F417003

General Info

Members Datasets Scaffolds Average Seq Length
347 162 243 394

Family's Representative Sequence

Representative Sequence 3300005289|Ga0065704_10000744|Ga0065704_100007442
Length 390
Sequence MPLTELQIKKAKPTEKPYTLSDGLGLSLLIEPNGSKAWRFRYRFDGKPKMLSLGTYEHVSLADARQRRDESRRLVASGVNPSTLRKEQKAAKILSATNTFEAITREWYEHRYDRWSASYREEMMDTFEKDVFPYLGFRPIAEIKPLELLAMLRQVESRGATEKARKVRQRCGEVFRYAIITGRAEYNPAPDLASAMKPHKANNYAHLAVHELPEFLSELNAYTGSVITKIATQLLILTGLRPGEVRRAQWSEIDMENKVWEVPVEHMKMGRPHLVPLSKQAISLLEQIRIVTGRYELIFPGRDFRKPISEASINQVMKRIGYNGRATGHGFRHTMSTILHEKGYNSAWIELQLAHVDKNSIRGTYNHALYLDGRREMMQWYADYMDSFGI

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
3 2506520008 Serratia plymuthica AS12 Isolate Unclassified
4 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
5 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
6 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
7 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
8 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
9 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
10 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
11 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
12 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
13 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
14 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
15 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
16 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
17 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
18 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
19 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
20 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
21 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
22 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
23 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
24 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
25 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
26 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
27 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
28 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
29 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
30 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
31 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
32 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
33 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
34 2602042066 Enterobacter sp. NFIX45 Isolate Rhizoplane
35 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
36 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
37 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
38 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
39 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
40 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
41 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
42 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
43 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
44 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
45 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
46 2648501693 Pantoea ananatis B1-9 Isolate Rhizosphere
47 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
48 2667528172 Enterobacteriaceae bacterium NFIX31 Isolate Rhizoplane
49 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
50 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
51 2681812866 Enterobacter asburiae NFIX55 Isolate Rhizoplane
52 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
53 2751185917 Enterobacter sp. HK169 Isolate Unclassified
54 2765235842 Enterobacter ludwigii AA4 Isolate Unclassified
55 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
56 2775507074 Klebsiella sp. D5A Isolate Unclassified
57 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
58 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
59 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
60 2821118458 Enterobacter asburiae 609 Isolate Unclassified
61 2823373977 Enterobacter ludwigii NCR3 Isolate Rhizosphere
62 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
63 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
64 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
65 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
66 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
67 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
68 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
69 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
70 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
71 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
72 2919150387 Rahnella aceris 1817 Isolate Unclassified
73 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
74 2927143783 Rahnella sp. 2050 Isolate Unclassified
75 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
76 2932406140 Serratia sp. 2723 Isolate Rhizosphere
77 2935625433 Kosakonia sp. 1610 Isolate Rhizosphere
78 2939573065 Citrobacter sp. 506 Isolate Rhizosphere
79 2939577877 Serratia sp. 509 Isolate Rhizosphere
80 2945874760 Phytobacter diazotrophicus UAEU22 Isolate Rhizosphere
81 2984494565 Pantoea ananatis SORGH_AS197 Isolate Aerial Root
82 2990261002 Pantoea ananatis SORGH_AS213 Isolate Aerial Root
83 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
84 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
85 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
86 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
87 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
88 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
89 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
90 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
91 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
92 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
93 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
94 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
95 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
96 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
97 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
98 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
99 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
100 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
101 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
102 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
103 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
104 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
105 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
106 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
107 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
108 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
109 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
110 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
111 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
112 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
117 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
118 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
119 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
121 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
122 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
128 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
129 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
130 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
131 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
132 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
133 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
134 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
135 3300044669 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E Metagenome Unclassified
136 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
137 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
138 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
139 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
140 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
141 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
142 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
143 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
150 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 640753048 Serratia proteamaculans 568 Isolate Endosphere
159 8004592986 Serratia sp. S119 Isolate Unclassified
160 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
161 8016733728 Pantoea sp. SORGH_AS 659 Isolate Unclassified
162 8054849141 Dryocola clanedunensis H11S18 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.03
Metatranscriptomes 0
Isolates 29.97

Biome Distribution

Category Percentage (%)
Aerial Root 1.15
Bulb 0
Endosphere 6.34
Nodule 3.17
Rhizoplane 14.99
Rhizosphere 36.31
Stem 0
Stem Tuber 2.02
Unclassified 36.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1836092 2162886007 Bacteria 12329
2 SwRhRL2b_contig_580955 2162886007 Bacteria 4140
3 JGI25162J39368_1000002 3300002737 Bacteria 663004
4 JGI25164J39214_1000066 3300002772 Bacteria 106367
5 Ga0055538_1000003 3300003751 Bacteria 663004
6 Ga0055539_1000003 3300003752 Bacteria 663004
7 Ga0055533_1000005 3300003756 Bacteria 663004
8 Ga0055525_1000005 3300003759 Bacteria 663004
9 Ga0055541_1000003 3300003841 Bacteria 663004
10 Ga0058692_1000043 3300003856 Bacteria 119173
11 Ga0058692_1000373 3300003856 Bacteria 21424
12 Ga0058692_1000500 3300003856 Bacteria 17427
13 Ga0065704_10000744 3300005289 Bacteria 13052
14 Ga0065704_10073455 3300005289 Bacteria 7146
15 Ga0070665_100085235 3300005548 Bacteria 3165
16 Ga0068857_100000071 3300005577 Bacteria 57954
17 Ga0075364_10063342 3300006051 Bacteria 2427
18 Ga0079104_1000619 3300006946 Bacteria 34827
19 Ga0079104_1000776 3300006946 Bacteria 27238
20 Ga0079104_1000880 3300006946 Bacteria 24665
21 Ga0079104_1002766 3300006946 Bacteria 8886
22 Ga0079104_1004988 3300006946 Bacteria 5452
23 Ga0079104_1015866 3300006946 Bacteria 2218
24 Ga0105251_10001173 3300009011 Bacteria 22746
25 Ga0105251_10003038 3300009011 Bacteria 12494
26 Ga0105251_10003457 3300009011 Bacteria 11460
27 Ga0105251_10004866 3300009011 Bacteria 8963
28 Ga0105251_10012283 3300009011 Bacteria 4853
29 Ga0105251_10036286 3300009011 Bacteria 2427
30 Ga0105251_10040446 3300009011 Bacteria 2273
31 Ga0105244_10001052 3300009036 Bacteria 23083
32 Ga0105244_10001096 3300009036 Bacteria 22539
33 Ga0105244_10002345 3300009036 Bacteria 14374
34 Ga0105244_10003365 3300009036 Bacteria 11455
35 Ga0105244_10003787 3300009036 Bacteria 10672
36 Ga0105244_10017549 3300009036 Bacteria 4041
37 Ga0105244_10057595 3300009036 Bacteria 1963
38 Ga0105250_10000021 3300009092 Bacteria 239960
39 Ga0105250_10000159 3300009092 Bacteria 58535
40 Ga0105250_10000343 3300009092 Bacteria 35731
41 Ga0105250_10001176 3300009092 Bacteria 14693
42 Ga0105250_10001620 3300009092 Bacteria 12039
43 Ga0105250_10002201 3300009092 Bacteria 9941
44 Ga0105250_10007367 3300009092 Bacteria 4730
45 Ga0105250_10008463 3300009092 Bacteria 4368
46 Ga0105250_10042498 3300009092 Bacteria 1821
47 Ga0105247_10000720 3300009101 Bacteria 25749
48 Ga0157373_10000257 3300013100 Bacteria 43138
49 Ga0157373_10001030 3300013100 Bacteria 21489
50 Ga0157373_10020863 3300013100 Bacteria 4756
51 Ga0157373_10023371 3300013100 Bacteria 4483
52 Ga0157371_10001022 3300013102 Bacteria 30685
53 Ga0157371_10014999 3300013102 Bacteria 5827
54 Ga0157371_10050892 3300013102 Bacteria 2944
55 Ga0157370_10268205 3300013104 Bacteria 1577
56 Ga0157369_10001247 3300013105 Bacteria 31703
57 Ga0163162_10040331 3300013306 Bacteria 4669
58 Ga0157372_10028119 3300013307 Bacteria 6134
59 Ga0183366_1001 3300015679 Bacteria 2743932
60 Ga0183370_1001 3300015680 Bacteria 2743932
61 Ga0183369_1001 3300015685 Bacteria 2743932
62 Ga0183368_1001 3300015687 Bacteria 2743932
63 Ga0213876_10000025 3300021384 Bacteria 236747
64 Ga0209760_100005 3300025207 Bacteria 238315
65 Ga0209784_100001 3300025224 Bacteria 3600592
66 Ga0209566_100001 3300025225 Bacteria 3600765
67 Ga0209674_100002 3300025226 Bacteria 3600592
68 Ga0209563_100002 3300025230 Bacteria 2045675
69 Ga0207427_100009 3300025231 Bacteria 663036
70 Ga0209437_100001 3300025233 Bacteria 2045675
71 Ga0207425_1006808 3300025245 Bacteria 3088
72 Ga0209677_100002 3300025253 Bacteria 2045675
73 Ga0209129_1000021 3300025258 Bacteria 445018
74 Ga0209233_1001826 3300025261 Bacteria 8169
75 Ga0207696_1000046 3300025711 Bacteria 291327
76 Ga0207696_1000061 3300025711 Bacteria 241730
77 Ga0207696_1000067 3300025711 Bacteria 228478
78 Ga0207696_1000944 3300025711 Bacteria 17786
79 Ga0207696_1001206 3300025711 Bacteria 14701
80 Ga0207696_1001357 3300025711 Bacteria 13442
81 Ga0207696_1001584 3300025711 Bacteria 12047
82 Ga0207696_1001983 3300025711 Bacteria 10382
83 Ga0207696_1002024 3300025711 Bacteria 10260
84 Ga0207655_1000050 3300025728 Bacteria 294923
85 Ga0207655_1000147 3300025728 Bacteria 132140
86 Ga0207655_1001263 3300025728 Bacteria 24122
87 Ga0207655_1001404 3300025728 Bacteria 22435
88 Ga0207655_1001581 3300025728 Bacteria 20446
89 Ga0207655_1002788 3300025728 Bacteria 13581
90 Ga0207655_1019305 3300025728 Bacteria 3570
91 Ga0207713_1000023 3300025735 Bacteria 346097
92 Ga0207713_1000148 3300025735 Bacteria 105384
93 Ga0207713_1002410 3300025735 Bacteria 13652
94 Ga0207713_1013410 3300025735 Bacteria 4320
95 Ga0207713_1030734 3300025735 Bacteria 2388
96 Ga0207713_1032216 3300025735 Bacteria 2305
97 Ga0207710_10000024 3300025900 Bacteria 319633
98 Ga0207674_10000067 3300026116 Bacteria 107803
99 Ga0209281_1000378 3300027111 Bacteria 70786
100 Ga0209281_1000465 3300027111 Bacteria 57106
101 Ga0209281_1000811 3300027111 Bacteria 28502
102 Ga0209281_1002250 3300027111 Bacteria 8199
103 Ga0209281_1003113 3300027111 Bacteria 5777
104 Ga0209371_1000050 3300027312 Bacteria 278645
105 Ga0209371_1000334 3300027312 Bacteria 51398
106 Ga0209371_1000599 3300027312 Bacteria 32316
107 Ga0209371_1000833 3300027312 Bacteria 25364
108 Ga0209371_1017652 3300027312 Bacteria 1842
109 Ga0268256_1000017 3300030500 Bacteria 600718
110 Ga0268256_1000323 3300030500 Bacteria 47340
111 Ga0268256_1000518 3300030500 Bacteria 32316
112 Ga0268256_1000621 3300030500 Bacteria 27689
113 Ga0268256_1019400 3300030500 Bacteria 1863
114 Ga0268256_1019663 3300030500 Bacteria 1842
115 Ga0436365_1279401 3300039437 Bacteria 294819
116 Ga0439438_004684 3300041405 Bacteria 5191
117 Ga0439466_0003273 3300041411 Bacteria 6308
118 Ga0439432_017304 3300042006 Bacteria 2420
119 Ga0439452_000017 3300042010 Bacteria 324897
120 Ga0439452_000171 3300042010 Bacteria 48184
121 Ga0466981_0000006 3300044669 Bacteria 157389
122 Ga0466981_0000015 3300044669 Bacteria 106046
123 Ga0495617_027788 3300046452 Bacteria 1902
124 Ga0495591_000126 3300046458 Bacteria 83383
125 Ga0495591_000257 3300046458 Bacteria 50572
126 Ga0495605_0002654 3300046474 Bacteria 10946
127 Ga0495654_0000040 3300046530 Bacteria 184580
128 Ga0495654_0003796 3300046530 Bacteria 9148
129 Ga0495597_0001536 3300046542 Bacteria 16398
130 Ga0495589_0000002 3300046794 Bacteria 758846
131 Ga0495589_0000050 3300046794 Bacteria 116034
132 Ga0495679_000005 3300047446 Bacteria 455007
133 Ga0495673_0000137 3300047469 Bacteria 134484
134 Ga0495673_0000256 3300047469 Bacteria 74157
135 Ga0496101_0000063 3300048904 Bacteria 125670
136 Ga0496104_0027799 3300048907 Bacteria 5236
137 Ga0496116_0000320 3300048919 Bacteria 78683
138 Ga0496116_0000411 3300048919 Bacteria 61137
139 Ga0496116_0000505 3300048919 Bacteria 53281
140 Ga0496116_0010957 3300048919 Bacteria 7553
141 Ga0496116_0023954 3300048919 Bacteria 4528
142 Ga0496117_0001176 3300048920 Bacteria 39348
143 Ga0496117_0001450 3300048920 Bacteria 34200
144 Ga0496117_0001617 3300048920 Bacteria 31824
145 Ga0496117_0001802 3300048920 Bacteria 29113
146 Ga0496117_0002360 3300048920 Bacteria 24125
147 Ga0496117_0005619 3300048920 Bacteria 13097
148 Ga0496117_0013913 3300048920 Bacteria 6974
149 Ga0496117_0016835 3300048920 Bacteria 6142
150 Ga0496117_0017737 3300048920 Bacteria 5934
151 Ga0496117_0028843 3300048920 Bacteria 4290
152 Ga0496117_0065143 3300048920 Bacteria 2479
153 Ga0496117_0103857 3300048920 Bacteria 1790
154 Ga0496117_0124948 3300048920 Bacteria 1572
155 Ga0496118_0001323 3300048921 Bacteria 37559
156 Ga0496118_0002806 3300048921 Bacteria 22814
157 Ga0496118_0003820 3300048921 Bacteria 18555
158 Ga0496118_0004067 3300048921 Bacteria 17732
159 Ga0496118_0006074 3300048921 Bacteria 13442
160 Ga0496118_0006312 3300048921 Bacteria 13096
161 Ga0496118_0006322 3300048921 Bacteria 13086
162 Ga0496118_0008504 3300048921 Bacteria 10596
163 Ga0496118_0009121 3300048921 Bacteria 10093
164 Ga0496118_0009883 3300048921 Bacteria 9539
165 Ga0496118_0011522 3300048921 Bacteria 8619
166 Ga0496119_0000043 3300048922 Bacteria 192373
167 Ga0496119_0001050 3300048922 Bacteria 35347
168 Ga0496119_0001955 3300048922 Bacteria 23451
169 Ga0496119_0002805 3300048922 Bacteria 18650
170 Ga0496119_0003261 3300048922 Bacteria 16964
171 Ga0496119_0004983 3300048922 Bacteria 12959
172 Ga0496119_0005565 3300048922 Bacteria 11987
173 Ga0496119_0005593 3300048922 Bacteria 11951
174 Ga0496119_0006127 3300048922 Bacteria 11253
175 Ga0496119_0017031 3300048922 Bacteria 5493
176 Ga0496119_0018402 3300048922 Bacteria 5200
177 Ga0496119_0022516 3300048922 Bacteria 4506
178 Ga0496119_0070990 3300048922 Bacteria 2040
179 Ga0496120_0000009 3300048923 Bacteria 386727
180 Ga0496120_0000460 3300048923 Bacteria 64148
181 Ga0496120_0000508 3300048923 Bacteria 60613
182 Ga0496120_0001096 3300048923 Bacteria 35357
183 Ga0496120_0001212 3300048923 Bacteria 32597
184 Ga0496120_0001554 3300048923 Bacteria 26858
185 Ga0496120_0003172 3300048923 Bacteria 15319
186 Ga0496120_0003549 3300048923 Bacteria 14095
187 Ga0496120_0004318 3300048923 Bacteria 12027
188 Ga0496120_0004414 3300048923 Bacteria 11805
189 Ga0496120_0062886 3300048923 Bacteria 2066
190 Ga0496121_0002887 3300048924 Bacteria 25276
191 Ga0496121_0004257 3300048924 Bacteria 19444
192 Ga0496121_0007989 3300048924 Bacteria 12633
193 Ga0496121_0013050 3300048924 Bacteria 8973
194 Ga0496121_0018297 3300048924 Bacteria 7075
195 Ga0496121_0022994 3300048924 Bacteria 6022
196 Ga0496121_0027056 3300048924 Bacteria 5378
197 Ga0496121_0035378 3300048924 Bacteria 4478
198 Ga0496122_0000145 3300048925 Bacteria 165864
199 Ga0496122_0001845 3300048925 Bacteria 32305
200 Ga0496122_0003204 3300048925 Bacteria 21806
201 Ga0496122_0006580 3300048925 Bacteria 13269
202 Ga0496122_0025526 3300048925 Bacteria 5128
203 Ga0496122_0030741 3300048925 Bacteria 4490
204 Ga0496122_0151299 3300048925 Bacteria 1432
205 Ga0496123_0000171 3300048926 Bacteria 130780
206 Ga0496123_0000824 3300048926 Bacteria 49758
207 Ga0496123_0005955 3300048926 Bacteria 12008
208 Ga0496123_0008177 3300048926 Bacteria 9651
209 Ga0496123_0010442 3300048926 Bacteria 8207
210 Ga0496123_0015480 3300048926 Bacteria 6253
211 Ga0496123_0075985 3300048926 Bacteria 2070
212 Ga0496124_0003565 3300048927 Bacteria 18923
213 Ga0496124_0004047 3300048927 Bacteria 17393
214 Ga0496124_0006335 3300048927 Bacteria 12917
215 Ga0496124_0007339 3300048927 Bacteria 11744
216 Ga0496124_0008160 3300048927 Bacteria 10990
217 Ga0496124_0011397 3300048927 Bacteria 8887
218 Ga0496124_0014250 3300048927 Bacteria 7700
219 Ga0496124_0015090 3300048927 Bacteria 7427
220 Ga0496124_0015688 3300048927 Bacteria 7246
221 Ga0496124_0022569 3300048927 Bacteria 5764
222 Ga0496124_0052144 3300048927 Bacteria 3477
223 Ga0496124_0125816 3300048927 Bacteria 2042
224 Ga0496125_0000551 3300048928 Bacteria 64613
225 Ga0496125_0001164 3300048928 Bacteria 39824
226 Ga0496125_0002987 3300048928 Bacteria 21204
227 Ga0496125_0007360 3300048928 Bacteria 11721
228 Ga0496125_0008204 3300048928 Bacteria 10985
229 Ga0496125_0014024 3300048928 Bacteria 7835
230 Ga0496125_0014863 3300048928 Bacteria 7559
231 Ga0496125_0016505 3300048928 Bacteria 7086
232 Ga0496126_0002549 3300048929 Bacteria 24387
233 Ga0496126_0002598 3300048929 Bacteria 24076
234 Ga0496126_0003906 3300048929 Bacteria 18315
235 Ga0496126_0004428 3300048929 Bacteria 16808
236 Ga0496126_0004652 3300048929 Bacteria 16227
237 Ga0496126_0005781 3300048929 Bacteria 13984
238 Ga0496126_0007202 3300048929 Bacteria 12241
239 Ga0496126_0008291 3300048929 Bacteria 11223
240 Ga0496126_0034532 3300048929 Bacteria 4749
241 Ga0496126_0044547 3300048929 Bacteria 4084
242 Ga0496126_0064158 3300048929 Bacteria 3291
243 nmdc:mga00v17_90114_c1 3300050491 Bacteria 1925

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2667528172 2671101062 334
2 3300006946 Ga0079104_1000776 Ga0079104_100077619 341
3 3300027111 Ga0209281_1000378 Ga0209281_100037857 341
4 3300048924 Ga0496121_0018297 Ga0496121_0018297_439_1506 341
5 3300048925 Ga0496122_0151299 Ga0496122_0151299_314_1420 349
6 3300048926 Ga0496123_0075985 Ga0496123_0075985_62_1168 349
7 3300048924 Ga0496121_0027056 Ga0496121_0027056_289_1431 358
8 iso_pu_bacteria 2846540461 2846540923 361
9 3300046452 Ga0495617_027788 Ga0495617_027788_588_1766 363
10 3300048926 Ga0496123_0008177 Ga0496123_0008177_1472_2656 364
11 iso_pu_bacteria 2923634449 2923635947 364
12 3300048928 Ga0496125_0000551 Ga0496125_0000551_124_1227 367
13 3300015679 Ga0183366_1001 Ga0183366_100142 368
14 3300015680 Ga0183370_1001 Ga0183370_100142 368
15 3300015685 Ga0183369_1001 Ga0183369_100142 368
16 3300015687 Ga0183368_1001 Ga0183368_100142 368
17 3300046794 Ga0495589_0000050 Ga0495589_0000050_44285_45451 368
18 3300048920 Ga0496117_0065143 Ga0496117_0065143_300_1496 368
19 3300048928 Ga0496125_0002987 Ga0496125_0002987_19900_21096 368
20 3300048929 Ga0496126_0004652 Ga0496126_0004652_194_1390 368
21 3300009011 Ga0105251_10040446 Ga0105251_100404462 369
22 3300009036 Ga0105244_10003365 Ga0105244_100033655 369
23 3300009036 Ga0105244_10017549 Ga0105244_100175494 369
24 3300009092 Ga0105250_10042498 Ga0105250_100424982 369
25 3300013102 Ga0157371_10050892 Ga0157371_100508921 369
26 3300025711 Ga0207696_1001983 Ga0207696_100198311 369
27 3300025728 Ga0207655_1002788 Ga0207655_10027887 369
28 3300025728 Ga0207655_1019305 Ga0207655_10193051 369
29 3300025735 Ga0207713_1030734 Ga0207713_10307342 369
30 3300025735 Ga0207713_1032216 Ga0207713_10322163 369
31 3300048921 Ga0496118_0009121 Ga0496118_0009121_282_1478 369
32 3300048922 Ga0496119_0018402 Ga0496119_0018402_1045_2241 369
33 3300048923 Ga0496120_0000508 Ga0496120_0000508_2960_4156 369
34 3300048927 Ga0496124_0015688 Ga0496124_0015688_1039_2250 369
35 3300048927 Ga0496124_0125816 Ga0496124_0125816_154_1359 369
36 3300048928 Ga0496125_0014024 Ga0496125_0014024_6598_7794 369
37 2162886007 SwRhRL2b_contig_580955 SwRhRL2b_0110.00003930 370
38 3300005289 Ga0065704_10073455 Ga0065704_100734555 370
39 iso_pu_bacteria 2855195626 2855197978 372
40 3300009036 Ga0105244_10002345 Ga0105244_1000234511 373
41 3300025728 Ga0207655_1000147 Ga0207655_1000147111 373
42 3300009011 Ga0105251_10001173 Ga0105251_1000117316 374
43 3300025711 Ga0207696_1000046 Ga0207696_1000046175 374
44 3300025735 Ga0207713_1000148 Ga0207713_100014892 374
45 3300048922 Ga0496119_0002805 Ga0496119_0002805_13856_15049 374
46 3300048923 Ga0496120_0001212 Ga0496120_0001212_11920_13113 374
47 3300048927 Ga0496124_0052144 Ga0496124_0052144_2089_3255 379
48 iso_pu_bacteria 2927833300 2927835357 380
49 3300005548 Ga0070665_100085235 Ga0070665_1000852352 382
50 3300013104 Ga0157370_10268205 Ga0157370_102682051 383
51 iso_pu_bacteria 2537561728 2538425453 383
52 iso_pu_bacteria 2667528172 2671102068 383
53 iso_pu_bacteria 2855195626 2855198472 383
54 iso_pu_bacteria 2602042066 2603697921 384
55 iso_pu_bacteria 2791355010 2792312155 384
56 iso_pu_bacteria 640753048 640935594 384
57 iso_pu_bacteria 8015394850 8015398974 384
58 3300013307 Ga0157372_10028119 Ga0157372_100281192 385
59 3300048929 Ga0496126_0034532 Ga0496126_0034532_282_1442 385
60 iso_pu_bacteria 2671180115 2671585189 385
61 iso_pu_bacteria 2823373977 2823377895 385
62 iso_pu_bacteria 2888366609 2888366672 385
63 iso_pu_bacteria 2904474040 2904476099 385
64 iso_pu_bacteria 2919150387 2919152268 385
65 iso_pu_bacteria 2927143783 2927144937 385
66 iso_pu_bacteria 2939573065 2939575418 385
67 iso_pu_bacteria 8016733728 8016736842 385
68 iso_pu_bacteria 8054849141 8054850836 385
69 3300048929 Ga0496126_0008291 Ga0496126_0008291_9778_10941 386
70 3300048929 Ga0496126_0044547 Ga0496126_0044547_181_1377 386
71 iso_pu_bacteria 2506520007 2506580190 386
72 iso_pu_bacteria 2506520008 2506585329 386
73 iso_pu_bacteria 2508501071 2508850021 386
74 iso_pu_bacteria 2537561728 2538425501 386
75 iso_pu_bacteria 2537561728 2538428133 386
76 iso_pu_bacteria 2585427592 2585831237 386
77 iso_pu_bacteria 2600255254 2601525321 386
78 iso_pu_bacteria 2600255255 2601530509 386
79 iso_pu_bacteria 2600255256 2601531817 386
80 iso_pu_bacteria 2600255257 2601537189 386
81 iso_pu_bacteria 2600255257 2601540043 386
82 iso_pu_bacteria 2600255280 2601616887 386
83 iso_pu_bacteria 2600255281 2601621765 386
84 iso_pu_bacteria 2600255287 2601643745 386
85 iso_pu_bacteria 2600255288 2601651219 386
86 iso_pu_bacteria 2600255289 2601655089 386
87 iso_pu_bacteria 2600255290 2601661736 386
88 iso_pu_bacteria 2600255291 2601663570 386
89 iso_pu_bacteria 2600255298 2601696549 386
90 iso_pu_bacteria 2600255299 2601701202 386
91 iso_pu_bacteria 2600255300 2601709540 386
92 iso_pu_bacteria 2600255301 2601714073 386
93 iso_pu_bacteria 2600255302 2601718649 386
94 iso_pu_bacteria 2600255303 2601721573 386
95 iso_pu_bacteria 2600255304 2601728119 386
96 iso_pu_bacteria 2600255305 2601733596 386
97 iso_pu_bacteria 2600255306 2601738944 386
98 iso_pu_bacteria 2600255307 2601744458 386
99 iso_pu_bacteria 2600255309 2601754992 386
100 iso_pu_bacteria 2600255310 2601755535 386
101 iso_pu_bacteria 2600255310 2601758666 386
102 iso_pu_bacteria 2600255311 2601760902 386
103 iso_pu_bacteria 2600255311 2601764780 386
104 iso_pu_bacteria 2600255392 2602022257 386
105 iso_pu_bacteria 2602042052 2603660957 386
106 iso_pu_bacteria 2602042053 2603666231 386
107 iso_pu_bacteria 2602042067 2603704556 386
108 iso_pu_bacteria 2602042103 2603840710 386
109 iso_pu_bacteria 2602042104 2603845628 386
110 iso_pu_bacteria 2602042105 2603850702 386
111 iso_pu_bacteria 2602042106 2603855927 386
112 iso_pu_bacteria 2602042110 2603873508 386
113 iso_pu_bacteria 2602042111 2603877044 386
114 iso_pu_bacteria 2603880178 2606050530 386
115 iso_pu_bacteria 2603880184 2606070664 386
116 iso_pu_bacteria 2603880202 2606148214 386
117 iso_pu_bacteria 2603880211 2606178577 386
118 iso_pu_bacteria 2648501693 2650898691 386
119 iso_pu_bacteria 2654587920 2656275889 386
120 iso_pu_bacteria 2675903046 2676406957 386
121 iso_pu_bacteria 2681812866 2681996042 386
122 iso_pu_bacteria 2687453601 2689443603 386
123 iso_pu_bacteria 2751185917 2753854781 386
124 iso_pu_bacteria 2765235842 2765587646 386
125 iso_pu_bacteria 2772190666 2772436634 386
126 iso_pu_bacteria 2775507074 2777023689 386
127 iso_pu_bacteria 2811995292 2813730382 386
128 iso_pu_bacteria 2814123068 2814697637 386
129 iso_pu_bacteria 2821118458 2821118501 386
130 iso_pu_bacteria 2852103415 2852103584 386
131 iso_pu_bacteria 2858466076 2858469269 386
132 iso_pu_bacteria 2869551831 2869552969 386
133 iso_pu_bacteria 2871282230 2871283030 386
134 iso_pu_bacteria 2871282230 2871284491 386
135 iso_pu_bacteria 2871282230 2871285898 386
136 iso_pu_bacteria 2900051742 2900053100 386
137 iso_pu_bacteria 2908669403 2908671191 386
138 iso_pu_bacteria 2927833300 2927835166 386
139 iso_pu_bacteria 2932406140 2932409969 386
140 iso_pu_bacteria 2932406140 2932410035 386
141 iso_pu_bacteria 2935625433 2935629779 386
142 iso_pu_bacteria 2939577877 2939581028 386
143 iso_pu_bacteria 2939577877 2939581375 386
144 iso_pu_bacteria 2945874760 2945879261 386
145 iso_pu_bacteria 2945874760 2945879524 386
146 iso_pu_bacteria 2984494565 2984495663 386
147 iso_pu_bacteria 2984494565 2984496357 386
148 iso_pu_bacteria 2990261002 2990261778 386
149 iso_pu_bacteria 2990261002 2990264358 386
150 iso_pu_bacteria 640753048 640939447 386
151 iso_pu_bacteria 8004592986 8004594448 386
152 iso_pu_bacteria 8015394850 8015399787 386
153 iso_pu_bacteria 8054849141 8054851176 386
154 3300002737 JGI25162J39368_1000002 JGI25162J39368_100000276 387
155 3300002772 JGI25164J39214_1000066 JGI25164J39214_100006640 387
156 3300003751 Ga0055538_1000003 Ga0055538_100000376 387
157 3300003752 Ga0055539_1000003 Ga0055539_1000003540 387
158 3300003756 Ga0055533_1000005 Ga0055533_1000005540 387
159 3300003759 Ga0055525_1000005 Ga0055525_100000576 387
160 3300003841 Ga0055541_1000003 Ga0055541_100000376 387
161 3300025207 Ga0209760_100005 Ga0209760_10000575 387
162 3300025224 Ga0209784_100001 Ga0209784_1000013297 387
163 3300025225 Ga0209566_100001 Ga0209566_1000013297 387
164 3300025226 Ga0209674_100002 Ga0209674_1000023297 387
165 3300025230 Ga0209563_100002 Ga0209563_1000021832 387
166 3300025231 Ga0207427_100009 Ga0207427_10000975 387
167 3300025233 Ga0209437_100001 Ga0209437_1000011832 387
168 3300025253 Ga0209677_100002 Ga0209677_1000021832 387
169 3300025261 Ga0209233_1001826 Ga0209233_10018265 387
170 3300027312 Ga0209371_1000599 Ga0209371_10005993 387
171 3300030500 Ga0268256_1000518 Ga0268256_10005183 387
172 3300046542 Ga0495597_0001536 Ga0495597_0001536_11744_12910 387
173 3300048904 Ga0496101_0000063 Ga0496101_0000063_22780_23946 387
174 3300048919 Ga0496116_0000411 Ga0496116_0000411_42168_43337 387
175 3300048920 Ga0496117_0005619 Ga0496117_0005619_292_1461 387
176 3300048920 Ga0496117_0016835 Ga0496117_0016835_426_1613 387
177 3300048921 Ga0496118_0001323 Ga0496118_0001323_28824_30011 387
178 3300048921 Ga0496118_0006312 Ga0496118_0006312_291_1460 387
179 3300048922 Ga0496119_0006127 Ga0496119_0006127_289_1464 387
180 3300048922 Ga0496119_0017031 Ga0496119_0017031_4058_5224 387
181 3300048924 Ga0496121_0022994 Ga0496121_0022994_406_1581 387
182 3300048925 Ga0496122_0006580 Ga0496122_0006580_1696_2862 387
183 3300048926 Ga0496123_0005955 Ga0496123_0005955_10401_11567 387
184 3300048927 Ga0496124_0003565 Ga0496124_0003565_808_1974 387
185 3300048927 Ga0496124_0006335 Ga0496124_0006335_289_1455 387
186 3300048927 Ga0496124_0011397 Ga0496124_0011397_7432_8598 387
187 3300048929 Ga0496126_0005781 Ga0496126_0005781_263_1432 387
188 3300048929 Ga0496126_0007202 Ga0496126_0007202_284_1489 387
189 3300009011 Ga0105251_10003457 Ga0105251_1000345713 388
190 3300009011 Ga0105251_10012283 Ga0105251_100122831 388
191 3300009036 Ga0105244_10057595 Ga0105244_100575952 388
192 3300013100 Ga0157373_10000257 Ga0157373_1000025735 388
193 3300013102 Ga0157371_10001022 Ga0157371_1000102213 388
194 3300013105 Ga0157369_10001247 Ga0157369_1000124729 388
195 3300025728 Ga0207655_1000050 Ga0207655_1000050261 388
196 3300025735 Ga0207713_1002410 Ga0207713_100241013 388
197 3300025735 Ga0207713_1013410 Ga0207713_10134104 388
198 3300030500 Ga0268256_1019400 Ga0268256_10194001 388
199 3300041411 Ga0439466_0003273 Ga0439466_0003273_3638_4834 388
200 3300042006 Ga0439432_017304 Ga0439432_017304_913_2136 388
201 3300046474 Ga0495605_0002654 Ga0495605_0002654_1595_2767 388
202 3300047469 Ga0495673_0000256 Ga0495673_0000256_33118_34290 388
203 3300048920 Ga0496117_0001176 Ga0496117_0001176_10550_11719 388
204 3300048920 Ga0496117_0001802 Ga0496117_0001802_26358_27530 388
205 3300048920 Ga0496117_0002360 Ga0496117_0002360_15288_16460 388
206 3300048921 Ga0496118_0002806 Ga0496118_0002806_21358_22527 388
207 3300048921 Ga0496118_0004067 Ga0496118_0004067_1216_2388 388
208 3300048921 Ga0496118_0006322 Ga0496118_0006322_10681_11853 388
209 3300048923 Ga0496120_0001554 Ga0496120_0001554_288_1511 388
210 3300048924 Ga0496121_0013050 Ga0496121_0013050_6505_7701 388
211 3300048925 Ga0496122_0000145 Ga0496122_0000145_131597_132769 388
212 3300048926 Ga0496123_0000824 Ga0496123_0000824_15368_16540 388
213 3300048927 Ga0496124_0015090 Ga0496124_0015090_5916_7139 388
214 3300003856 Ga0058692_1000373 Ga0058692_10003732 389
215 3300006946 Ga0079104_1002766 Ga0079104_10027662 389
216 3300009011 Ga0105251_10004866 Ga0105251_100048665 389
217 3300009092 Ga0105250_10000159 Ga0105250_1000015922 389
218 3300009092 Ga0105250_10000343 Ga0105250_1000034341 389
219 3300009092 Ga0105250_10007367 Ga0105250_100073672 389
220 3300009092 Ga0105250_10008463 Ga0105250_100084632 389
221 3300013100 Ga0157373_10020863 Ga0157373_100208632 389
222 3300025711 Ga0207696_1000067 Ga0207696_1000067173 389
223 3300025711 Ga0207696_1002024 Ga0207696_10020242 389
224 3300027111 Ga0209281_1003113 Ga0209281_10031135 389
225 3300027312 Ga0209371_1000833 Ga0209371_10008332 389
226 3300030500 Ga0268256_1000621 Ga0268256_100062127 389
227 3300041405 Ga0439438_004684 Ga0439438_004684_256_1479 389
228 3300042010 Ga0439452_000017 Ga0439452_000017_239510_240715 389
229 3300044669 Ga0466981_0000015 Ga0466981_0000015_61650_62852 389
230 3300046458 Ga0495591_000126 Ga0495591_000126_12357_13529 389
231 3300048920 Ga0496117_0013913 Ga0496117_0013913_5521_6708 389
232 3300048921 Ga0496118_0011522 Ga0496118_0011522_925_2112 389
233 3300048922 Ga0496119_0000043 Ga0496119_0000043_74311_75516 389
234 3300048922 Ga0496119_0001050 Ga0496119_0001050_33862_35058 389
235 3300048922 Ga0496119_0005593 Ga0496119_0005593_3732_4919 389
236 3300048923 Ga0496120_0000009 Ga0496120_0000009_216689_217894 389
237 3300048923 Ga0496120_0001096 Ga0496120_0001096_33872_35068 389
238 3300048923 Ga0496120_0003549 Ga0496120_0003549_5877_7064 389
239 3300048924 Ga0496121_0004257 Ga0496121_0004257_16439_17626 389
240 3300048925 Ga0496122_0025526 Ga0496122_0025526_3821_5008 389
241 3300048925 Ga0496122_0030741 Ga0496122_0030741_56_1228 389
242 3300048926 Ga0496123_0000171 Ga0496123_0000171_21719_22900 389
243 3300048928 Ga0496125_0001164 Ga0496125_0001164_21886_23073 389
244 3300048928 Ga0496125_0014863 Ga0496125_0014863_275_1462 389
245 3300048929 Ga0496126_0002549 Ga0496126_0002549_22888_24099 389
246 2162886007 SwRhRL2b_contig_1836092 SwRhRL2b_0458.00007570 390
247 3300003856 Ga0058692_1000043 Ga0058692_1000043100 390
248 3300003856 Ga0058692_1000500 Ga0058692_100050020 390
249 3300005289 Ga0065704_10000744 Ga0065704_100007442 390
250 3300005577 Ga0068857_100000071 Ga0068857_10000007142 390
251 3300006051 Ga0075364_10063342 Ga0075364_100633423 390
252 3300006946 Ga0079104_1000619 Ga0079104_100061921 390
253 3300006946 Ga0079104_1000880 Ga0079104_100088029 390
254 3300006946 Ga0079104_1004988 Ga0079104_10049881 390
255 3300006946 Ga0079104_1015866 Ga0079104_10158662 390
256 3300009011 Ga0105251_10003038 Ga0105251_1000303815 390
257 3300009011 Ga0105251_10036286 Ga0105251_100362863 390
258 3300009036 Ga0105244_10001052 Ga0105244_1000105223 390
259 3300009036 Ga0105244_10001096 Ga0105244_1000109624 390
260 3300009036 Ga0105244_10003787 Ga0105244_100037879 390
261 3300009092 Ga0105250_10000021 Ga0105250_10000021151 390
262 3300009092 Ga0105250_10001176 Ga0105250_1000117618 390
263 3300009092 Ga0105250_10001620 Ga0105250_1000162017 390
264 3300009092 Ga0105250_10002201 Ga0105250_1000220111 390
265 3300009101 Ga0105247_10000720 Ga0105247_100007202 390
266 3300013100 Ga0157373_10001030 Ga0157373_100010302 390
267 3300013100 Ga0157373_10023371 Ga0157373_100233715 390
268 3300013102 Ga0157371_10014999 Ga0157371_100149994 390
269 3300013306 Ga0163162_10040331 Ga0163162_100403314 390
270 3300021384 Ga0213876_10000025 Ga0213876_1000002521 390
271 3300025245 Ga0207425_1006808 Ga0207425_10068084 390
272 3300025258 Ga0209129_1000021 Ga0209129_1000021122 390
273 3300025711 Ga0207696_1000061 Ga0207696_1000061150 390
274 3300025711 Ga0207696_1000944 Ga0207696_10009442 390
275 3300025711 Ga0207696_1001206 Ga0207696_10012062 390
276 3300025711 Ga0207696_1001357 Ga0207696_100135712 390
277 3300025711 Ga0207696_1001584 Ga0207696_10015842 390
278 3300025728 Ga0207655_1001263 Ga0207655_100126322 390
279 3300025728 Ga0207655_1001404 Ga0207655_10014041 390
280 3300025728 Ga0207655_1001581 Ga0207655_100158119 390
281 3300025735 Ga0207713_1000023 Ga0207713_100002334 390
282 3300025900 Ga0207710_10000024 Ga0207710_10000024115 390
283 3300026116 Ga0207674_10000067 Ga0207674_1000006767 390
284 3300027111 Ga0209281_1000465 Ga0209281_100046554 390
285 3300027111 Ga0209281_1000811 Ga0209281_10008112 390
286 3300027111 Ga0209281_1002250 Ga0209281_10022506 390
287 3300027312 Ga0209371_1000050 Ga0209371_10000503 390
288 3300027312 Ga0209371_1000334 Ga0209371_10003342 390
289 3300027312 Ga0209371_1017652 Ga0209371_10176521 390
290 3300030500 Ga0268256_1000017 Ga0268256_1000017416 390
291 3300030500 Ga0268256_1000323 Ga0268256_100032345 390
292 3300030500 Ga0268256_1019663 Ga0268256_10196633 390
293 3300039437 Ga0436365_1279401 Ga0436365_1279401_78026_79240 390
294 3300042010 Ga0439452_000171 Ga0439452_000171_8157_9371 390
295 3300044669 Ga0466981_0000006 Ga0466981_0000006_60484_61680 390
296 3300046458 Ga0495591_000257 Ga0495591_000257_24357_25571 390
297 3300046530 Ga0495654_0000040 Ga0495654_0000040_12466_13782 390
298 3300046530 Ga0495654_0003796 Ga0495654_0003796_1492_2673 390
299 3300046794 Ga0495589_0000002 Ga0495589_0000002_716128_717342 390
300 3300047446 Ga0495679_000005 Ga0495679_000005_915_2108 390
301 3300047469 Ga0495673_0000137 Ga0495673_0000137_4436_5617 390
302 3300048907 Ga0496104_0027799 Ga0496104_0027799_288_1460 390
303 3300048919 Ga0496116_0000320 Ga0496116_0000320_8026_9240 390
304 3300048919 Ga0496116_0000505 Ga0496116_0000505_434_1648 390
305 3300048919 Ga0496116_0010957 Ga0496116_0010957_6047_7291 390
306 3300048919 Ga0496116_0023954 Ga0496116_0023954_1774_2988 390
307 3300048920 Ga0496117_0001450 Ga0496117_0001450_5698_6912 390
308 3300048920 Ga0496117_0001617 Ga0496117_0001617_8025_9239 390
309 3300048920 Ga0496117_0017737 Ga0496117_0017737_2614_3828 390
310 3300048920 Ga0496117_0028843 Ga0496117_0028843_2038_3252 390
311 3300048920 Ga0496117_0103857 Ga0496117_0103857_290_1531 390
312 3300048920 Ga0496117_0124948 Ga0496117_0124948_63_1247 390
313 3300048921 Ga0496118_0003820 Ga0496118_0003820_647_1861 390
314 3300048921 Ga0496118_0006074 Ga0496118_0006074_1223_2437 390
315 3300048921 Ga0496118_0008504 Ga0496118_0008504_2518_3732 390
316 3300048921 Ga0496118_0009883 Ga0496118_0009883_302_1516 390
317 3300048922 Ga0496119_0001955 Ga0496119_0001955_1405_2634 390
318 3300048922 Ga0496119_0003261 Ga0496119_0003261_381_1595 390
319 3300048922 Ga0496119_0004983 Ga0496119_0004983_10860_12074 390
320 3300048922 Ga0496119_0005565 Ga0496119_0005565_9510_10706 390
321 3300048922 Ga0496119_0022516 Ga0496119_0022516_3054_4268 390
322 3300048922 Ga0496119_0070990 Ga0496119_0070990_547_1719 390
323 3300048923 Ga0496120_0000460 Ga0496120_0000460_56564_57778 390
324 3300048923 Ga0496120_0003172 Ga0496120_0003172_274_1488 390
325 3300048923 Ga0496120_0004318 Ga0496120_0004318_9510_10706 390
326 3300048923 Ga0496120_0004414 Ga0496120_0004414_275_1504 390
327 3300048923 Ga0496120_0062886 Ga0496120_0062886_338_1510 390
328 3300048924 Ga0496121_0002887 Ga0496121_0002887_19047_20261 390
329 3300048924 Ga0496121_0007989 Ga0496121_0007989_11165_12346 390
330 3300048924 Ga0496121_0035378 Ga0496121_0035378_401_1615 390
331 3300048925 Ga0496122_0001845 Ga0496122_0001845_30792_32006 390
332 3300048925 Ga0496122_0003204 Ga0496122_0003204_6741_7925 390
333 3300048926 Ga0496123_0010442 Ga0496123_0010442_283_1467 390
334 3300048926 Ga0496123_0015480 Ga0496123_0015480_2448_3662 390
335 3300048927 Ga0496124_0004047 Ga0496124_0004047_15879_17093 390
336 3300048927 Ga0496124_0007339 Ga0496124_0007339_10255_11457 390
337 3300048927 Ga0496124_0008160 Ga0496124_0008160_7381_8595 390
338 3300048927 Ga0496124_0014250 Ga0496124_0014250_875_2089 390
339 3300048927 Ga0496124_0022569 Ga0496124_0022569_971_2152 390
340 3300048928 Ga0496125_0007360 Ga0496125_0007360_292_1464 390
341 3300048928 Ga0496125_0008204 Ga0496125_0008204_267_1496 390
342 3300048928 Ga0496125_0016505 Ga0496125_0016505_288_1466 390
343 3300048929 Ga0496126_0002598 Ga0496126_0002598_22358_23587 390
344 3300048929 Ga0496126_0003906 Ga0496126_0003906_13482_14696 390
345 3300048929 Ga0496126_0004428 Ga0496126_0004428_301_1515 390
346 3300048929 Ga0496126_0064158 Ga0496126_0064158_685_1899 390
347 3300050491 nmdc:mga00v17_90114_c1 nmdc:mga00v17_90114_c1_682_1896 390

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22022

Phage_int_M

Phage integrase central domain

100

195

0.98

PF00589

Phage_integrase

Phage integrase family

205

371

0.96

PF13356

Arm-DNA-bind_3

Arm DNA-binding domain

3

88

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3jtz-assembly1.cif.gz_A structure of the arm-type binding domain of hpi integrase 0.961 3 76
3rmp-assembly1.cif.gz_C structural basis for the recognition of attp substrates by p4-like integrases 0.958 3 76
3ju0-assembly1.cif.gz_A structure of the arm-type binding domain of hai7 integrase 0.9576 3 83
3jtz-assembly1.cif.gz_A structure of the arm-type binding domain of hpi integrase 0.9134 3 76
3rmp-assembly1.cif.gz_C structural basis for the recognition of attp substrates by p4-like integrases 0.9094 3 76
ID Description Score Start End Superfamily
af_P39347_1_63_3.30.160.390 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain 0.985 28 87 3.30.160.390
af_P37326_1_84_3.30.160.390 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain 0.9733 3 84 3.30.160.390
af_P32053_7_95_3.30.160.390 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain 0.9632 2 87 3.30.160.390
3rmpC00 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain 0.958 3 76 3.30.160.390
3ju0A00 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain 0.9576 3 83 3.30.160.390
ID Description Score Start End GO Terms
AF-A0A059Y1C7-F1-model_v4 Integrase DNA-binding domain-containing protein 0.9823 1 93 GO:0015074
AF-A0A6M0D283-F1-model_v4 DUF4102 domain-containing protein 0.9802 1 81 GO:0015074
AF-A0A4Q5QP63-F1-model_v4 DUF4102 domain-containing protein 0.9771 3 97 GO:0015074
AF-A0A239J020-F1-model_v4 Integrase DNA-binding domain-containing protein 0.977 1 83 GO:0015074
AF-Q72AY5-F1-model_v4 Integrase, truncation 0.9765 1 82 GO:0015074

Feature Viewer

pLDDT pTM Quality
87.01 0.51 Medium
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Predicted Structure (AlphaFold2)

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