F418072

General Info

Members Datasets Scaffolds Average Seq Length
349 199 700 288

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862507626|2862511530
Length 303
Sequence IQKDGTWAFDGNTLRLTPGRDKNVGLLRRTLGELLVPLSALAGISLEQGRKAGRLRLRLREGSDPLLQATGGRLTEPHDPYQLVVESDRYGVAEYFTDEVRNALLLDQVPSDPVQEYLLPGPSIPLSASAGDGSVSFDGERIRLEWNWKTEDAKSAAGTRTLALTDIVAVEWVPATGLENGHLRFVVHHAPTKAPAKYDPNAVELWGFKKDPLMALVAAAVQARLPHPAARDSTLALGGDTARDRAGHEGPAEPETVPGTSAASEDEHDALLRRLRELGELHRSGVLTDEEFTLAKQAVLKRL

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
11 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
12 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
15 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
16 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
17 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
18 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
19 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
24 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
25 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
26 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
27 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
28 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
29 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
30 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
31 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
32 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
33 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
34 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
35 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
36 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
37 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
38 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
39 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
40 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
41 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
42 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
43 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
44 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
45 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
46 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
47 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
48 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
49 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
50 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
51 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
52 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
53 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
54 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
55 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
56 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
57 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
58 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
59 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
60 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
63 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
64 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
68 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
71 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
72 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
73 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
74 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
75 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
78 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
79 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
80 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
81 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
82 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
83 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
84 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
85 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
86 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
87 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
88 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
89 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
90 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
91 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
92 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
93 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
94 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
95 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
96 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
97 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
98 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
101 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
102 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
103 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
104 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
105 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
106 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
107 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
108 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
113 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
114 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
115 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
116 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
117 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
120 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
121 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
122 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
123 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
124 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
125 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
126 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
132 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
133 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
134 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
135 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
139 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
140 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
141 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
142 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
143 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
144 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
158 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
159 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
160 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
161 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
163 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
164 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
165 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
166 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
167 2643221647 Streptomyces sp. Root369 Isolate Unclassified
168 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
169 2643221714 Streptomyces sp. Root264 Isolate Unclassified
170 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
171 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
172 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
173 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
174 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
175 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
176 2808606448 Streptomyces sp. 193411 Isolate Unclassified
177 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
178 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
179 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
180 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
181 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
182 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
183 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
184 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
185 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
186 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
187 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
188 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
189 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
190 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
191 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
192 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
193 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
194 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
195 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
196 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
197 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
198 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
199 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.96
Metatranscriptomes 0.86
Isolates 13.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.72
Nodule 1.43
Rhizoplane 0
Rhizosphere 78.8
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10025843 3300001989 Bacteria 2064
2 rootH1_10028510 3300003316 Bacteria 3502
3 rootH1_10028510 3300003323 Bacteria 6895
4 rootH1_10039966 3300003316 Bacteria 1041
5 rootH1_10039966 3300003323 Bacteria 11109
6 rootH2_10013430 3300003320 Bacteria 11358
7 rootH2_10018173 3300003320 Bacteria 7667
8 rootL2_10080614 3300003322 Bacteria 2949
9 rootH1_10027188 3300003323 Bacteria 5221
10 rootH1_10080435 3300003323 Bacteria 3070
11 Ga0006562J51391_1089805 3300003578 Bacteria 5050
12 Ga0006562J51391_1089806 3300003578 Bacteria 3690
13 Ga0006562J51391_1103169 3300003578 Bacteria 1380
14 Ga0070663_100411578 3300005455 Bacteria 1107
15 Ga0068853_100027198 3300005539 Bacteria 4806
16 Ga0081455_10043591 3300005937 Bacteria 3922
17 Ga0070715_10134855 3300006163 Bacteria 1192
18 Ga0099826_10064115 3300006948 Bacteria 2370
19 Ga0105251_10016691 3300009011 Bacteria 3958
20 Ga0105243_10110112 3300009148 Bacteria 2302
21 Ga0105243_10157702 3300009148 Bacteria 1953
22 Ga0105246_10003995 3300011119 Bacteria 8946
23 Ga0105246_10308495 3300011119 Bacteria 1281
24 Ga0157372_10285609 3300013307 Bacteria 1919
25 Ga0182008_10001729 3300014497 Bacteria 14335
26 Ga0182007_10001419 3300015262 Bacteria 12860
27 Ga0183367_1002 3300015688 Bacteria 1101531
28 Ga0183367_1006 3300015688 Bacteria 648044
29 Ga0207647_10002453 3300025904 Bacteria 14063
30 Ga0207691_10245474 3300025940 Bacteria 1547
31 Ga0207639_10020774 3300026041 Bacteria 4706
32 Ga0209371_1028160 3300027312 Bacteria 1256
33 Ga0307517_10012094 3300028786 Bacteria 11894
34 Ga0307515_10006210 3300028794 Bacteria 23997
35 Ga0307515_10083607 3300028794 Bacteria 4112
36 Ga0307515_10098068 3300028794 Bacteria 3573
37 Ga0268256_1024347 3300030500 Bacteria 1555
38 Ga0307511_10000477 3300030521 Bacteria 43424
39 Ga0307511_10086018 3300030521 Bacteria 2169
40 Ga0307512_10002642 3300030522 Bacteria 22156
41 Ga0307512_10003793 3300030522 Bacteria 17069
42 Ga0307512_10096624 3300030522 Bacteria 2025
43 Ga0307513_10058769 3300031456 Bacteria 4084
44 Ga0307513_10088634 3300031456 Bacteria 3162
45 Ga0307509_10008150 3300031507 Bacteria 13433
46 Ga0307509_10044789 3300031507 Bacteria 4777
47 Ga0307509_10122577 3300031507 Bacteria 2574
48 Ga0307508_10020472 3300031616 Bacteria 6007
49 Ga0307508_10047748 3300031616 Bacteria 3815
50 Ga0307508_10077029 3300031616 Bacteria 2913
51 Ga0307514_10001878 3300031649 Bacteria 23182
52 Ga0307514_10080659 3300031649 Bacteria 2407
53 Ga0307514_10087962 3300031649 Bacteria 2275
54 Ga0307516_10004046 3300031730 Bacteria 18371
55 Ga0307516_10114600 3300031730 Bacteria 2493
56 Ga0307518_10011518 3300031838 Bacteria 6328
57 Ga0307518_10167530 3300031838 Bacteria 1501
58 Ga0307507_10092587 3300033179 Bacteria 2579
59 Ga0307507_10191013 3300033179 Bacteria 1439
60 Ga0307510_10024273 3300033180 Bacteria 7008
61 Ga0307510_10030464 3300033180 Bacteria 6116
62 Ga0307510_10055437 3300033180 Bacteria 4140
63 Ga0395898_0011283 3300037466 Bacteria 9292
64 Ga0395898_0015191 3300037466 Bacteria 7904
65 Ga0395898_0079943 3300037466 Bacteria 3153
66 Ga0439436_0000632 3300041404 Bacteria 9363
67 Ga0439436_0002753 3300041404 Bacteria 5312
68 Ga0439439_0003768 3300041406 Bacteria 3367
69 Ga0451837_1722638 3300041494 Bacteria 2270
70 Ga0451853_0112257 3300041512 Bacteria 4548
71 Ga0451853_0218760 3300041512 Bacteria 5629
72 Ga0451853_0490633 3300041512 Bacteria 1019
73 Ga0451853_2698293 3300041512 Bacteria 1615
74 Ga0439433_0000094 3300041999 Bacteria 12285
75 Ga0439433_0026077 3300041999 Bacteria 1322
76 Ga0439442_021605 3300042002 Bacteria 1335
77 Ga0439448_0003898 3300042005 Bacteria 4179
78 Ga0439432_047883 3300042006 Bacteria 1340
79 Ga0439449_0028020 3300042007 Bacteria 2100
80 Ga0439455_0017103 3300042012 Bacteria 1685
81 Ga0439457_000331 3300042014 Bacteria 13021
82 Ga0439457_000589 3300042014 Bacteria 10654
83 Ga0439457_001176 3300042014 Bacteria 7862
84 Ga0439457_029472 3300042014 Bacteria 1216
85 Ga0439462_0002907 3300042015 Bacteria 4056
86 Ga0439462_0022728 3300042015 Bacteria 1642
87 Ga0450894_000783 3300042131 Bacteria 5178
88 Ga0450896_000852 3300042133 Bacteria 3478
89 Ga0450898_000377 3300042134 Bacteria 5159
90 Ga0450903_000242 3300042138 Bacteria 12093
91 Ga0450903_005091 3300042138 Bacteria 2210
92 Ga0450906_000369 3300042145 Bacteria 9133
93 Ga0439458_0000349 3300042157 Bacteria 11531
94 Ga0450908_002142 3300042184 Bacteria 3867
95 Ga0466969_0173423 3300044656 Bacteria 988
96 Ga0466972_0027011 3300044658 Bacteria 2842
97 Ga0466972_0036060 3300044658 Bacteria 2420
98 Ga0466965_0002563 3300044683 Bacteria 7760
99 Ga0466966_0001457 3300044684 Bacteria 15214
100 Ga0466961_0004786 3300044693 Bacteria 8525
101 Ga0466961_0004829 3300044693 Bacteria 8484
102 Ga0466963_0000032 3300044694 Bacteria 46204
103 Ga0466963_0000410 3300044694 Bacteria 19654
104 Ga0466963_0075098 3300044694 Bacteria 2281
105 Ga0466964_0011903 3300044706 Bacteria 3287
106 Ga0466964_0024243 3300044706 Bacteria 2363
107 Ga0466971_0099342 3300044719 Bacteria 1336
108 Ga0466968_0059114 3300044735 Bacteria 1651
109 Ga0466970_0006238 3300044765 Bacteria 5947
110 Ga0466970_0020119 3300044765 Bacteria 3464
111 Ga0466957_0000143 3300044842 Bacteria 30758
112 Ga0466957_0004065 3300044842 Bacteria 8097
113 Ga0466959_0012770 3300045049 Bacteria 6077
114 Ga0466959_0014474 3300045049 Bacteria 5733
115 Ga0466958_0004959 3300045836 Bacteria 7099
116 Ga0466967_0002249 3300045976 Bacteria 11891
117 Ga0466967_0025682 3300045976 Bacteria 4860
118 Ga0466967_0027546 3300045976 Bacteria 4729
119 Ga0466967_0418043 3300045976 Bacteria 1306
120 Ga0495617_005554 3300046452 Bacteria 4463
121 Ga0495627_034593 3300046453 Bacteria 1578
122 Ga0495592_0015018 3300046454 Bacteria 5880
123 Ga0495592_0032568 3300046454 Bacteria 3932
124 Ga0495603_0005714 3300046455 Bacteria 7436
125 Ga0495603_0009196 3300046455 Bacteria 5971
126 Ga0495603_0013251 3300046455 Bacteria 4985
127 Ga0495603_0015393 3300046455 Bacteria 4627
128 Ga0495603_0164451 3300046455 Bacteria 1286
129 Ga0495629_0019186 3300046459 Bacteria 4888
130 Ga0495629_0032750 3300046459 Bacteria 3679
131 Ga0495629_0045195 3300046459 Bacteria 3090
132 Ga0495629_0060315 3300046459 Bacteria 2651
133 Ga0495629_0230236 3300046459 Bacteria 1277
134 Ga0495638_0044274 3300046460 Bacteria 2804
135 Ga0495638_0177933 3300046460 Bacteria 1216
136 Ga0495651_0007078 3300046462 Bacteria 8576
137 Ga0495580_0329774 3300046472 Bacteria 1036
138 Ga0495582_0050711 3300046473 Bacteria 2287
139 Ga0495582_0112676 3300046473 Bacteria 1528
140 Ga0495605_0018620 3300046474 Bacteria 3718
141 Ga0495605_0019482 3300046474 Bacteria 3623
142 Ga0495639_0024626 3300046475 Bacteria 2650
143 Ga0495662_0000971 3300046476 Bacteria 14034
144 Ga0495662_0052175 3300046476 Bacteria 1974
145 Ga0495664_0000582 3300046477 Bacteria 18410
146 Ga0495585_0089093 3300046492 Bacteria 1663
147 Ga0495585_0204243 3300046492 Bacteria 1004
148 Ga0495594_0093370 3300046499 Bacteria 1687
149 Ga0495594_0104624 3300046499 Bacteria 1593
150 Ga0495607_0006963 3300046501 Bacteria 7875
151 Ga0495583_0019906 3300046506 Bacteria 3492
152 Ga0495583_0140043 3300046506 Bacteria 1007
153 Ga0495606_0023099 3300046507 Bacteria 4516
154 Ga0495606_0040455 3300046507 Bacteria 3133
155 Ga0495608_0285626 3300046511 Bacteria 1023
156 Ga0495610_0020977 3300046512 Bacteria 3606
157 Ga0495616_0032993 3300046513 Bacteria 2701
158 Ga0495618_0021841 3300046514 Bacteria 3948
159 Ga0495620_0026708 3300046515 Bacteria 2710
160 Ga0495620_0030124 3300046515 Bacteria 2502
161 Ga0495620_0059087 3300046515 Bacteria 1603
162 Ga0495628_0049540 3300046516 Bacteria 3326
163 Ga0495628_0127486 3300046516 Bacteria 1948
164 Ga0495628_0206303 3300046516 Bacteria 1479
165 Ga0495628_0310999 3300046516 Bacteria 1164
166 Ga0495630_0013123 3300046517 Bacteria 6024
167 Ga0495630_0363437 3300046517 Bacteria 1108
168 Ga0495631_0045017 3300046518 Bacteria 1943
169 Ga0495643_0013471 3300046522 Bacteria 4889
170 Ga0495643_0019318 3300046522 Bacteria 3944
171 Ga0495648_0015988 3300046524 Bacteria 5422
172 Ga0495648_0018266 3300046524 Bacteria 4974
173 Ga0495648_0139722 3300046524 Bacteria 1276
174 Ga0495666_0030475 3300046526 Bacteria 2646
175 Ga0495666_0130872 3300046526 Bacteria 1172
176 Ga0495666_0214486 3300046526 Bacteria 882
177 Ga0495652_0099349 3300046529 Bacteria 2363
178 Ga0495652_0117167 3300046529 Bacteria 2131
179 Ga0495654_0018086 3300046530 Bacteria 3697
180 Ga0495640_0011847 3300046533 Bacteria 6688
181 Ga0495640_0032640 3300046533 Bacteria 3707
182 Ga0495587_0001380 3300046536 Bacteria 16149
183 Ga0495609_0004156 3300046538 Bacteria 8041
184 Ga0495622_0008492 3300046557 Bacteria 4755
185 Ga0495622_0020724 3300046557 Bacteria 3061
186 Ga0495633_0023919 3300046558 Bacteria 3022
187 Ga0495633_0062340 3300046558 Bacteria 1745
188 Ga0495667_0044641 3300046559 Bacteria 2935
189 Ga0495667_0101757 3300046559 Bacteria 1859
190 Ga0495667_0204733 3300046559 Bacteria 1262
191 Ga0495656_0044112 3300046615 Bacteria 1876
192 Ga0495668_0045330 3300046616 Bacteria 2444
193 Ga0495668_0239525 3300046616 Bacteria 993
194 Ga0495634_0000830 3300046642 Bacteria 29781
195 Ga0495634_0189072 3300046642 Bacteria 1285
196 Ga0495611_0024473 3300046648 Bacteria 2626
197 Ga0495625_0004627 3300046660 Bacteria 12932
198 Ga0495625_0104854 3300046660 Bacteria 1937
199 Ga0495625_0359389 3300046660 Bacteria 918
200 Ga0495635_0000558 3300046663 Bacteria 23721
201 Ga0495635_0151926 3300046663 Bacteria 1576
202 Ga0495661_0109574 3300046665 Bacteria 1541
203 Ga0495588_0016516 3300046674 Bacteria 3568
204 Ga0495588_0018528 3300046674 Bacteria 3396
205 Ga0495588_0084235 3300046674 Bacteria 1661
206 Ga0495657_0001523 3300046675 Bacteria 19960
207 Ga0495657_0007990 3300046675 Bacteria 8111
208 Ga0495657_0017328 3300046675 Bacteria 5230
209 Ga0495599_0224211 3300046678 Bacteria 1149
210 Ga0495646_0000540 3300046680 Bacteria 20365
211 Ga0495646_0197770 3300046680 Bacteria 1096
212 Ga0495658_0037891 3300046683 Bacteria 2667
213 Ga0495613_0038773 3300046689 Bacteria 3531
214 Ga0495613_0082772 3300046689 Bacteria 2330
215 Ga0495613_0098025 3300046689 Bacteria 2118
216 Ga0495613_0117467 3300046689 Bacteria 1912
217 Ga0495613_0284477 3300046689 Bacteria 1147
218 Ga0495624_0160912 3300046690 Bacteria 1371
219 Ga0495671_0002279 3300046692 Bacteria 12197
220 Ga0495671_0044726 3300046692 Bacteria 2219
221 Ga0495671_0201386 3300046692 Bacteria 965
222 Ga0495649_0018195 3300046694 Bacteria 3958
223 Ga0495649_0028280 3300046694 Bacteria 3107
224 Ga0495649_0094559 3300046694 Bacteria 1591
225 Ga0495649_0121751 3300046694 Bacteria 1379
226 Ga0495649_0156798 3300046694 Bacteria 1194
227 Ga0495589_0024289 3300046794 Bacteria 3081
228 Ga0495589_0042506 3300046794 Bacteria 2264
229 Ga0495589_0044494 3300046794 Bacteria 2208
230 Ga0495589_0072441 3300046794 Bacteria 1683
231 Ga0495589_0078999 3300046794 Bacteria 1601
232 Ga0495600_0003102 3300046809 Bacteria 9720
233 Ga0495660_0009710 3300046810 Bacteria 5606
234 Ga0495660_0047024 3300046810 Bacteria 2364
235 Ga0495660_0048411 3300046810 Bacteria 2324
236 Ga0495581_0022402 3300047315 Bacteria 3661
237 Ga0495604_0045793 3300047317 Bacteria 3412
238 Ga0495604_0071590 3300047317 Bacteria 2622
239 Ga0495604_0198464 3300047317 Bacteria 1394
240 Ga0495636_0001012 3300047318 Bacteria 10541
241 Ga0495636_0007224 3300047318 Bacteria 4373
242 Ga0495636_0015962 3300047318 Bacteria 2995
243 Ga0495636_0020355 3300047318 Bacteria 2674
244 Ga0495636_0185000 3300047318 Bacteria 946
245 Ga0495674_0043595 3300047319 Bacteria 3993
246 Ga0495674_0256922 3300047319 Bacteria 1436
247 Ga0495674_0270654 3300047319 Bacteria 1394
248 Ga0495676_0004326 3300047321 Bacteria 12978
249 Ga0495676_0034793 3300047321 Bacteria 4222
250 Ga0495676_0050147 3300047321 Bacteria 3349
251 Ga0495680_0006988 3300047322 Bacteria 10408
252 Ga0495680_0014234 3300047322 Bacteria 6898
253 Ga0495687_002174 3300047443 Bacteria 16321
254 Ga0495687_005273 3300047443 Bacteria 8299
255 Ga0495687_025534 3300047443 Bacteria 2790
256 Ga0495687_028289 3300047443 Bacteria 2609
257 Ga0495677_0020737 3300047445 Bacteria 2382
258 Ga0495677_0027718 3300047445 Bacteria 2055
259 Ga0495685_004073 3300047447 Bacteria 4699
260 Ga0495685_019210 3300047447 Bacteria 2347
261 Ga0495685_037674 3300047447 Bacteria 1657
262 Ga0495685_086686 3300047447 Bacteria 1039
263 Ga0495681_0007136 3300047470 Bacteria 7198
264 Ga0495681_0031560 3300047470 Bacteria 2679
265 Ga0495684_0164740 3300047471 Bacteria 1652
266 Ga0495686_0015853 3300047472 Bacteria 5127
267 Ga0495686_0025884 3300047472 Bacteria 3842
268 Ga0495593_0004443 3300047673 Bacteria 8330
269 Ga0495593_0076105 3300047673 Bacteria 1739
270 Ga0495593_0130170 3300047673 Bacteria 1277
271 Ga0495602_0030999 3300048088 Bacteria 5062
272 Ga0495614_0009981 3300048089 Bacteria 4191
273 Ga0495614_0121617 3300048089 Bacteria 1151
274 Ga0495626_0031365 3300048091 Bacteria 2558
275 Ga0495626_0049248 3300048091 Bacteria 1951
276 Ga0495678_009605 3300049459 Bacteria 4769
277 Ga0495678_029427 3300049459 Bacteria 2306
278 Ga0495682_0038904 3300049460 Bacteria 1747
279 Ga0501033_0008478 3300049570 Bacteria 7956
280 Ga0501033_0016454 3300049570 Bacteria 5602
281 Ga0501034_0050442 3300049571 Bacteria 4197
282 Ga0501034_0099733 3300049571 Bacteria 2899
283 Ga0501036_0033718 3300049572 Bacteria 4330
284 Ga0501036_0288011 3300049572 Bacteria 1374
285 Ga0501038_0005410 3300049574 Bacteria 11870
286 Ga0501038_0007034 3300049574 Bacteria 10391
287 Ga0501043_0085245 3300049579 Bacteria 2482
288 Ga0501047_0133894 3300049581 Bacteria 2358
289 Ga0501070_0151389 3300049586 Bacteria 1914
290 Ga0501074_0418766 3300049590 Bacteria 950
291 Ga0501080_0044256 3300049742 Bacteria 4144
292 Ga0501035_0018966 3300049822 Bacteria 6334
293 Ga0501035_0148255 3300049822 Bacteria 2037
294 Ga0501044_0084080 3300049823 Bacteria 3216
295 Ga0501044_0160717 3300049823 Bacteria 2223
296 Ga0501044_0161201 3300049823 Bacteria 2219
297 Ga0501045_0188596 3300049824 Bacteria 1537
298 nmdc:mga03n38_3737_c1 3300050490 Bacteria 4933
299 nmdc:mga06z11_1688_c1 3300050494 Bacteria 8285
300 Ga0500644_0005715 3300053088 Bacteria 3149
301 Ga0500640_017768 3300053095 Bacteria 3023
302 Ga0500553_022551 3300053101 Bacteria 3181
303 Ga0500572_007050 3300053111 Bacteria 2592
304 Ga0466962_0000267 3300061719 Bacteria 21974
305 Ga0466962_0008612 3300061719 Bacteria 4889
306 2862511530 2862507626 Bacteria 9425308
307 2547407005 2547132111 Bacteria 8013147
308 2585319752 2582581314 Bacteria 11452267
309 2616697637 2616644814 Bacteria 11555299
310 2644263277 2643221647 Bacteria 10741251
311 2644436581 2643221678 Bacteria 9540101
312 2644625583 2643221714 Bacteria 9015452
313 2644633190 2643221714 Bacteria 9015452
314 2784588039 2784132148 Bacteria 8627943
315 2785341771 2784746763 Bacteria 9783172
316 2785344038 2784746763 Bacteria 9783172
317 2785368809 2784746768 Bacteria 10036182
318 2785370874 2784746768 Bacteria 10036182
319 2786669908 2786546132 Bacteria 10419719
320 2808841474 2808606359 Bacteria 9866990
321 2808920040 2808606375 Bacteria 9466072
322 2809231639 2808606448 Bacteria 8656184
323 2812358772 2811994879 Bacteria 9313447
324 2812481067 2811994917 Bacteria 7761064
325 2852641938 2852635781 Bacteria 8251373
326 2862287101 2862281513 Bacteria 9621493
327 2862287903 2862281513 Bacteria 9621493
328 2862386514 2862382967 Bacteria 10317375
329 2862389459 2862382967 Bacteria 10317375
330 2863405307 2863404153 Bacteria 9672205
331 2863411460 2863404153 Bacteria 9672205
332 2873156417 2873151551 Bacteria 8625867
333 2912720667 2912715099 Bacteria 9460473
334 2912724828 2912723979 Bacteria 8557534
335 2919473521 2919468124 Bacteria 9133025
336 2946067105 2946064051 Bacteria 8957905
337 2947230137 2947224130 Bacteria 9938529
338 2954003335 2954002825 Bacteria 9173742
339 2954004845 2954002825 Bacteria 9173742
340 2954386851 2954380949 Bacteria 10050426
341 2954676337 2954673503 Bacteria 9685905
342 2954687831 2954682443 Bacteria 9862841
343 2954697670 2954691527 Bacteria 10720516
344 2954704546 2954701450 Bacteria 10834262
345 3006496337 3006493962 Bacteria 8825450
346 3006498912 3006493962 Bacteria 8825450
347 8008559769 8008558824 Bacteria 10610750
348 8008566653 8008558824 Bacteria 10610750
349 8008579377 8008574985 Bacteria 7815457
350 8023631045 8023623736 Bacteria 8593882
351 8056830246 8056829672 Bacteria 9045328
352 JGI24739J22299_10025843
353 rootH1_10028510
354 rootH1_10039966
355 rootH2_10013430
356 rootH2_10018173
357 rootL2_10080614
358 rootH1_10027188
359 rootH1_10080435
360 Ga0006562J51391_1089805
361 Ga0006562J51391_1089806
362 Ga0006562J51391_1103169
363 Ga0070663_100411578
364 Ga0068853_100027198
365 Ga0081455_10043591
366 Ga0070715_10134855
367 Ga0099826_10064115
368 Ga0105251_10016691
369 Ga0105243_10110112
370 Ga0105243_10157702
371 Ga0105246_10003995
372 Ga0105246_10308495
373 Ga0157372_10285609
374 Ga0182008_10001729
375 Ga0182007_10001419
376 Ga0183367_1002
377 Ga0183367_1006
378 Ga0207647_10002453
379 Ga0207691_10245474
380 Ga0207639_10020774
381 Ga0209371_1028160
382 Ga0307517_10012094
383 Ga0307515_10006210
384 Ga0307515_10083607
385 Ga0307515_10098068
386 Ga0268256_1024347
387 Ga0307511_10000477
388 Ga0307511_10086018
389 Ga0307512_10002642
390 Ga0307512_10003793
391 Ga0307512_10096624
392 Ga0307513_10058769
393 Ga0307513_10088634
394 Ga0307509_10008150
395 Ga0307509_10044789
396 Ga0307509_10122577
397 Ga0307508_10020472
398 Ga0307508_10047748
399 Ga0307508_10077029
400 Ga0307514_10001878
401 Ga0307514_10080659
402 Ga0307514_10087962
403 Ga0307516_10004046
404 Ga0307516_10114600
405 Ga0307518_10011518
406 Ga0307518_10167530
407 Ga0307507_10092587
408 Ga0307507_10191013
409 Ga0307510_10024273
410 Ga0307510_10030464
411 Ga0307510_10055437
412 Ga0395898_0011283
413 Ga0395898_0015191
414 Ga0395898_0079943
415 Ga0439436_0000632
416 Ga0439436_0002753
417 Ga0439439_0003768
418 Ga0451837_1722638
419 Ga0451853_0112257
420 Ga0451853_0218760
421 Ga0451853_0490633
422 Ga0451853_2698293
423 Ga0439433_0000094
424 Ga0439433_0026077
425 Ga0439442_021605
426 Ga0439448_0003898
427 Ga0439432_047883
428 Ga0439449_0028020
429 Ga0439455_0017103
430 Ga0439457_000331
431 Ga0439457_000589
432 Ga0439457_001176
433 Ga0439457_029472
434 Ga0439462_0002907
435 Ga0439462_0022728
436 Ga0450894_000783
437 Ga0450896_000852
438 Ga0450898_000377
439 Ga0450903_000242
440 Ga0450903_005091
441 Ga0450906_000369
442 Ga0439458_0000349
443 Ga0450908_002142
444 Ga0466969_0173423
445 Ga0466972_0027011
446 Ga0466972_0036060
447 Ga0466965_0002563
448 Ga0466966_0001457
449 Ga0466961_0004786
450 Ga0466961_0004829
451 Ga0466963_0000032
452 Ga0466963_0000410
453 Ga0466963_0075098
454 Ga0466964_0011903
455 Ga0466964_0024243
456 Ga0466971_0099342
457 Ga0466968_0059114
458 Ga0466970_0006238
459 Ga0466970_0020119
460 Ga0466957_0000143
461 Ga0466957_0004065
462 Ga0466959_0012770
463 Ga0466959_0014474
464 Ga0466958_0004959
465 Ga0466967_0002249
466 Ga0466967_0025682
467 Ga0466967_0027546
468 Ga0466967_0418043
469 Ga0495617_005554
470 Ga0495627_034593
471 Ga0495592_0015018
472 Ga0495592_0032568
473 Ga0495603_0005714
474 Ga0495603_0009196
475 Ga0495603_0013251
476 Ga0495603_0015393
477 Ga0495603_0164451
478 Ga0495629_0019186
479 Ga0495629_0032750
480 Ga0495629_0045195
481 Ga0495629_0060315
482 Ga0495629_0230236
483 Ga0495638_0044274
484 Ga0495638_0177933
485 Ga0495651_0007078
486 Ga0495580_0329774
487 Ga0495582_0050711
488 Ga0495582_0112676
489 Ga0495605_0018620
490 Ga0495605_0019482
491 Ga0495639_0024626
492 Ga0495662_0000971
493 Ga0495662_0052175
494 Ga0495664_0000582
495 Ga0495585_0089093
496 Ga0495585_0204243
497 Ga0495594_0093370
498 Ga0495594_0104624
499 Ga0495607_0006963
500 Ga0495583_0019906
501 Ga0495583_0140043
502 Ga0495606_0023099
503 Ga0495606_0040455
504 Ga0495608_0285626
505 Ga0495610_0020977
506 Ga0495616_0032993
507 Ga0495618_0021841
508 Ga0495620_0026708
509 Ga0495620_0030124
510 Ga0495620_0059087
511 Ga0495628_0049540
512 Ga0495628_0127486
513 Ga0495628_0206303
514 Ga0495628_0310999
515 Ga0495630_0013123
516 Ga0495630_0363437
517 Ga0495631_0045017
518 Ga0495643_0013471
519 Ga0495643_0019318
520 Ga0495648_0015988
521 Ga0495648_0018266
522 Ga0495648_0139722
523 Ga0495666_0030475
524 Ga0495666_0130872
525 Ga0495666_0214486
526 Ga0495652_0099349
527 Ga0495652_0117167
528 Ga0495654_0018086
529 Ga0495640_0011847
530 Ga0495640_0032640
531 Ga0495587_0001380
532 Ga0495609_0004156
533 Ga0495622_0008492
534 Ga0495622_0020724
535 Ga0495633_0023919
536 Ga0495633_0062340
537 Ga0495667_0044641
538 Ga0495667_0101757
539 Ga0495667_0204733
540 Ga0495656_0044112
541 Ga0495668_0045330
542 Ga0495668_0239525
543 Ga0495634_0000830
544 Ga0495634_0189072
545 Ga0495611_0024473
546 Ga0495625_0004627
547 Ga0495625_0104854
548 Ga0495625_0359389
549 Ga0495635_0000558
550 Ga0495635_0151926
551 Ga0495661_0109574
552 Ga0495588_0016516
553 Ga0495588_0018528
554 Ga0495588_0084235
555 Ga0495657_0001523
556 Ga0495657_0007990
557 Ga0495657_0017328
558 Ga0495599_0224211
559 Ga0495646_0000540
560 Ga0495646_0197770
561 Ga0495658_0037891
562 Ga0495613_0038773
563 Ga0495613_0082772
564 Ga0495613_0098025
565 Ga0495613_0117467
566 Ga0495613_0284477
567 Ga0495624_0160912
568 Ga0495671_0002279
569 Ga0495671_0044726
570 Ga0495671_0201386
571 Ga0495649_0018195
572 Ga0495649_0028280
573 Ga0495649_0094559
574 Ga0495649_0121751
575 Ga0495649_0156798
576 Ga0495589_0024289
577 Ga0495589_0042506
578 Ga0495589_0044494
579 Ga0495589_0072441
580 Ga0495589_0078999
581 Ga0495600_0003102
582 Ga0495660_0009710
583 Ga0495660_0047024
584 Ga0495660_0048411
585 Ga0495581_0022402
586 Ga0495604_0045793
587 Ga0495604_0071590
588 Ga0495604_0198464
589 Ga0495636_0001012
590 Ga0495636_0007224
591 Ga0495636_0015962
592 Ga0495636_0020355
593 Ga0495636_0185000
594 Ga0495674_0043595
595 Ga0495674_0256922
596 Ga0495674_0270654
597 Ga0495676_0004326
598 Ga0495676_0034793
599 Ga0495676_0050147
600 Ga0495680_0006988
601 Ga0495680_0014234
602 Ga0495687_002174
603 Ga0495687_005273
604 Ga0495687_025534
605 Ga0495687_028289
606 Ga0495677_0020737
607 Ga0495677_0027718
608 Ga0495685_004073
609 Ga0495685_019210
610 Ga0495685_037674
611 Ga0495685_086686
612 Ga0495681_0007136
613 Ga0495681_0031560
614 Ga0495684_0164740
615 Ga0495686_0015853
616 Ga0495686_0025884
617 Ga0495593_0004443
618 Ga0495593_0076105
619 Ga0495593_0130170
620 Ga0495602_0030999
621 Ga0495614_0009981
622 Ga0495614_0121617
623 Ga0495626_0031365
624 Ga0495626_0049248
625 Ga0495678_009605
626 Ga0495678_029427
627 Ga0495682_0038904
628 Ga0501033_0008478
629 Ga0501033_0016454
630 Ga0501034_0050442
631 Ga0501034_0099733
632 Ga0501036_0033718
633 Ga0501036_0288011
634 Ga0501038_0005410
635 Ga0501038_0007034
636 Ga0501043_0085245
637 Ga0501047_0133894
638 Ga0501070_0151389
639 Ga0501074_0418766
640 Ga0501080_0044256
641 Ga0501035_0018966
642 Ga0501035_0148255
643 Ga0501044_0084080
644 Ga0501044_0160717
645 Ga0501044_0161201
646 Ga0501045_0188596
647 nmdc:mga03n38_3737_c1
648 nmdc:mga06z11_1688_c1
649 Ga0500644_0005715
650 Ga0500640_017768
651 Ga0500553_022551
652 Ga0500572_007050
653 Ga0466962_0000267
654 Ga0466962_0008612
655 2862511530
656 2547407005
657 2585319752
658 2616697637
659 2644263277
660 2644436581
661 2644625583
662 2644633190
663 2784588039
664 2785341771
665 2785344038
666 2785368809
667 2785370874
668 2786669908
669 2808841474
670 2808920040
671 2809231639
672 2812358772
673 2812481067
674 2852641938
675 2862287101
676 2862287903
677 2862386514
678 2862389459
679 2863405307
680 2863411460
681 2873156417
682 2912720667
683 2912724828
684 2919473521
685 2946067105
686 2947230137
687 2954003335
688 2954004845
689 2954386851
690 2954676337
691 2954687831
692 2954697670
693 2954704546
694 3006496337
695 3006498912
696 8008559769
697 8008566653
698 8008579377
699 8023631045
700 8056830246

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14472

DUF4429

Domain of unknown function (DUF4429)

7

101

0.99

PF14472

DUF4429

Domain of unknown function (DUF4429)

135

222

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p22-assembly1.cif.gz_B structure of the yeast escrt-i heterotetramer core 0.9723 258 295
5j2l-assembly1.cif.gz_A de novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity 0.9085 255 295
1ffk-assembly1.cif.gz_M crystal structure of the large ribosomal subunit from haloarcula marismortui at 2.4 angstrom resolution 0.7867 254 295
1k8a-assembly1.cif.gz_Q co-crystal structure of carbomycin a bound to the 50s ribosomal subunit of haloarcula marismortui 0.7825 254 295
5i5h-assembly1.cif.gz_A ecoli global domain 245-586 0.7703 127 167
ID Description Score Start End Superfamily
2nn4A00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;YqgQ-like 0.9898 259 295 1.10.287.760
2nn4B00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;YqgQ-like 0.9862 259 295 1.10.287.760
2p22B00 Mainly Alpha;Up-down Bundle;de novo design (two linked rop proteins);Vps28 N-terminal domain 0.9723 258 295 1.20.1440.200
af_X1WEV5_108_185_1.10.287.660 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9644 258 294 1.10.287.660
af_O88951_8_64_1.10.287.650 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;L27 domain 0.9335 261 292 1.10.287.650
ID Description Score Start End GO Terms
AF-A0A656TRL4-F1-model_v4 deleted 0.991 1 111
AF-A0A429EGT3-F1-model_v4 Tat pathway signal sequence domain protein 0.9847 1 232
AF-A0A0C2AVK0-F1-model_v4 deleted 0.9741 1 228
AF-A0A656TRL4-F1-model_v4 deleted 0.9736 1 111
AF-A0A429EGT3-F1-model_v4 Tat pathway signal sequence domain protein 0.9722 1 232

Map