F419310

General Info

Members Datasets Scaffolds Average Seq Length
353 183 706 480

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100144089|Ga0070698_1001440892
Length 515
Sequence VAEESPGLDSARVTPLKDLRDWIALLEREGELVRVGAEVDPDLEVTEIVDRTVKAGGPALLFERPKGAAHPLLINQFGTERRMCLAFGVDQLDDVARKVSDVLEMQPPSGLMDKVRGLQKLKSIADSLPHTVRRGPVHEVVLQGDDVDLGLLPVQRCWPGDPAPFITLPAVITRDPRDGVRNVGMYRMQVIDRRTTFMHWQLHKDGRADWLATDGRIPVAVALGLDPITAYSASAPLPKHIDELMLAGFLRGAPVELVTGVTVDIEVPAHAEIVLEGYIDKDEELGDEGPFGDHTGYYTAAEPFPIFHVTAMTMRRDAVYPSIVVGRPPQEDAWLGKATERIFLPAIKATVPEIVDYDLPVAGAFHNCCIVSIRKAFPGHAHKVMHAIWGLGMLSLTKCIVVVDEHVDVHDYAQVLFYAGANVDPARDVVLARGPLDHLDHAPEHQFIGGKLGIDATAKLPEEGARPWPEEIEMSPEVRALVDGRWAEYGIELVPSAGNGSIDQTSRSLRQLLRR

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
40 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
41 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
68 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
69 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
81 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
86 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
87 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
88 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
89 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
90 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
91 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
92 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
100 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
104 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
105 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
106 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
107 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
112 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
113 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
114 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
115 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
116 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
117 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
125 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
126 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
127 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
128 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
129 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
130 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
131 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
132 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
133 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
164 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
165 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
166 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
178 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
179 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
183 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.43
Metatranscriptomes 0.57
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 14.45
Rhizosphere 84.99
Stem 0
Stem Tuber 0
Unclassified 0.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100144089 3300005471 Bacteria 2332
2 Ga0070658_10014128 3300005327 Bacteria 6411
3 Ga0070683_100001450 3300005329 Bacteria 18244
4 Ga0070683_100026877 3300005329 Bacteria 5187
5 Ga0070683_100042723 3300005329 Bacteria 4175
6 Ga0070683_100075842 3300005329 Bacteria 3143
7 Ga0070682_100054477 3300005337 Bacteria 2510
8 Ga0070703_10002984 3300005406 Bacteria 4836
9 Ga0070709_10054442 3300005434 Bacteria 2522
10 Ga0070714_100014006 3300005435 Bacteria 6434
11 Ga0070714_100049302 3300005435 Bacteria 3584
12 Ga0070714_100056204 3300005435 Bacteria 3366
13 Ga0070713_100082793 3300005436 Bacteria 2741
14 Ga0070678_100002896 3300005456 Bacteria 9503
15 Ga0070681_10179066 3300005458 Bacteria 2041
16 Ga0070685_10026285 3300005466 Bacteria 3207
17 Ga0070707_100005965 3300005468 Bacteria 11363
18 Ga0070707_100018735 3300005468 Bacteria 6517
19 Ga0070698_100125348 3300005471 Bacteria 2526
20 Ga0070698_100196657 3300005471 Bacteria 1953
21 Ga0070698_100260135 3300005471 Bacteria 1668
22 Ga0070679_100008243 3300005530 Bacteria 9800
23 Ga0070684_100000376 3300005535 Bacteria 30909
24 Ga0070684_100029214 3300005535 Bacteria 4670
25 Ga0070686_100016535 3300005544 Bacteria 4293
26 Ga0070695_100000001 3300005545 Bacteria 150757
27 Ga0068856_100012870 3300005614 Bacteria 8098
28 Ga0068856_100058979 3300005614 Bacteria 3791
29 Ga0081455_10006338 3300005937 Bacteria 12706
30 Ga0081455_10006824 3300005937 Bacteria 12170
31 Ga0081455_10128818 3300005937 Bacteria 1982
32 Ga0081538_10000151 3300005981 Bacteria 72583
33 Ga0081538_10003411 3300005981 Bacteria 15033
34 Ga0081538_10030421 3300005981 Bacteria 3666
35 Ga0081539_10001630 3300005985 Bacteria 36632
36 Ga0070717_10014727 3300006028 Bacteria 6016
37 Ga0070717_10081519 3300006028 Bacteria 2716
38 Ga0070717_10100513 3300006028 Bacteria 2455
39 Ga0070712_100032488 3300006175 Bacteria 3525
40 Ga0075428_100005689 3300006844 Bacteria 13858
41 Ga0075428_100129086 3300006844 Bacteria 2750
42 Ga0075431_100037755 3300006847 Bacteria 4973
43 Ga0075431_100064065 3300006847 Bacteria 3795
44 Ga0075431_100073972 3300006847 Bacteria 3516
45 Ga0075433_10003637 3300006852 Bacteria 11914
46 Ga0075433_10014117 3300006852 Bacteria 6514
47 Ga0075433_10072292 3300006852 Bacteria 3032
48 Ga0075434_100004254 3300006871 Bacteria 12836
49 Ga0075434_100044825 3300006871 Bacteria 4387
50 Ga0075429_100095537 3300006880 Bacteria 2592
51 Ga0075436_100025945 3300006914 Bacteria 4034
52 Ga0075435_100013202 3300007076 Bacteria 6138
53 Ga0105240_10013302 3300009093 Bacteria 11311
54 Ga0105245_10026953 3300009098 Bacteria 5060
55 Ga0114129_10007212 3300009147 Bacteria 15822
56 Ga0114129_10158836 3300009147 Bacteria 3090
57 Ga0105243_10057154 3300009148 Bacteria 3105
58 Ga0105242_10147659 3300009176 Bacteria 2047
59 Ga0105249_10026371 3300009553 Bacteria 5236
60 Ga0105239_10229760 3300010375 Bacteria 2081
61 Ga0105246_10013305 3300011119 Bacteria 5157
62 Ga0157369_10018405 3300013105 Bacteria 7833
63 Ga0157369_10021734 3300013105 Bacteria 7176
64 Ga0182008_10021360 3300014497 Bacteria 3323
65 Ga0157377_10002550 3300014745 Bacteria 8078
66 Ga0206356_10626909 3300020070 Bacteria 2106
67 Ga0206353_10406539 3300020082 Bacteria 2066
68 Ga0213875_10024015 3300021388 Unclassified 2909
69 Ga0213871_10001730 3300021441 Bacteria 3784
70 Ga0207688_10003080 3300025901 Bacteria 9098
71 Ga0207705_10101773 3300025909 Bacteria 2114
72 Ga0207707_10019806 3300025912 Bacteria 5874
73 Ga0207695_10038613 3300025913 Bacteria 5138
74 Ga0207695_10065397 3300025913 Bacteria 3739
75 Ga0207693_10001411 3300025915 Bacteria 21313
76 Ga0207693_10094128 3300025915 Bacteria 2348
77 Ga0207660_10024191 3300025917 Bacteria 4109
78 Ga0207657_10065026 3300025919 Bacteria 3111
79 Ga0207652_10000728 3300025921 Bacteria 31895
80 Ga0207646_10002694 3300025922 Bacteria 20827
81 Ga0207646_10025242 3300025922 Bacteria 5438
82 Ga0207687_10046854 3300025927 Bacteria 2995
83 Ga0207700_10072183 3300025928 Bacteria 2661
84 Ga0207664_10000933 3300025929 Bacteria 19646
85 Ga0207664_10159333 3300025929 Bacteria 1924
86 Ga0207661_10001537 3300025944 Bacteria 15684
87 Ga0207661_10070746 3300025944 Bacteria 2849
88 Ga0207661_10074880 3300025944 Bacteria 2776
89 Ga0207708_10046282 3300026075 Bacteria 3313
90 Ga0207702_10030415 3300026078 Bacteria 4500
91 Ga0207641_10070345 3300026088 Bacteria 3007
92 Ga0207683_10100880 3300026121 Bacteria 2577
93 Ga0207428_10009554 3300027907 Bacteria 8690
94 Ga0268266_10162622 3300028379 Bacteria 2021
95 Ga0265338_10025290 3300028800 Bacteria 6030
96 Ga0265338_10096361 3300028800 Bacteria 2427
97 Ga0265327_10032347 3300031251 Bacteria 2928
98 Ga0265327_10052330 3300031251 Bacteria 2127
99 Ga0265314_10039917 3300031711 Bacteria 3375
100 Ga0316576_10020279 3300031727 Bacteria 4571
101 Ga0373934_0027472 3300035086 Bacteria 2212
102 Ga0373934_0028877 3300035086 Bacteria 2164
103 Ga0373943_0000172 3300035170 Bacteria 25393
104 Ga0373943_0003309 3300035170 Bacteria 7322
105 Ga0373927_0022446 3300035695 Bacteria 4135
106 Ga0373947_0002649 3300035725 Bacteria 10752
107 Ga0373947_0036930 3300035725 Bacteria 2897
108 Ga0373937_0001601 3300036401 Bacteria 19014
109 Ga0373925_0004376 3300037068 Bacteria 10676
110 Ga0395899_0000865 3300037312 Bacteria 28839
111 Ga0395899_0011461 3300037312 Bacteria 6786
112 Ga0395899_0038308 3300037312 Bacteria 3591
113 Ga0395900_0010886 3300037418 Bacteria 9300
114 Ga0395900_0017962 3300037418 Bacteria 7220
115 Ga0395900_0044097 3300037418 Bacteria 4597
116 Ga0395900_0049505 3300037418 Bacteria 4330
117 Ga0395900_0124580 3300037418 Bacteria 2643
118 Ga0395900_0240411 3300037418 Bacteria 1817
119 Ga0395898_0004064 3300037466 Bacteria 16069
120 Ga0395898_0365659 3300037466 Bacteria 1375
121 Ga0395905_0015596 3300037471 Bacteria 7219
122 Ga0436364_0132928 3300037853 Bacteria 7773
123 Ga0395901_0017823 3300038443 Bacteria 7247
124 Ga0395901_0024067 3300038443 Bacteria 6247
125 Ga0395901_0066941 3300038443 Bacteria 3741
126 Ga0395901_0088439 3300038443 Bacteria 3240
127 Ga0395901_0332848 3300038443 Bacteria 1569
128 Ga0450920_015632 3300042122 Bacteria 1444
129 Ga0450905_008951 3300042142 Bacteria 1374
130 Ga0466969_0000319 3300044656 Bacteria 26543
131 Ga0466972_0043230 3300044658 Bacteria 2189
132 Ga0466961_0055488 3300044693 Bacteria 2525
133 Ga0466963_0000295 3300044694 Bacteria 22402
134 Ga0466963_0008815 3300044694 Bacteria 6057
135 Ga0466963_0012734 3300044694 Bacteria 5151
136 Ga0466963_0013300 3300044694 Bacteria 5051
137 Ga0466963_0020815 3300044694 Bacteria 4129
138 Ga0466963_0089453 3300044694 Bacteria 2094
139 Ga0466963_0111350 3300044694 Bacteria 1879
140 Ga0466964_0005392 3300044706 Bacteria 4750
141 Ga0466971_0001294 3300044719 Bacteria 10448
142 Ga0466971_0001412 3300044719 Bacteria 10082
143 Ga0466971_0032240 3300044719 Bacteria 2347
144 Ga0466968_0003894 3300044735 Bacteria 5538
145 Ga0466970_0012764 3300044765 Bacteria 4299
146 Ga0466957_0004115 3300044842 Bacteria 8059
147 Ga0466957_0007137 3300044842 Bacteria 6318
148 Ga0466957_0012979 3300044842 Bacteria 4826
149 Ga0466957_0016236 3300044842 Bacteria 4354
150 Ga0466957_0021235 3300044842 Bacteria 3824
151 Ga0466957_0034231 3300044842 Bacteria 3048
152 Ga0466957_0083588 3300044842 Bacteria 1992
153 Ga0466960_0001446 3300044901 Bacteria 8660
154 Ga0466959_0008422 3300045049 Bacteria 7291
155 Ga0466959_0022268 3300045049 Bacteria 4682
156 Ga0466959_0022688 3300045049 Bacteria 4640
157 Ga0466959_0053014 3300045049 Bacteria 2967
158 Ga0451576_0130887 3300045051 Bacteria 2615
159 Ga0466958_0000679 3300045836 Bacteria 14766
160 Ga0466958_0002283 3300045836 Bacteria 9556
161 Ga0466958_0002732 3300045836 Bacteria 8950
162 Ga0466958_0003497 3300045836 Bacteria 8157
163 Ga0466958_0004976 3300045836 Bacteria 7089
164 Ga0466958_0011409 3300045836 Bacteria 5004
165 Ga0466958_0049555 3300045836 Bacteria 2541
166 Ga0466967_0000193 3300045976 Bacteria 25500
167 Ga0466967_0015304 3300045976 Bacteria 6009
168 Ga0466967_0015493 3300045976 Bacteria 5976
169 Ga0466967_0018848 3300045976 Bacteria 5531
170 Ga0466967_0019065 3300045976 Bacteria 5506
171 Ga0466967_0049818 3300045976 Bacteria 3665
172 Ga0466967_0073105 3300045976 Bacteria 3075
173 Ga0495592_0000075 3300046454 Bacteria 88214
174 Ga0495592_0017178 3300046454 Bacteria 5494
175 Ga0495603_0077440 3300046455 Bacteria 1951
176 Ga0495629_0001412 3300046459 Bacteria 18944
177 Ga0495629_0058440 3300046459 Bacteria 2696
178 Ga0495641_0000472 3300046461 Bacteria 33428
179 Ga0495651_0000344 3300046462 Bacteria 35980
180 Ga0495651_0006891 3300046462 Bacteria 8683
181 Ga0495651_0052439 3300046462 Bacteria 3142
182 Ga0495653_0143639 3300046463 Bacteria 1675
183 Ga0495582_0000188 3300046473 Bacteria 33908
184 Ga0495582_0004759 3300046473 Bacteria 7631
185 Ga0495582_0092951 3300046473 Bacteria 1683
186 Ga0495639_0001640 3300046475 Bacteria 9968
187 Ga0495662_0003293 3300046476 Bacteria 8175
188 Ga0495662_0008577 3300046476 Bacteria 5021
189 Ga0495664_0036544 3300046477 Bacteria 2895
190 Ga0495664_0107197 3300046477 Bacteria 1685
191 Ga0495607_0087225 3300046501 Bacteria 1699
192 Ga0495608_0008932 3300046511 Bacteria 7007
193 Ga0495618_0030981 3300046514 Bacteria 3343
194 Ga0495618_0111997 3300046514 Bacteria 1747
195 Ga0495628_0000329 3300046516 Bacteria 42884
196 Ga0495630_0060126 3300046517 Bacteria 2851
197 Ga0495644_0004898 3300046523 Bacteria 5256
198 Ga0495666_0062692 3300046526 Bacteria 1775
199 Ga0495652_0000111 3300046529 Bacteria 87928
200 Ga0495665_0001483 3300046531 Bacteria 12571
201 Ga0495665_0003151 3300046531 Bacteria 8925
202 Ga0495640_0006986 3300046533 Bacteria 8888
203 Ga0495640_0020688 3300046533 Bacteria 4840
204 Ga0495586_0011669 3300046535 Bacteria 4673
205 Ga0495587_0000100 3300046536 Bacteria 67315
206 Ga0495587_0014719 3300046536 Bacteria 4900
207 Ga0495587_0029315 3300046536 Bacteria 3341
208 Ga0495645_0000563 3300046543 Bacteria 25436
209 Ga0495667_0048297 3300046559 Bacteria 2810
210 Ga0495634_0025685 3300046642 Bacteria 4115
211 Ga0495634_0035474 3300046642 Bacteria 3415
212 Ga0495635_0022623 3300046663 Bacteria 4380
213 Ga0495635_0044565 3300046663 Bacteria 3060
214 Ga0495599_0000086 3300046678 Bacteria 64425
215 Ga0495599_0042054 3300046678 Bacteria 2868
216 Ga0495599_0048132 3300046678 Bacteria 2672
217 Ga0495623_0000037 3300046679 Bacteria 80938
218 Ga0495646_0037648 3300046680 Bacteria 2990
219 Ga0495647_0002075 3300046681 Bacteria 6271
220 Ga0495647_0007418 3300046681 Bacteria 3673
221 Ga0495658_0000431 3300046683 Bacteria 23437
222 Ga0495658_0027195 3300046683 Bacteria 3074
223 Ga0495658_0043479 3300046683 Bacteria 2513
224 Ga0495613_0001931 3300046689 Bacteria 15728
225 Ga0495613_0009352 3300046689 Bacteria 7270
226 Ga0495613_0030504 3300046689 Bacteria 4005
227 Ga0495613_0043131 3300046689 Bacteria 3337
228 Ga0495624_0006161 3300046690 Bacteria 8537
229 Ga0495624_0055493 3300046690 Bacteria 2495
230 Ga0495624_0057570 3300046690 Bacteria 2443
231 Ga0495600_0032330 3300046809 Bacteria 3394
232 Ga0495581_0014528 3300047315 Bacteria 4566
233 Ga0495581_0016563 3300047315 Bacteria 4283
234 Ga0495604_0000080 3300047317 Bacteria 83113
235 Ga0495674_0044639 3300047319 Bacteria 3939
236 Ga0495674_0052387 3300047319 Bacteria 3591
237 Ga0495674_0059290 3300047319 Bacteria 3343
238 Ga0495676_0000548 3300047321 Bacteria 30843
239 Ga0495676_0047519 3300047321 Bacteria 3469
240 Ga0495676_0110523 3300047321 Bacteria 2017
241 Ga0495680_0048878 3300047322 Bacteria 3318
242 Ga0495680_0061692 3300047322 Bacteria 2883
243 Ga0495680_0063253 3300047322 Bacteria 2842
244 Ga0495680_0073390 3300047322 Bacteria 2600
245 Ga0495675_0000060 3300047444 Bacteria 76099
246 Ga0495684_0018113 3300047471 Bacteria 5428
247 Ga0495684_0020828 3300047471 Bacteria 5053
248 Ga0495684_0020999 3300047471 Bacteria 5029
249 Ga0495684_0078204 3300047471 Bacteria 2510
250 Ga0495593_0009451 3300047673 Bacteria 5657
251 Ga0495593_0060629 3300047673 Bacteria 1981
252 Ga0495602_0000075 3300048088 Bacteria 95851
253 Ga0495602_0059068 3300048088 Bacteria 3351
254 Ga0495614_0020848 3300048089 Bacteria 2832
255 Ga0495614_0027184 3300048089 Bacteria 2467
256 Ga0495614_0053350 3300048089 Bacteria 1734
257 Ga0496100_0050915 3300048903 Bacteria 2686
258 Ga0496100_0185249 3300048903 Bacteria 1508
259 Ga0496101_0004063 3300048904 Bacteria 9148
260 Ga0496101_0023577 3300048904 Bacteria 4253
261 Ga0496101_0079192 3300048904 Bacteria 2425
262 Ga0496101_0098771 3300048904 Bacteria 2182
263 Ga0496102_0150717 3300048905 Bacteria 2185
264 Ga0496103_0014346 3300048906 Bacteria 4706
265 Ga0496103_0063865 3300048906 Bacteria 2294
266 Ga0496103_0102758 3300048906 Bacteria 1810
267 Ga0496104_0003256 3300048907 Bacteria 14003
268 Ga0496104_0006707 3300048907 Bacteria 10133
269 Ga0496104_0052441 3300048907 Bacteria 3853
270 Ga0496104_0059175 3300048907 Bacteria 3627
271 Ga0496104_0101416 3300048907 Bacteria 2756
272 Ga0496104_0213910 3300048907 Bacteria 1839
273 Ga0496105_0000255 3300048908 Bacteria 35883
274 Ga0496105_0019515 3300048908 Bacteria 5468
275 Ga0496105_0050380 3300048908 Bacteria 3439
276 Ga0496105_0055456 3300048908 Bacteria 3272
277 Ga0496105_0117821 3300048908 Bacteria 2190
278 Ga0496105_0159462 3300048908 Bacteria 1852
279 Ga0496106_0048861 3300048909 Bacteria 3187
280 Ga0496107_0085956 3300048910 Bacteria 2295
281 Ga0496108_0004578 3300048911 Bacteria 11142
282 Ga0496108_0012410 3300048911 Bacteria 6933
283 Ga0496108_0045427 3300048911 Bacteria 3669
284 Ga0496109_0004966 3300048912 Bacteria 11109
285 Ga0496109_0004996 3300048912 Bacteria 11073
286 Ga0496109_0042441 3300048912 Bacteria 4120
287 Ga0496109_0199930 3300048912 Bacteria 1879
288 Ga0496110_0009955 3300048913 Bacteria 7710
289 Ga0496110_0015228 3300048913 Bacteria 6397
290 Ga0496110_0040052 3300048913 Bacteria 4082
291 Ga0496111_0000034 3300048914 Bacteria 54519
292 Ga0496111_0011270 3300048914 Bacteria 6018
293 Ga0496111_0154988 3300048914 Bacteria 1700
294 Ga0496112_0008806 3300048915 Bacteria 9057
295 Ga0496112_0026462 3300048915 Bacteria 5582
296 Ga0496112_0037966 3300048915 Bacteria 4703
297 Ga0496113_0002150 3300048916 Bacteria 11372
298 Ga0496113_0077291 3300048916 Bacteria 2545
299 Ga0496114_0000923 3300048917 Bacteria 21968
300 Ga0496114_0005682 3300048917 Bacteria 9783
301 Ga0496114_0009096 3300048917 Bacteria 7875
302 Ga0496114_0023090 3300048917 Bacteria 5071
303 Ga0496114_0026094 3300048917 Bacteria 4781
304 Ga0496115_0002663 3300048918 Bacteria 12821
305 Ga0496115_0015544 3300048918 Bacteria 5776
306 Ga0496115_0061343 3300048918 Bacteria 3031
307 Ga0496115_0086015 3300048918 Bacteria 2565
308 Ga0501036_0052502 3300049572 Bacteria 3452
309 Ga0501038_0024941 3300049574 Bacteria 5331
310 Ga0501039_0138416 3300049575 Bacteria 1912
311 Ga0501040_0010614 3300049576 Bacteria 6024
312 Ga0501040_0029081 3300049576 Bacteria 3729
313 Ga0501046_0089705 3300049580 Bacteria 2366
314 Ga0501046_0126864 3300049580 Bacteria 1938
315 Ga0501047_0178546 3300049581 Bacteria 1990
316 Ga0501048_0006390 3300049582 Bacteria 8960
317 Ga0501070_0124140 3300049586 Bacteria 2134
318 Ga0501071_0129647 3300049587 Bacteria 1873
319 Ga0501071_0240668 3300049587 Bacteria 1364
320 Ga0501076_0120139 3300049592 Bacteria 2128
321 Ga0501077_0008414 3300049593 Bacteria 6389
322 Ga0501077_0012424 3300049593 Bacteria 5332
323 Ga0501081_0224053 3300049743 Bacteria 1368
324 Ga0501083_0065702 3300049744 Bacteria 2416
325 Ga0501045_0088545 3300049824 Bacteria 2287
326 nmdc:mga05p37_198062_c1 3300050507 Bacteria 2435
327 nmdc:mga05p37_2220_c1 3300050507 Bacteria 19240
328 nmdc:mga0qj67_14705_c1 3300050509 Bacteria 5917
329 nmdc:mga06r32_107061_c1 3300050510 Bacteria 2747
330 nmdc:mga06r32_53918_c1 3300050510 Bacteria 3854
331 nmdc:mga08y16_142624_c1 3300050511 Bacteria 2490
332 nmdc:mga08y16_204071_c1 3300050511 Bacteria 2048
333 nmdc:mga0n895_109566_c1 3300050512 Bacteria 2777
334 nmdc:mga0n895_98424_c1 3300050512 Bacteria 2932
335 nmdc:mga0rr50_74351_c1 3300050513 Bacteria 2601
336 nmdc:mga0a205_131288_c1 3300050515 Bacteria 2405
337 Ga0495601_0001281 3300053077 Bacteria 13790
338 Ga0495601_0022630 3300053077 Bacteria 3860
339 Ga0495601_0025510 3300053077 Bacteria 3645
340 Ga0495601_0045852 3300053077 Bacteria 2750
341 Ga0495612_0012720 3300053078 Bacteria 3392
342 Ga0495595_0021671 3300053084 Bacteria 2810
343 Ga0495595_0050023 3300053084 Bacteria 1934
344 Ga0495619_0004489 3300053085 Bacteria 8912
345 Ga0495619_0013220 3300053085 Bacteria 5202
346 Ga0495619_0058042 3300053085 Bacteria 2568
347 Ga0495619_0060872 3300053085 Bacteria 2510
348 Ga0495619_0100896 3300053085 Bacteria 1964
349 Ga0501082_0038539 3300060353 Bacteria 4124
350 Ga0466962_0004498 3300061719 Bacteria 6682
351 Ga0466962_0015463 3300061719 Bacteria 3679
352 Ga0466962_0036786 3300061719 Bacteria 2343
353 Ga0530510_0019914 3300061734 Bacteria 4768
354 Ga0070698_100144089
355 Ga0070658_10014128
356 Ga0070683_100001450
357 Ga0070683_100026877
358 Ga0070683_100042723
359 Ga0070683_100075842
360 Ga0070682_100054477
361 Ga0070703_10002984
362 Ga0070709_10054442
363 Ga0070714_100014006
364 Ga0070714_100049302
365 Ga0070714_100056204
366 Ga0070713_100082793
367 Ga0070678_100002896
368 Ga0070681_10179066
369 Ga0070685_10026285
370 Ga0070707_100005965
371 Ga0070707_100018735
372 Ga0070698_100125348
373 Ga0070698_100196657
374 Ga0070698_100260135
375 Ga0070679_100008243
376 Ga0070684_100000376
377 Ga0070684_100029214
378 Ga0070686_100016535
379 Ga0070695_100000001
380 Ga0068856_100012870
381 Ga0068856_100058979
382 Ga0081455_10006338
383 Ga0081455_10006824
384 Ga0081455_10128818
385 Ga0081538_10000151
386 Ga0081538_10003411
387 Ga0081538_10030421
388 Ga0081539_10001630
389 Ga0070717_10014727
390 Ga0070717_10081519
391 Ga0070717_10100513
392 Ga0070712_100032488
393 Ga0075428_100005689
394 Ga0075428_100129086
395 Ga0075431_100037755
396 Ga0075431_100064065
397 Ga0075431_100073972
398 Ga0075433_10003637
399 Ga0075433_10014117
400 Ga0075433_10072292
401 Ga0075434_100004254
402 Ga0075434_100044825
403 Ga0075429_100095537
404 Ga0075436_100025945
405 Ga0075435_100013202
406 Ga0105240_10013302
407 Ga0105245_10026953
408 Ga0114129_10007212
409 Ga0114129_10158836
410 Ga0105243_10057154
411 Ga0105242_10147659
412 Ga0105249_10026371
413 Ga0105239_10229760
414 Ga0105246_10013305
415 Ga0157369_10018405
416 Ga0157369_10021734
417 Ga0182008_10021360
418 Ga0157377_10002550
419 Ga0206356_10626909
420 Ga0206353_10406539
421 Ga0213875_10024015
422 Ga0213871_10001730
423 Ga0207688_10003080
424 Ga0207705_10101773
425 Ga0207707_10019806
426 Ga0207695_10038613
427 Ga0207695_10065397
428 Ga0207693_10001411
429 Ga0207693_10094128
430 Ga0207660_10024191
431 Ga0207657_10065026
432 Ga0207652_10000728
433 Ga0207646_10002694
434 Ga0207646_10025242
435 Ga0207687_10046854
436 Ga0207700_10072183
437 Ga0207664_10000933
438 Ga0207664_10159333
439 Ga0207661_10001537
440 Ga0207661_10070746
441 Ga0207661_10074880
442 Ga0207708_10046282
443 Ga0207702_10030415
444 Ga0207641_10070345
445 Ga0207683_10100880
446 Ga0207428_10009554
447 Ga0268266_10162622
448 Ga0265338_10025290
449 Ga0265338_10096361
450 Ga0265327_10032347
451 Ga0265327_10052330
452 Ga0265314_10039917
453 Ga0316576_10020279
454 Ga0373934_0027472
455 Ga0373934_0028877
456 Ga0373943_0000172
457 Ga0373943_0003309
458 Ga0373927_0022446
459 Ga0373947_0002649
460 Ga0373947_0036930
461 Ga0373937_0001601
462 Ga0373925_0004376
463 Ga0395899_0000865
464 Ga0395899_0011461
465 Ga0395899_0038308
466 Ga0395900_0010886
467 Ga0395900_0017962
468 Ga0395900_0044097
469 Ga0395900_0049505
470 Ga0395900_0124580
471 Ga0395900_0240411
472 Ga0395898_0004064
473 Ga0395898_0365659
474 Ga0395905_0015596
475 Ga0436364_0132928
476 Ga0395901_0017823
477 Ga0395901_0024067
478 Ga0395901_0066941
479 Ga0395901_0088439
480 Ga0395901_0332848
481 Ga0450920_015632
482 Ga0450905_008951
483 Ga0466969_0000319
484 Ga0466972_0043230
485 Ga0466961_0055488
486 Ga0466963_0000295
487 Ga0466963_0008815
488 Ga0466963_0012734
489 Ga0466963_0013300
490 Ga0466963_0020815
491 Ga0466963_0089453
492 Ga0466963_0111350
493 Ga0466964_0005392
494 Ga0466971_0001294
495 Ga0466971_0001412
496 Ga0466971_0032240
497 Ga0466968_0003894
498 Ga0466970_0012764
499 Ga0466957_0004115
500 Ga0466957_0007137
501 Ga0466957_0012979
502 Ga0466957_0016236
503 Ga0466957_0021235
504 Ga0466957_0034231
505 Ga0466957_0083588
506 Ga0466960_0001446
507 Ga0466959_0008422
508 Ga0466959_0022268
509 Ga0466959_0022688
510 Ga0466959_0053014
511 Ga0451576_0130887
512 Ga0466958_0000679
513 Ga0466958_0002283
514 Ga0466958_0002732
515 Ga0466958_0003497
516 Ga0466958_0004976
517 Ga0466958_0011409
518 Ga0466958_0049555
519 Ga0466967_0000193
520 Ga0466967_0015304
521 Ga0466967_0015493
522 Ga0466967_0018848
523 Ga0466967_0019065
524 Ga0466967_0049818
525 Ga0466967_0073105
526 Ga0495592_0000075
527 Ga0495592_0017178
528 Ga0495603_0077440
529 Ga0495629_0001412
530 Ga0495629_0058440
531 Ga0495641_0000472
532 Ga0495651_0000344
533 Ga0495651_0006891
534 Ga0495651_0052439
535 Ga0495653_0143639
536 Ga0495582_0000188
537 Ga0495582_0004759
538 Ga0495582_0092951
539 Ga0495639_0001640
540 Ga0495662_0003293
541 Ga0495662_0008577
542 Ga0495664_0036544
543 Ga0495664_0107197
544 Ga0495607_0087225
545 Ga0495608_0008932
546 Ga0495618_0030981
547 Ga0495618_0111997
548 Ga0495628_0000329
549 Ga0495630_0060126
550 Ga0495644_0004898
551 Ga0495666_0062692
552 Ga0495652_0000111
553 Ga0495665_0001483
554 Ga0495665_0003151
555 Ga0495640_0006986
556 Ga0495640_0020688
557 Ga0495586_0011669
558 Ga0495587_0000100
559 Ga0495587_0014719
560 Ga0495587_0029315
561 Ga0495645_0000563
562 Ga0495667_0048297
563 Ga0495634_0025685
564 Ga0495634_0035474
565 Ga0495635_0022623
566 Ga0495635_0044565
567 Ga0495599_0000086
568 Ga0495599_0042054
569 Ga0495599_0048132
570 Ga0495623_0000037
571 Ga0495646_0037648
572 Ga0495647_0002075
573 Ga0495647_0007418
574 Ga0495658_0000431
575 Ga0495658_0027195
576 Ga0495658_0043479
577 Ga0495613_0001931
578 Ga0495613_0009352
579 Ga0495613_0030504
580 Ga0495613_0043131
581 Ga0495624_0006161
582 Ga0495624_0055493
583 Ga0495624_0057570
584 Ga0495600_0032330
585 Ga0495581_0014528
586 Ga0495581_0016563
587 Ga0495604_0000080
588 Ga0495674_0044639
589 Ga0495674_0052387
590 Ga0495674_0059290
591 Ga0495676_0000548
592 Ga0495676_0047519
593 Ga0495676_0110523
594 Ga0495680_0048878
595 Ga0495680_0061692
596 Ga0495680_0063253
597 Ga0495680_0073390
598 Ga0495675_0000060
599 Ga0495684_0018113
600 Ga0495684_0020828
601 Ga0495684_0020999
602 Ga0495684_0078204
603 Ga0495593_0009451
604 Ga0495593_0060629
605 Ga0495602_0000075
606 Ga0495602_0059068
607 Ga0495614_0020848
608 Ga0495614_0027184
609 Ga0495614_0053350
610 Ga0496100_0050915
611 Ga0496100_0185249
612 Ga0496101_0004063
613 Ga0496101_0023577
614 Ga0496101_0079192
615 Ga0496101_0098771
616 Ga0496102_0150717
617 Ga0496103_0014346
618 Ga0496103_0063865
619 Ga0496103_0102758
620 Ga0496104_0003256
621 Ga0496104_0006707
622 Ga0496104_0052441
623 Ga0496104_0059175
624 Ga0496104_0101416
625 Ga0496104_0213910
626 Ga0496105_0000255
627 Ga0496105_0019515
628 Ga0496105_0050380
629 Ga0496105_0055456
630 Ga0496105_0117821
631 Ga0496105_0159462
632 Ga0496106_0048861
633 Ga0496107_0085956
634 Ga0496108_0004578
635 Ga0496108_0012410
636 Ga0496108_0045427
637 Ga0496109_0004966
638 Ga0496109_0004996
639 Ga0496109_0042441
640 Ga0496109_0199930
641 Ga0496110_0009955
642 Ga0496110_0015228
643 Ga0496110_0040052
644 Ga0496111_0000034
645 Ga0496111_0011270
646 Ga0496111_0154988
647 Ga0496112_0008806
648 Ga0496112_0026462
649 Ga0496112_0037966
650 Ga0496113_0002150
651 Ga0496113_0077291
652 Ga0496114_0000923
653 Ga0496114_0005682
654 Ga0496114_0009096
655 Ga0496114_0023090
656 Ga0496114_0026094
657 Ga0496115_0002663
658 Ga0496115_0015544
659 Ga0496115_0061343
660 Ga0496115_0086015
661 Ga0501036_0052502
662 Ga0501038_0024941
663 Ga0501039_0138416
664 Ga0501040_0010614
665 Ga0501040_0029081
666 Ga0501046_0089705
667 Ga0501046_0126864
668 Ga0501047_0178546
669 Ga0501048_0006390
670 Ga0501070_0124140
671 Ga0501071_0129647
672 Ga0501071_0240668
673 Ga0501076_0120139
674 Ga0501077_0008414
675 Ga0501077_0012424
676 Ga0501081_0224053
677 Ga0501083_0065702
678 Ga0501045_0088545
679 nmdc:mga05p37_198062_c1
680 nmdc:mga05p37_2220_c1
681 nmdc:mga0qj67_14705_c1
682 nmdc:mga06r32_107061_c1
683 nmdc:mga06r32_53918_c1
684 nmdc:mga08y16_142624_c1
685 nmdc:mga08y16_204071_c1
686 nmdc:mga0n895_109566_c1
687 nmdc:mga0n895_98424_c1
688 nmdc:mga0rr50_74351_c1
689 nmdc:mga0a205_131288_c1
690 Ga0495601_0001281
691 Ga0495601_0022630
692 Ga0495601_0025510
693 Ga0495601_0045852
694 Ga0495612_0012720
695 Ga0495595_0021671
696 Ga0495595_0050023
697 Ga0495619_0004489
698 Ga0495619_0013220
699 Ga0495619_0058042
700 Ga0495619_0060872
701 Ga0495619_0100896
702 Ga0501082_0038539
703 Ga0466962_0004498
704 Ga0466962_0015463
705 Ga0466962_0036786
706 Ga0530510_0019914

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20696

UbiD_C

3-octaprenyl-4-hydroxybenzoate carboxy-lyase C-terminal domain

333

456

0.98

PF01977

UbiD

3-octaprenyl-4-hydroxybenzoate carboxy-lyase Rift-related domain

130

328

0.94

PF20695

UbiD_N

3-octaprenyl-4-hydroxybenzoate carboxy-lyase N-terminal domain

23

101

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5m1d-assembly1.cif.gz_C crystal structure of n-terminally tagged ubid from e. coli reconstituted with prfmn cofactor 0.8697 5 478
5m1d-assembly1.cif.gz_C crystal structure of n-terminally tagged ubid from e. coli reconstituted with prfmn cofactor 0.8661 5 478
2idb-assembly1.cif.gz_C-2 crystal structure of 3-octaprenyl-4-hydroxybenzoate decarboxylase (ubid) from escherichia coli, northeast structural genomics target er459. 0.8651 3 478
5m1b-assembly1.cif.gz_B crystal structure of c-terminally tagged apo-ubid from e. coli 0.8619 3 477
2idb-assembly1.cif.gz_C-2 crystal structure of 3-octaprenyl-4-hydroxybenzoate decarboxylase (ubid) from escherichia coli, northeast structural genomics target er459. 0.8615 3 478
ID Description Score Start End Superfamily
af_Q03034_1_339_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8494 5 330 2.30.110.10
2idbB02 Alpha Beta;3-Layer(aba) Sandwich;UbiD C-terminal domain-like;UbiD C-terminal domain-like 0.8454 329 443 3.40.1670.10
2idbB02 Alpha Beta;3-Layer(aba) Sandwich;UbiD C-terminal domain-like;UbiD C-terminal domain-like 0.8321 329 443 3.40.1670.10
af_Q58533_290_403_3.40.1670.10 Alpha Beta;3-Layer(aba) Sandwich;UbiD C-terminal domain-like;UbiD C-terminal domain-like 0.8295 333 443 3.40.1670.10
af_Q03034_1_339_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8162 5 330 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A832JFD7-F1-model_v4 UbiD family decarboxylase 0.9628 1 318 GO:0005829
GO:0006744
GO:0008694
AF-A0A381T733-F1-model_v4 UbiD family decarboxylase 0.958 1 285 GO:0005829
GO:0006744
GO:0008694
AF-A0A354AWR2-F1-model_v4 UbiD family decarboxylase 0.9579 4 309 GO:0005829
GO:0006744
GO:0008694
AF-A0A6B1AQR9-F1-model_v4 UbiD family decarboxylase 0.9563 1 299 GO:0005829
GO:0006744
GO:0008694
AF-A0A2W4J8Y8-F1-model_v4 Menaquinone biosynthesis decarboxylase 0.9515 2 187 GO:0005829
GO:0006744
GO:0008694

Map