F416943

General Info

Members Datasets Scaffolds Average Seq Length
346 182 692 385

Family's Representative Sequence

Representative Sequence 3300050515|nmdc:mga0a205_183592_c1|nmdc:mga0a205_183592_c1_355_1623
Length 422
Sequence VSIALQDFMANGGRRAVEERRSLTPSAPADYHQPFAVMKIHEYQAKSILARFGVPVPRGEVAFNSDEAFQIAHRLGGTVVVKAQIHAGGRGKGGGVKLAKSAQDAETIARQMLGMTLVTHQTGPAGRVVARVLIEEGLQMTRELYLSVVLDRAAAKPVMMASAAGGMDIEEVAAKTPEKIVKVHIEPGVGLVPFEARNLAFGIGLGGPEVNKFVKLAAAVYDAFVATDASLIEINPLVVTQSGDLLALDAKMNFDDNALSRHADIREFRDLGEEDPLEIEASKYSLNYIRLDGNIGCMVNGAGLAMATMDIIKLAGGEPANFLDVGGGANAEQIRNAFKILMSDHNVKAVLINIFGGILRCDVLAQGVIAAVKDLGVPVPIVIRMEGTNVDEGKRLLRESGMNFTTADGMDEAATKVVQAAR

Samples

Sample ID Description Type Environment
1 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
111 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
112 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
113 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
114 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
115 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
116 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
117 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
118 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
119 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
120 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
121 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
122 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
125 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
126 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
127 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
128 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
131 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
132 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
133 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
134 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
139 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
160 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
161 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
162 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
163 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
166 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
179 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
180 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0
Rhizoplane 5.2
Rhizosphere 93.93
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0a205_183592_c1 3300050515 Bacteria 1985
2 Ga0065715_10006892 3300005293 Bacteria 3744
3 Ga0070658_10048456 3300005327 Bacteria 3441
4 Ga0070676_10071099 3300005328 Bacteria 2089
5 Ga0070683_100113219 3300005329 Bacteria 2561
6 Ga0070683_100233996 3300005329 Bacteria 1747
7 Ga0070670_100046424 3300005331 Bacteria 3735
8 Ga0070666_10018509 3300005335 Bacteria 4480
9 Ga0070666_10215364 3300005335 Bacteria 1353
10 Ga0068868_100017048 3300005338 Bacteria 5405
11 Ga0068868_100080538 3300005338 Bacteria 2610
12 Ga0068868_100121423 3300005338 Bacteria 2132
13 Ga0070660_100038655 3300005339 Bacteria 3624
14 Ga0070689_100060048 3300005340 Bacteria 2955
15 Ga0070689_100105436 3300005340 Bacteria 2236
16 Ga0070692_10036360 3300005345 Bacteria 2499
17 Ga0070668_100153636 3300005347 Bacteria 1863
18 Ga0070669_100000232 3300005353 Bacteria 46663
19 Ga0070675_100000055 3300005354 Bacteria 68147
20 Ga0070675_100081200 3300005354 Bacteria 2703
21 Ga0070674_100008789 3300005356 Bacteria 6027
22 Ga0070688_100142718 3300005365 Bacteria 1629
23 Ga0070714_100000543 3300005435 Bacteria 27190
24 Ga0070713_100172788 3300005436 Bacteria 1937
25 Ga0070700_100005782 3300005441 Bacteria 6563
26 Ga0070694_100047281 3300005444 Bacteria 2891
27 Ga0070708_100081708 3300005445 Bacteria 2926
28 Ga0070708_100234424 3300005445 Bacteria 1723
29 Ga0070678_100043725 3300005456 Bacteria 3193
30 Ga0070681_10004061 3300005458 Bacteria 13821
31 Ga0070681_10153457 3300005458 Bacteria 2228
32 Ga0068867_100038843 3300005459 Bacteria 3467
33 Ga0070707_100051715 3300005468 Bacteria 3938
34 Ga0070698_100028768 3300005471 Bacteria 5769
35 Ga0070698_100203908 3300005471 Bacteria 1913
36 Ga0070699_100006906 3300005518 Bacteria 9869
37 Ga0070699_100127713 3300005518 Bacteria 2240
38 Ga0070684_100127813 3300005535 Bacteria 2290
39 Ga0070697_100023868 3300005536 Bacteria 4866
40 Ga0070672_100016899 3300005543 Bacteria 5236
41 Ga0070686_100000926 3300005544 Bacteria 16872
42 Ga0070695_100002313 3300005545 Bacteria 10922
43 Ga0070695_100011098 3300005545 Bacteria 5384
44 Ga0070695_100146217 3300005545 Bacteria 1645
45 Ga0070665_100013217 3300005548 Bacteria 8316
46 Ga0070665_100016697 3300005548 Bacteria 7357
47 Ga0070665_100144341 3300005548 Bacteria 2384
48 Ga0070704_100016935 3300005549 Bacteria 4621
49 Ga0070704_100093716 3300005549 Bacteria 2245
50 Ga0068855_100034804 3300005563 Bacteria 6003
51 Ga0068857_100071284 3300005577 Bacteria 3096
52 Ga0068857_100093278 3300005577 Bacteria 2696
53 Ga0068854_100099930 3300005578 Bacteria 2174
54 Ga0068859_100075216 3300005617 Bacteria 3418
55 Ga0068859_100242457 3300005617 Bacteria 1892
56 Ga0068861_100019680 3300005719 Bacteria 4822
57 Ga0068863_100033416 3300005841 Bacteria 4900
58 Ga0068863_100068129 3300005841 Bacteria 3367
59 Ga0068863_100190483 3300005841 Bacteria 1971
60 Ga0068858_100006437 3300005842 Bacteria 11436
61 Ga0068858_100122758 3300005842 Bacteria 2430
62 Ga0068860_100049393 3300005843 Bacteria 4007
63 Ga0068862_100005212 3300005844 Bacteria 10923
64 Ga0068862_100089125 3300005844 Bacteria 2685
65 Ga0068862_100095517 3300005844 Bacteria 2593
66 Ga0068862_100293116 3300005844 Bacteria 1495
67 Ga0070717_10244086 3300006028 Bacteria 1585
68 Ga0075367_10029675 3300006178 Bacteria 3130
69 Ga0075366_10062112 3300006195 Bacteria 2221
70 Ga0097621_100013120 3300006237 Bacteria 6163
71 Ga0097621_100030615 3300006237 Bacteria 4262
72 Ga0097621_100146746 3300006237 Bacteria 2020
73 Ga0068871_100013238 3300006358 Bacteria 6117
74 Ga0068871_100058017 3300006358 Bacteria 3151
75 Ga0068871_100073285 3300006358 Bacteria 2823
76 Ga0075428_100000108 3300006844 Bacteria 70319
77 Ga0075428_100018860 3300006844 Bacteria 7628
78 Ga0075431_100094148 3300006847 Bacteria 3092
79 Ga0075433_10066553 3300006852 Bacteria 3162
80 Ga0075433_10205108 3300006852 Bacteria 1752
81 Ga0075434_100007565 3300006871 Bacteria 10065
82 Ga0075434_100025052 3300006871 Bacteria 5836
83 Ga0075434_100081357 3300006871 Bacteria 3236
84 Ga0075434_100158709 3300006871 Bacteria 2281
85 Ga0075436_100003532 3300006914 Bacteria 10721
86 Ga0075436_100014961 3300006914 Bacteria 5318
87 Ga0075436_100027530 3300006914 Bacteria 3911
88 Ga0075436_100098477 3300006914 Bacteria 2035
89 Ga0075436_100133058 3300006914 Bacteria 1745
90 Ga0097620_100075222 3300006931 Bacteria 3418
91 Ga0097620_100242479 3300006931 Bacteria 1892
92 Ga0097620_100352539 3300006931 Bacteria 1566
93 Ga0075435_100000982 3300007076 Bacteria 18062
94 Ga0075435_100007318 3300007076 Bacteria 7859
95 Ga0075435_100007416 3300007076 Bacteria 7810
96 Ga0075435_100014716 3300007076 Bacteria 5862
97 Ga0075435_100288407 3300007076 Bacteria 1402
98 Ga0105240_10066249 3300009093 Bacteria 4481
99 Ga0105240_10081193 3300009093 Bacteria 3985
100 Ga0105240_10110897 3300009093 Bacteria 3320
101 Ga0111539_10000001 3300009094 Bacteria 1035431
102 Ga0111539_10001440 3300009094 Bacteria 31737
103 Ga0111539_10004897 3300009094 Bacteria 17434
104 Ga0111539_10012966 3300009094 Bacteria 10430
105 Ga0111539_10014309 3300009094 Bacteria 9906
106 Ga0105247_10006370 3300009101 Bacteria 7311
107 Ga0105247_10026679 3300009101 Bacteria 3490
108 Ga0114129_10005172 3300009147 Bacteria 18362
109 Ga0114129_10005698 3300009147 Bacteria 17647
110 Ga0114129_10018144 3300009147 Bacteria 10021
111 Ga0114129_10025369 3300009147 Bacteria 8400
112 Ga0114129_10033052 3300009147 Bacteria 7310
113 Ga0114129_10053937 3300009147 Bacteria 5638
114 Ga0114129_10068939 3300009147 Bacteria 4930
115 Ga0114129_10087702 3300009147 Bacteria 4314
116 Ga0114129_10105962 3300009147 Bacteria 3884
117 Ga0114129_10115560 3300009147 Bacteria 3698
118 Ga0114129_10245710 3300009147 Bacteria 2404
119 Ga0114129_10388522 3300009147 Bacteria 1841
120 Ga0105241_10023415 3300009174 Bacteria 4579
121 Ga0105242_10008060 3300009176 Bacteria 8113
122 Ga0105242_10011698 3300009176 Bacteria 6751
123 Ga0105248_10048889 3300009177 Bacteria 4744
124 Ga0105248_10106006 3300009177 Bacteria 3169
125 Ga0105248_10151019 3300009177 Bacteria 2621
126 Ga0105248_10162266 3300009177 Bacteria 2520
127 Ga0105237_10271424 3300009545 Bacteria 1699
128 Ga0105246_10065092 3300011119 Bacteria 2549
129 Ga0157374_10041886 3300013296 Bacteria 4222
130 Ga0157378_10060594 3300013297 Bacteria 3376
131 Ga0157375_10409107 3300013308 Bacteria 1523
132 Ga0163163_10000017 3300014325 Bacteria 208781
133 Ga0163163_10003074 3300014325 Bacteria 14130
134 Ga0163163_10029340 3300014325 Bacteria 5290
135 Ga0157380_10000592 3300014326 Bacteria 22301
136 Ga0157379_10081428 3300014968 Bacteria 2900
137 Ga0157379_10099438 3300014968 Bacteria 2612
138 Ga0157379_10338440 3300014968 Bacteria 1376
139 Ga0157376_10027353 3300014969 Bacteria 4519
140 Ga0207710_10005045 3300025900 Bacteria 5720
141 Ga0207688_10062287 3300025901 Bacteria 2103
142 Ga0207680_10100945 3300025903 Bacteria 1854
143 Ga0207645_10006324 3300025907 Bacteria 8515
144 Ga0207643_10094374 3300025908 Bacteria 1748
145 Ga0207705_10139083 3300025909 Bacteria 1812
146 Ga0207707_10009702 3300025912 Bacteria 8352
147 Ga0207662_10017446 3300025918 Bacteria 4061
148 Ga0207646_10051360 3300025922 Bacteria 3690
149 Ga0207681_10012804 3300025923 Bacteria 5184
150 Ga0207681_10020774 3300025923 Bacteria 4166
151 Ga0207681_10030722 3300025923 Bacteria 3504
152 Ga0207681_10046011 3300025923 Bacteria 2933
153 Ga0207694_10199885 3300025924 Bacteria 1626
154 Ga0207650_10029091 3300025925 Bacteria 3968
155 Ga0207659_10027313 3300025926 Bacteria 3863
156 Ga0207659_10254170 3300025926 Bacteria 1427
157 Ga0207687_10079999 3300025927 Bacteria 2358
158 Ga0207664_10001732 3300025929 Bacteria 14363
159 Ga0207664_10170101 3300025929 Bacteria 1864
160 Ga0207644_10041889 3300025931 Bacteria 3242
161 Ga0207686_10014850 3300025934 Bacteria 4347
162 Ga0207686_10026928 3300025934 Bacteria 3360
163 Ga0207670_10031831 3300025936 Bacteria 3386
164 Ga0207704_10012341 3300025938 Bacteria 4242
165 Ga0207704_10055930 3300025938 Bacteria 2414
166 Ga0207691_10073103 3300025940 Bacteria 3092
167 Ga0207691_10091882 3300025940 Bacteria 2718
168 Ga0207711_10048666 3300025941 Bacteria 3627
169 Ga0207711_10060466 3300025941 Bacteria 3265
170 Ga0207711_10075974 3300025941 Bacteria 2924
171 Ga0207711_10118092 3300025941 Bacteria 2366
172 Ga0207711_10134141 3300025941 Bacteria 2222
173 Ga0207711_10217786 3300025941 Bacteria 1745
174 Ga0207661_10172779 3300025944 Bacteria 1882
175 Ga0207667_10224905 3300025949 Bacteria 1922
176 Ga0207712_10027819 3300025961 Bacteria 3778
177 Ga0207703_10031097 3300026035 Bacteria 4219
178 Ga0207639_10177179 3300026041 Bacteria 1811
179 Ga0207641_10022186 3300026088 Bacteria 5225
180 Ga0207648_10031357 3300026089 Bacteria 4699
181 Ga0207648_10245178 3300026089 Bacteria 1596
182 Ga0207676_10012077 3300026095 Bacteria 6181
183 Ga0207674_10075620 3300026116 Bacteria 3377
184 Ga0207675_100018670 3300026118 Bacteria 6472
185 Ga0207683_10035017 3300026121 Bacteria 4367
186 Ga0207683_10243233 3300026121 Bacteria 1641
187 Ga0207428_10000002 3300027907 Bacteria 854851
188 Ga0207428_10002456 3300027907 Bacteria 18510
189 Ga0207428_10014637 3300027907 Bacteria 6800
190 Ga0207428_10015437 3300027907 Bacteria 6607
191 Ga0207428_10036430 3300027907 Bacteria 4012
192 Ga0268266_10034080 3300028379 Bacteria 4328
193 Ga0268266_10155095 3300028379 Bacteria 2067
194 Ga0268265_10008952 3300028380 Bacteria 6770
195 Ga0268265_10014307 3300028380 Bacteria 5404
196 Ga0268265_10087890 3300028380 Bacteria 2474
197 Ga0268264_10040716 3300028381 Bacteria 3839
198 Ga0307413_10071923 3300031824 Bacteria 2181
199 Ga0307414_10036381 3300032004 Bacteria 3287
200 Ga0373948_0000616 3300034817 Bacteria 4587
201 Ga0373934_0011937 3300035086 Bacteria 3275
202 Ga0373949_0001817 3300035090 Bacteria 5830
203 Ga0373932_0003111 3300035112 Bacteria 4041
204 Ga0373941_0000162 3300035115 Bacteria 12194
205 Ga0373941_0009285 3300035115 Bacteria 2472
206 Ga0373960_0000007 3300035121 Bacteria 26901
207 Ga0373955_0008316 3300035172 Bacteria 4815
208 Ga0373942_0001338 3300035207 Bacteria 6387
209 Ga0373962_0000568 3300035242 Bacteria 8343
210 Ga0373931_0001425 3300035691 Bacteria 10252
211 Ga0373927_0058610 3300035695 Bacteria 2491
212 Ga0373933_0021689 3300035724 Bacteria 3651
213 Ga0373933_0219643 3300035724 Bacteria 1219
214 Ga0373947_0131645 3300035725 Bacteria 1597
215 Ga0373937_0000499 3300036401 Bacteria 35871
216 Ga0373937_0094068 3300036401 Bacteria 2779
217 Ga0439450_020849 3300042008 Bacteria 1402
218 Ga0439462_0010947 3300042015 Bacteria 2304
219 Ga0450923_002682 3300042125 Bacteria 2586
220 Ga0450898_011881 3300042134 Bacteria 1431
221 Ga0439460_0011942 3300042461 Bacteria 2246
222 Ga0451576_0005743 3300045051 Bacteria 15449
223 Ga0495651_0087914 3300046462 Bacteria 2336
224 Ga0495621_0075816 3300046539 Bacteria 1247
225 Ga0495645_0035066 3300046543 Bacteria 3658
226 Ga0495633_0109650 3300046558 Bacteria 1280
227 Ga0495647_0027198 3300046681 Bacteria 2101
228 Ga0495658_0074860 3300046683 Bacteria 1974
229 Ga0495669_0052702 3300046684 Bacteria 1829
230 Ga0495684_0151201 3300047471 Bacteria 1735
231 Ga0496100_0006282 3300048903 Bacteria 6471
232 Ga0496101_0000222 3300048904 Bacteria 42490
233 Ga0496104_0001478 3300048907 Bacteria 20272
234 Ga0496104_0012796 3300048907 Bacteria 7558
235 Ga0496105_0233086 3300048908 Bacteria 1496
236 Ga0496107_0011835 3300048910 Bacteria 6093
237 Ga0496108_0021526 3300048911 Bacteria 5298
238 Ga0496109_0061950 3300048912 Bacteria 3421
239 Ga0496109_0071675 3300048912 Bacteria 3182
240 Ga0496112_0014577 3300048915 Bacteria 7302
241 Ga0496112_0049760 3300048915 Bacteria 4108
242 Ga0496112_0153523 3300048915 Bacteria 2270
243 Ga0496113_0022978 3300048916 Bacteria 4419
244 Ga0496113_0107813 3300048916 Bacteria 2165
245 Ga0496113_0282803 3300048916 Bacteria 1327
246 Ga0496114_0000416 3300048917 Bacteria 31603
247 Ga0496114_0042936 3300048917 Bacteria 3749
248 Ga0496114_0388204 3300048917 Bacteria 1236
249 Ga0501033_0036077 3300049570 Bacteria 3706
250 Ga0501034_0257952 3300049571 Bacteria 1687
251 Ga0501036_0034590 3300049572 Bacteria 4275
252 Ga0501036_0061366 3300049572 Bacteria 3184
253 Ga0501039_0048195 3300049575 Bacteria 3293
254 Ga0501039_0131537 3300049575 Bacteria 1964
255 Ga0501039_0138110 3300049575 Bacteria 1914
256 Ga0501041_0003458 3300049577 Bacteria 9089
257 Ga0501042_0014921 3300049578 Bacteria 5311
258 Ga0501042_0021928 3300049578 Bacteria 4458
259 Ga0501043_0025863 3300049579 Bacteria 4604
260 Ga0501043_0141766 3300049579 Bacteria 1882
261 Ga0501043_0165349 3300049579 Bacteria 1728
262 Ga0501047_0052507 3300049581 Bacteria 3940
263 Ga0501048_0023241 3300049582 Bacteria 4534
264 Ga0501068_0055716 3300049584 Bacteria 2395
265 Ga0501072_0026624 3300049588 Bacteria 4509
266 Ga0501072_0027940 3300049588 Bacteria 4403
267 Ga0501072_0043905 3300049588 Bacteria 3515
268 Ga0501073_0000842 3300049589 Bacteria 21848
269 Ga0501074_0140435 3300049590 Bacteria 1728
270 Ga0501075_0005755 3300049591 Bacteria 8479
271 Ga0501075_0013951 3300049591 Bacteria 5748
272 Ga0501075_0051124 3300049591 Bacteria 3107
273 Ga0501076_0013242 3300049592 Bacteria 6183
274 Ga0501076_0021140 3300049592 Bacteria 4987
275 Ga0501077_0090774 3300049593 Bacteria 1936
276 Ga0501079_0032437 3300049741 Bacteria 4016
277 Ga0501079_0062548 3300049741 Bacteria 2871
278 Ga0501079_0092480 3300049741 Bacteria 2343
279 Ga0501079_0120732 3300049741 Bacteria 2038
280 Ga0501081_0002476 3300049743 Bacteria 11636
281 Ga0501083_0119135 3300049744 Bacteria 1732
282 Ga0501035_0092721 3300049822 Bacteria 2657
283 Ga0501035_0134675 3300049822 Bacteria 2152
284 Ga0501044_0006636 3300049823 Bacteria 12758
285 Ga0501044_0072877 3300049823 Bacteria 3491
286 Ga0501045_0004605 3300049824 Bacteria 9523
287 Ga0501045_0021707 3300049824 Bacteria 4595
288 Ga0501045_0112632 3300049824 Bacteria 2017
289 Ga0501045_0149036 3300049824 Bacteria 1740
290 Ga0501045_0198988 3300049824 Bacteria 1493
291 Ga0501045_0219169 3300049824 Bacteria 1417
292 nmdc:mga0k408_6471_c1 3300050493 Bacteria 6240
293 nmdc:mga05p37_107218_c1 3300050507 Bacteria 3437
294 nmdc:mga05p37_156529_c1 3300050507 Bacteria 2784
295 nmdc:mga05p37_160509_c1 3300050507 Bacteria 2746
296 nmdc:mga05p37_176676_c1 3300050507 Bacteria 2601
297 nmdc:mga05p37_17837_c1 3300050507 Bacteria 8569
298 nmdc:mga05p37_17858_c1 3300050507 Bacteria 8563
299 nmdc:mga05p37_18889_c1 3300050507 Bacteria 8333
300 nmdc:mga05p37_189657_c1 3300050507 Bacteria 2497
301 nmdc:mga05p37_243781_c1 3300050507 Bacteria 2159
302 nmdc:mga05p37_81828_c1 3300050507 Bacteria 3978
303 nmdc:mga09592_87740_c1 3300050508 Bacteria 2656
304 nmdc:mga06r32_148540_c1 3300050510 Bacteria 2321
305 nmdc:mga06r32_16528_c1 3300050510 Bacteria 6726
306 nmdc:mga08y16_1369_c1 3300050511 Bacteria 24366
307 nmdc:mga08y16_15776_c1 3300050511 Bacteria 7944
308 nmdc:mga08y16_18380_c1 3300050511 Bacteria 7369
309 nmdc:mga08y16_194879_c1 3300050511 Bacteria 2101
310 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
311 nmdc:mga08y16_4286_c1 3300050511 Bacteria 14889
312 nmdc:mga08y16_43854_c1 3300050511 Bacteria 4687
313 nmdc:mga08y16_5934_c1 3300050511 Bacteria 12801
314 nmdc:mga0n895_147217_c1 3300050512 Bacteria 2385
315 nmdc:mga0n895_16738_c1 3300050512 Bacteria 6737
316 nmdc:mga0n895_294461_c1 3300050512 Bacteria 1645
317 nmdc:mga0n895_567_c1 3300050512 Bacteria 25311
318 nmdc:mga0n895_88793_c1 3300050512 Bacteria 3091
319 nmdc:mga0rr50_114_c1 3300050513 Bacteria 44678
320 nmdc:mga0rr50_1682_c1 3300050513 Bacteria 12203
321 nmdc:mga0rr50_52172_c1 3300050513 Bacteria 3038
322 nmdc:mga0rr50_62874_c1 3300050513 Bacteria 2802
323 nmdc:mga0rr50_75447_c1 3300050513 Bacteria 2585
324 nmdc:mga08x19_46797_c1 3300050514 Bacteria 2768
325 nmdc:mga08x19_53245_c1 3300050514 Bacteria 2604
326 nmdc:mga08x19_7334_c1 3300050514 Bacteria 6551
327 nmdc:mga08x19_80607_c1 3300050514 Bacteria 2137
328 nmdc:mga08x19_9624_c1 3300050514 Bacteria 5788
329 nmdc:mga0a205_125105_c1 3300050515 Bacteria 2470
330 nmdc:mga0a205_26035_c1 3300050515 Bacteria 5573
331 nmdc:mga0a205_36642_c1 3300050515 Bacteria 4714
332 nmdc:mga0a205_90898_c1 3300050515 Bacteria 2949
333 nmdc:mga0a205_99910_c1 3300050515 Bacteria 2800
334 Ga0495619_0047304 3300053085 Bacteria 2832
335 Ga0495619_0104296 3300053085 Bacteria 1932
336 Ga0501084_0020122 3300054114 Bacteria 5564
337 Ga0501084_0039364 3300054114 Bacteria 3954
338 Ga0501084_0047559 3300054114 Bacteria 3593
339 Ga0501084_0082575 3300054114 Bacteria 2697
340 Ga0501084_0161412 3300054114 Bacteria 1891
341 Ga0501084_0229075 3300054114 Bacteria 1568
342 Ga0590071_023139 3300059421 Bacteria 1467
343 Ga0501082_0003257 3300060353 Bacteria 14170
344 Ga0501082_0093285 3300060353 Bacteria 2601
345 Ga0501082_0162970 3300060353 Bacteria 1938
346 Ga0530510_0012312 3300061734 Bacteria 6008
347 nmdc:mga0a205_183592_c1
348 Ga0065715_10006892
349 Ga0070658_10048456
350 Ga0070676_10071099
351 Ga0070683_100113219
352 Ga0070683_100233996
353 Ga0070670_100046424
354 Ga0070666_10018509
355 Ga0070666_10215364
356 Ga0068868_100017048
357 Ga0068868_100080538
358 Ga0068868_100121423
359 Ga0070660_100038655
360 Ga0070689_100060048
361 Ga0070689_100105436
362 Ga0070692_10036360
363 Ga0070668_100153636
364 Ga0070669_100000232
365 Ga0070675_100000055
366 Ga0070675_100081200
367 Ga0070674_100008789
368 Ga0070688_100142718
369 Ga0070714_100000543
370 Ga0070713_100172788
371 Ga0070700_100005782
372 Ga0070694_100047281
373 Ga0070708_100081708
374 Ga0070708_100234424
375 Ga0070678_100043725
376 Ga0070681_10004061
377 Ga0070681_10153457
378 Ga0068867_100038843
379 Ga0070707_100051715
380 Ga0070698_100028768
381 Ga0070698_100203908
382 Ga0070699_100006906
383 Ga0070699_100127713
384 Ga0070684_100127813
385 Ga0070697_100023868
386 Ga0070672_100016899
387 Ga0070686_100000926
388 Ga0070695_100002313
389 Ga0070695_100011098
390 Ga0070695_100146217
391 Ga0070665_100013217
392 Ga0070665_100016697
393 Ga0070665_100144341
394 Ga0070704_100016935
395 Ga0070704_100093716
396 Ga0068855_100034804
397 Ga0068857_100071284
398 Ga0068857_100093278
399 Ga0068854_100099930
400 Ga0068859_100075216
401 Ga0068859_100242457
402 Ga0068861_100019680
403 Ga0068863_100033416
404 Ga0068863_100068129
405 Ga0068863_100190483
406 Ga0068858_100006437
407 Ga0068858_100122758
408 Ga0068860_100049393
409 Ga0068862_100005212
410 Ga0068862_100089125
411 Ga0068862_100095517
412 Ga0068862_100293116
413 Ga0070717_10244086
414 Ga0075367_10029675
415 Ga0075366_10062112
416 Ga0097621_100013120
417 Ga0097621_100030615
418 Ga0097621_100146746
419 Ga0068871_100013238
420 Ga0068871_100058017
421 Ga0068871_100073285
422 Ga0075428_100000108
423 Ga0075428_100018860
424 Ga0075431_100094148
425 Ga0075433_10066553
426 Ga0075433_10205108
427 Ga0075434_100007565
428 Ga0075434_100025052
429 Ga0075434_100081357
430 Ga0075434_100158709
431 Ga0075436_100003532
432 Ga0075436_100014961
433 Ga0075436_100027530
434 Ga0075436_100098477
435 Ga0075436_100133058
436 Ga0097620_100075222
437 Ga0097620_100242479
438 Ga0097620_100352539
439 Ga0075435_100000982
440 Ga0075435_100007318
441 Ga0075435_100007416
442 Ga0075435_100014716
443 Ga0075435_100288407
444 Ga0105240_10066249
445 Ga0105240_10081193
446 Ga0105240_10110897
447 Ga0111539_10000001
448 Ga0111539_10001440
449 Ga0111539_10004897
450 Ga0111539_10012966
451 Ga0111539_10014309
452 Ga0105247_10006370
453 Ga0105247_10026679
454 Ga0114129_10005172
455 Ga0114129_10005698
456 Ga0114129_10018144
457 Ga0114129_10025369
458 Ga0114129_10033052
459 Ga0114129_10053937
460 Ga0114129_10068939
461 Ga0114129_10087702
462 Ga0114129_10105962
463 Ga0114129_10115560
464 Ga0114129_10245710
465 Ga0114129_10388522
466 Ga0105241_10023415
467 Ga0105242_10008060
468 Ga0105242_10011698
469 Ga0105248_10048889
470 Ga0105248_10106006
471 Ga0105248_10151019
472 Ga0105248_10162266
473 Ga0105237_10271424
474 Ga0105246_10065092
475 Ga0157374_10041886
476 Ga0157378_10060594
477 Ga0157375_10409107
478 Ga0163163_10000017
479 Ga0163163_10003074
480 Ga0163163_10029340
481 Ga0157380_10000592
482 Ga0157379_10081428
483 Ga0157379_10099438
484 Ga0157379_10338440
485 Ga0157376_10027353
486 Ga0207710_10005045
487 Ga0207688_10062287
488 Ga0207680_10100945
489 Ga0207645_10006324
490 Ga0207643_10094374
491 Ga0207705_10139083
492 Ga0207707_10009702
493 Ga0207662_10017446
494 Ga0207646_10051360
495 Ga0207681_10012804
496 Ga0207681_10020774
497 Ga0207681_10030722
498 Ga0207681_10046011
499 Ga0207694_10199885
500 Ga0207650_10029091
501 Ga0207659_10027313
502 Ga0207659_10254170
503 Ga0207687_10079999
504 Ga0207664_10001732
505 Ga0207664_10170101
506 Ga0207644_10041889
507 Ga0207686_10014850
508 Ga0207686_10026928
509 Ga0207670_10031831
510 Ga0207704_10012341
511 Ga0207704_10055930
512 Ga0207691_10073103
513 Ga0207691_10091882
514 Ga0207711_10048666
515 Ga0207711_10060466
516 Ga0207711_10075974
517 Ga0207711_10118092
518 Ga0207711_10134141
519 Ga0207711_10217786
520 Ga0207661_10172779
521 Ga0207667_10224905
522 Ga0207712_10027819
523 Ga0207703_10031097
524 Ga0207639_10177179
525 Ga0207641_10022186
526 Ga0207648_10031357
527 Ga0207648_10245178
528 Ga0207676_10012077
529 Ga0207674_10075620
530 Ga0207675_100018670
531 Ga0207683_10035017
532 Ga0207683_10243233
533 Ga0207428_10000002
534 Ga0207428_10002456
535 Ga0207428_10014637
536 Ga0207428_10015437
537 Ga0207428_10036430
538 Ga0268266_10034080
539 Ga0268266_10155095
540 Ga0268265_10008952
541 Ga0268265_10014307
542 Ga0268265_10087890
543 Ga0268264_10040716
544 Ga0307413_10071923
545 Ga0307414_10036381
546 Ga0373948_0000616
547 Ga0373934_0011937
548 Ga0373949_0001817
549 Ga0373932_0003111
550 Ga0373941_0000162
551 Ga0373941_0009285
552 Ga0373960_0000007
553 Ga0373955_0008316
554 Ga0373942_0001338
555 Ga0373962_0000568
556 Ga0373931_0001425
557 Ga0373927_0058610
558 Ga0373933_0021689
559 Ga0373933_0219643
560 Ga0373947_0131645
561 Ga0373937_0000499
562 Ga0373937_0094068
563 Ga0439450_020849
564 Ga0439462_0010947
565 Ga0450923_002682
566 Ga0450898_011881
567 Ga0439460_0011942
568 Ga0451576_0005743
569 Ga0495651_0087914
570 Ga0495621_0075816
571 Ga0495645_0035066
572 Ga0495633_0109650
573 Ga0495647_0027198
574 Ga0495658_0074860
575 Ga0495669_0052702
576 Ga0495684_0151201
577 Ga0496100_0006282
578 Ga0496101_0000222
579 Ga0496104_0001478
580 Ga0496104_0012796
581 Ga0496105_0233086
582 Ga0496107_0011835
583 Ga0496108_0021526
584 Ga0496109_0061950
585 Ga0496109_0071675
586 Ga0496112_0014577
587 Ga0496112_0049760
588 Ga0496112_0153523
589 Ga0496113_0022978
590 Ga0496113_0107813
591 Ga0496113_0282803
592 Ga0496114_0000416
593 Ga0496114_0042936
594 Ga0496114_0388204
595 Ga0501033_0036077
596 Ga0501034_0257952
597 Ga0501036_0034590
598 Ga0501036_0061366
599 Ga0501039_0048195
600 Ga0501039_0131537
601 Ga0501039_0138110
602 Ga0501041_0003458
603 Ga0501042_0014921
604 Ga0501042_0021928
605 Ga0501043_0025863
606 Ga0501043_0141766
607 Ga0501043_0165349
608 Ga0501047_0052507
609 Ga0501048_0023241
610 Ga0501068_0055716
611 Ga0501072_0026624
612 Ga0501072_0027940
613 Ga0501072_0043905
614 Ga0501073_0000842
615 Ga0501074_0140435
616 Ga0501075_0005755
617 Ga0501075_0013951
618 Ga0501075_0051124
619 Ga0501076_0013242
620 Ga0501076_0021140
621 Ga0501077_0090774
622 Ga0501079_0032437
623 Ga0501079_0062548
624 Ga0501079_0092480
625 Ga0501079_0120732
626 Ga0501081_0002476
627 Ga0501083_0119135
628 Ga0501035_0092721
629 Ga0501035_0134675
630 Ga0501044_0006636
631 Ga0501044_0072877
632 Ga0501045_0004605
633 Ga0501045_0021707
634 Ga0501045_0112632
635 Ga0501045_0149036
636 Ga0501045_0198988
637 Ga0501045_0219169
638 nmdc:mga0k408_6471_c1
639 nmdc:mga05p37_107218_c1
640 nmdc:mga05p37_156529_c1
641 nmdc:mga05p37_160509_c1
642 nmdc:mga05p37_176676_c1
643 nmdc:mga05p37_17837_c1
644 nmdc:mga05p37_17858_c1
645 nmdc:mga05p37_18889_c1
646 nmdc:mga05p37_189657_c1
647 nmdc:mga05p37_243781_c1
648 nmdc:mga05p37_81828_c1
649 nmdc:mga09592_87740_c1
650 nmdc:mga06r32_148540_c1
651 nmdc:mga06r32_16528_c1
652 nmdc:mga08y16_1369_c1
653 nmdc:mga08y16_15776_c1
654 nmdc:mga08y16_18380_c1
655 nmdc:mga08y16_194879_c1
656 nmdc:mga08y16_3_c1
657 nmdc:mga08y16_4286_c1
658 nmdc:mga08y16_43854_c1
659 nmdc:mga08y16_5934_c1
660 nmdc:mga0n895_147217_c1
661 nmdc:mga0n895_16738_c1
662 nmdc:mga0n895_294461_c1
663 nmdc:mga0n895_567_c1
664 nmdc:mga0n895_88793_c1
665 nmdc:mga0rr50_114_c1
666 nmdc:mga0rr50_1682_c1
667 nmdc:mga0rr50_52172_c1
668 nmdc:mga0rr50_62874_c1
669 nmdc:mga0rr50_75447_c1
670 nmdc:mga08x19_46797_c1
671 nmdc:mga08x19_53245_c1
672 nmdc:mga08x19_7334_c1
673 nmdc:mga08x19_80607_c1
674 nmdc:mga08x19_9624_c1
675 nmdc:mga0a205_125105_c1
676 nmdc:mga0a205_26035_c1
677 nmdc:mga0a205_36642_c1
678 nmdc:mga0a205_90898_c1
679 nmdc:mga0a205_99910_c1
680 Ga0495619_0047304
681 Ga0495619_0104296
682 Ga0501084_0020122
683 Ga0501084_0039364
684 Ga0501084_0047559
685 Ga0501084_0082575
686 Ga0501084_0161412
687 Ga0501084_0229075
688 Ga0590071_023139
689 Ga0501082_0003257
690 Ga0501082_0093285
691 Ga0501082_0162970
692 Ga0530510_0012312

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08442

ATP-grasp_2

ATP-grasp domain

39

239

0.99

PF00549

Ligase_CoA

CoA-ligase

298

418

0.98

PF13549

ATP-grasp_5

ATP-grasp domain

37

184

0.82

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

42

175

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
5cae-assembly1.cif.gz_B succinate bound to pig gtp-specific succinyl-coa synthetase 0.9076 1 356
5cae-assembly1.cif.gz_B succinate bound to pig gtp-specific succinyl-coa synthetase 0.8982 1 356
1euc-assembly1.cif.gz_B crystal structure of dephosphorylated pig heart, gtp-specific succinyl-coa synthetase 0.8903 3 356
6no0-assembly1.cif.gz_A adp bound to atp-grasp fold of blastocystis hominis succinyl-coa synthetase 0.8875 1 191
7jj0-assembly2.cif.gz_D gtp-specific succinyl-coa synthetase complexed with mg-gmppcp 0.8823 1 359
ID Description Score Start End Superfamily
1jkjB01 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9688 1 212 3.30.470.20
4xx0B03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Succinyl-CoA synthetase domains 0.9639 213 357 3.40.50.261
1jkjB01 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9627 1 212 3.30.470.20
af_A0A1D6HDG8_329_429_3.40.50.261 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Succinyl-CoA synthetase domains 0.9593 213 311 3.40.50.261
4xx0B01 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9561 5 212 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A0T6AH14-F1-model_v4 Succinyl-CoA synthetase subunit beta, succinyl-CoA synthetase beta subunit (EC 6.2.1.5) 0.994 226 359 GO:0000166
GO:0004775
GO:0005829
GO:0006099
GO:0006104
GO:0042709
AF-A0A5D2F2W1-F1-model_v4 ATP-citrate synthase/succinyl-CoA ligase C-terminal domain-containing protein 0.993 268 358 GO:0004775
GO:0005739
GO:0006099
GO:0006104
GO:0042709
AF-X0X132-F1-model_v4 ATP-citrate synthase/succinyl-CoA ligase C-terminal domain-containing protein 0.9914 237 358 GO:0004775
GO:0006099
GO:0006104
GO:0042709
AF-A0A831UPT9-F1-model_v4 Succinate--CoA ligase subunit beta (EC 6.2.1.5) 0.9912 240 358 GO:0004775
GO:0005829
GO:0006099
GO:0006104
GO:0042709
AF-A0A7J8WBF8-F1-model_v4 ATP-citrate synthase/succinyl-CoA ligase C-terminal domain-containing protein 0.991 243 358 GO:0004775
GO:0005739
GO:0006099
GO:0006104
GO:0042709

Map