_10246524
590 Ga0307406_10179155
591 Ga0307412_10219535
592 Ga0307416_100003707
593 Ga0373930_0000247
594 Ga0373948_0000646
595 Ga0373958_0001225
596 Ga0373959_0000686
597 Ga0373929_0002330
598 Ga0373940_0011941
599 Ga0373949_0010426
600 Ga0373949_0015499
601 Ga0373951_0001356
602 Ga0373923_0024706
603 Ga0373932_0001348
604 Ga0373939_0005791
605 Ga0373941_0013178
606 Ga0373960_0011108
607 Ga0373955_0037634
608 Ga0373942_0000220
609 Ga0373961_0002714
610 Ga0373962_0006418
611 Ga0373931_0001742
612 Ga0373931_0134865
613 Ga0373933_0009614
614 Ga0373937_0000180
615 Ga0451853_1148526
616 Ga0439435_0001910
617 Ga0439460_0068456
618 Ga0451576_0005992
619 Ga0451576_0030251
620 Ga0451576_0259110
621 Ga0495580_0005499
622 Ga0495639_0053836
623 Ga0495639_0146551
624 Ga0495652_0235844
625 Ga0495658_0046623
626 Ga0495613_0073570
627 Ga0495680_0138342
628 Ga0496100_0008160
629 Ga0496101_0000950
630 Ga0496104_0010839
631 Ga0496104_0161929
632 Ga0496105_0036468
633 Ga0496105_0061174
634 Ga0496105_0385765
635 Ga0496106_0169379
636 Ga0496107_0031929
637 Ga0496107_0193585
638 Ga0496107_0373636
639 Ga0496108_0069479
640 Ga0496109_0001090
641 Ga0496109_0073414
642 Ga0496110_0039819
643 Ga0496110_0290765
644 Ga0496110_0314467
645 Ga0496110_0328083
646 Ga0496112_0022512
647 Ga0496112_0104488
648 Ga0496113_0092984
649 Ga0496114_0010149
650 Ga0496114_0093038
651 Ga0496114_0130054
652 Ga0496114_0138903
653 Ga0496114_0343060
654 Ga0501036_0004354
655 Ga0501036_0338337
656 Ga0501040_0001546
657 Ga0501041_0048782
658 Ga0501042_0008122
659 Ga0501046_0006942
660 Ga0501071_0001006
661 Ga0501071_0043738
662 Ga0501072_0007212
663 Ga0501072_0181375
664 Ga0501072_0191442
665 Ga0501075_0000713
666 Ga0501076_0000324
667 Ga0501076_0038874
668 Ga0501076_0694707
669 Ga0501079_0135969
670 Ga0501080_0305931
671 Ga0501081_0000289
672 Ga0501283_020024
673 Ga0501035_0330053
674 Ga0501045_0007248
675 Ga0501045_0008752
676 Ga0501045_0036025
677 nmdc:mga05p37_263456_c1
678 nmdc:mga05p37_345940_c1
679 nmdc:mga05p37_34_c1
680 nmdc:mga09592_131221_c1
681 nmdc:mga09592_95516_c1
682 nmdc:mga0qj67_256846_c1
683 nmdc:mga0qj67_435_c1
684 nmdc:mga06r32_213752_c1
685 nmdc:mga06r32_2574_c1
686 nmdc:mga06r32_267552_c1
687 nmdc:mga08y16_118467_c1
688 nmdc:mga08y16_159_c2
689 nmdc:mga08y16_33195_c1
690 nmdc:mga08y16_41080_c1
691 nmdc:mga08y16_696666_c1
692 nmdc:mga08y16_8729_c1
693 nmdc:mga0n895_36364_c1
694 nmdc:mga0rr50_17603_c1
695 nmdc:mga0a205_12570_c1
696 nmdc:mga0a205_147355_c1
697 nmdc:mga0a205_25500_c1
698 nmdc:mga0a205_43961_c1
699 Ga0501084_0008121
700 Ga0501084_0100775
701 Ga0501084_0260792
702 Ga0501082_0001496
703 Ga0530510_0004513
704 Ga0530510_0213607
705 2831432466
706 2913943639

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00924

MS_channel_2nd

Mechanosensitive ion channel, beta-domain

147

214

0.98

PF21082

MS_channel_3rd

Mechanosensitive ion channel MscS, C-terminal

221

301

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2xk0-assembly1.cif.gz_A solution structure of the tudor domain from drosophila polycomblike (pcl) 0.8255 120 156
7raz-assembly1.cif.gz_D small conductance mechanosensitive channel mscs 0.7896 81 270
7raz-assembly1.cif.gz_D small conductance mechanosensitive channel mscs 0.786 81 270
3cc2-assembly1.cif.gz_A the refined crystal structure of the haloarcula marismortui large ribosomal subunit at 2.4 angstrom resolution with rrna sequence for the 23s rrna and genome-derived sequences for r-proteins 0.7851 120 158
1kqs-assembly1.cif.gz_A the haloarcula marismortui 50s complexed with a pretranslocational intermediate in protein synthesis 0.7792 120 158
ID Description Score Start End Superfamily
af_P0C0S1_129_178_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9544 119 168 2.30.30.60
af_A0A0P0WDR2_370_418_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.948 119 165 2.30.30.60
af_Q58543_201_249_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9396 119 167 2.30.30.60
af_P0C0S1_129_178_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9366 119 168 2.30.30.60
af_P75783_574_621_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9248 120 168 2.30.30.60
ID Description Score Start End GO Terms
AF-A0A7S2PAS9-F1-model_v4 Mechanosensitive ion channel MscS C-terminal domain-containing protein 0.926 145 249 GO:0008381
GO:0016020
AF-A0A7S2PAS9-F1-model_v4 Mechanosensitive ion channel MscS C-terminal domain-containing protein 0.9094 145 249 GO:0008381
GO:0016020
AF-A0A4Q5TU55-F1-model_v4 Mechanosensitive ion channel family protein 0.9075 119 257 GO:0005886
GO:0008381
AF-A0A838N6N7-F1-model_v4 deleted 0.9034 139 261
AF-A0A4U9K265-F1-model_v4 deleted 0.9022 103 215

Map