F418216

General Info

Members Datasets Scaffolds Average Seq Length
350 161 700 454

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10178504|Ga0105240_101785042
Length 510
Sequence MNVSIIGTGYVGLTTGACLAFLGHKVTCIDADERKVKALQAGKIPFYEPHLPELVAGARHNLSFTTEYKESIPQSQVIFIAVGTPPGQNGAPDLKYLEAAARGIGEYLAGDFVVVVNKSTVPIGSGNWVESIVRDAYEKRTNSKAKGVFAVASNPEFLREGSAIFDSLYPDRVVVGSDNQRTAEVLYSLYRPLLEQTFTAPSYLPRPDRMGAVPLISADLASAELIKYAANAFLALKISYINEIGQLAEKVGADITQVAKGIGLDARIGTRFLQAGIGWGGSCFGKDTAALVATASEYGLDAQIVKAAREMNRRQRERVVEKLLDELKILKGRTVALLGLAFKPDTDDLREAPALDIARKLIERGARVKAHDPVAMSRFLQEHPDLDVTLCASAAEAAQDADAIVLVTEWQEYRDLDWESIKNTMRGQIVLDGRNLLDRARLARAGYRYLSLALPGSTIKVRACSEPSPLPARRRSPHRHPRTGTRTLARPPERTSLPTRRSPAQFQRRP

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
58 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
100 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
101 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
102 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
103 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
104 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
105 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
106 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
111 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
112 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
113 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
114 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
115 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
116 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
121 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
122 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
129 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
130 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
131 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
132 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
135 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
136 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
137 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
138 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
139 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
140 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
141 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
142 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
156 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
160 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
161 2857604169 Domibacillus sp. R-71921 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.14
Metatranscriptomes 0
Isolates 0.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.57
Nodule 0
Rhizoplane 0.86
Rhizosphere 92.57
Stem 0
Stem Tuber 0
Unclassified 2.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10178504 3300009093 Bacteria 2508
2 JGI25406J46586_10023703 3300003203 Bacteria 2422
3 Ga0070658_10009958 3300005327 Bacteria 7635
4 Ga0070658_10096560 3300005327 Bacteria 2440
5 Ga0070683_100157451 3300005329 Bacteria 2154
6 Ga0070690_100147691 3300005330 Bacteria 1601
7 Ga0070680_100001558 3300005336 Bacteria 16748
8 Ga0070680_100059103 3300005336 Bacteria 3136
9 Ga0068868_100001532 3300005338 Bacteria 15839
10 Ga0068868_100064828 3300005338 Bacteria 2901
11 Ga0070660_100039560 3300005339 Bacteria 3585
12 Ga0070660_100050503 3300005339 Bacteria 3200
13 Ga0070661_100084545 3300005344 Bacteria 2344
14 Ga0070671_100167631 3300005355 Bacteria 1857
15 Ga0070709_10172066 3300005434 Bacteria 1514
16 Ga0070714_100046647 3300005435 Bacteria 3677
17 Ga0070711_100010814 3300005439 Bacteria 5658
18 Ga0070681_10002648 3300005458 Bacteria 16442
19 Ga0070681_10007642 3300005458 Bacteria 10573
20 Ga0070681_10025939 3300005458 Bacteria 5892
21 Ga0070681_10037392 3300005458 Bacteria 4872
22 Ga0070679_100000878 3300005530 Bacteria 26099
23 Ga0070679_100007857 3300005530 Bacteria 10002
24 Ga0070679_100034819 3300005530 Bacteria 4993
25 Ga0070679_100125891 3300005530 Bacteria 2544
26 Ga0070679_100176496 3300005530 Bacteria 2109
27 Ga0070684_100009906 3300005535 Bacteria 7531
28 Ga0070695_100099018 3300005545 Bacteria 1960
29 Ga0070696_100005362 3300005546 Bacteria 8554
30 Ga0070693_100027418 3300005547 Bacteria 3087
31 Ga0070665_100219672 3300005548 Bacteria 1901
32 Ga0068855_100007285 3300005563 Bacteria 13408
33 Ga0068855_100008357 3300005563 Bacteria 12518
34 Ga0068855_100026454 3300005563 Bacteria 6940
35 Ga0068855_100044701 3300005563 Bacteria 5241
36 Ga0068855_100086449 3300005563 Bacteria 3626
37 Ga0070664_100037988 3300005564 Bacteria 4051
38 Ga0070664_100200219 3300005564 Bacteria 1782
39 Ga0068857_100000098 3300005577 Bacteria 50740
40 Ga0068857_100002610 3300005577 Bacteria 14790
41 Ga0068857_100004597 3300005577 Bacteria 11691
42 Ga0068856_100000431 3300005614 Bacteria 46002
43 Ga0068856_100024562 3300005614 Bacteria 5868
44 Ga0068856_100038203 3300005614 Bacteria 4713
45 Ga0068856_100039807 3300005614 Bacteria 4615
46 Ga0068856_100050402 3300005614 Bacteria 4104
47 Ga0068856_100103233 3300005614 Bacteria 2845
48 Ga0068856_100241075 3300005614 Bacteria 1823
49 Ga0068852_100008290 3300005616 Bacteria 7647
50 Ga0068852_100017511 3300005616 Bacteria 5623
51 Ga0068864_100008637 3300005618 Bacteria 8405
52 Ga0068863_100020699 3300005841 Bacteria 6283
53 Ga0068863_100109383 3300005841 Bacteria 2631
54 Ga0068863_100130769 3300005841 Bacteria 2397
55 Ga0068858_100029253 3300005842 Bacteria 5115
56 Ga0068858_100031643 3300005842 Bacteria 4915
57 Ga0081455_10065109 3300005937 Bacteria 3050
58 Ga0081538_10015883 3300005981 Bacteria 5804
59 Ga0081538_10061551 3300005981 Bacteria 2148
60 Ga0081539_10001149 3300005985 Bacteria 47950
61 Ga0081539_10009744 3300005985 Bacteria 7948
62 Ga0070717_10024603 3300006028 Unclassified 4784
63 Ga0070717_10027228 3300006028 Bacteria 4568
64 Ga0097621_100011822 3300006237 Bacteria 6450
65 Ga0097621_100041359 3300006237 Bacteria 3710
66 Ga0097621_100107537 3300006237 Bacteria 2354
67 Ga0097621_100145054 3300006237 Bacteria 2032
68 Ga0068871_100039939 3300006358 Bacteria 3757
69 Ga0068871_100055032 3300006358 Bacteria 3229
70 Ga0075431_100037783 3300006847 Bacteria 4972
71 Ga0075431_100062202 3300006847 Bacteria 3852
72 Ga0068865_100078556 3300006881 Bacteria 2361
73 Ga0105240_10000235 3300009093 Bacteria 110217
74 Ga0105240_10001011 3300009093 Bacteria 50192
75 Ga0105240_10003098 3300009093 Bacteria 26153
76 Ga0105240_10246572 3300009093 Bacteria 2068
77 Ga0105245_10000827 3300009098 Bacteria 28177
78 Ga0105245_10002868 3300009098 Bacteria 15482
79 Ga0105245_10003605 3300009098 Bacteria 13814
80 Ga0105245_10008858 3300009098 Bacteria 8779
81 Ga0114129_10216040 3300009147 Bacteria 2589
82 Ga0105243_10162873 3300009148 Bacteria 1925
83 Ga0105241_10003348 3300009174 Bacteria 11936
84 Ga0105241_10004806 3300009174 Bacteria 9952
85 Ga0105241_10009147 3300009174 Bacteria 7291
86 Ga0105241_10010410 3300009174 Bacteria 6824
87 Ga0105242_10003739 3300009176 Bacteria 11821
88 Ga0105242_10006911 3300009176 Bacteria 8753
89 Ga0105242_10048578 3300009176 Bacteria 3449
90 Ga0105242_10053706 3300009176 Bacteria 3291
91 Ga0105242_10071964 3300009176 Bacteria 2871
92 Ga0105248_10010505 3300009177 Bacteria 10196
93 Ga0105248_10031153 3300009177 Bacteria 5961
94 Ga0105248_10033422 3300009177 Bacteria 5746
95 Ga0105248_10037046 3300009177 Bacteria 5455
96 Ga0105248_10211251 3300009177 Bacteria 2187
97 Ga0105237_10001791 3300009545 Bacteria 27763
98 Ga0105237_10014213 3300009545 Bacteria 8334
99 Ga0105237_10017125 3300009545 Bacteria 7516
100 Ga0105237_10029102 3300009545 Bacteria 5619
101 Ga0105237_10059785 3300009545 Bacteria 3813
102 Ga0105237_10066696 3300009545 Bacteria 3593
103 Ga0105237_10182190 3300009545 Bacteria 2100
104 Ga0105237_10221351 3300009545 Bacteria 1893
105 Ga0105238_10001899 3300009551 Bacteria 20977
106 Ga0105238_10004090 3300009551 Bacteria 14469
107 Ga0105238_10009949 3300009551 Bacteria 9538
108 Ga0105238_10025617 3300009551 Bacteria 6012
109 Ga0105238_10057819 3300009551 Bacteria 3888
110 Ga0105238_10058174 3300009551 Bacteria 3875
111 Ga0105249_10002362 3300009553 Bacteria 16384
112 Ga0105249_10136433 3300009553 Bacteria 2348
113 Ga0105239_10003045 3300010375 Bacteria 20838
114 Ga0105239_10008201 3300010375 Bacteria 11919
115 Ga0105239_10030924 3300010375 Bacteria 5890
116 Ga0105239_10230601 3300010375 Bacteria 2077
117 Ga0105246_10158591 3300011119 Bacteria 1721
118 Ga0157371_10076854 3300013102 Bacteria 2364
119 Ga0157370_10009247 3300013104 Bacteria 10561
120 Ga0157370_10012985 3300013104 Bacteria 8607
121 Ga0157370_10023200 3300013104 Bacteria 6164
122 Ga0157369_10001061 3300013105 Bacteria 34642
123 Ga0157369_10001514 3300013105 Bacteria 28521
124 Ga0157369_10009608 3300013105 Bacteria 11060
125 Ga0157369_10017634 3300013105 Bacteria 8024
126 Ga0157369_10188253 3300013105 Bacteria 2169
127 Ga0157374_10008597 3300013296 Bacteria 8735
128 Ga0157374_10234751 3300013296 Bacteria 1802
129 Ga0157378_10087023 3300013297 Bacteria 2833
130 Ga0157372_10008955 3300013307 Bacteria 10636
131 Ga0157372_10025974 3300013307 Bacteria 6370
132 Ga0157372_10028231 3300013307 Bacteria 6124
133 Ga0157372_10063232 3300013307 Bacteria 4149
134 Ga0163163_10000883 3300014325 Bacteria 25514
135 Ga0163163_10074361 3300014325 Bacteria 3390
136 Ga0163163_10168724 3300014325 Bacteria 2235
137 Ga0157379_10032530 3300014968 Bacteria 4650
138 Ga0157379_10044486 3300014968 Bacteria 3963
139 Ga0157376_10104969 3300014969 Bacteria 2477
140 Ga0157376_10113780 3300014969 Bacteria 2386
141 Ga0157376_10127029 3300014969 Bacteria 2270
142 Ga0213872_10000303 3300021361 Bacteria 42065
143 Ga0213874_10001214 3300021377 Bacteria 5296
144 Ga0213876_10005021 3300021384 Bacteria 7295
145 Ga0213875_10000017 3300021388 Bacteria 239813
146 Ga0213875_10009757 3300021388 Unclassified 4845
147 Ga0213875_10043212 3300021388 Bacteria 2116
148 Ga0207680_10109611 3300025903 Bacteria 1788
149 Ga0207645_10018537 3300025907 Bacteria 4577
150 Ga0207705_10041210 3300025909 Bacteria 3312
151 Ga0207654_10014562 3300025911 Bacteria 4064
152 Ga0207654_10020296 3300025911 Bacteria 3520
153 Ga0207707_10000509 3300025912 Bacteria 39960
154 Ga0207707_10039323 3300025912 Bacteria 4135
155 Ga0207707_10042525 3300025912 Bacteria 3965
156 Ga0207695_10000470 3300025913 Bacteria 87551
157 Ga0207695_10001269 3300025913 Bacteria 42929
158 Ga0207695_10005058 3300025913 Bacteria 17685
159 Ga0207695_10008975 3300025913 Bacteria 12443
160 Ga0207695_10009168 3300025913 Bacteria 12278
161 Ga0207695_10011030 3300025913 Bacteria 10980
162 Ga0207695_10064796 3300025913 Bacteria 3760
163 Ga0207671_10004427 3300025914 Bacteria 13455
164 Ga0207671_10017096 3300025914 Bacteria 5607
165 Ga0207671_10038849 3300025914 Bacteria 3527
166 Ga0207671_10089819 3300025914 Bacteria 2313
167 Ga0207663_10007493 3300025916 Bacteria 5661
168 Ga0207660_10008842 3300025917 Bacteria 6509
169 Ga0207660_10012516 3300025917 Bacteria 5553
170 Ga0207657_10017770 3300025919 Bacteria 6808
171 Ga0207657_10064305 3300025919 Bacteria 3131
172 Ga0207657_10064643 3300025919 Bacteria 3122
173 Ga0207649_10044021 3300025920 Bacteria 2732
174 Ga0207694_10001376 3300025924 Bacteria 20931
175 Ga0207694_10006644 3300025924 Bacteria 8788
176 Ga0207694_10010735 3300025924 Bacteria 6917
177 Ga0207694_10011306 3300025924 Bacteria 6739
178 Ga0207694_10072730 3300025924 Bacteria 2688
179 Ga0207694_10226935 3300025924 Bacteria 1524
180 Ga0207687_10002080 3300025927 Bacteria 13680
181 Ga0207687_10002685 3300025927 Bacteria 12035
182 Ga0207687_10021922 3300025927 Bacteria 4247
183 Ga0207687_10179166 3300025927 Bacteria 1641
184 Ga0207700_10064262 3300025928 Bacteria 2795
185 Ga0207644_10140385 3300025931 Bacteria 1860
186 Ga0207686_10021093 3300025934 Bacteria 3733
187 Ga0207686_10137247 3300025934 Bacteria 1686
188 Ga0207709_10103891 3300025935 Bacteria 1884
189 Ga0207704_10123960 3300025938 Bacteria 1774
190 Ga0207711_10002714 3300025941 Bacteria 15622
191 Ga0207711_10017699 3300025941 Bacteria 5921
192 Ga0207711_10026663 3300025941 Bacteria 4850
193 Ga0207711_10032957 3300025941 Bacteria 4381
194 Ga0207711_10033088 3300025941 Bacteria 4373
195 Ga0207689_10024588 3300025942 Bacteria 5053
196 Ga0207661_10007221 3300025944 Bacteria 7897
197 Ga0207661_10022897 3300025944 Bacteria 4712
198 Ga0207661_10034624 3300025944 Unclassified 3930
199 Ga0207679_10185891 3300025945 Bacteria 1723
200 Ga0207679_10203817 3300025945 Bacteria 1654
201 Ga0207667_10000145 3300025949 Bacteria 107389
202 Ga0207667_10000290 3300025949 Bacteria 69361
203 Ga0207667_10004471 3300025949 Bacteria 17114
204 Ga0207667_10089945 3300025949 Bacteria 3172
205 Ga0207667_10148653 3300025949 Bacteria 2411
206 Ga0207667_10315444 3300025949 Bacteria 1597
207 Ga0207712_10016178 3300025961 Bacteria 4823
208 Ga0207677_10138856 3300026023 Bacteria 1857
209 Ga0207703_10006029 3300026035 Bacteria 9695
210 Ga0207703_10014819 3300026035 Bacteria 6084
211 Ga0207703_10033072 3300026035 Bacteria 4097
212 Ga0207703_10080348 3300026035 Bacteria 2715
213 Ga0207639_10080832 3300026041 Bacteria 2572
214 Ga0207678_10018109 3300026067 Bacteria 6186
215 Ga0207702_10003973 3300026078 Bacteria 13278
216 Ga0207702_10007823 3300026078 Bacteria 9065
217 Ga0207702_10034210 3300026078 Unclassified 4248
218 Ga0207702_10047978 3300026078 Bacteria 3600
219 Ga0207641_10013496 3300026088 Bacteria 6700
220 Ga0207641_10046339 3300026088 Bacteria 3664
221 Ga0207648_10106190 3300026089 Bacteria 2464
222 Ga0207676_10017137 3300026095 Bacteria 5248
223 Ga0207674_10000264 3300026116 Bacteria 65695
224 Ga0207674_10003901 3300026116 Bacteria 18142
225 Ga0207674_10102972 3300026116 Bacteria 2834
226 Ga0207698_10076905 3300026142 Bacteria 2674
227 Ga0207698_10099309 3300026142 Bacteria 2407
228 Ga0207698_10240945 3300026142 Bacteria 1648
229 Ga0268266_10249488 3300028379 Bacteria 1641
230 Ga0268264_10008930 3300028381 Bacteria 8317
231 Ga0268264_10121498 3300028381 Bacteria 2302
232 Ga0265337_1002317 3300028556 Bacteria 8829
233 Ga0265338_10054985 3300028800 Bacteria 3545
234 Ga0265338_10074228 3300028800 Bacteria 2894
235 Ga0265338_10184849 3300028800 Bacteria 1585
236 Ga0265324_10022988 3300029957 Bacteria 2224
237 Ga0265332_10009203 3300031238 Bacteria 4416
238 Ga0265320_10000988 3300031240 Bacteria 21174
239 Ga0265325_10026948 3300031241 Bacteria 3110
240 Ga0265340_10008965 3300031247 Bacteria 5390
241 Ga0265340_10019420 3300031247 Bacteria 3500
242 Ga0265316_10029174 3300031344 Bacteria 4540
243 Ga0265316_10142254 3300031344 Bacteria 1801
244 Ga0265316_10149717 3300031344 Bacteria 1748
245 Ga0265313_10000996 3300031595 Bacteria 27796
246 Ga0265314_10004325 3300031711 Bacteria 13256
247 Ga0265314_10006897 3300031711 Bacteria 9951
248 Ga0265314_10021606 3300031711 Bacteria 4943
249 Ga0307416_100020637 3300032002 Bacteria 4707
250 Ga0307416_100044265 3300032002 Bacteria 3493
251 Ga0307414_10096121 3300032004 Bacteria 2216
252 Ga0307415_100090938 3300032126 Bacteria 2209
253 Ga0373926_0030059 3300035083 Bacteria 1911
254 Ga0373926_0042538 3300035083 Bacteria 1625
255 Ga0373934_0003969 3300035086 Bacteria 5445
256 Ga0373934_0033398 3300035086 Bacteria 2019
257 Ga0373923_0013013 3300035111 Bacteria 3091
258 Ga0373953_0013965 3300035117 Bacteria 2879
259 Ga0373954_0002005 3300035118 Bacteria 8458
260 Ga0373954_0020038 3300035118 Bacteria 3021
261 Ga0373954_0044131 3300035118 Bacteria 2080
262 Ga0373956_0047741 3300035119 Bacteria 1916
263 Ga0373956_0075430 3300035119 Bacteria 1542
264 Ga0373957_0051569 3300035120 Bacteria 1574
265 Ga0373955_0028294 3300035172 Bacteria 2905
266 Ga0373955_0111308 3300035172 Bacteria 1583
267 Ga0373935_0006845 3300035692 Bacteria 6810
268 Ga0373935_0013237 3300035692 Bacteria 4976
269 Ga0373935_0035071 3300035692 Bacteria 3130
270 Ga0373935_0038624 3300035692 Bacteria 2990
271 Ga0373935_0101551 3300035692 Bacteria 1897
272 Ga0373927_0000391 3300035695 Bacteria 33906
273 Ga0373927_0000509 3300035695 Bacteria 29593
274 Ga0373927_0000944 3300035695 Bacteria 22130
275 Ga0373927_0025718 3300035695 Bacteria 3848
276 Ga0373933_0010268 3300035724 Bacteria 5130
277 Ga0373933_0030931 3300035724 Bacteria 3102
278 Ga0373947_0000779 3300035725 Bacteria 19145
279 Ga0373947_0011372 3300035725 Bacteria 5110
280 Ga0373937_0003683 3300036401 Bacteria 12945
281 Ga0373937_0027453 3300036401 Bacteria 5148
282 Ga0373937_0070196 3300036401 Bacteria 3231
283 Ga0373937_0124001 3300036401 Bacteria 2409
284 Ga0373937_0129358 3300036401 Bacteria 2357
285 Ga0373925_0001257 3300037068 Bacteria 22375
286 Ga0373925_0021832 3300037068 Bacteria 4667
287 Ga0373925_0053767 3300037068 Bacteria 3011
288 Ga0373925_0080053 3300037068 Bacteria 2483
289 Ga0373925_0248644 3300037068 Bacteria 1426
290 Ga0395900_0047790 3300037418 Bacteria 4408
291 Ga0395898_0121651 3300037466 Bacteria 2501
292 Ga0436364_0010652 3300037853 Unclassified 2617
293 Ga0436364_0016212 3300037853 Bacteria 11024
294 Ga0436364_0065624 3300037853 Bacteria 5039
295 Ga0436364_0074610 3300037853 Bacteria 10217
296 Ga0436364_0339530 3300037853 Bacteria 240640
297 Ga0436364_0521106 3300037853 Bacteria 2168
298 Ga0436364_1082002 3300037853 Bacteria 1832
299 Ga0436364_1329751 3300037853 Bacteria 9096
300 Ga0436364_1493205 3300037853 Bacteria 7890
301 Ga0436365_0027270 3300039437 Bacteria 19731
302 Ga0436365_0028891 3300039437 Bacteria 1833
303 Ga0436365_0414442 3300039437 Unclassified 1921
304 Ga0436365_1240073 3300039437 Unclassified 3673
305 Ga0436360_0074515 3300039438 Bacteria 15334
306 Ga0436361_0567168 3300039447 Bacteria 164343
307 Ga0436363_1304709 3300039450 Bacteria 6062
308 Ga0436362_0647672 3300039453 Bacteria 2177
309 Ga0466966_0070341 3300044684 Bacteria 2194
310 Ga0451576_0030352 3300045051 Bacteria 5778
311 Ga0495592_0091993 3300046454 Bacteria 2174
312 Ga0495580_0001344 3300046472 Bacteria 21649
313 Ga0495580_0107794 3300046472 Bacteria 1934
314 Ga0495582_0009389 3300046473 Bacteria 5388
315 Ga0495628_0106095 3300046516 Bacteria 2164
316 Ga0495665_0066697 3300046531 Bacteria 1899
317 Ga0495587_0015207 3300046536 Bacteria 4809
318 Ga0495645_0084303 3300046543 Bacteria 2276
319 Ga0495658_0123287 3300046683 Bacteria 1569
320 Ga0495674_0021680 3300047319 Bacteria 5940
321 Ga0495674_0053579 3300047319 Bacteria 3545
322 Ga0495675_0026328 3300047444 Bacteria 3708
323 Ga0495675_0068051 3300047444 Bacteria 2250
324 Ga0495684_0021437 3300047471 Bacteria 4975
325 Ga0495684_0150392 3300047471 Bacteria 1741
326 Ga0495602_0002475 3300048088 Bacteria 18822
327 Ga0496104_0109152 3300048907 Bacteria 2652
328 Ga0496104_0339037 3300048907 Bacteria 1416
329 Ga0496115_0012859 3300048918 Bacteria 6312
330 Ga0501034_0374880 3300049571 Bacteria 1349
331 Ga0501047_0040850 3300049581 Bacteria 4485
332 Ga0501047_0102602 3300049581 Unclassified 2739
333 Ga0501047_0149460 3300049581 Bacteria 2212
334 Ga0501047_0225301 3300049581 Bacteria 1730
335 Ga0501070_0033580 3300049586 Bacteria 4294
336 Ga0501035_0081524 3300049822 Unclassified 2855
337 Ga0501044_0012607 3300049823 Bacteria 9155
338 Ga0501044_0072479 3300049823 Bacteria 3501
339 Ga0501044_0103303 3300049823 Unclassified 2864
340 nmdc:mga06r32_17265_c1 3300050510 Bacteria 6588
341 nmdc:mga06r32_30714_c1 3300050510 Bacteria 5043
342 nmdc:mga08x19_4530_c1 3300050514 Bacteria 8238
343 Ga0500568_0000648 3300053139 Bacteria 25142
344 Ga0500568_0003363 3300053139 Bacteria 8945
345 Ga0590075_021950 3300059424 Bacteria 1595
346 Ga0590077_004096 3300059426 Bacteria 3000
347 Ga0530510_0105643 3300061734 Bacteria 2061
348 2587743043 2585428059 Bacteria 8696589
349 2857595028 2857591370 Bacteria 6569758
350 2857607484 2857604169 Bacteria 5111450
351 Ga0105240_10178504
352 JGI25406J46586_10023703
353 Ga0070658_10009958
354 Ga0070658_10096560
355 Ga0070683_100157451
356 Ga0070690_100147691
357 Ga0070680_100001558
358 Ga0070680_100059103
359 Ga0068868_100001532
360 Ga0068868_100064828
361 Ga0070660_100039560
362 Ga0070660_100050503
363 Ga0070661_100084545
364 Ga0070671_100167631
365 Ga0070709_10172066
366 Ga0070714_100046647
367 Ga0070711_100010814
368 Ga0070681_10002648
369 Ga0070681_10007642
370 Ga0070681_10025939
371 Ga0070681_10037392
372 Ga0070679_100000878
373 Ga0070679_100007857
374 Ga0070679_100034819
375 Ga0070679_100125891
376 Ga0070679_100176496
377 Ga0070684_100009906
378 Ga0070695_100099018
379 Ga0070696_100005362
380 Ga0070693_100027418
381 Ga0070665_100219672
382 Ga0068855_100007285
383 Ga0068855_100008357
384 Ga0068855_100026454
385 Ga0068855_100044701
386 Ga0068855_100086449
387 Ga0070664_100037988
388 Ga0070664_100200219
389 Ga0068857_100000098
390 Ga0068857_100002610
391 Ga0068857_100004597
392 Ga0068856_100000431
393 Ga0068856_100024562
394 Ga0068856_100038203
395 Ga0068856_100039807
396 Ga0068856_100050402
397 Ga0068856_100103233
398 Ga0068856_100241075
399 Ga0068852_100008290
400 Ga0068852_100017511
401 Ga0068864_100008637
402 Ga0068863_100020699
403 Ga0068863_100109383
404 Ga0068863_100130769
405 Ga0068858_100029253
406 Ga0068858_100031643
407 Ga0081455_10065109
408 Ga0081538_10015883
409 Ga0081538_10061551
410 Ga0081539_10001149
411 Ga0081539_10009744
412 Ga0070717_10024603
413 Ga0070717_10027228
414 Ga0097621_100011822
415 Ga0097621_100041359
416 Ga0097621_100107537
417 Ga0097621_100145054
418 Ga0068871_100039939
419 Ga0068871_100055032
420 Ga0075431_100037783
421 Ga0075431_100062202
422 Ga0068865_100078556
423 Ga0105240_10000235
424 Ga0105240_10001011
425 Ga0105240_10003098
426 Ga0105240_10246572
427 Ga0105245_10000827
428 Ga0105245_10002868
429 Ga0105245_10003605
430 Ga0105245_10008858
431 Ga0114129_10216040
432 Ga0105243_10162873
433 Ga0105241_10003348
434 Ga0105241_10004806
435 Ga0105241_10009147
436 Ga0105241_10010410
437 Ga0105242_10003739
438 Ga0105242_10006911
439 Ga0105242_10048578
440 Ga0105242_10053706
441 Ga0105242_10071964
442 Ga0105248_10010505
443 Ga0105248_10031153
444 Ga0105248_10033422
445 Ga0105248_10037046
446 Ga0105248_10211251
447 Ga0105237_10001791
448 Ga0105237_10014213
449 Ga0105237_10017125
450 Ga0105237_10029102
451 Ga0105237_10059785
452 Ga0105237_10066696
453 Ga0105237_10182190
454 Ga0105237_10221351
455 Ga0105238_10001899
456 Ga0105238_10004090
457 Ga0105238_10009949
458 Ga0105238_10025617
459 Ga0105238_10057819
460 Ga0105238_10058174
461 Ga0105249_10002362
462 Ga0105249_10136433
463 Ga0105239_10003045
464 Ga0105239_10008201
465 Ga0105239_10030924
466 Ga0105239_10230601
467 Ga0105246_10158591
468 Ga0157371_10076854
469 Ga0157370_10009247
470 Ga0157370_10012985
471 Ga0157370_10023200
472 Ga0157369_10001061
473 Ga0157369_10001514
474 Ga0157369_10009608
475 Ga0157369_10017634
476 Ga0157369_10188253
477 Ga0157374_10008597
478 Ga0157374_10234751
479 Ga0157378_10087023
480 Ga0157372_10008955
481 Ga0157372_10025974
482 Ga0157372_10028231
483 Ga0157372_10063232
484 Ga0163163_10000883
485 Ga0163163_10074361
486 Ga0163163_10168724
487 Ga0157379_10032530
488 Ga0157379_10044486
489 Ga0157376_10104969
490 Ga0157376_10113780
491 Ga0157376_10127029
492 Ga0213872_10000303
493 Ga0213874_10001214
494 Ga0213876_10005021
495 Ga0213875_10000017
496 Ga0213875_10009757
497 Ga0213875_10043212
498 Ga0207680_10109611
499 Ga0207645_10018537
500 Ga0207705_10041210
501 Ga0207654_10014562
502 Ga0207654_10020296
503 Ga0207707_10000509
504 Ga0207707_10039323
505 Ga0207707_10042525
506 Ga0207695_10000470
507 Ga0207695_10001269
508 Ga0207695_10005058
509 Ga0207695_10008975
510 Ga0207695_10009168
511 Ga0207695_10011030
512 Ga0207695_10064796
513 Ga0207671_10004427
514 Ga0207671_10017096
515 Ga0207671_10038849
516 Ga0207671_10089819
517 Ga0207663_10007493
518 Ga0207660_10008842
519 Ga0207660_10012516
520 Ga0207657_10017770
521 Ga0207657_10064305
522 Ga0207657_10064643
523 Ga0207649_10044021
524 Ga0207694_10001376
525 Ga0207694_10006644
526 Ga0207694_10010735
527 Ga0207694_10011306
528 Ga0207694_10072730
529 Ga0207694_10226935
530 Ga0207687_10002080
531 Ga0207687_10002685
532 Ga0207687_10021922
533 Ga0207687_10179166
534 Ga0207700_10064262
535 Ga0207644_10140385
536 Ga0207686_10021093
537 Ga0207686_10137247
538 Ga0207709_10103891
539 Ga0207704_10123960
540 Ga0207711_10002714
541 Ga0207711_10017699
542 Ga0207711_10026663
543 Ga0207711_10032957
544 Ga0207711_10033088
545 Ga0207689_10024588
546 Ga0207661_10007221
547 Ga0207661_10022897
548 Ga0207661_10034624
549 Ga0207679_10185891
550 Ga0207679_10203817
551 Ga0207667_10000145
552 Ga0207667_10000290
553 Ga0207667_10004471
554 Ga0207667_10089945
555 Ga0207667_10148653
556 Ga0207667_10315444
557 Ga0207712_10016178
558 Ga0207677_10138856
559 Ga0207703_10006029
560 Ga0207703_10014819
561 Ga0207703_10033072
562 Ga0207703_10080348
563 Ga0207639_10080832
564 Ga0207678_10018109
565 Ga0207702_10003973
566 Ga0207702_10007823
567 Ga0207702_10034210
568 Ga0207702_10047978
569 Ga0207641_10013496
570 Ga0207641_10046339
571 Ga0207648_10106190
572 Ga0207676_10017137
573 Ga0207674_10000264
574 Ga0207674_10003901
575 Ga0207674_10102972
576 Ga0207698_10076905
577 Ga0207698_10099309
578 Ga0207698_10240945
579 Ga0268266_10249488
580 Ga0268264_10008930
581 Ga0268264_10121498
582 Ga0265337_1002317
583 Ga0265338_10054985
584 Ga0265338_10074228
585 Ga0265338_10184849
586 Ga0265324_10022988
587 Ga0265332_10009203
588 Ga0265320_10000988
589 Ga0265325_10026948
590 Ga0265340_10008965
591 Ga0265340_10019420
592 Ga0265316_10029174
593 Ga0265316_10142254
594 Ga0265316_10149717
595 Ga0265313_10000996
596 Ga0265314_10004325
597 Ga0265314_10006897
598 Ga0265314_10021606
599 Ga0307416_100020637
600 Ga0307416_100044265
601 Ga0307414_10096121
602 Ga0307415_100090938
603 Ga0373926_0030059
604 Ga0373926_0042538
605 Ga0373934_0003969
606 Ga0373934_0033398
607 Ga0373923_0013013
608 Ga0373953_0013965
609 Ga0373954_0002005
610 Ga0373954_0020038
611 Ga0373954_0044131
612 Ga0373956_0047741
613 Ga0373956_0075430
614 Ga0373957_0051569
615 Ga0373955_0028294
616 Ga0373955_0111308
617 Ga0373935_0006845
618 Ga0373935_0013237
619 Ga0373935_0035071
620 Ga0373935_0038624
621 Ga0373935_0101551
622 Ga0373927_0000391
623 Ga0373927_0000509
624 Ga0373927_0000944
625 Ga0373927_0025718
626 Ga0373933_0010268
627 Ga0373933_0030931
628 Ga0373947_0000779
629 Ga0373947_0011372
630 Ga0373937_0003683
631 Ga0373937_0027453
632 Ga0373937_0070196
633 Ga0373937_0124001
634 Ga0373937_0129358
635 Ga0373925_0001257
636 Ga0373925_0021832
637 Ga0373925_0053767
638 Ga0373925_0080053
639 Ga0373925_0248644
640 Ga0395900_0047790
641 Ga0395898_0121651
642 Ga0436364_0010652
643 Ga0436364_0016212
644 Ga0436364_0065624
645 Ga0436364_0074610
646 Ga0436364_0339530
647 Ga0436364_0521106
648 Ga0436364_1082002
649 Ga0436364_1329751
650 Ga0436364_1493205
651 Ga0436365_0027270
652 Ga0436365_0028891
653 Ga0436365_0414442
654 Ga0436365_1240073
655 Ga0436360_0074515
656 Ga0436361_0567168
657 Ga0436363_1304709
658 Ga0436362_0647672
659 Ga0466966_0070341
660 Ga0451576_0030352
661 Ga0495592_0091993
662 Ga0495580_0001344
663 Ga0495580_0107794
664 Ga0495582_0009389
665 Ga0495628_0106095
666 Ga0495665_0066697
667 Ga0495587_0015207
668 Ga0495645_0084303
669 Ga0495658_0123287
670 Ga0495674_0021680
671 Ga0495674_0053579
672 Ga0495675_0026328
673 Ga0495675_0068051
674 Ga0495684_0021437
675 Ga0495684_0150392
676 Ga0495602_0002475
677 Ga0496104_0109152
678 Ga0496104_0339037
679 Ga0496115_0012859
680 Ga0501034_0374880
681 Ga0501047_0040850
682 Ga0501047_0102602
683 Ga0501047_0149460
684 Ga0501047_0225301
685 Ga0501070_0033580
686 Ga0501035_0081524
687 Ga0501044_0012607
688 Ga0501044_0072479
689 Ga0501044_0103303
690 nmdc:mga06r32_17265_c1
691 nmdc:mga06r32_30714_c1
692 nmdc:mga08x19_4530_c1
693 Ga0500568_0000648
694 Ga0500568_0003363
695 Ga0590075_021950
696 Ga0590077_004096
697 Ga0530510_0105643
698 2587743043
699 2857595028
700 2857607484

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00984

UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

221

314

0.99

PF03720

UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

336

439

0.97

PF03721

UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

1

189

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ka7-assembly1.cif.gz_A crystal structure of an oxidoreductase from methanosarcina mazei. northeast structural genomics consortium target id mar208 0.9707 17 47
3gg2-assembly1.cif.gz_B crystal structure of udp-glucose 6-dehydrogenase from porphyromonas gingivalis bound to product udp-glucuronate 0.9675 17 462
3gg2-assembly1.cif.gz_C crystal structure of udp-glucose 6-dehydrogenase from porphyromonas gingivalis bound to product udp-glucuronate 0.9675 17 455
4a7p-assembly2.cif.gz_B-2 se-met derivatized ugdg, udp-glucose dehydrogenase from sphingomonas elodea 0.967 16 469
4a7p-assembly1.cif.gz_A-2 se-met derivatized ugdg, udp-glucose dehydrogenase from sphingomonas elodea 0.9651 14 469
ID Description Score Start End Superfamily
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9803 14 47 3.50.50.60
af_B0G160_35_582_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9759 17 46 3.50.50.60
af_Q5VQP1_29_415_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9742 17 45 3.50.50.60
5eowA00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9626 17 49 3.50.50.60
af_A0A1D6E7M3_47_537_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.959 17 47 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A4Q6DSS8-F1-model_v4 UDP-glucose 6-dehydrogenase 0.9943 17 120 GO:0016616
GO:0051287
AF-A0A3C0RBE8-F1-model_v4 UDP-glucose 6-dehydrogenase 0.9913 243 340 GO:0016616
GO:0051287
AF-K1TTF2-F1-model_v4 Membrane protein containing UDP-glucose/GDP-mannose dehydrogenase (EC 1.1.1.-) 0.9899 17 101 GO:0016020
GO:0016616
GO:0051287
AF-A0A3C0BYV8-F1-model_v4 UDP-glucose 6-dehydrogenase 0.988 16 112 GO:0016616
GO:0051287
AF-A0A0G0RXA4-F1-model_v4 Nucleotide sugar dehydrogenase 0.9876 17 113 GO:0016616
GO:0051287

Map