F416189

General Info

Members Datasets Scaffolds Average Seq Length
344 245 251 465

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2935901341|2935902813
Length 557
Sequence RTPHARAQNDFTINAPSDGIHLQPVDSQLGWPCAPHAAPCQWRGVVHPQKLTQDVATCRRLKGEQMIDQRRCFTSLFSMALSLRFVSMVRSLLLSLFALAFAQGGYWSALAADDFSLEQKRPSIKADRSQEDWSLLADPKLRNEPLDSLKYIPLFPNNPDSYISLGLNLREIFEVSDAPAFGTVPANPTDSYWLQRAQFQIDVHLNENWQLFTQFEDVRAFDKTMVSPNDANRFDLRLAFIGYTQETDLGTFRARVGRQDFAFDLERFVSVRDGPNVRQAFDAVWAGWETEAWRFYGLVSQPVHYRDDNPFDDRSSGDALFSGVRVERQLSPTIEASTYYALYQRKDATFLTASGEEDRHVLDIRSAGKYAGFDWDAEAMGQVGQVGSAGILAWAVGARTGYTFEDVPWSPRIGLQFDVASGDRDASDGTLGTFNPLFPNGFYFSLGGHTGYANLIHLKPSITVQPTEDLTLMAGAGLLWRQTTQDAVYTLPSVPVAGTAGSGPAWTGAYAQVKADYRFNPNLTGSLEAVHYQVGSALQAVGGCDSNYLRAELKLAW

Samples

Sample ID Description Type Environment
1 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
2 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
3 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
4 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
5 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
6 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
7 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
8 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
9 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
10 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
11 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
12 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
13 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
14 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
15 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
16 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
17 2597489888 Pseudomonas fluorescens SS101 Isolate Rhizosphere
18 2597489889 Pseudomonas synxantha BG33R Isolate Rhizosphere
19 2599185167 Pseudomonas sp. NFPP28 Isolate Rhizoplane
20 2599185179 Pseudomonas sp. NFR09 Isolate Rhizoplane
21 2599185189 Pseudomonas sp. NFPP02 Isolate Rhizoplane
22 2599185190 Pseudomonas sp. NFPP04 Isolate Rhizoplane
23 2599185191 Pseudomonas sp. NFPP24 Isolate Rhizoplane
24 2599185288 Pseudomonas sp. NFACC25 Isolate Rhizoplane
25 2599185290 Pseudomonas sp. NFPP11 Isolate Rhizoplane
26 2599185303 Pseudomonas sp. NFACC42-2 Isolate Rhizoplane
27 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
28 2600255296 Pseudomonas sp. NFR02 Isolate Rhizoplane
29 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
30 2619619299 Pseudomonas veronii R4 Genome sequencing Isolate Unclassified
31 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
32 2643221582 Rhizobium sp. Root651 Isolate Unclassified
33 2643221713 Pseudomonas sp. Root9 Isolate Unclassified
34 2675903420 Pseudomonas fluorescens Ps006 Isolate Unclassified
35 2721755607 Pseudomonas fluorescens Pt14 Isolate Rhizosphere
36 2738541265 Pseudomonas sp. GV077 Isolate Unclassified
37 2738541282 Pseudomonas sp. GV058 Isolate Unclassified
38 2738541294 Pseudomonas sp. GV087 Isolate Unclassified
39 2738541303 Pseudomonas sp. GV105 Isolate Unclassified
40 2738541309 Pseudomonas sp. GV047 Isolate Unclassified
41 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
42 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
43 2808606385 Pseudomonas sp. SJZ103 Isolate Rhizosphere
44 2808606388 Pseudomonas sp. SJZ094 Isolate Rhizosphere
45 2816332298 Pseudomonas veronii R02 Isolate Rhizosphere
46 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
47 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
48 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
49 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
50 2834028612 Pseudomonas fluorescens 513 Isolate Unclassified
51 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
52 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
53 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
54 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
55 2842826826 Pseudomonas sp. R-72172 Isolate Unclassified
56 2842837860 Pseudomonas sp. R-72102 Isolate Unclassified
57 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
58 2852612431 Pseudomonas sp. SJZ073 Isolate Rhizosphere
59 2852667396 Pseudomonas sp. JAI120 Isolate Rhizosphere
60 2860867994 Pseudomonas sp. R1-43-08 Isolate Rhizosphere
61 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
62 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
63 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
64 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
65 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
66 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
67 2906610324
68 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
69 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
70 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
71 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
72 2931390751 Pseudomonas sp. DR208 Isolate Rhizosphere
73 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
74 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
75 2945928738 Pseudomonas cedrina W1I11 Isolate Rhizosphere
76 2946006987 Pseudomonas sp. W3I7 Isolate Rhizosphere
77 2946027586 Pseudomonas sp. W4I3 Isolate Rhizosphere
78 2947233263 Pseudomonas synxantha W2I4 Isolate Rhizosphere
79 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
80 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
81 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
82 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
83 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
84 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
85 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
86 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
87 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
88 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
89 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
90 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
91 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
92 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
93 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
94 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
95 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
96 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
97 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
98 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
99 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
100 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
101 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
102 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
103 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
104 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
105 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
106 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
107 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
108 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
109 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
110 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
111 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
112 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
113 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
114 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
115 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
116 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
117 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
118 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
119 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
120 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
121 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
122 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
123 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
124 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
125 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
126 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
127 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
128 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
134 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
135 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
136 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
137 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
138 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
154 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
155 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
156 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
157 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
158 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
159 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
160 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
161 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
162 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
163 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
164 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
165 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
166 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
167 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
168 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
169 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
170 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
171 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
172 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
173 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
174 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
175 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
176 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
177 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
178 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
179 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
180 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
181 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
182 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
183 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
184 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
185 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
186 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
187 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
188 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
189 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
190 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
191 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
192 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
193 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
194 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
195 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
196 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
197 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
198 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
199 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
200 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
201 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
202 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
203 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
204 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
205 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
206 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
207 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
208 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
209 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
210 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
211 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
212 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
213 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
214 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
215 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
216 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
217 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
218 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
219 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
220 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
221 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
222 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
223 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
224 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
225 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
226 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
227 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
228 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
229 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
230 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
231 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
232 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
233 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
234 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
235 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
236 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
237 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
238 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
239 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
240 8054285046 Pseudomonas petroselini MAFF 311096 Isolate Nodule
241 8054347763 Pseudomonas carnis NWU Be30 Isolate Unclassified
242 8055817908 Pseudomonas pergaminensis 1008 Isolate Rhizosphere
243 8056131705 Pseudomonas asgharzadehiana SWRI132 Isolate Rhizosphere
244 8056148874 Pseudomonas khavaziana SWRI124 Isolate Rhizosphere
245 8056161164 Pseudomonas azadiae SWRI103 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.89
Metatranscriptomes 0
Isolates 27.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.37
Nodule 6.69
Rhizoplane 4.65
Rhizosphere 54.07
Stem 0
Stem Tuber 0
Unclassified 21.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000386 3300001979 Bacteria 18894
2 JGI25153J46596_10000447 3300003215 Bacteria 26554
3 JGI25153J46596_10002859 3300003215 Bacteria 9807
4 JGI25153J46596_10004353 3300003215 Bacteria 7642
5 rootH1_10055582 3300003316 Bacteria 3056
6 rootH1_10055582 3300003323 Bacteria 3857
7 rootH2_10074301 3300003320 Bacteria 3665
8 rootL2_10019044 3300003322 Bacteria 17479
9 rootH1_10041068 3300003323 Bacteria 4284
10 Ga0055538_1000140 3300003751 Bacteria 50617
11 Ga0055539_1000191 3300003752 Bacteria 50617
12 Ga0055533_1000191 3300003756 Bacteria 50617
13 Ga0055532_1000194 3300003758 Bacteria 50617
14 Ga0055525_1000258 3300003759 Bacteria 50617
15 Ga0055541_1000126 3300003841 Bacteria 50617
16 Ga0065165_1000134 3300005262 Bacteria 127890
17 Ga0065704_10016506 3300005289 Bacteria 1966
18 Ga0065704_10080009 3300005289 Bacteria 4030
19 Ga0065712_10076498 3300005290 Bacteria 3651
20 Ga0070670_100000170 3300005331 Bacteria 58712
21 Ga0070670_100026041 3300005331 Bacteria 5034
22 Ga0070661_100000831 3300005344 Bacteria 22200
23 Ga0070669_100003061 3300005353 Bacteria 12025
24 Ga0070669_100074407 3300005353 Bacteria 2518
25 Ga0070663_100041529 3300005455 Bacteria 3227
26 Ga0070662_100002488 3300005457 Bacteria 11356
27 Ga0070696_100043411 3300005546 Bacteria 3110
28 Ga0070664_100000996 3300005564 Bacteria 22200
29 Ga0068854_100066560 3300005578 Bacteria 2622
30 Ga0068856_100018296 3300005614 Bacteria 6793
31 Ga0068856_100087337 3300005614 Bacteria 3100
32 Ga0068851_10000188 3300005834 Bacteria 30806
33 Ga0075365_10062297 3300006038 Bacteria 2494
34 Ga0075370_10019014 3300006353 Bacteria 3733
35 Ga0075370_10054805 3300006353 Bacteria 2265
36 Ga0105251_10000046 3300009011 Bacteria 112588
37 Ga0105251_10000185 3300009011 Bacteria 62882
38 Ga0105251_10000347 3300009011 Bacteria 46060
39 Ga0105251_10005571 3300009011 Bacteria 8192
40 Ga0105251_10023454 3300009011 Bacteria 3184
41 Ga0105244_10005455 3300009036 Bacteria 8456
42 Ga0105244_10023926 3300009036 Bacteria 3340
43 Ga0105244_10031310 3300009036 Bacteria 2823
44 Ga0105250_10000230 3300009092 Bacteria 46821
45 Ga0105250_10000436 3300009092 Bacteria 30500
46 Ga0105240_10000440 3300009093 Bacteria 76796
47 Ga0105243_10146321 3300009148 Bacteria 2022
48 Ga0105243_10191221 3300009148 Bacteria 1788
49 Ga0105242_10025810 3300009176 Bacteria 4653
50 Ga0105237_10001024 3300009545 Bacteria 37600
51 Ga0105237_10012458 3300009545 Bacteria 8963
52 Ga0105239_10006206 3300010375 Bacteria 13910
53 Ga0105246_10008259 3300011119 Bacteria 6394
54 Ga0157373_10003621 3300013100 Bacteria 11666
55 Ga0157373_10018177 3300013100 Bacteria 5120
56 Ga0157373_10022718 3300013100 Bacteria 4550
57 Ga0157373_10024165 3300013100 Bacteria 4404
58 Ga0157373_10093041 3300013100 Bacteria 2123
59 Ga0157370_10003953 3300013104 Bacteria 17255
60 Ga0157370_10033749 3300013104 Bacteria 4987
61 Ga0157369_10019343 3300013105 Bacteria 7618
62 Ga0157375_10009958 3300013308 Bacteria 8358
63 Ga0182008_10000243 3300014497 Bacteria 42328
64 Ga0182008_10000445 3300014497 Bacteria 31422
65 Ga0182008_10030626 3300014497 Bacteria 2712
66 Ga0182006_1002929 3300015261 Bacteria 9048
67 Ga0182007_10001384 3300015262 Bacteria 13035
68 Ga0182005_1003697 3300015265 Bacteria 5106
69 Ga0163161_10035701 3300017792 Bacteria 3559
70 Ga0213872_10043848 3300021361 Bacteria 2037
71 Ga0209435_101217 3300025206 Bacteria 3451
72 Ga0209784_100161 3300025224 Bacteria 58895
73 Ga0209566_100213 3300025225 Bacteria 58895
74 Ga0209674_100208 3300025226 Bacteria 58895
75 Ga0209147_100249 3300025229 Bacteria 51703
76 Ga0209563_100159 3300025230 Bacteria 58895
77 Ga0209258_100438 3300025242 Bacteria 47519
78 Ga0209646_1000676 3300025246 Bacteria 12429
79 Ga0209677_100163 3300025253 Bacteria 58895
80 Ga0209677_100645 3300025253 Bacteria 18473
81 Ga0209677_106632 3300025253 Bacteria 2687
82 Ga0209233_1000139 3300025261 Bacteria 197070
83 Ga0209758_1001335 3300025297 Bacteria 29891
84 Ga0209758_1001383 3300025297 Bacteria 28887
85 Ga0209758_1005249 3300025297 Bacteria 10141
86 Ga0207656_10003038 3300025321 Bacteria 5734
87 Ga0207696_1000011 3300025711 Bacteria 530614
88 Ga0207696_1000297 3300025711 Bacteria 57833
89 Ga0207655_1000094 3300025728 Bacteria 196748
90 Ga0207655_1003063 3300025728 Bacteria 12740
91 Ga0207713_1000115 3300025735 Bacteria 132114
92 Ga0207713_1000193 3300025735 Bacteria 85067
93 Ga0207713_1002128 3300025735 Bacteria 14758
94 Ga0207713_1002416 3300025735 Bacteria 13636
95 Ga0207713_1003891 3300025735 Bacteria 9946
96 Ga0207695_10000180 3300025913 Bacteria 185504
97 Ga0207671_10000132 3300025914 Bacteria 115312
98 Ga0207671_10008342 3300025914 Bacteria 8798
99 Ga0207649_10000088 3300025920 Bacteria 77105
100 Ga0207681_10001801 3300025923 Bacteria 13741
101 Ga0207650_10000077 3300025925 Bacteria 132010
102 Ga0207650_10000357 3300025925 Bacteria 44045
103 Ga0207706_10005849 3300025933 Bacteria 11438
104 Ga0207686_10003595 3300025934 Bacteria 8310
105 Ga0207709_10078416 3300025935 Bacteria 2120
106 Ga0207679_10000034 3300025945 Bacteria 147162
107 Ga0207640_10053966 3300025981 Bacteria 2626
108 Ga0207702_10013320 3300026078 Bacteria 6840
109 Ga0209389_1000170 3300027296 Bacteria 52587
110 Ga0209371_1002171 3300027312 Bacteria 11475
111 Ga0209489_101554 3300027361 Bacteria 47275
112 Ga0209700_100041 3300027363 Bacteria 168380
113 Ga0268256_1000028 3300030500 Bacteria 433179
114 Ga0307405_10000340 3300031731 Bacteria 17412
115 Ga0307510_10012220 3300033180 Bacteria 10180
116 Ga0436361_0911512 3300039447 Bacteria 6387
117 Ga0451839_0782742 3300041496 Bacteria 3811
118 Ga0451847_0276541 3300041503 Bacteria 2296
119 Ga0451855_0446860 3300041511 Bacteria 2892
120 Ga0439432_000028 3300042006 Bacteria 48652
121 Ga0439463_000894 3300042016 Bacteria 8211
122 Ga0495627_000371 3300046453 Bacteria 41727
123 Ga0495591_000199 3300046458 Bacteria 61532
124 Ga0495591_000358 3300046458 Bacteria 39879
125 Ga0495591_004110 3300046458 Bacteria 7240
126 Ga0495591_033799 3300046458 Bacteria 1510
127 Ga0495653_0005559 3300046463 Bacteria 10276
128 Ga0495650_0006548 3300046471 Bacteria 7239
129 Ga0495650_0026902 3300046471 Bacteria 2667
130 Ga0495605_0000006 3300046474 Bacteria 361304
131 Ga0495605_0000020 3300046474 Bacteria 254765
132 Ga0495605_0000048 3300046474 Bacteria 170182
133 Ga0495585_0008593 3300046492 Bacteria 6182
134 Ga0495594_0005808 3300046499 Bacteria 6336
135 Ga0495607_0000285 3300046501 Bacteria 54090
136 Ga0495607_0002050 3300046501 Bacteria 16849
137 Ga0495607_0028766 3300046501 Bacteria 3424
138 Ga0495583_0000096 3300046506 Bacteria 151090
139 Ga0495583_0001369 3300046506 Bacteria 25106
140 Ga0495583_0003507 3300046506 Bacteria 11863
141 Ga0495606_0006137 3300046507 Bacteria 11208
142 Ga0495606_0008227 3300046507 Bacteria 9112
143 Ga0495606_0072288 3300046507 Bacteria 2168
144 Ga0495610_0028339 3300046512 Bacteria 2962
145 Ga0495620_0000001 3300046515 Bacteria 386508
146 Ga0495620_0007357 3300046515 Bacteria 5987
147 Ga0495631_0004792 3300046518 Bacteria 7133
148 Ga0495631_0006542 3300046518 Bacteria 6009
149 Ga0495632_0000794 3300046519 Bacteria 28049
150 Ga0495632_0001476 3300046519 Bacteria 19519
151 Ga0495632_0009103 3300046519 Bacteria 6008
152 Ga0495637_0001257 3300046520 Bacteria 15301
153 Ga0495637_0020398 3300046520 Bacteria 3050
154 Ga0495643_0016481 3300046522 Bacteria 4340
155 Ga0495648_0000631 3300046524 Bacteria 37603
156 Ga0495648_0015882 3300046524 Bacteria 5443
157 Ga0495609_0000012 3300046538 Bacteria 333994
158 Ga0495609_0002721 3300046538 Bacteria 10667
159 Ga0495597_0002471 3300046542 Bacteria 11672
160 Ga0495645_0102141 3300046543 Bacteria 2038
161 Ga0495633_0000034 3300046558 Bacteria 185552
162 Ga0495611_0003347 3300046648 Bacteria 7077
163 Ga0495611_0006591 3300046648 Bacteria 4946
164 Ga0495661_0000004 3300046665 Bacteria 555340
165 Ga0495661_0000095 3300046665 Bacteria 109100
166 Ga0495661_0000376 3300046665 Bacteria 48234
167 Ga0495661_0008871 3300046665 Bacteria 6931
168 Ga0495670_0015374 3300046691 Bacteria 3762
169 Ga0495670_0060916 3300046691 Bacteria 1896
170 Ga0495671_0000600 3300046692 Bacteria 26585
171 Ga0495671_0017102 3300046692 Bacteria 3860
172 Ga0495649_0000021 3300046694 Bacteria 180395
173 Ga0495589_0000500 3300046794 Bacteria 27714
174 Ga0495660_0001687 3300046810 Bacteria 14790
175 Ga0495660_0004567 3300046810 Bacteria 8359
176 Ga0495660_0018139 3300046810 Bacteria 4047
177 Ga0495674_0005340 3300047319 Bacteria 12326
178 Ga0495672_0005795 3300047320 Bacteria 9707
179 Ga0495672_0021065 3300047320 Bacteria 4257
180 Ga0495676_0000397 3300047321 Bacteria 35189
181 Ga0495683_0000034 3300047323 Bacteria 148959
182 Ga0495683_0000073 3300047323 Bacteria 101074
183 Ga0495687_004033 3300047443 Bacteria 10194
184 Ga0495679_000377 3300047446 Bacteria 34132
185 Ga0495679_000507 3300047446 Bacteria 27686
186 Ga0495673_0000572 3300047469 Bacteria 37126
187 Ga0495673_0000767 3300047469 Bacteria 30449
188 Ga0495673_0003011 3300047469 Bacteria 11345
189 Ga0495673_0009185 3300047469 Bacteria 5487
190 Ga0495673_0054009 3300047469 Bacteria 1749
191 Ga0496100_0008493 3300048903 Bacteria 5729
192 Ga0496102_0001449 3300048905 Bacteria 21013
193 Ga0496103_0002997 3300048906 Bacteria 10441
194 Ga0496104_0190162 3300048907 Bacteria 1964
195 Ga0496111_0000779 3300048914 Bacteria 17026
196 Ga0496112_0012021 3300048915 Bacteria 7940
197 Ga0496116_0048008 3300048919 Bacteria 2868
198 Ga0496117_0000790 3300048920 Bacteria 49640
199 Ga0496117_0003408 3300048920 Bacteria 18511
200 Ga0496117_0097326 3300048920 Bacteria 1875
201 Ga0496118_0003830 3300048921 Bacteria 18511
202 Ga0496118_0024837 3300048921 Bacteria 5160
203 Ga0496119_0003134 3300048922 Bacteria 17419
204 Ga0496119_0025337 3300048922 Bacteria 4145
205 Ga0496120_0007221 3300048923 Bacteria 8317
206 Ga0496120_0014727 3300048923 Bacteria 5193
207 Ga0496120_0016882 3300048923 Bacteria 4753
208 Ga0496121_0003008 3300048924 Bacteria 24483
209 Ga0496121_0025896 3300048924 Bacteria 5549
210 Ga0496121_0090064 3300048924 Bacteria 2399
211 Ga0496122_0005881 3300048925 Bacteria 14364
212 Ga0496122_0006090 3300048925 Bacteria 14052
213 Ga0496122_0006188 3300048925 Bacteria 13890
214 Ga0496122_0010951 3300048925 Bacteria 9273
215 Ga0496123_0007367 3300048926 Bacteria 10405
216 Ga0496123_0009930 3300048926 Bacteria 8491
217 Ga0496123_0022623 3300048926 Bacteria 4838
218 Ga0496124_0000132 3300048927 Bacteria 155405
219 Ga0496124_0000944 3300048927 Bacteria 46593
220 Ga0496124_0089785 3300048927 Bacteria 2508
221 Ga0496125_0001542 3300048928 Bacteria 32957
222 Ga0496125_0001808 3300048928 Bacteria 29539
223 Ga0496125_0006784 3300048928 Bacteria 12293
224 Ga0496125_0014449 3300048928 Bacteria 7687
225 Ga0496125_0045582 3300048928 Bacteria 3688
226 Ga0496126_0007003 3300048929 Bacteria 12454
227 Ga0496126_0009416 3300048929 Bacteria 10370
228 Ga0496126_0049849 3300048929 Bacteria 3820
229 Ga0495678_000049 3300049459 Bacteria 163929
230 Ga0495678_000137 3300049459 Bacteria 87580
231 Ga0495678_002700 3300049459 Bacteria 11701
232 nmdc:mga0yw44_88659_c1 3300050492 Bacteria 1951
233 nmdc:mga06z11_5391_c1 3300050494 Bacteria 5126
234 Ga0500578_0153488 3300053086 Bacteria 1433
235 Ga0500583_0045212 3300053092 Bacteria 2020
236 Ga0500566_0000160 3300053094 Bacteria 34452
237 Ga0500608_021642 3300053122 Bacteria 2974
238 Ga0500618_000804 3300053125 Bacteria 17285
239 Ga0500618_004161 3300053125 Bacteria 4723
240 Ga0500618_005787 3300053125 Bacteria 3715
241 Ga0500658_0000156 3300053134 Bacteria 32843
242 Ga0500568_0000229 3300053139 Bacteria 48135
243 Ga0500568_0009739 3300053139 Bacteria 4548
244 Ga0500573_0023113 3300053140 Bacteria 3570
245 Ga0500577_0000080 3300053142 Bacteria 22382
246 Ga0500577_0000457 3300053142 Bacteria 10554
247 Ga0500586_000601 3300053145 Bacteria 7330
248 Ga0500616_0000026 3300053153 Bacteria 454314
249 Ga0500616_0000285 3300053153 Bacteria 74186
250 Ga0500627_0025494 3300053158 Bacteria 2431
251 Ga0500636_0010749 3300053177 Bacteria 5347

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2906610324 2906615767 384
2 3300053086 Ga0500578_0153488 Ga0500578_0153488_143_1393 416
3 3300053092 Ga0500583_0045212 Ga0500583_0045212_29_1279 416
4 3300048921 Ga0496118_0024837 Ga0496118_0024837_2320_3588 422
5 3300048928 Ga0496125_0001808 Ga0496125_0001808_199_1467 422
6 3300046471 Ga0495650_0026902 Ga0495650_0026902_458_1921 427
7 3300053125 Ga0500618_000804 Ga0500618_000804_12150_13544 427
8 3300047319 Ga0495674_0005340 Ga0495674_0005340_3146_4444 432
9 3300009036 Ga0105244_10031310 Ga0105244_100313102 444
10 3300046692 Ga0495671_0017102 Ga0495671_0017102_999_2354 444
11 3300005578 Ga0068854_100066560 Ga0068854_1000665602 445
12 3300009093 Ga0105240_10000440 Ga0105240_1000044064 445
13 3300009148 Ga0105243_10146321 Ga0105243_101463212 445
14 3300009545 Ga0105237_10001024 Ga0105237_1000102427 445
15 3300010375 Ga0105239_10006206 Ga0105239_100062067 445
16 3300013104 Ga0157370_10003953 Ga0157370_1000395313 445
17 3300014497 Ga0182008_10030626 Ga0182008_100306262 445
18 3300015262 Ga0182007_10001384 Ga0182007_1000138411 445
19 3300015265 Ga0182005_1003697 Ga0182005_10036973 445
20 3300025253 Ga0209677_106632 Ga0209677_1066322 445
21 3300025261 Ga0209233_1000139 Ga0209233_100013975 445
22 3300025913 Ga0207695_10000180 Ga0207695_1000018040 445
23 3300025914 Ga0207671_10000132 Ga0207671_1000013256 445
24 3300025981 Ga0207640_10053966 Ga0207640_100539662 445
25 3300048903 Ga0496100_0008493 Ga0496100_0008493_3928_5331 445
26 3300048905 Ga0496102_0001449 Ga0496102_0001449_10161_11564 445
27 3300048906 Ga0496103_0002997 Ga0496103_0002997_6823_8226 445
28 3300048920 Ga0496117_0003408 Ga0496117_0003408_9101_10504 445
29 3300048921 Ga0496118_0003830 Ga0496118_0003830_9101_10504 445
30 3300048922 Ga0496119_0025337 Ga0496119_0025337_2470_3873 445
31 3300048923 Ga0496120_0014727 Ga0496120_0014727_3340_4743 445
32 3300048924 Ga0496121_0003008 Ga0496121_0003008_9493_10896 445
33 3300048925 Ga0496122_0006188 Ga0496122_0006188_1779_3182 445
34 3300048926 Ga0496123_0022623 Ga0496123_0022623_2985_4388 445
35 3300048928 Ga0496125_0006784 Ga0496125_0006784_5574_6977 445
36 3300048929 Ga0496126_0049849 Ga0496126_0049849_273_1676 445
37 3300005546 Ga0070696_100043411 Ga0070696_1000434112 449
38 3300005614 Ga0068856_100087337 Ga0068856_1000873372 449
39 3300046507 Ga0495606_0072288 Ga0495606_0072288_70_1500 449
40 3300053139 Ga0500568_0000229 Ga0500568_0000229_30295_31644 449
41 3300053145 Ga0500586_000601 Ga0500586_000601_5496_6932 449
42 3300053153 Ga0500616_0000285 Ga0500616_0000285_40632_41981 449
43 3300048925 Ga0496122_0006090 Ga0496122_0006090_3356_4711 451
44 3300048928 Ga0496125_0014449 Ga0496125_0014449_5340_6695 451
45 3300047469 Ga0495673_0054009 Ga0495673_0054009_24_1403 452
46 3300048914 Ga0496111_0000779 Ga0496111_0000779_5295_6707 452
47 3300048925 Ga0496122_0010951 Ga0496122_0010951_1902_3314 452
48 3300048926 Ga0496123_0007367 Ga0496123_0007367_2328_3740 452
49 3300006353 Ga0075370_10019014 Ga0075370_100190144 453
50 3300013100 Ga0157373_10022718 Ga0157373_100227183 453
51 3300046474 Ga0495605_0000020 Ga0495605_0000020_233603_234964 453
52 3300046501 Ga0495607_0000285 Ga0495607_0000285_36478_37839 453
53 3300047443 Ga0495687_004033 Ga0495687_004033_7235_8755 453
54 iso_pu_bacteria 2844533157 2844536290 453
55 3300053140 Ga0500573_0023113 Ga0500573_0023113_1228_2619 454
56 3300021361 Ga0213872_10043848 Ga0213872_100438481 455
57 3300039447 Ga0436361_0911512 Ga0436361_0911512_2925_4322 455
58 3300046474 Ga0495605_0000006 Ga0495605_0000006_25904_27283 455
59 3300046506 Ga0495583_0001369 Ga0495583_0001369_22253_23632 455
60 3300003316 rootH1_10055582 rootH1_100555822 456
61 3300003320 rootH2_10074301 rootH2_100743013 456
62 3300003322 rootL2_10019044 rootL2_1001904418 456
63 iso_pu_bacteria 2582581308 2585282125 456
64 iso_pu_bacteria 2585427527 2585534660 456
65 iso_pu_bacteria 2585427530 2585556560 456
66 iso_pu_bacteria 2818991453 2819642133 456
67 iso_pu_bacteria 2838661181 2838667414 456
68 3300046694 Ga0495649_0000021 Ga0495649_0000021_176391_177836 457
69 3300047321 Ga0495676_0000397 Ga0495676_0000397_2639_4033 457
70 3300048919 Ga0496116_0048008 Ga0496116_0048008_590_1996 457
71 iso_pu_bacteria 2643221571 2643871723 458
72 3300003751 Ga0055538_1000140 Ga0055538_100014015 459
73 3300003752 Ga0055539_1000191 Ga0055539_100019115 459
74 3300003756 Ga0055533_1000191 Ga0055533_100019115 459
75 3300003758 Ga0055532_1000194 Ga0055532_100019415 459
76 3300003759 Ga0055525_1000258 Ga0055525_100025815 459
77 3300003841 Ga0055541_1000126 Ga0055541_100012626 459
78 3300005289 Ga0065704_10016506 Ga0065704_100165062 459
79 3300005290 Ga0065712_10076498 Ga0065712_100764981 459
80 3300005331 Ga0070670_100000170 Ga0070670_10000017020 459
81 3300005331 Ga0070670_100026041 Ga0070670_1000260415 459
82 3300005344 Ga0070661_100000831 Ga0070661_10000083121 459
83 3300005353 Ga0070669_100003061 Ga0070669_1000030612 459
84 3300005457 Ga0070662_100002488 Ga0070662_1000024882 459
85 3300005564 Ga0070664_100000996 Ga0070664_1000009964 459
86 3300005834 Ga0068851_10000188 Ga0068851_1000018810 459
87 3300009011 Ga0105251_10005571 Ga0105251_100055715 459
88 3300009011 Ga0105251_10023454 Ga0105251_100234543 459
89 3300009036 Ga0105244_10005455 Ga0105244_100054553 459
90 3300009092 Ga0105250_10000436 Ga0105250_100004364 459
91 3300009176 Ga0105242_10025810 Ga0105242_100258102 459
92 3300009545 Ga0105237_10012458 Ga0105237_100124583 459
93 3300011119 Ga0105246_10008259 Ga0105246_100082596 459
94 3300013100 Ga0157373_10003621 Ga0157373_100036215 459
95 3300013100 Ga0157373_10018177 Ga0157373_100181775 459
96 3300013100 Ga0157373_10024165 Ga0157373_100241653 459
97 3300013104 Ga0157370_10033749 Ga0157370_100337493 459
98 3300013105 Ga0157369_10019343 Ga0157369_100193432 459
99 3300013308 Ga0157375_10009958 Ga0157375_100099583 459
100 3300014497 Ga0182008_10000243 Ga0182008_1000024337 459
101 3300014497 Ga0182008_10000445 Ga0182008_1000044523 459
102 3300015261 Ga0182006_1002929 Ga0182006_10029297 459
103 3300017792 Ga0163161_10035701 Ga0163161_100357011 459
104 3300025206 Ga0209435_101217 Ga0209435_1012174 459
105 3300025224 Ga0209784_100161 Ga0209784_10016125 459
106 3300025225 Ga0209566_100213 Ga0209566_10021325 459
107 3300025226 Ga0209674_100208 Ga0209674_10020825 459
108 3300025229 Ga0209147_100249 Ga0209147_10024926 459
109 3300025230 Ga0209563_100159 Ga0209563_10015925 459
110 3300025242 Ga0209258_100438 Ga0209258_10043815 459
111 3300025246 Ga0209646_1000676 Ga0209646_10006764 459
112 3300025253 Ga0209677_100163 Ga0209677_10016325 459
113 3300025321 Ga0207656_10003038 Ga0207656_100030384 459
114 3300025711 Ga0207696_1000297 Ga0207696_100029730 459
115 3300025728 Ga0207655_1003063 Ga0207655_10030637 459
116 3300025735 Ga0207713_1002128 Ga0207713_100212815 459
117 3300025735 Ga0207713_1002416 Ga0207713_10024165 459
118 3300025914 Ga0207671_10008342 Ga0207671_100083423 459
119 3300025920 Ga0207649_10000088 Ga0207649_100000884 459
120 3300025923 Ga0207681_10001801 Ga0207681_100018019 459
121 3300025925 Ga0207650_10000077 Ga0207650_1000007754 459
122 3300025925 Ga0207650_10000357 Ga0207650_1000035720 459
123 3300025933 Ga0207706_10005849 Ga0207706_100058492 459
124 3300025934 Ga0207686_10003595 Ga0207686_100035956 459
125 3300025945 Ga0207679_10000034 Ga0207679_10000034128 459
126 3300031731 Ga0307405_10000340 Ga0307405_1000034017 459
127 3300042006 Ga0439432_000028 Ga0439432_000028_15677_17068 459
128 3300046453 Ga0495627_000371 Ga0495627_000371_10686_12077 459
129 3300046458 Ga0495591_000358 Ga0495591_000358_25389_26780 459
130 3300046458 Ga0495591_033799 Ga0495591_033799_36_1433 459
131 3300046463 Ga0495653_0005559 Ga0495653_0005559_6812_8206 459
132 3300046471 Ga0495650_0006548 Ga0495650_0006548_2970_4367 459
133 3300046474 Ga0495605_0000048 Ga0495605_0000048_53723_55120 459
134 3300046492 Ga0495585_0008593 Ga0495585_0008593_2112_3506 459
135 3300046499 Ga0495594_0005808 Ga0495594_0005808_2885_4282 459
136 3300046501 Ga0495607_0028766 Ga0495607_0028766_1696_3087 459
137 3300046506 Ga0495583_0000096 Ga0495583_0000096_39917_41314 459
138 3300046507 Ga0495606_0006137 Ga0495606_0006137_2967_4361 459
139 3300046507 Ga0495606_0008227 Ga0495606_0008227_4826_6217 459
140 3300046512 Ga0495610_0028339 Ga0495610_0028339_559_1956 459
141 3300046515 Ga0495620_0000001 Ga0495620_0000001_4984_6381 459
142 3300046518 Ga0495631_0004792 Ga0495631_0004792_2741_4138 459
143 3300046519 Ga0495632_0000794 Ga0495632_0000794_1303_2694 459
144 3300046524 Ga0495648_0015882 Ga0495648_0015882_78_1475 459
145 3300046538 Ga0495609_0000012 Ga0495609_0000012_42607_44004 459
146 3300046542 Ga0495597_0002471 Ga0495597_0002471_2873_4270 459
147 3300046558 Ga0495633_0000034 Ga0495633_0000034_144308_145705 459
148 3300046648 Ga0495611_0006591 Ga0495611_0006591_2705_4102 459
149 3300046665 Ga0495661_0000004 Ga0495661_0000004_513989_515386 459
150 3300046665 Ga0495661_0000095 Ga0495661_0000095_23837_25231 459
151 3300046665 Ga0495661_0000376 Ga0495661_0000376_25400_26791 459
152 3300046691 Ga0495670_0060916 Ga0495670_0060916_422_1819 459
153 3300046794 Ga0495589_0000500 Ga0495589_0000500_25867_27258 459
154 3300046810 Ga0495660_0001687 Ga0495660_0001687_1340_2731 459
155 3300046810 Ga0495660_0004567 Ga0495660_0004567_5252_6649 459
156 3300047323 Ga0495683_0000034 Ga0495683_0000034_107837_109234 459
157 3300047446 Ga0495679_000377 Ga0495679_000377_27797_29194 459
158 3300047446 Ga0495679_000507 Ga0495679_000507_25854_27245 459
159 3300047469 Ga0495673_0009185 Ga0495673_0009185_2417_3814 459
160 3300048920 Ga0496117_0000790 Ga0496117_0000790_13221_14612 459
161 3300048920 Ga0496117_0097326 Ga0496117_0097326_190_1581 459
162 3300048923 Ga0496120_0007221 Ga0496120_0007221_2225_3616 459
163 3300048924 Ga0496121_0090064 Ga0496121_0090064_212_1603 459
164 3300048927 Ga0496124_0000944 Ga0496124_0000944_34159_35550 459
165 3300048928 Ga0496125_0045582 Ga0496125_0045582_2078_3469 459
166 3300048929 Ga0496126_0007003 Ga0496126_0007003_2286_3677 459
167 3300049459 Ga0495678_000049 Ga0495678_000049_122778_124175 459
168 3300053125 Ga0500618_005787 Ga0500618_005787_2062_3501 459
169 iso_pu_bacteria 2597489888 2597863471 459
170 iso_pu_bacteria 2597489889 2597870559 459
171 iso_pu_bacteria 2599185167 2599399395 459
172 iso_pu_bacteria 2599185179 2599454189 459
173 iso_pu_bacteria 2599185189 2599510478 459
174 iso_pu_bacteria 2599185190 2599513885 459
175 iso_pu_bacteria 2599185191 2599519066 459
176 iso_pu_bacteria 2599185288 2599883926 459
177 iso_pu_bacteria 2599185290 2599892942 459
178 iso_pu_bacteria 2599185303 2599951150 459
179 iso_pu_bacteria 2600255296 2601689203 459
180 iso_pu_bacteria 2619619299 2621299126 459
181 iso_pu_bacteria 2643221713 2644620791 459
182 iso_pu_bacteria 2721755607 2723248277 459
183 iso_pu_bacteria 2738541265 2738672283 459
184 iso_pu_bacteria 2738541282 2738750676 459
185 iso_pu_bacteria 2738541294 2738812318 459
186 iso_pu_bacteria 2738541303 2738859717 459
187 iso_pu_bacteria 2738541309 2738899640 459
188 iso_pu_bacteria 2808606385 2808980962 459
189 iso_pu_bacteria 2808606388 2808996523 459
190 iso_pu_bacteria 2816332298 2817491792 459
191 iso_pu_bacteria 2834028612 2834030375 459
192 iso_pu_bacteria 2842826826 2842830458 459
193 iso_pu_bacteria 2842837860 2842842016 459
194 iso_pu_bacteria 2852612431 2852617307 459
195 iso_pu_bacteria 2852667396 2852672574 459
196 iso_pu_bacteria 2860867994 2860870173 459
197 iso_pu_bacteria 2929189879 2929192087 459
198 iso_pu_bacteria 2931390751 2931393204 459
199 iso_pu_bacteria 2945928738 2945933979 459
200 iso_pu_bacteria 2946006987 2946009290 459
201 iso_pu_bacteria 2946027586 2946030406 459
202 iso_pu_bacteria 2947233263 2947237302 459
203 iso_pu_bacteria 8054285046 8054287876 459
204 iso_pu_bacteria 8054347763 8054351559 459
205 iso_pu_bacteria 8055817908 8055821717 459
206 iso_pu_bacteria 8056131705 8056134275 459
207 iso_pu_bacteria 8056148874 8056154161 459
208 iso_pu_bacteria 8056161164 8056166615 459
209 3300003215 JGI25153J46596_10004353 JGI25153J46596_100043536 460
210 3300009011 Ga0105251_10000347 Ga0105251_1000034724 460
211 3300009092 Ga0105250_10000230 Ga0105250_1000023024 460
212 3300025297 Ga0209758_1001335 Ga0209758_100133525 460
213 3300025711 Ga0207696_1000011 Ga0207696_1000011291 460
214 3300025735 Ga0207713_1000193 Ga0207713_100019359 460
215 3300046501 Ga0495607_0002050 Ga0495607_0002050_10576_12015 460
216 3300053134 Ga0500658_0000156 Ga0500658_0000156_28697_30103 460
217 iso_pu_bacteria 2888388044 2888388896 460
218 3300009011 Ga0105251_10000046 Ga0105251_1000004623 461
219 3300025735 Ga0207713_1000115 Ga0207713_1000115114 461
220 3300046519 Ga0495632_0001476 Ga0495632_0001476_17839_19245 461
221 3300046538 Ga0495609_0002721 Ga0495609_0002721_448_1866 461
222 3300048907 Ga0496104_0190162 Ga0496104_0190162_533_1939 461
223 iso_pu_bacteria 2643221582 2643918444 461
224 3300005289 Ga0065704_10080009 Ga0065704_100800095 462
225 3300009011 Ga0105251_10000185 Ga0105251_1000018554 462
226 3300009036 Ga0105244_10023926 Ga0105244_100239262 462
227 3300009148 Ga0105243_10191221 Ga0105243_101912212 462
228 3300025728 Ga0207655_1000094 Ga0207655_100009475 462
229 3300025735 Ga0207713_1003891 Ga0207713_10038913 462
230 3300025935 Ga0207709_10078416 Ga0207709_100784162 462
231 3300042016 Ga0439463_000894 Ga0439463_000894_3598_5007 462
232 3300046458 Ga0495591_000199 Ga0495591_000199_21177_22595 462
233 3300046458 Ga0495591_004110 Ga0495591_004110_789_2198 462
234 3300046506 Ga0495583_0003507 Ga0495583_0003507_2631_4040 462
235 3300046515 Ga0495620_0007357 Ga0495620_0007357_3730_5139 462
236 3300046518 Ga0495631_0006542 Ga0495631_0006542_2675_4084 462
237 3300046519 Ga0495632_0009103 Ga0495632_0009103_4460_5869 462
238 3300046520 Ga0495637_0001257 Ga0495637_0001257_5203_6612 462
239 3300046520 Ga0495637_0020398 Ga0495637_0020398_1483_2892 462
240 3300046522 Ga0495643_0016481 Ga0495643_0016481_620_2029 462
241 3300046524 Ga0495648_0000631 Ga0495648_0000631_31760_33169 462
242 3300046543 Ga0495645_0102141 Ga0495645_0102141_58_1476 462
243 3300046648 Ga0495611_0003347 Ga0495611_0003347_457_1866 462
244 3300046665 Ga0495661_0008871 Ga0495661_0008871_767_2176 462
245 3300046691 Ga0495670_0015374 Ga0495670_0015374_1963_3381 462
246 3300046692 Ga0495671_0000600 Ga0495671_0000600_9801_11210 462
247 3300046810 Ga0495660_0018139 Ga0495660_0018139_2339_3748 462
248 3300047320 Ga0495672_0021065 Ga0495672_0021065_194_1603 462
249 3300047469 Ga0495673_0000572 Ga0495673_0000572_31444_32853 462
250 3300047469 Ga0495673_0000767 Ga0495673_0000767_3584_4993 462
251 3300047469 Ga0495673_0003011 Ga0495673_0003011_7202_8611 462
252 3300048927 Ga0496124_0000132 Ga0496124_0000132_132210_133619 462
253 3300049459 Ga0495678_000137 Ga0495678_000137_21056_22465 462
254 3300049459 Ga0495678_002700 Ga0495678_002700_4267_5676 462
255 iso_pu_bacteria 2513237138 2513867299 462
256 iso_pu_bacteria 2599185307 2599972766 462
257 iso_pu_bacteria 2675903420 2677896496 462
258 iso_pu_bacteria 2818991448 2819610756 462
259 iso_pu_bacteria 3007419365 3007423780 462
260 iso_pu_bacteria 8005645114 8005651403 462
261 3300048928 Ga0496125_0001542 Ga0496125_0001542_9594_11033 463
262 3300053142 Ga0500577_0000457 Ga0500577_0000457_5736_7166 463
263 iso_pu_bacteria 2919408235 2919414043 463
264 iso_pu_bacteria 3005416602 3005416720 463
265 iso_pu_bacteria 8005314921 8005320636 463
266 3300005455 Ga0070663_100041529 Ga0070663_1000415292 464
267 3300027296 Ga0209389_1000170 Ga0209389_100017026 464
268 3300027361 Ga0209489_101554 Ga0209489_10155414 464
269 3300027363 Ga0209700_100041 Ga0209700_10004156 464
270 3300048915 Ga0496112_0012021 Ga0496112_0012021_2273_3688 464
271 3300048923 Ga0496120_0016882 Ga0496120_0016882_2550_3980 464
272 3300048924 Ga0496121_0025896 Ga0496121_0025896_231_1646 464
273 3300053142 Ga0500577_0000080 Ga0500577_0000080_4213_5646 464
274 3300053153 Ga0500616_0000026 Ga0500616_0000026_273193_274623 464
275 iso_pu_bacteria 2513237095 2513650383 464
276 iso_pu_bacteria 2617270742 2617383155 464
277 iso_pu_bacteria 2758568016 2758642667 464
278 iso_pu_bacteria 2840764183 2840768598 464
279 iso_pu_bacteria 2841957949 2841961790 464
280 iso_pu_bacteria 2888378607 2888381153 464
281 3300003215 JGI25153J46596_10002859 JGI25153J46596_100028593 465
282 3300005353 Ga0070669_100074407 Ga0070669_1000744071 465
283 3300025297 Ga0209758_1005249 Ga0209758_10052497 465
284 3300027312 Ga0209371_1002171 Ga0209371_10021719 465
285 3300030500 Ga0268256_1000028 Ga0268256_1000028382 465
286 3300033180 Ga0307510_10012220 Ga0307510_100122203 465
287 3300041496 Ga0451839_0782742 Ga0451839_0782742_384_1889 465
288 3300041503 Ga0451847_0276541 Ga0451847_0276541_304_1809 465
289 3300041511 Ga0451855_0446860 Ga0451855_0446860_1146_2651 465
290 3300047323 Ga0495683_0000073 Ga0495683_0000073_25405_26829 465
291 iso_pu_bacteria 2510461076 2510899937 465
292 iso_pu_bacteria 2510461076 2510900533 465
293 iso_pu_bacteria 2510917030 2511199929 465
294 iso_pu_bacteria 2513237162 2514021396 465
295 iso_pu_bacteria 2515154116 2515658042 465
296 iso_pu_bacteria 2515154134 2515737772 465
297 iso_pu_bacteria 2582581316 2585336640 465
298 iso_pu_bacteria 2585427531 2585564299 465
299 iso_pu_bacteria 2585427609 2585903219 465
300 iso_pu_bacteria 2585428125 2587978647 465
301 iso_pu_bacteria 2775507049 2776910985 465
302 iso_pu_bacteria 2842163707 2842163712 465
303 iso_pu_bacteria 2919100787 2919102244 465
304 iso_pu_bacteria 2935901341 2935902813 465
305 iso_pu_bacteria 8005307578 8005307583 465
306 iso_pu_bacteria 8005314921 8005320651 465
307 3300003215 JGI25153J46596_10000447 JGI25153J46596_1000044721 466
308 3300005262 Ga0065165_1000134 Ga0065165_100013492 466
309 3300006038 Ga0075365_10062297 Ga0075365_100622972 466
310 3300006353 Ga0075370_10054805 Ga0075370_100548052 466
311 3300025253 Ga0209677_100645 Ga0209677_1006453 466
312 3300025297 Ga0209758_1001383 Ga0209758_10013834 466
313 3300047320 Ga0495672_0005795 Ga0495672_0005795_3204_4625 466
314 3300050492 nmdc:mga0yw44_88659_c1 nmdc:mga0yw44_88659_c1_80_1510 466
315 3300050494 nmdc:mga06z11_5391_c1 nmdc:mga06z11_5391_c1_2851_4281 466
316 3300053094 Ga0500566_0000160 Ga0500566_0000160_18525_19946 466
317 3300053122 Ga0500608_021642 Ga0500608_021642_975_2396 466
318 3300053139 Ga0500568_0009739 Ga0500568_0009739_2858_4279 466
319 3300053158 Ga0500627_0025494 Ga0500627_0025494_93_1514 466
320 iso_pu_bacteria 2517572143 2517887922 466
321 iso_pu_bacteria 2816332527 2818238952 466
322 iso_pu_bacteria 2824661429 2824665240 466
323 iso_pu_bacteria 2881364244 2881370462 466
324 iso_pu_bacteria 2885366525 2885367164 466
325 iso_pu_bacteria 2903748898 2903751121 466
326 iso_pu_bacteria 2903768456 2903773603 466
327 iso_pu_bacteria 2906626472 2906631868 466
328 iso_pu_bacteria 2935916978 2935918213 466
329 iso_pu_bacteria 8019555841 8019563366 466
330 iso_pu_bacteria 8019565922 8019573446 466
331 3300001979 JGI24740J21852_10000386 JGI24740J21852_1000038612 467
332 3300003323 rootH1_10041068 rootH1_100410682 467
333 3300005614 Ga0068856_100018296 Ga0068856_1000182962 467
334 3300013100 Ga0157373_10093041 Ga0157373_100930412 467
335 3300026078 Ga0207702_10013320 Ga0207702_100133202 467
336 3300048922 Ga0496119_0003134 Ga0496119_0003134_11295_12698 467
337 3300048925 Ga0496122_0005881 Ga0496122_0005881_960_2363 467
338 3300048926 Ga0496123_0009930 Ga0496123_0009930_1081_2484 467
339 3300048927 Ga0496124_0089785 Ga0496124_0089785_548_1951 467
340 3300048929 Ga0496126_0009416 Ga0496126_0009416_6153_7661 467
341 3300053125 Ga0500618_004161 Ga0500618_004161_931_2382 467
342 3300053177 Ga0500636_0010749 Ga0500636_0010749_1972_3375 467
343 iso_pu_bacteria 2582581315 2585327015 467
344 iso_pu_bacteria 8005484373 8005486312 467

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13372

Alginate_exp

Alginate export

161

552

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xnk-assembly1.cif.gz_A x-ray structure of alge1 0.7354 76 467
5iyu-assembly1.cif.gz_A alge_cim 0.721 76 467
7acg-assembly1.cif.gz_A in meso structure of the alginate exporter, alge, from pseudomonas aeruginosa in 9.8 monoacylglycerol 0.7197 76 467
5d5d-assembly1.cif.gz_A in meso in situ serial x-ray crystallography structure of alge at 100 k 0.7188 76 467
3szd-assembly2.cif.gz_A crystal structure of pseudomonas aeruginosa occk2 (opdf) 0.7099 74 466
ID Description Score Start End Superfamily
3sybA00 Mainly Beta;Beta Barrel;Porin;Porin 0.6772 59 467 2.40.160.10
3rbhB00 Mainly Beta;Beta Barrel;Porin; 0.6737 76 467 2.40.160.100
5dl7A00 Mainly Beta;Beta Barrel;Porin;Porin 0.6714 74 467 2.40.160.10
3t24B01 Mainly Beta;Beta Barrel;Porin;Porin 0.6679 74 467 2.40.160.10
5dl8A00 Mainly Beta;Beta Barrel;Porin;Porin 0.6659 74 467 2.40.160.10
ID Description Score Start End GO Terms
AF-A0A7W6UM50-F1-model_v4 Alginate export domain-containing protein 0.9745 365 467
AF-R7XJP0-F1-model_v4 Alginate export domain-containing protein 0.9586 367 465
AF-K5ZQG3-F1-model_v4 Alginate export domain-containing protein 0.9393 38 467
AF-A0A6L5QDJ7-F1-model_v4 Alginate export family protein 0.9359 23 467
AF-K5ZQG3-F1-model_v4 Alginate export domain-containing protein 0.933 38 467

Feature Viewer

pLDDT pTM Quality
81.71 0.78 High
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Predicted Structure (AlphaFold2)

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