F416686

General Info

Members Datasets Scaffolds Average Seq Length
346 180 692 348

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100094362|Ga0070697_1000943623
Length 391
Sequence VRFDLVLVGFGNVARRFVSLLREQRATLQHDYGFTTRIVGIATKRHGQIYSPRGVNIRPGADASTLVLSRVGERALRAGTSVGPYGKIADSDPVVGADPRVRPNSAADFIRDAVGRSAPAAREGRLVVIETTTLDVEAGQPAIDHVRSALSGGAHVVTANKGPVAFAYHDLTRRAQRARRRFLFEGAVMDGIPIFNLVRETLPAVKITGFRGVVNSTTNFILTAMEQGQAFEQALAEMLAVGIAEADPSLDVDGWDAAAKAAALANVLLGARLTPRTVERQGITPEIGPRAVNARRAGRRVKLVARAGREGARITARVSPEELPEDDLLAGLEGQQNALILHTDLLGEMAIVQRGGGLTQTAYALVSDLVTIARSRNEPRRRWRASRRSRP

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
103 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
104 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
105 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
112 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
113 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
114 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
115 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
116 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
117 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
118 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
119 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
120 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
121 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
122 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
123 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
124 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
125 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
126 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
129 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
130 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
131 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
132 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
137 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
138 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
139 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
140 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
141 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
146 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
155 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
174 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
175 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
178 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.31
Nodule 0
Rhizoplane 2.31
Rhizosphere 95.38
Stem 0
Stem Tuber 0
Unclassified 8.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100094362 3300005536 Bacteria 2479
2 Ga0070676_10019658 3300005328 Bacteria 3762
3 Ga0070676_10165554 3300005328 Unclassified 1426
4 Ga0070670_100043423 3300005331 Bacteria 3864
5 Ga0070666_10017250 3300005335 Bacteria 4627
6 Ga0068868_100065015 3300005338 Bacteria 2897
7 Ga0070689_100025246 3300005340 Bacteria 4463
8 Ga0070691_10003630 3300005341 Bacteria 6965
9 Ga0070687_100009583 3300005343 Bacteria 4156
10 Ga0070669_100010902 3300005353 Bacteria 6453
11 Ga0070669_100028783 3300005353 Bacteria 4002
12 Ga0070669_100031705 3300005353 Bacteria 3818
13 Ga0070675_100001471 3300005354 Bacteria 17360
14 Ga0070675_100319738 3300005354 Bacteria 1371
15 Ga0070674_100020134 3300005356 Bacteria 4255
16 Ga0070673_100200449 3300005364 Bacteria 1718
17 Ga0070688_100002844 3300005365 Bacteria 8820
18 Ga0070667_100008245 3300005367 Bacteria 8636
19 Ga0070703_10046818 3300005406 Bacteria 1368
20 Ga0070709_10116218 3300005434 Bacteria 1806
21 Ga0070705_100124413 3300005440 Bacteria 1671
22 Ga0070700_100038860 3300005441 Bacteria 2903
23 Ga0070700_100138132 3300005441 Bacteria 1653
24 Ga0070694_100004344 3300005444 Bacteria 8521
25 Ga0070681_10025553 3300005458 Bacteria 5941
26 Ga0068867_100062094 3300005459 Bacteria 2775
27 Ga0068867_100125949 3300005459 Bacteria 1985
28 Ga0070706_100348679 3300005467 Bacteria 1380
29 Ga0070707_100066936 3300005468 Bacteria 3454
30 Ga0070699_100125295 3300005518 Bacteria 2261
31 Ga0070699_100318244 3300005518 Bacteria 1398
32 Ga0068853_100179925 3300005539 Bacteria 1917
33 Ga0070672_100008720 3300005543 Bacteria 6959
34 Ga0070672_100190570 3300005543 Bacteria 1712
35 Ga0070695_100005595 3300005545 Bacteria 7399
36 Ga0070696_100003693 3300005546 Bacteria 10207
37 Ga0070665_100003400 3300005548 Bacteria 17010
38 Ga0070665_100401185 3300005548 Unclassified 1379
39 Ga0070704_100015743 3300005549 Unclassified 4761
40 Ga0070704_100026835 3300005549 Bacteria 3811
41 Ga0068854_100021804 3300005578 Bacteria 4353
42 Ga0068859_100061196 3300005617 Bacteria 3793
43 Ga0068864_100011842 3300005618 Bacteria 7204
44 Ga0068864_100052173 3300005618 Bacteria 3525
45 Ga0068864_100131916 3300005618 Bacteria 2245
46 Ga0068861_100010459 3300005719 Bacteria 6439
47 Ga0068861_100012452 3300005719 Bacteria 5936
48 Ga0068863_100001594 3300005841 Bacteria 22409
49 Ga0068858_100032643 3300005842 Bacteria 4834
50 Ga0068858_100088309 3300005842 Bacteria 2884
51 Ga0068858_100201478 3300005842 Bacteria 1882
52 Ga0068860_100323842 3300005843 Bacteria 1513
53 Ga0068862_100167890 3300005844 Bacteria 1963
54 Ga0081455_10030568 3300005937 Bacteria 4890
55 Ga0081539_10009255 3300005985 Bacteria 8286
56 Ga0075365_10001292 3300006038 Bacteria 11157
57 Ga0075364_10030263 3300006051 Bacteria 3474
58 Ga0075367_10027873 3300006178 Bacteria 3217
59 Ga0097621_100027715 3300006237 Bacteria 4457
60 Ga0075370_10006820 3300006353 Bacteria 5774
61 Ga0068871_100014691 3300006358 Bacteria 5843
62 Ga0068871_100072352 3300006358 Bacteria 2839
63 Ga0068871_100080797 3300006358 Bacteria 2692
64 Ga0075428_100000086 3300006844 Bacteria 77110
65 Ga0075428_100010901 3300006844 Bacteria 10109
66 Ga0075428_100355233 3300006844 Bacteria 1572
67 Ga0075430_100000028 3300006846 Bacteria 74712
68 Ga0075430_100050888 3300006846 Unclassified 3492
69 Ga0075431_100003561 3300006847 Bacteria 15078
70 Ga0075431_100012648 3300006847 Bacteria 8523
71 Ga0075431_100032921 3300006847 Bacteria 5342
72 Ga0075433_10047590 3300006852 Bacteria 3731
73 Ga0075433_10066670 3300006852 Bacteria 3158
74 Ga0075434_100000100 3300006871 Bacteria 48123
75 Ga0075434_100024212 3300006871 Bacteria 5933
76 Ga0075434_100190806 3300006871 Unclassified 2069
77 Ga0075434_100199796 3300006871 Bacteria 2019
78 Ga0075429_100002918 3300006880 Bacteria 14503
79 Ga0075429_100013486 3300006880 Bacteria 7089
80 Ga0075429_100028101 3300006880 Bacteria 4882
81 Ga0075429_100051624 3300006880 Bacteria 3578
82 Ga0068865_100009547 3300006881 Bacteria 6022
83 Ga0075436_100000583 3300006914 Bacteria 23900
84 Ga0075436_100008075 3300006914 Bacteria 7204
85 Ga0075436_100017503 3300006914 Bacteria 4908
86 Ga0075436_100081696 3300006914 Bacteria 2241
87 Ga0097620_100061197 3300006931 Bacteria 3793
88 Ga0075435_100000192 3300007076 Bacteria 36826
89 Ga0075435_100003636 3300007076 Bacteria 10496
90 Ga0075435_100032216 3300007076 Bacteria 4138
91 Ga0075435_100043188 3300007076 Bacteria 3608
92 Ga0075435_100059823 3300007076 Bacteria 3088
93 Ga0075435_100072731 3300007076 Bacteria 2809
94 Ga0075435_100313584 3300007076 Unclassified 1342
95 Ga0105240_10182024 3300009093 Bacteria 2479
96 Ga0111539_10000166 3300009094 Bacteria 76156
97 Ga0111539_10012733 3300009094 Bacteria 10533
98 Ga0111539_10015708 3300009094 Bacteria 9409
99 Ga0111539_10016316 3300009094 Bacteria 9207
100 Ga0111539_10021694 3300009094 Bacteria 7899
101 Ga0111539_10131952 3300009094 Bacteria 2925
102 Ga0111539_10505767 3300009094 Bacteria 1407
103 Ga0111539_10551034 3300009094 Unclassified 1343
104 Ga0111539_10648519 3300009094 Bacteria 1229
105 Ga0105245_10083336 3300009098 Bacteria 2927
106 Ga0105247_10004860 3300009101 Bacteria 8548
107 Ga0114129_10000148 3300009147 Bacteria 74039
108 Ga0114129_10000434 3300009147 Bacteria 49632
109 Ga0114129_10002946 3300009147 Bacteria 23809
110 Ga0114129_10013888 3300009147 Bacteria 11476
111 Ga0114129_10014154 3300009147 Bacteria 11366
112 Ga0114129_10015556 3300009147 Bacteria 10816
113 Ga0114129_10025515 3300009147 Bacteria 8375
114 Ga0114129_10040311 3300009147 Bacteria 6583
115 Ga0114129_10087158 3300009147 Bacteria 4330
116 Ga0114129_10089613 3300009147 Bacteria 4264
117 Ga0114129_10111300 3300009147 Unclassified 3778
118 Ga0114129_10142370 3300009147 Bacteria 3286
119 Ga0114129_10333062 3300009147 Unclassified 2015
120 Ga0114129_10422473 3300009147 Bacteria 1753
121 Ga0105243_10006011 3300009148 Bacteria 9396
122 Ga0105243_10014251 3300009148 Bacteria 6015
123 Ga0105242_10097007 3300009176 Bacteria 2492
124 Ga0105248_10001706 3300009177 Bacteria 24451
125 Ga0105248_10020727 3300009177 Bacteria 7283
126 Ga0105248_10045670 3300009177 Bacteria 4911
127 Ga0105248_10162986 3300009177 Bacteria 2514
128 Ga0105249_10117504 3300009553 Bacteria 2523
129 Ga0157378_10252831 3300013297 Bacteria 1688
130 Ga0157375_10094605 3300013308 Bacteria 3057
131 Ga0157375_10138844 3300013308 Bacteria 2556
132 Ga0157375_10346562 3300013308 Bacteria 1651
133 Ga0163163_10027079 3300014325 Bacteria 5485
134 Ga0163163_10101624 3300014325 Bacteria 2897
135 Ga0163163_10106989 3300014325 Bacteria 2823
136 Ga0157380_10005606 3300014326 Bacteria 8771
137 Ga0157380_10086945 3300014326 Bacteria 2570
138 Ga0157380_10289269 3300014326 Bacteria 1504
139 Ga0157380_10343915 3300014326 Bacteria 1393
140 Ga0157377_10066188 3300014745 Unclassified 2077
141 Ga0157379_10003996 3300014968 Bacteria 12574
142 Ga0157379_10058276 3300014968 Bacteria 3453
143 Ga0157376_10003823 3300014969 Bacteria 10412
144 Ga0207680_10031417 3300025903 Bacteria 3007
145 Ga0207645_10015765 3300025907 Bacteria 5011
146 Ga0207645_10165374 3300025907 Unclassified 1448
147 Ga0207684_10318797 3300025910 Bacteria 1340
148 Ga0207707_10050299 3300025912 Bacteria 3631
149 Ga0207695_10121755 3300025913 Bacteria 2576
150 Ga0207695_10203930 3300025913 Bacteria 1891
151 Ga0207662_10015898 3300025918 Bacteria 4239
152 Ga0207652_10321057 3300025921 Unclassified 1398
153 Ga0207646_10150628 3300025922 Bacteria 2098
154 Ga0207681_10006722 3300025923 Bacteria 7056
155 Ga0207706_10029766 3300025933 Bacteria 4872
156 Ga0207706_10155335 3300025933 Bacteria 2012
157 Ga0207709_10028254 3300025935 Bacteria 3242
158 Ga0207670_10012891 3300025936 Bacteria 4909
159 Ga0207669_10121003 3300025937 Bacteria 1777
160 Ga0207691_10033013 3300025940 Bacteria 4822
161 Ga0207691_10146318 3300025940 Bacteria 2080
162 Ga0207711_10008949 3300025941 Bacteria 8370
163 Ga0207689_10193929 3300025942 Bacteria 1676
164 Ga0207712_10108102 3300025961 Bacteria 2081
165 Ga0207640_10029862 3300025981 Bacteria 3351
166 Ga0207658_10008457 3300025986 Bacteria 7004
167 Ga0207703_10017991 3300026035 Bacteria 5519
168 Ga0207703_10119591 3300026035 Bacteria 2260
169 Ga0207703_10121799 3300026035 Bacteria 2240
170 Ga0207703_10174661 3300026035 Bacteria 1892
171 Ga0207703_10227682 3300026035 Unclassified 1670
172 Ga0207708_10005444 3300026075 Bacteria 9390
173 Ga0207708_10098085 3300026075 Unclassified 2265
174 Ga0207708_10139446 3300026075 Bacteria 1901
175 Ga0207708_10254773 3300026075 Bacteria 1415
176 Ga0207641_10000431 3300026088 Bacteria 48383
177 Ga0207641_10223521 3300026088 Bacteria 1747
178 Ga0207648_10011824 3300026089 Bacteria 8203
179 Ga0207648_10020532 3300026089 Bacteria 5947
180 Ga0207648_10072903 3300026089 Bacteria 2993
181 Ga0207648_10201587 3300026089 Bacteria 1765
182 Ga0207676_10009941 3300026095 Bacteria 6766
183 Ga0207675_100000451 3300026118 Bacteria 39879
184 Ga0207428_10000251 3300027907 Bacteria 73186
185 Ga0207428_10003068 3300027907 Bacteria 16439
186 Ga0207428_10023023 3300027907 Bacteria 5245
187 Ga0207428_10027171 3300027907 Bacteria 4766
188 Ga0268266_10007237 3300028379 Bacteria 10034
189 Ga0268266_10025331 3300028379 Bacteria 5046
190 Ga0268266_10358770 3300028379 Unclassified 1371
191 Ga0268265_10098227 3300028380 Bacteria 2358
192 Ga0307408_100026220 3300031548 Bacteria 4000
193 Ga0307405_10152799 3300031731 Bacteria 1625
194 Ga0307405_10219843 3300031731 Bacteria 1393
195 Ga0307405_10346199 3300031731 Bacteria 1145
196 Ga0307413_10163776 3300031824 Bacteria 1565
197 Ga0307410_10103403 3300031852 Bacteria 2046
198 Ga0307406_10141156 3300031901 Unclassified 1705
199 Ga0307412_10026509 3300031911 Bacteria 3603
200 Ga0307412_10030128 3300031911 Bacteria 3412
201 Ga0307412_10244365 3300031911 Bacteria 1390
202 Ga0307409_100054376 3300031995 Bacteria 3083
203 Ga0307409_100179487 3300031995 Bacteria 1873
204 Ga0307416_100041660 3300032002 Bacteria 3578
205 Ga0307416_100052559 3300032002 Bacteria 3263
206 Ga0307416_100217096 3300032002 Bacteria 1830
207 Ga0307416_100438414 3300032002 Bacteria 1356
208 Ga0307414_10038728 3300032004 Bacteria 3205
209 Ga0307411_10045125 3300032005 Bacteria 2833
210 Ga0373948_0001374 3300034817 Bacteria 3350
211 Ga0373959_0001437 3300034820 Bacteria 3803
212 Ga0373938_0000670 3300034957 Bacteria 5489
213 Ga0373928_0011748 3300035084 Bacteria 1738
214 Ga0373929_0000990 3300035085 Bacteria 5517
215 Ga0373940_0000344 3300035088 Bacteria 6919
216 Ga0373949_0001028 3300035090 Bacteria 8583
217 Ga0373952_0000050 3300035092 Bacteria 14460
218 Ga0373932_0001217 3300035112 Bacteria 7308
219 Ga0373939_0000156 3300035114 Bacteria 19023
220 Ga0373946_0039917 3300035171 Bacteria 1918
221 Ga0373942_0001569 3300035207 Bacteria 5860
222 Ga0373961_0001988 3300035241 Bacteria 5496
223 Ga0373962_0000398 3300035242 Bacteria 9512
224 Ga0373931_0000411 3300035691 Bacteria 17541
225 Ga0373947_0005679 3300035725 Bacteria 7278
226 Ga0373947_0071509 3300035725 Bacteria 2128
227 Ga0373937_0256915 3300036401 Bacteria 1647
228 Ga0439453_0001187 3300041408 Bacteria 3274
229 Ga0439446_0026633 3300042156 Bacteria 1657
230 Ga0439446_0029921 3300042156 Bacteria 1573
231 Ga0439464_0000538 3300042439 Bacteria 7841
232 Ga0439464_0013506 3300042439 Bacteria 2187
233 Ga0451577_0010402 3300042876 Bacteria 8898
234 Ga0466959_0053755 3300045049 Bacteria 2943
235 Ga0451576_0072441 3300045051 Bacteria 3585
236 Ga0451576_0252606 3300045051 Bacteria 1843
237 Ga0466958_0129514 3300045836 Bacteria 1584
238 Ga0466967_0182510 3300045976 Unclassified 1980
239 Ga0495629_0069695 3300046459 Bacteria 2454
240 Ga0495629_0089781 3300046459 Bacteria 2144
241 Ga0495582_0104971 3300046473 Bacteria 1584
242 Ga0495587_0153801 3300046536 Unclassified 1311
243 Ga0495645_0001334 3300046543 Bacteria 16733
244 Ga0495635_0169359 3300046663 Bacteria 1485
245 Ga0495658_0078821 3300046683 Bacteria 1929
246 Ga0496108_0118509 3300048911 Bacteria 2269
247 Ga0496110_0031221 3300048913 Bacteria 4596
248 Ga0496112_0006961 3300048915 Bacteria 9985
249 Ga0496112_0077332 3300048915 Bacteria 3291
250 Ga0496112_0078040 3300048915 Bacteria 3275
251 Ga0496114_0015512 3300048917 Bacteria 6125
252 Ga0496114_0072444 3300048917 Bacteria 2898
253 Ga0496115_0034581 3300048918 Bacteria 3994
254 Ga0501036_0112588 3300049572 Bacteria 2299
255 Ga0501036_0259375 3300049572 Bacteria 1456
256 Ga0501039_0033215 3300049575 Bacteria 3980
257 Ga0501039_0039156 3300049575 Bacteria 3661
258 Ga0501039_0081207 3300049575 Bacteria 2524
259 Ga0501040_0069607 3300049576 Bacteria 2427
260 Ga0501040_0249993 3300049576 Unclassified 1264
261 Ga0501041_0087911 3300049577 Bacteria 1918
262 Ga0501041_0172797 3300049577 Bacteria 1352
263 Ga0501042_0231410 3300049578 Unclassified 1333
264 Ga0501046_0190063 3300049580 Bacteria 1532
265 Ga0501048_0013600 3300049582 Bacteria 6039
266 Ga0501048_0166586 3300049582 Unclassified 1560
267 Ga0501071_0001911 3300049587 Bacteria 12397
268 Ga0501071_0022795 3300049587 Bacteria 4368
269 Ga0501071_0086591 3300049587 Bacteria 2298
270 Ga0501072_0065932 3300049588 Bacteria 2856
271 Ga0501073_0001122 3300049589 Bacteria 19419
272 Ga0501073_0035010 3300049589 Bacteria 3571
273 Ga0501075_0010318 3300049591 Bacteria 6564
274 Ga0501075_0041554 3300049591 Bacteria 3446
275 Ga0501075_0043073 3300049591 Bacteria 3386
276 Ga0501075_0071398 3300049591 Bacteria 2624
277 Ga0501076_0154030 3300049592 Bacteria 1870
278 Ga0501076_0365382 3300049592 Bacteria 1186
279 Ga0501221_008996 3300049704 Unclassified 1746
280 Ga0501079_0186174 3300049741 Unclassified 1621
281 Ga0501079_0203776 3300049741 Unclassified 1545
282 Ga0501081_0139976 3300049743 Bacteria 1734
283 Ga0501081_0240972 3300049743 Unclassified 1319
284 Ga0501045_0022991 3300049824 Bacteria 4467
285 Ga0501045_0065400 3300049824 Bacteria 2670
286 Ga0501045_0116897 3300049824 Unclassified 1979
287 nmdc:mga0yw44_81300_c1 3300050492 Bacteria 2031
288 nmdc:mga0yw44_8418_c1 3300050492 Bacteria 5139
289 nmdc:mga05p37_11139_c1 3300050507 Bacteria 10685
290 nmdc:mga05p37_199383_c1 3300050507 Bacteria 2425
291 nmdc:mga05p37_21482_c1 3300050507 Bacteria 7818
292 nmdc:mga05p37_221_c1 3300050507 Bacteria 57542
293 nmdc:mga05p37_26367_c1 3300050507 Bacteria 7068
294 nmdc:mga05p37_299700_c1 3300050507 Unclassified 1910
295 nmdc:mga05p37_37061_c1 3300050507 Bacteria 5982
296 nmdc:mga05p37_55815_c1 3300050507 Bacteria 4863
297 nmdc:mga05p37_61937_c1 3300050507 Bacteria 4605
298 nmdc:mga05p37_8651_c1 3300050507 Bacteria 12034
299 nmdc:mga09592_2641_c1 3300050508 Bacteria 14494
300 nmdc:mga09592_266475_c1 3300050508 Bacteria 1486
301 nmdc:mga09592_8855_c1 3300050508 Bacteria 8186
302 nmdc:mga0qj67_187408_c1 3300050509 Unclassified 1681
303 nmdc:mga0qj67_35205_c1 3300050509 Bacteria 3914
304 nmdc:mga0qj67_5533_c1 3300050509 Bacteria 9236
305 nmdc:mga06r32_228692_c1 3300050510 Bacteria 1848
306 nmdc:mga06r32_38767_c1 3300050510 Bacteria 4517
307 nmdc:mga06r32_50898_c1 3300050510 Bacteria 3963
308 nmdc:mga06r32_654_c1 3300050510 Bacteria 30275
309 nmdc:mga08y16_30542_c1 3300050511 Bacteria 5670
310 nmdc:mga08y16_346702_c1 3300050511 Bacteria 1526
311 nmdc:mga08y16_4545_c1 3300050511 Bacteria 14463
312 nmdc:mga08y16_464_c1 3300050511 Bacteria 37766
313 nmdc:mga08y16_8901_c1 3300050511 Bacteria 10540
314 nmdc:mga08y16_90098_c1 3300050511 Bacteria 3197
315 nmdc:mga08y16_91462_c1 3300050511 Bacteria 3171
316 nmdc:mga0n895_111_c1 3300050512 Bacteria 48235
317 nmdc:mga0n895_137530_c1 3300050512 Bacteria 2470
318 nmdc:mga0n895_182798_c1 3300050512 Unclassified 2128
319 nmdc:mga0n895_20329_c1 3300050512 Bacteria 6189
320 nmdc:mga0n895_5089_c1 3300050512 Bacteria 10920
321 nmdc:mga0n895_6455_c1 3300050512 Bacteria 9957
322 nmdc:mga0n895_78452_c1 3300050512 Bacteria 3287
323 nmdc:mga0rr50_467454_c1 3300050513 Unclassified 1070
324 nmdc:mga0rr50_50582_c1 3300050513 Archaea 3080
325 nmdc:mga0rr50_57_c1 3300050513 Bacteria 67718
326 nmdc:mga0rr50_63132_c1 3300050513 Bacteria 2796
327 nmdc:mga0rr50_9063_c1 3300050513 Bacteria 6228
328 nmdc:mga08x19_11626_c1 3300050514 Bacteria 5299
329 nmdc:mga08x19_426_c1 3300050514 Bacteria 28960
330 nmdc:mga08x19_44191_c1 3300050514 Bacteria 2844
331 nmdc:mga08x19_75971_c1 3300050514 Bacteria 2198
332 nmdc:mga0a205_13339_c1 3300050515 Bacteria 7645
333 nmdc:mga0a205_136241_c1 3300050515 Bacteria 2356
334 nmdc:mga0a205_44772_c1 3300050515 Bacteria 4267
335 nmdc:mga0a205_58090_c1 3300050515 Bacteria 3736
336 Ga0495619_0028279 3300053085 Bacteria 3616
337 Ga0495619_0042090 3300053085 Bacteria 2990
338 Ga0500556_0025364 3300053104 Bacteria 1958
339 Ga0500593_124785 3300053117 Bacteria 1038
340 Ga0501084_0016702 3300054114 Bacteria 6096
341 Ga0501084_0033832 3300054114 Bacteria 4276
342 Ga0590071_028669 3300059421 Unclassified 1323
343 Ga0590075_001527 3300059424 Bacteria 5760
344 Ga0501082_0181376 3300060353 Bacteria 1831
345 Ga0530510_0028959 3300061734 Bacteria 3973
346 Ga0530510_0053889 3300061734 Bacteria 2906
347 Ga0070697_100094362
348 Ga0070676_10019658
349 Ga0070676_10165554
350 Ga0070670_100043423
351 Ga0070666_10017250
352 Ga0068868_100065015
353 Ga0070689_100025246
354 Ga0070691_10003630
355 Ga0070687_100009583
356 Ga0070669_100010902
357 Ga0070669_100028783
358 Ga0070669_100031705
359 Ga0070675_100001471
360 Ga0070675_100319738
361 Ga0070674_100020134
362 Ga0070673_100200449
363 Ga0070688_100002844
364 Ga0070667_100008245
365 Ga0070703_10046818
366 Ga0070709_10116218
367 Ga0070705_100124413
368 Ga0070700_100038860
369 Ga0070700_100138132
370 Ga0070694_100004344
371 Ga0070681_10025553
372 Ga0068867_100062094
373 Ga0068867_100125949
374 Ga0070706_100348679
375 Ga0070707_100066936
376 Ga0070699_100125295
377 Ga0070699_100318244
378 Ga0068853_100179925
379 Ga0070672_100008720
380 Ga0070672_100190570
381 Ga0070695_100005595
382 Ga0070696_100003693
383 Ga0070665_100003400
384 Ga0070665_100401185
385 Ga0070704_100015743
386 Ga0070704_100026835
387 Ga0068854_100021804
388 Ga0068859_100061196
389 Ga0068864_100011842
390 Ga0068864_100052173
391 Ga0068864_100131916
392 Ga0068861_100010459
393 Ga0068861_100012452
394 Ga0068863_100001594
395 Ga0068858_100032643
396 Ga0068858_100088309
397 Ga0068858_100201478
398 Ga0068860_100323842
399 Ga0068862_100167890
400 Ga0081455_10030568
401 Ga0081539_10009255
402 Ga0075365_10001292
403 Ga0075364_10030263
404 Ga0075367_10027873
405 Ga0097621_100027715
406 Ga0075370_10006820
407 Ga0068871_100014691
408 Ga0068871_100072352
409 Ga0068871_100080797
410 Ga0075428_100000086
411 Ga0075428_100010901
412 Ga0075428_100355233
413 Ga0075430_100000028
414 Ga0075430_100050888
415 Ga0075431_100003561
416 Ga0075431_100012648
417 Ga0075431_100032921
418 Ga0075433_10047590
419 Ga0075433_10066670
420 Ga0075434_100000100
421 Ga0075434_100024212
422 Ga0075434_100190806
423 Ga0075434_100199796
424 Ga0075429_100002918
425 Ga0075429_100013486
426 Ga0075429_100028101
427 Ga0075429_100051624
428 Ga0068865_100009547
429 Ga0075436_100000583
430 Ga0075436_100008075
431 Ga0075436_100017503
432 Ga0075436_100081696
433 Ga0097620_100061197
434 Ga0075435_100000192
435 Ga0075435_100003636
436 Ga0075435_100032216
437 Ga0075435_100043188
438 Ga0075435_100059823
439 Ga0075435_100072731
440 Ga0075435_100313584
441 Ga0105240_10182024
442 Ga0111539_10000166
443 Ga0111539_10012733
444 Ga0111539_10015708
445 Ga0111539_10016316
446 Ga0111539_10021694
447 Ga0111539_10131952
448 Ga0111539_10505767
449 Ga0111539_10551034
450 Ga0111539_10648519
451 Ga0105245_10083336
452 Ga0105247_10004860
453 Ga0114129_10000148
454 Ga0114129_10000434
455 Ga0114129_10002946
456 Ga0114129_10013888
457 Ga0114129_10014154
458 Ga0114129_10015556
459 Ga0114129_10025515
460 Ga0114129_10040311
461 Ga0114129_10087158
462 Ga0114129_10089613
463 Ga0114129_10111300
464 Ga0114129_10142370
465 Ga0114129_10333062
466 Ga0114129_10422473
467 Ga0105243_10006011
468 Ga0105243_10014251
469 Ga0105242_10097007
470 Ga0105248_10001706
471 Ga0105248_10020727
472 Ga0105248_10045670
473 Ga0105248_10162986
474 Ga0105249_10117504
475 Ga0157378_10252831
476 Ga0157375_10094605
477 Ga0157375_10138844
478 Ga0157375_10346562
479 Ga0163163_10027079
480 Ga0163163_10101624
481 Ga0163163_10106989
482 Ga0157380_10005606
483 Ga0157380_10086945
484 Ga0157380_10289269
485 Ga0157380_10343915
486 Ga0157377_10066188
487 Ga0157379_10003996
488 Ga0157379_10058276
489 Ga0157376_10003823
490 Ga0207680_10031417
491 Ga0207645_10015765
492 Ga0207645_10165374
493 Ga0207684_10318797
494 Ga0207707_10050299
495 Ga0207695_10121755
496 Ga0207695_10203930
497 Ga0207662_10015898
498 Ga0207652_10321057
499 Ga0207646_10150628
500 Ga0207681_10006722
501 Ga0207706_10029766
502 Ga0207706_10155335
503 Ga0207709_10028254
504 Ga0207670_10012891
505 Ga0207669_10121003
506 Ga0207691_10033013
507 Ga0207691_10146318
508 Ga0207711_10008949
509 Ga0207689_10193929
510 Ga0207712_10108102
511 Ga0207640_10029862
512 Ga0207658_10008457
513 Ga0207703_10017991
514 Ga0207703_10119591
515 Ga0207703_10121799
516 Ga0207703_10174661
517 Ga0207703_10227682
518 Ga0207708_10005444
519 Ga0207708_10098085
520 Ga0207708_10139446
521 Ga0207708_10254773
522 Ga0207641_10000431
523 Ga0207641_10223521
524 Ga0207648_10011824
525 Ga0207648_10020532
526 Ga0207648_10072903
527 Ga0207648_10201587
528 Ga0207676_10009941
529 Ga0207675_100000451
530 Ga0207428_10000251
531 Ga0207428_10003068
532 Ga0207428_10023023
533 Ga0207428_10027171
534 Ga0268266_10007237
535 Ga0268266_10025331
536 Ga0268266_10358770
537 Ga0268265_10098227
538 Ga0307408_100026220
539 Ga0307405_10152799
540 Ga0307405_10219843
541 Ga0307405_10346199
542 Ga0307413_10163776
543 Ga0307410_10103403
544 Ga0307406_10141156
545 Ga0307412_10026509
546 Ga0307412_10030128
547 Ga0307412_10244365
548 Ga0307409_100054376
549 Ga0307409_100179487
550 Ga0307416_100041660
551 Ga0307416_100052559
552 Ga0307416_100217096
553 Ga0307416_100438414
554 Ga0307414_10038728
555 Ga0307411_10045125
556 Ga0373948_0001374
557 Ga0373959_0001437
558 Ga0373938_0000670
559 Ga0373928_0011748
560 Ga0373929_0000990
561 Ga0373940_0000344
562 Ga0373949_0001028
563 Ga0373952_0000050
564 Ga0373932_0001217
565 Ga0373939_0000156
566 Ga0373946_0039917
567 Ga0373942_0001569
568 Ga0373961_0001988
569 Ga0373962_0000398
570 Ga0373931_0000411
571 Ga0373947_0005679
572 Ga0373947_0071509
573 Ga0373937_0256915
574 Ga0439453_0001187
575 Ga0439446_0026633
576 Ga0439446_0029921
577 Ga0439464_0000538
578 Ga0439464_0013506
579 Ga0451577_0010402
580 Ga0466959_0053755
581 Ga0451576_0072441
582 Ga0451576_0252606
583 Ga0466958_0129514
584 Ga0466967_0182510
585 Ga0495629_0069695
586 Ga0495629_0089781
587 Ga0495582_0104971
588 Ga0495587_0153801
589 Ga0495645_0001334
590 Ga0495635_0169359
591 Ga0495658_0078821
592 Ga0496108_0118509
593 Ga0496110_0031221
594 Ga0496112_0006961
595 Ga0496112_0077332
596 Ga0496112_0078040
597 Ga0496114_0015512
598 Ga0496114_0072444
599 Ga0496115_0034581
600 Ga0501036_0112588
601 Ga0501036_0259375
602 Ga0501039_0033215
603 Ga0501039_0039156
604 Ga0501039_0081207
605 Ga0501040_0069607
606 Ga0501040_0249993
607 Ga0501041_0087911
608 Ga0501041_0172797
609 Ga0501042_0231410
610 Ga0501046_0190063
611 Ga0501048_0013600
612 Ga0501048_0166586
613 Ga0501071_0001911
614 Ga0501071_0022795
615 Ga0501071_0086591
616 Ga0501072_0065932
617 Ga0501073_0001122
618 Ga0501073_0035010
619 Ga0501075_0010318
620 Ga0501075_0041554
621 Ga0501075_0043073
622 Ga0501075_0071398
623 Ga0501076_0154030
624 Ga0501076_0365382
625 Ga0501221_008996
626 Ga0501079_0186174
627 Ga0501079_0203776
628 Ga0501081_0139976
629 Ga0501081_0240972
630 Ga0501045_0022991
631 Ga0501045_0065400
632 Ga0501045_0116897
633 nmdc:mga0yw44_81300_c1
634 nmdc:mga0yw44_8418_c1
635 nmdc:mga05p37_11139_c1
636 nmdc:mga05p37_199383_c1
637 nmdc:mga05p37_21482_c1
638 nmdc:mga05p37_221_c1
639 nmdc:mga05p37_26367_c1
640 nmdc:mga05p37_299700_c1
641 nmdc:mga05p37_37061_c1
642 nmdc:mga05p37_55815_c1
643 nmdc:mga05p37_61937_c1
644 nmdc:mga05p37_8651_c1
645 nmdc:mga09592_2641_c1
646 nmdc:mga09592_266475_c1
647 nmdc:mga09592_8855_c1
648 nmdc:mga0qj67_187408_c1
649 nmdc:mga0qj67_35205_c1
650 nmdc:mga0qj67_5533_c1
651 nmdc:mga06r32_228692_c1
652 nmdc:mga06r32_38767_c1
653 nmdc:mga06r32_50898_c1
654 nmdc:mga06r32_654_c1
655 nmdc:mga08y16_30542_c1
656 nmdc:mga08y16_346702_c1
657 nmdc:mga08y16_4545_c1
658 nmdc:mga08y16_464_c1
659 nmdc:mga08y16_8901_c1
660 nmdc:mga08y16_90098_c1
661 nmdc:mga08y16_91462_c1
662 nmdc:mga0n895_111_c1
663 nmdc:mga0n895_137530_c1
664 nmdc:mga0n895_182798_c1
665 nmdc:mga0n895_20329_c1
666 nmdc:mga0n895_5089_c1
667 nmdc:mga0n895_6455_c1
668 nmdc:mga0n895_78452_c1
669 nmdc:mga0rr50_467454_c1
670 nmdc:mga0rr50_50582_c1
671 nmdc:mga0rr50_57_c1
672 nmdc:mga0rr50_63132_c1
673 nmdc:mga0rr50_9063_c1
674 nmdc:mga08x19_11626_c1
675 nmdc:mga08x19_426_c1
676 nmdc:mga08x19_44191_c1
677 nmdc:mga08x19_75971_c1
678 nmdc:mga0a205_13339_c1
679 nmdc:mga0a205_136241_c1
680 nmdc:mga0a205_44772_c1
681 nmdc:mga0a205_58090_c1
682 Ga0495619_0028279
683 Ga0495619_0042090
684 Ga0500556_0025364
685 Ga0500593_124785
686 Ga0501084_0016702
687 Ga0501084_0033832
688 Ga0590071_028669
689 Ga0590075_001527
690 Ga0501082_0181376
691 Ga0530510_0028959
692 Ga0530510_0053889

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00742

Homoserine_dh

Homoserine dehydrogenase

193

370

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5avo-assembly1.cif.gz_A crystal structure of the reduced form of homoserine dehydrogenase from sulfolobus tokodaii. 0.9336 4 344
7f4c-assembly1.cif.gz_B the crystal structure of the immature holo-enzyme of homoserine dehydrogenase complexed with nadp and 1,4-butandiol from the hyperthermophilic archaeon sulfurisphaera tokodaii. 0.9271 4 344
5x9d-assembly1.cif.gz_A-2 crystal structure of homoserine dehydrogenase in complex with l-cysteine and nad 0.9255 4 344
3ing-assembly1.cif.gz_A-2 crystal structure of homoserine dehydrogenase (np_394635.1) from thermoplasma acidophilum at 1.95 a resolution 0.9255 1 343
4ydr-assembly1.cif.gz_A crystal structure of oxidized homoserine dehydrogenase of sulfolobus tokodaii 0.9221 4 344
ID Description Score Start End Superfamily
5xdfB02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9384 175 322 3.30.360.10
af_Q2FYV4_151_297_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9334 176 320 3.30.360.10
5x9dA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9169 173 322 3.30.360.10
af_Q2FYV4_151_297_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9155 176 320 3.30.360.10
5xdfB02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9144 175 322 3.30.360.10
ID Description Score Start End GO Terms
AF-A0A2V8TQK0-F1-model_v4 homoserine dehydrogenase (EC 1.1.1.3) 0.9745 97 344 GO:0004412
GO:0009088
AF-A0A2V8Q2T9-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9638 126 345 GO:0004412
GO:0009086
GO:0009088
AF-A0A2V8TQK0-F1-model_v4 homoserine dehydrogenase (EC 1.1.1.3) 0.9631 97 344 GO:0004412
GO:0009088
AF-A0A534M1M6-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9625 112 346 GO:0004412
GO:0009086
GO:0009088
GO:0050661
AF-A0A2G4JJM2-F1-model_v4 homoserine dehydrogenase (EC 1.1.1.3) 0.961 2 344 GO:0004412
GO:0009088

Map